Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073963.t1 | XP_003609483.1 | 94.7 | 468 | 25 | 0 | 1 | 468 | 1 | 468 | 3.50E-254 | 887.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073963.t1 | Q9SZ45 | 55.6 | 446 | 163 | 6 | 29 | 445 | 31 | 470 | 2.7e-125 | 450.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073963.t1 | G7JGM0 | 94.7 | 468 | 25 | 0 | 1 | 468 | 1 | 468 | 2.6e-254 | 887.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene073963 | 0.831799 | 1.36E-55 | -1.69E-46 |
| MS.gene049173 | MS.gene073963 | 0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene073963 | 0.857173 | 1.96E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene073963 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene073963 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene073963 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene073963 | 0.837045 | 6.55E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene073963 | 0.844516 | 7.20E-59 | -1.69E-46 |
| MS.gene049396 | MS.gene073963 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene073963 | 0.826849 | 2.16E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene073963 | 0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene073963 | 0.84262 | 2.31E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene073963 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene073963 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene073963 | 0.860736 | 1.68E-63 | -1.69E-46 |
| MS.gene050076 | MS.gene073963 | 0.818762 | 1.65E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene073963 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene073963 | -0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene073963 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene073963 | 0.811004 | 8.70E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene073963 | 0.800166 | 1.64E-48 | -1.69E-46 |
| MS.gene05053 | MS.gene073963 | 0.820938 | 5.26E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene073963 | 0.819164 | 1.34E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene073963 | 0.810923 | 9.06E-51 | -1.69E-46 |
| MS.gene050686 | MS.gene073963 | 0.840026 | 1.11E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene073963 | 0.821837 | 3.27E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene073963 | 0.827644 | 1.40E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene073963 | 0.830675 | 2.57E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene073963 | 0.853466 | 2.35E-61 | -1.69E-46 |
| MS.gene050950 | MS.gene073963 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene073963 | 0.856896 | 2.36E-62 | -1.69E-46 |
| MS.gene051113 | MS.gene073963 | -0.814557 | 1.45E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene073963 | 0.806861 | 6.70E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene073963 | 0.822947 | 1.80E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene073963 | 0.842724 | 2.17E-58 | -1.69E-46 |
| MS.gene051605 | MS.gene073963 | 0.805735 | 1.16E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene073963 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene073963 | 0.843629 | 1.25E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene073963 | 0.806781 | 6.96E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene073963 | 0.857526 | 1.54E-62 | -1.69E-46 |
| MS.gene051877 | MS.gene073963 | 0.824885 | 6.33E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene073963 | 0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene073963 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene073963 | 0.850426 | 1.71E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene073963 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene073963 | 0.852285 | 5.10E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene073963 | 0.833422 | 5.38E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene073963 | 0.841717 | 4.01E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene073963 | 0.859886 | 3.03E-63 | -1.69E-46 |
| MS.gene052481 | MS.gene073963 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene073963 | 0.845963 | 2.92E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene073963 | 0.832563 | 8.80E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene073963 | 0.826321 | 2.89E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene073963 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene073963 | 0.802798 | 4.73E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene073963 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene05296 | MS.gene073963 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene073963 | 0.813185 | 2.91E-51 | -1.69E-46 |
| MS.gene053018 | MS.gene073963 | 0.801133 | 1.04E-48 | -1.69E-46 |
| MS.gene053103 | MS.gene073963 | 0.871387 | 7.11E-67 | -1.69E-46 |
| MS.gene053104 | MS.gene073963 | 0.844593 | 6.87E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene073963 | 0.823874 | 1.09E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene073963 | 0.806901 | 6.57E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene073963 | 0.829337 | 5.45E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene073963 | 0.818021 | 2.44E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene073963 | 0.851715 | 7.41E-61 | -1.69E-46 |
| MS.gene053384 | MS.gene073963 | 0.802994 | 4.31E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene073963 | 0.841924 | 3.54E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene073963 | 0.819362 | 1.21E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene073963 | 0.854636 | 1.08E-61 | -1.69E-46 |
| MS.gene053758 | MS.gene073963 | 0.813545 | 2.42E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene073963 | 0.843854 | 1.08E-58 | -1.69E-46 |
| MS.gene053912 | MS.gene073963 | 0.841073 | 5.93E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene073963 | 0.839821 | 1.26E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene073963 | 0.808735 | 2.68E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene073963 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene073963 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene073963 | 0.807879 | 4.07E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene073963 | 0.822901 | 1.85E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene073963 | 0.818351 | 2.05E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene073963 | 0.818061 | 2.39E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene073963 | 0.819783 | 9.69E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene073963 | 0.806205 | 9.21E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene073963 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene073963 | 0.818678 | 1.73E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene073963 | 0.882429 | 1.05E-70 | -1.69E-46 |
| MS.gene055206 | MS.gene073963 | 0.858928 | 5.88E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene073963 | 0.813745 | 2.19E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene073963 | 0.81538 | 9.52E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene073963 | 0.814176 | 1.76E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene073963 | 0.801621 | 8.26E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene073963 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene073963 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene073963 | 0.821885 | 3.18E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene073963 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene073963 | 0.809783 | 1.60E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene073963 | 0.83969 | 1.36E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene073963 | 0.854063 | 1.58E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene073963 | 0.811812 | 5.80E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene073963 | 0.81213 | 4.95E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene073963 | 0.852099 | 5.76E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene073963 | 0.834227 | 3.39E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene073963 | 0.809418 | 1.91E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene073963 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene073963 | 0.806586 | 7.66E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene073963 | 0.84874 | 5.06E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene073963 | 0.819674 | 1.03E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene073963 | 0.81684 | 4.49E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene073963 | 0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene073963 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene073963 | 0.85873 | 6.74E-63 | -1.69E-46 |
| MS.gene056549 | MS.gene073963 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene073963 | 0.837097 | 6.35E-57 | -1.69E-46 |
| MS.gene056611 | MS.gene073963 | 0.804658 | 1.94E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene073963 | 0.819672 | 1.03E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene073963 | 0.853867 | 1.80E-61 | -1.69E-46 |
| MS.gene056946 | MS.gene073963 | 0.801384 | 9.24E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene073963 | 0.82457 | 7.51E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene073963 | 0.846978 | 1.55E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene073963 | 0.839023 | 2.03E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene073963 | 0.862121 | 6.34E-64 | -1.69E-46 |
| MS.gene057285 | MS.gene073963 | 0.806567 | 7.73E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene073963 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene073963 | 0.811182 | 7.95E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene073963 | 0.857058 | 2.11E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene073963 | 0.813068 | 3.09E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene073963 | 0.827134 | 1.85E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene073963 | 0.842456 | 2.56E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene073963 | 0.800504 | 1.40E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene073963 | 0.82866 | 7.95E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene073963 | 0.841726 | 3.99E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene073963 | 0.802754 | 4.83E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene073963 | 0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene073963 | 0.832333 | 1.00E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene073963 | 0.824328 | 8.57E-54 | -1.69E-46 |
| MS.gene058459 | MS.gene073963 | 0.832198 | 1.08E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene073963 | 0.840837 | 6.83E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene073963 | 0.800665 | 1.30E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene073963 | -0.811428 | 7.04E-51 | -1.69E-46 |
| MS.gene058903 | MS.gene073963 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene073963 | 0.849758 | 2.63E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene073963 | 0.809906 | 1.50E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene073963 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene073963 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene073963 | 0.829664 | 4.54E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene073963 | 0.856252 | 3.65E-62 | -1.69E-46 |
| MS.gene059366 | MS.gene073963 | 0.814439 | 1.54E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene073963 | 0.80717 | 5.76E-50 | -1.69E-46 |
| MS.gene059368 | MS.gene073963 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene073963 | 0.851843 | 6.82E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene073963 | 0.861873 | 7.55E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene073963 | 0.841465 | 4.68E-58 | -1.69E-46 |
| MS.gene059674 | MS.gene073963 | 0.834027 | 3.80E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene073963 | 0.829651 | 4.57E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene073963 | 0.803316 | 3.69E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene073963 | 0.839725 | 1.33E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene073963 | 0.832341 | 9.99E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene073963 | 0.830535 | 2.78E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene073963 | 0.888863 | 4.05E-73 | -1.69E-46 |
| MS.gene059718 | MS.gene073963 | 0.823932 | 1.06E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene073963 | 0.811533 | 6.67E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene073963 | 0.85388 | 1.78E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene073963 | 0.840328 | 9.29E-58 | -1.69E-46 |
| MS.gene059974 | MS.gene073963 | 0.808611 | 2.84E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene073963 | 0.822539 | 2.24E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene073963 | 0.819038 | 1.43E-52 | -1.69E-46 |
| MS.gene060727 | MS.gene073963 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene06074 | MS.gene073963 | -0.802153 | 6.42E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene073963 | 0.878464 | 2.75E-69 | -1.69E-46 |
| MS.gene060818 | MS.gene073963 | 0.877697 | 5.11E-69 | -1.69E-46 |
| MS.gene060835 | MS.gene073963 | 0.824987 | 5.99E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene073963 | 0.86037 | 2.17E-63 | -1.69E-46 |
| MS.gene060981 | MS.gene073963 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene073963 | 0.878223 | 3.34E-69 | -1.69E-46 |
| MS.gene061134 | MS.gene073963 | 0.82791 | 1.21E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene073963 | 0.873697 | 1.20E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073963.t1 | MTR_4g116190 | 96.795 | 468 | 15 | 0 | 1 | 468 | 1 | 468 | 0.0 | 938 |
| MS.gene073963.t1 | MTR_1g012850 | 63.923 | 413 | 136 | 7 | 62 | 463 | 43 | 453 | 0.0 | 521 |
| MS.gene073963.t1 | MTR_3g106550 | 59.259 | 405 | 156 | 6 | 63 | 464 | 47 | 445 | 1.25e-163 | 470 |
| MS.gene073963.t1 | MTR_3g106550 | 61.032 | 349 | 130 | 4 | 62 | 410 | 46 | 388 | 3.43e-142 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073963.t1 | AT4G32060 | 62.222 | 405 | 129 | 5 | 64 | 445 | 67 | 470 | 1.49e-174 | 499 |
| MS.gene073963.t1 | AT4G32060 | 62.331 | 369 | 115 | 5 | 64 | 409 | 67 | 434 | 6.09e-154 | 445 |
Find 83 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTATGGAAAAGTTAA+TGG | 0.221348 | 8.3:+9900188 | MS.gene073963:CDS |
| CCTTTCATCACCACCATTTC+CGG | 0.227693 | 8.3:-9898107 | None:intergenic |
| TTGGGACCACCTTAGGCTTT+TGG | 0.283646 | 8.3:+9898182 | MS.gene073963:CDS |
| GAAGACATTTCCTCACGTTT+TGG | 0.303320 | 8.3:+9900474 | MS.gene073963:CDS |
| TGCAAAATCCTTGGCCGAAA+TGG | 0.315325 | 8.3:-9900000 | None:intergenic |
| TTAAGAGGGGAACAGTTTCC+CGG | 0.335893 | 8.3:+9899096 | MS.gene073963:CDS |
| GCCACTGAAAAGCTGGATTC+TGG | 0.336535 | 8.3:-9899350 | None:intergenic |
| GTGAAAACACCGATAGAAAA+TGG | 0.353884 | 8.3:+9899620 | MS.gene073963:CDS |
| TTTCTTAGGACAATAACTTC+TGG | 0.357278 | 8.3:+9898148 | MS.gene073963:CDS |
| TGGTCATCTTTATCTTCTCC+TGG | 0.361095 | 8.3:+9898208 | MS.gene073963:CDS |
| AAATCCAAGTTTCTCTTCAA+TGG | 0.378137 | 8.3:+9898301 | MS.gene073963:CDS |
| TTCTTAGGACAATAACTTCT+GGG | 0.389196 | 8.3:+9898149 | MS.gene073963:CDS |
| CTTCTGGGACTGTGGTTGTT+GGG | 0.392623 | 8.3:+9898164 | MS.gene073963:CDS |
| GTGGTTGTTGGGACCACCTT+AGG | 0.398220 | 8.3:+9898175 | MS.gene073963:CDS |
| GTTAGAGAAGGTTCTTTAAG+AGG | 0.402225 | 8.3:+9899081 | MS.gene073963:CDS |
| CAATAAAAGAGGAACCATTT+CGG | 0.419212 | 8.3:+9899986 | MS.gene073963:CDS |
| TTTAAAAGCCACTGAAAAGC+TGG | 0.420902 | 8.3:-9899357 | None:intergenic |
| GATAGAAAATGGCGGTCTCT+TGG | 0.430949 | 8.3:+9899631 | MS.gene073963:CDS |
| TCTCTGGCCATATTCAGTTA+TGG | 0.434138 | 8.3:+9900176 | MS.gene073963:CDS |
| TGGAAAAGTTAATGGAGTAT+TGG | 0.435781 | 8.3:+9900196 | MS.gene073963:CDS |
| TGTTTGATATTGACAGTAAC+GGG | 0.436083 | 8.3:+9899381 | MS.gene073963:CDS |
| ACATAAACAAACTGCTGGAT+AGG | 0.437978 | 8.3:+9900054 | MS.gene073963:CDS |
| TAGCATAATCAGAGAAAGAA+TGG | 0.443313 | 8.3:-9898246 | None:intergenic |
| CTCTTTGACACAAATAATGA+TGG | 0.456116 | 8.3:+9899153 | MS.gene073963:CDS |
| TAATCACATAAACAAACTGC+TGG | 0.470159 | 8.3:+9900049 | MS.gene073963:CDS |
| ACTTCTGGGACTGTGGTTGT+TGG | 0.473411 | 8.3:+9898163 | MS.gene073963:CDS |
| CAAGGATAGTGCAAAATCCT+TGG | 0.474280 | 8.3:-9900009 | None:intergenic |
| GATTCAGAAGGAGGAAATAC+AGG | 0.475894 | 8.3:-9899051 | None:intergenic |
| CCGGAAATGGTGGTGATGAA+AGG | 0.477987 | 8.3:+9898107 | MS.gene073963:CDS |
| AGACAAAAGAATTACGTTTG+AGG | 0.485400 | 8.3:+9900109 | MS.gene073963:CDS |
| TCGAGTACTTTGCATCGAAT+CGG | 0.486747 | 8.3:+9898974 | MS.gene073963:CDS |
| AAGAGGAACCATTTCGGCCA+AGG | 0.487222 | 8.3:+9899992 | MS.gene073963:CDS |
| CACTATGATCACAATAAAAG+AGG | 0.488832 | 8.3:+9899975 | MS.gene073963:CDS |
| GTTACCATTGAAGAGAAACT+TGG | 0.490627 | 8.3:-9898305 | None:intergenic |
| CTTGCAAAGTCCTCCAGAAA+AGG | 0.491838 | 8.3:+9898843 | MS.gene073963:CDS |
| TGTTGGTTGAACTGTGTAAA+GGG | 0.494222 | 8.3:+9900516 | MS.gene073963:CDS |
| GAAGTTGCAGTCCTTCTCTC+TGG | 0.500761 | 8.3:+9900160 | MS.gene073963:CDS |
| GACAATAACTTCTGGGACTG+TGG | 0.505115 | 8.3:+9898156 | MS.gene073963:CDS |
| TTAGAGAAGGTTCTTTAAGA+GGG | 0.506873 | 8.3:+9899082 | MS.gene073963:CDS |
| TGTTATGTCGTAGAGTCTGT+TGG | 0.508095 | 8.3:-9898012 | None:intergenic |
| ATGACGTGGTGCGTTGTGAT+TGG | 0.519972 | 8.3:-9898051 | None:intergenic |
| CACAGAGACGGACGACGCCT+CGG | 0.527556 | 8.3:+9899596 | MS.gene073963:CDS |
| CGGAAATGGTGGTGATGAAA+GGG | 0.529236 | 8.3:+9898108 | MS.gene073963:CDS |
| GTCTTTGATGCTAACCGTGA+TGG | 0.529666 | 8.3:+9900408 | MS.gene073963:CDS |
| TTGGGAATTTGATAACATGT+TGG | 0.531352 | 8.3:+9900499 | MS.gene073963:CDS |
| TTTGCATCGAATCGGATCCC+TGG | 0.540228 | 8.3:+9898982 | MS.gene073963:CDS |
| AGACTCTACGACATAACATA+AGG | 0.546354 | 8.3:+9898017 | MS.gene073963:CDS |
| ATGTTTGATATTGACAGTAA+CGG | 0.548784 | 8.3:+9899380 | MS.gene073963:CDS |
| ATGGCACGCATCAAATCTGC+AGG | 0.550914 | 8.3:-9899024 | None:intergenic |
| GGATCGCATTCTAACGAGCC+GGG | 0.556208 | 8.3:-9899114 | None:intergenic |
| CATAAACAAACTGCTGGATA+GGG | 0.559819 | 8.3:+9900055 | MS.gene073963:CDS |
| AGGATCGCATTCTAACGAGC+CGG | 0.567310 | 8.3:-9899115 | None:intergenic |
| TTTCTCTGATTATGCTACTG+AGG | 0.570594 | 8.3:+9898252 | MS.gene073963:CDS |
| TGGAAAGAGTTATTAGCACC+AGG | 0.582088 | 8.3:-9898226 | None:intergenic |
| GAATCAAGACGTGTTAGAGA+AGG | 0.583261 | 8.3:+9899069 | MS.gene073963:CDS |
| ATGTTGGTTGAACTGTGTAA+AGG | 0.593116 | 8.3:+9900515 | MS.gene073963:CDS |
| ACTGAATATGGCCAGAGAGA+AGG | 0.593953 | 8.3:-9900171 | None:intergenic |
| GAATCGGATCCCTGGTGGCG+AGG | 0.604717 | 8.3:+9898990 | MS.gene073963:CDS |
| GGAAGAATTCAAGAAAGTGA+TGG | 0.607415 | 8.3:+9899538 | MS.gene073963:CDS |
| CAAGGGGCTAACCACAGAGA+CGG | 0.611869 | 8.3:+9899584 | MS.gene073963:CDS |
| TGCGATCTCAAAACAGACAA+GGG | 0.611915 | 8.3:+9899567 | MS.gene073963:CDS |
| TGACCAATACCAAAAGCCTA+AGG | 0.612300 | 8.3:-9898191 | None:intergenic |
| TAGAGAAGGTTCTTTAAGAG+GGG | 0.613134 | 8.3:+9899083 | MS.gene073963:CDS |
| ACACGTCTTGATTCAGAAGG+AGG | 0.614124 | 8.3:-9899060 | None:intergenic |
| CTAACACGTCTTGATTCAGA+AGG | 0.614135 | 8.3:-9899063 | None:intergenic |
| TCTTTGATGCTAACCGTGAT+GGG | 0.618328 | 8.3:+9900409 | MS.gene073963:CDS |
| TGTCAACAGGGAAATAGACA+TGG | 0.623190 | 8.3:+9899517 | MS.gene073963:intron |
| AGGAGGAAATACAGGAACAA+TGG | 0.629403 | 8.3:-9899043 | None:intergenic |
| CGGAGAAGAAGACGATGACG+TGG | 0.631999 | 8.3:-9898065 | None:intergenic |
| TTTGATGGGTCCGGAAATGG+TGG | 0.634496 | 8.3:+9898097 | MS.gene073963:CDS |
| CTTAAGACAACTGCATGATG+AGG | 0.635950 | 8.3:+9899712 | MS.gene073963:CDS |
| ATGCGATCTCAAAACAGACA+AGG | 0.640169 | 8.3:+9899566 | MS.gene073963:CDS |
| ATTCCCAAATCCAAAACGTG+AGG | 0.644135 | 8.3:-9900484 | None:intergenic |
| AATGTCTGCAGATGCAACCA+AGG | 0.647906 | 8.3:-9900027 | None:intergenic |
| GCATCGAATCGGATCCCTGG+TGG | 0.649676 | 8.3:+9898985 | MS.gene073963:CDS |
| CGAGGCGTCGTCCGTCTCTG+TGG | 0.649932 | 8.3:-9899595 | None:intergenic |
| CGTTGTGATTGGCTACACAA+CGG | 0.666146 | 8.3:-9898040 | None:intergenic |
| TTGCACTTAAGCTCCCATCA+CGG | 0.666778 | 8.3:-9900422 | None:intergenic |
| TGTAATGTCATGTAGGTATG+CGG | 0.675183 | 8.3:+9900345 | MS.gene073963:intron |
| GACCCATCAAAAGAGCTCAA+CGG | 0.680319 | 8.3:-9898085 | None:intergenic |
| CCAATACCAAAAGCCTAAGG+TGG | 0.680665 | 8.3:-9898188 | None:intergenic |
| GCGATCTCAAAACAGACAAG+GGG | 0.683071 | 8.3:+9899568 | MS.gene073963:CDS |
| AAAACACCGATAGAAAATGG+CGG | 0.745164 | 8.3:+9899623 | MS.gene073963:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTAATTGTTAATTTATT+TGG | + | chr8.3:9898727-9898746 | MS.gene073963:intron | 10.0% |
| !! | AATTGTTAATTTATTTGGTT+TGG | + | chr8.3:9898732-9898751 | MS.gene073963:intron | 15.0% |
| !! | AGATGAATAACTTATTATTA+CGG | + | chr8.3:9900317-9900336 | MS.gene073963:intron | 15.0% |
| !! | TGCATATTATAATTTATTTG+AGG | + | chr8.3:9899784-9899803 | MS.gene073963:intron | 15.0% |
| !!! | AATATATTTTTAGGCATAAT+AGG | - | chr8.3:9900267-9900286 | None:intergenic | 15.0% |
| !!! | ACTACTGTAAATATATTTTT+AGG | - | chr8.3:9900276-9900295 | None:intergenic | 15.0% |
| !!! | ATAACAAAATATCTTGTTTT+TGG | + | chr8.3:9899289-9899308 | MS.gene073963:intron | 15.0% |
| !!! | ATATATTTTTAGGCATAATA+GGG | - | chr8.3:9900266-9900285 | None:intergenic | 15.0% |
| !!! | TAGTATTAAAATTGCTTTTT+GGG | + | chr8.3:9898440-9898459 | MS.gene073963:intron | 15.0% |
| !!! | TATCAATTTAAAGCTAATTT+AGG | - | chr8.3:9898497-9898516 | None:intergenic | 15.0% |
| !!! | TATTTTTTATAGACAAATGT+TGG | + | chr8.3:9898641-9898660 | MS.gene073963:intron | 15.0% |
| !!! | TTAGTATTAAAATTGCTTTT+TGG | + | chr8.3:9898439-9898458 | MS.gene073963:intron | 15.0% |
| !! | AAATTATAATATGCAGATCT+TGG | - | chr8.3:9899779-9899798 | None:intergenic | 20.0% |
| !! | TAATTTAGGAAGAAAACATT+AGG | - | chr8.3:9898483-9898502 | None:intergenic | 20.0% |
| !! | TGTCATATTAAAACATTCAA+TGG | - | chr8.3:9898934-9898953 | None:intergenic | 20.0% |
| !! | TTTGAATCTGTTACTATATA+TGG | + | chr8.3:9898366-9898385 | MS.gene073963:intron | 20.0% |
| !!! | AAAAATCTTTTCAATCTTCA+AGG | - | chr8.3:9899856-9899875 | None:intergenic | 20.0% |
| !!! | AATTGATAATCATAGGTTTT+TGG | + | chr8.3:9898509-9898528 | MS.gene073963:intron | 20.0% |
| !!! | AGCTTTAAATTGATAATCAT+AGG | + | chr8.3:9898502-9898521 | MS.gene073963:intron | 20.0% |
| !!! | AGTATTAAAATTGCTTTTTG+GGG | + | chr8.3:9898441-9898460 | MS.gene073963:intron | 20.0% |
| !!! | ATATCTTTATGTTTCTGTTT+TGG | + | chr8.3:9898769-9898788 | MS.gene073963:intron | 20.0% |
| !!! | GAATTTTACAAGATAACTTT+TGG | + | chr8.3:9899890-9899909 | MS.gene073963:intron | 20.0% |
| ! | AATTAAACTGCAAGAATTCA+TGG | - | chr8.3:9898716-9898735 | None:intergenic | 25.0% |
| ! | AATTCCATCAATAAAACTGA+AGG | - | chr8.3:9899473-9899492 | None:intergenic | 25.0% |
| ! | ACACTATTGAATTGAATACT+TGG | + | chr8.3:9898579-9898598 | MS.gene073963:intron | 25.0% |
| ! | ATGTTTGATATTGACAGTAA+CGG | + | chr8.3:9899380-9899399 | MS.gene073963:CDS | 25.0% |
| ! | ATTGAATACTTGGAATATGA+AGG | + | chr8.3:9898589-9898608 | MS.gene073963:intron | 25.0% |
| ! | TTCAGTTATGGAAAAGTTAA+TGG | + | chr8.3:9900188-9900207 | MS.gene073963:CDS | 25.0% |
| ! | TTGAATACTTGGAATATGAA+GGG | + | chr8.3:9898590-9898609 | MS.gene073963:intron | 25.0% |
| !! | AACTTTTCCATAACTGAATA+TGG | - | chr8.3:9900186-9900205 | None:intergenic | 25.0% |
| !! | AAGAGCATAAAAAATTCAGA+AGG | - | chr8.3:9899138-9899157 | None:intergenic | 25.0% |
| !! | ATGCAAACTACATTAAGTTT+TGG | + | chr8.3:9899447-9899466 | MS.gene073963:intron | 25.0% |
| !! | ATTCTTTTGTCTCTTATATG+TGG | - | chr8.3:9900101-9900120 | None:intergenic | 25.0% |
| !! | TAGTTAGATTCTGTGTTATT+AGG | + | chr8.3:9899827-9899846 | MS.gene073963:intron | 25.0% |
| !! | TTTTTATAGACAAATGTTGG+TGG | + | chr8.3:9898644-9898663 | MS.gene073963:intron | 25.0% |
| !!! | GAGATTTTGAGTATTTTCTT+AGG | + | chr8.3:9898134-9898153 | MS.gene073963:CDS | 25.0% |
| !!! | GAGTATTTTTTTGGAAAAGA+TGG | + | chr8.3:9899653-9899672 | MS.gene073963:CDS | 25.0% |
| !!! | GTATTAAAATTGCTTTTTGG+GGG | + | chr8.3:9898442-9898461 | MS.gene073963:intron | 25.0% |
| AAATCCAAGTTTCTCTTCAA+TGG | + | chr8.3:9898301-9898320 | MS.gene073963:CDS | 30.0% | |
| AGACAAAAGAATTACGTTTG+AGG | + | chr8.3:9900109-9900128 | MS.gene073963:CDS | 30.0% | |
| AGTGACAAAAAATATGTACC+TGG | - | chr8.3:9899318-9899337 | None:intergenic | 30.0% | |
| ATTCAATGGTAACAATTTGC+TGG | - | chr8.3:9898920-9898939 | None:intergenic | 30.0% | |
| CAATAAAAGAGGAACCATTT+CGG | + | chr8.3:9899986-9900005 | MS.gene073963:CDS | 30.0% | |
| CACTATGATCACAATAAAAG+AGG | + | chr8.3:9899975-9899994 | MS.gene073963:CDS | 30.0% | |
| CTCTTTGACACAAATAATGA+TGG | + | chr8.3:9899153-9899172 | MS.gene073963:CDS | 30.0% | |
| TAATCACATAAACAAACTGC+TGG | + | chr8.3:9900049-9900068 | MS.gene073963:CDS | 30.0% | |
| TAGCATAATCAGAGAAAGAA+TGG | - | chr8.3:9898249-9898268 | None:intergenic | 30.0% | |
| TCATATTTCTCATGACAAAC+AGG | - | chr8.3:9899231-9899250 | None:intergenic | 30.0% | |
| TGCAACTTCATCAATTTCAT+GGG | - | chr8.3:9898405-9898424 | None:intergenic | 30.0% | |
| TGGAAAAGTTAATGGAGTAT+TGG | + | chr8.3:9900196-9900215 | MS.gene073963:CDS | 30.0% | |
| TGTTTGATATTGACAGTAAC+GGG | + | chr8.3:9899381-9899400 | MS.gene073963:CDS | 30.0% | |
| TTCTTAGGACAATAACTTCT+GGG | + | chr8.3:9898149-9898168 | MS.gene073963:CDS | 30.0% | |
| TTGCAACTTCATCAATTTCA+TGG | - | chr8.3:9898406-9898425 | None:intergenic | 30.0% | |
| TTTCTTAGGACAATAACTTC+TGG | + | chr8.3:9898148-9898167 | MS.gene073963:CDS | 30.0% | |
| ! | ACAAGATTGATTACCTTTTC+TGG | - | chr8.3:9898859-9898878 | None:intergenic | 30.0% |
| ! | TTAGAGAAGGTTCTTTAAGA+GGG | + | chr8.3:9899082-9899101 | MS.gene073963:CDS | 30.0% |
| ! | TTGGGAATTTGATAACATGT+TGG | + | chr8.3:9900499-9900518 | MS.gene073963:CDS | 30.0% |
| !! | TGTTTGTTGTATTGTCAACA+GGG | + | chr8.3:9899505-9899524 | MS.gene073963:intron | 30.0% |
| !! | TTGTTTGTTGTATTGTCAAC+AGG | + | chr8.3:9899504-9899523 | MS.gene073963:intron | 30.0% |
| !!! | ATATCTTGTTTTTGGATACC+AGG | + | chr8.3:9899297-9899316 | MS.gene073963:intron | 30.0% |
| AAAACACCGATAGAAAATGG+CGG | + | chr8.3:9899623-9899642 | MS.gene073963:CDS | 35.0% | |
| ACATAAACAAACTGCTGGAT+AGG | + | chr8.3:9900054-9900073 | MS.gene073963:CDS | 35.0% | |
| AGACTCTACGACATAACATA+AGG | + | chr8.3:9898017-9898036 | MS.gene073963:CDS | 35.0% | |
| CATAAACAAACTGCTGGATA+GGG | + | chr8.3:9900055-9900074 | MS.gene073963:CDS | 35.0% | |
| GGAAGAATTCAAGAAAGTGA+TGG | + | chr8.3:9899538-9899557 | MS.gene073963:CDS | 35.0% | |
| GGTATCATGTAATGTCATGT+AGG | + | chr8.3:9900338-9900357 | MS.gene073963:intron | 35.0% | |
| GTGAAAACACCGATAGAAAA+TGG | + | chr8.3:9899620-9899639 | MS.gene073963:CDS | 35.0% | |
| GTTACCATTGAAGAGAAACT+TGG | - | chr8.3:9898308-9898327 | None:intergenic | 35.0% | |
| GTTAGAGAAGGTTCTTTAAG+AGG | + | chr8.3:9899081-9899100 | MS.gene073963:CDS | 35.0% | |
| TAACTTCTGACATTCACGAA+AGG | - | chr8.3:9899424-9899443 | None:intergenic | 35.0% | |
| TGTAATGTCATGTAGGTATG+CGG | + | chr8.3:9900345-9900364 | MS.gene073963:intron | 35.0% | |
| TTTAAAAGCCACTGAAAAGC+TGG | - | chr8.3:9899360-9899379 | None:intergenic | 35.0% | |
| TTTCTCTGATTATGCTACTG+AGG | + | chr8.3:9898252-9898271 | MS.gene073963:CDS | 35.0% | |
| ! | AGATTGATTACCTTTTCTGG+AGG | - | chr8.3:9898856-9898875 | None:intergenic | 35.0% |
| ! | ATGTTGGTTGAACTGTGTAA+AGG | + | chr8.3:9900515-9900534 | MS.gene073963:CDS | 35.0% |
| ! | TAGAGAAGGTTCTTTAAGAG+GGG | + | chr8.3:9899083-9899102 | MS.gene073963:CDS | 35.0% |
| ! | TGTTGGTTGAACTGTGTAAA+GGG | + | chr8.3:9900516-9900535 | MS.gene073963:CDS | 35.0% |
| ! | TTGGAATATGAAGGGTATGA+TGG | + | chr8.3:9898598-9898617 | MS.gene073963:intron | 35.0% |
| !! | ATTTCCTCACGTTTTGGATT+TGG | + | chr8.3:9900480-9900499 | MS.gene073963:CDS | 35.0% |
| !! | TGTTGGTGGTTAATGTGTTA+AGG | + | chr8.3:9898658-9898677 | MS.gene073963:intron | 35.0% |
| !! | TTTCCTCACGTTTTGGATTT+GGG | + | chr8.3:9900481-9900500 | MS.gene073963:CDS | 35.0% |
| !!! | GGTCTCTTGGAGTATTTTTT+TGG | + | chr8.3:9899644-9899663 | MS.gene073963:CDS | 35.0% |
| !!! | TGATGGACTCATTTCTTTTG+CGG | + | chr8.3:9899170-9899189 | MS.gene073963:CDS | 35.0% |
| !!! | TTGGCCTTCAGTTTTATTGA+TGG | + | chr8.3:9899466-9899485 | MS.gene073963:intron | 35.0% |
| AGGAGGAAATACAGGAACAA+TGG | - | chr8.3:9899046-9899065 | None:intergenic | 40.0% | |
| ATGCGATCTCAAAACAGACA+AGG | + | chr8.3:9899566-9899585 | MS.gene073963:CDS | 40.0% | |
| ATTCCCAAATCCAAAACGTG+AGG | - | chr8.3:9900487-9900506 | None:intergenic | 40.0% | |
| CAAGGATAGTGCAAAATCCT+TGG | - | chr8.3:9900012-9900031 | None:intergenic | 40.0% | |
| CGAAAACCTGGAATCAAACA+AGG | - | chr8.3:9898957-9898976 | None:intergenic | 40.0% | |
| CTAACACGTCTTGATTCAGA+AGG | - | chr8.3:9899066-9899085 | None:intergenic | 40.0% | |
| CTTAAGACAACTGCATGATG+AGG | + | chr8.3:9899712-9899731 | MS.gene073963:CDS | 40.0% | |
| GAATCAAGACGTGTTAGAGA+AGG | + | chr8.3:9899069-9899088 | MS.gene073963:CDS | 40.0% | |
| GATTCAGAAGGAGGAAATAC+AGG | - | chr8.3:9899054-9899073 | None:intergenic | 40.0% | |
| TCGAGTACTTTGCATCGAAT+CGG | + | chr8.3:9898974-9898993 | MS.gene073963:CDS | 40.0% | |
| TCTCTGGCCATATTCAGTTA+TGG | + | chr8.3:9900176-9900195 | MS.gene073963:CDS | 40.0% | |
| TCTGACATTCACGAAAGGAA+AGG | - | chr8.3:9899419-9899438 | None:intergenic | 40.0% | |
| TCTTTGATGCTAACCGTGAT+GGG | + | chr8.3:9900409-9900428 | MS.gene073963:CDS | 40.0% | |
| TGACCAATACCAAAAGCCTA+AGG | - | chr8.3:9898194-9898213 | None:intergenic | 40.0% | |
| TGCGATCTCAAAACAGACAA+GGG | + | chr8.3:9899567-9899586 | MS.gene073963:CDS | 40.0% | |
| TGGAAAGAGTTATTAGCACC+AGG | - | chr8.3:9898229-9898248 | None:intergenic | 40.0% | |
| TGGTCATCTTTATCTTCTCC+TGG | + | chr8.3:9898208-9898227 | MS.gene073963:CDS | 40.0% | |
| TGTCAACAGGGAAATAGACA+TGG | + | chr8.3:9899517-9899536 | MS.gene073963:intron | 40.0% | |
| TGTTATGTCGTAGAGTCTGT+TGG | - | chr8.3:9898015-9898034 | None:intergenic | 40.0% | |
| ! | ATGAAGGGTATGATGGAAGT+AGG | + | chr8.3:9898605-9898624 | MS.gene073963:intron | 40.0% |
| ! | ATGACACCTTGTTTGATTCC+AGG | + | chr8.3:9898948-9898967 | MS.gene073963:intron | 40.0% |
| ! | ATGCAAAGTACTCGAAAACC+TGG | - | chr8.3:9898969-9898988 | None:intergenic | 40.0% |
| ! | CAAGGATTTTGCACTATCCT+TGG | + | chr8.3:9900010-9900029 | MS.gene073963:CDS | 40.0% |
| ! | GAAGACATTTCCTCACGTTT+TGG | + | chr8.3:9900474-9900493 | MS.gene073963:CDS | 40.0% |
| ! | TGAGGAGTTCAAAGCTTTTG+CGG | + | chr8.3:9900127-9900146 | MS.gene073963:CDS | 40.0% |
| ! | TGCTAGCTTCTTAGGACTTA+GGG | + | chr8.3:9898547-9898566 | MS.gene073963:intron | 40.0% |
| ! | TTGCTAGCTTCTTAGGACTT+AGG | + | chr8.3:9898546-9898565 | MS.gene073963:intron | 40.0% |
| ! | TTTTCAAAGAGCAGCATCTC+AGG | + | chr8.3:9900229-9900248 | MS.gene073963:CDS | 40.0% |
| !! | AAGAGACCGCCATTTTCTAT+CGG | - | chr8.3:9899632-9899651 | None:intergenic | 40.0% |
| !! | GATAGACTTGCTAGCTTCTT+AGG | + | chr8.3:9898539-9898558 | MS.gene073963:intron | 40.0% |
| AAAGATGCTGCAAGACCATG+AGG | - | chr8.3:9899755-9899774 | None:intergenic | 45.0% | |
| AATGTCTGCAGATGCAACCA+AGG | - | chr8.3:9900030-9900049 | None:intergenic | 45.0% | |
| ACACGTCTTGATTCAGAAGG+AGG | - | chr8.3:9899063-9899082 | None:intergenic | 45.0% | |
| ACTGAATATGGCCAGAGAGA+AGG | - | chr8.3:9900174-9900193 | None:intergenic | 45.0% | |
| CATTCACGAAAGGAAAGGAG+AGG | - | chr8.3:9899414-9899433 | None:intergenic | 45.0% | |
| CCAATACCAAAAGCCTAAGG+TGG | - | chr8.3:9898191-9898210 | None:intergenic | 45.0% | |
| CCTTTCATCACCACCATTTC+CGG | - | chr8.3:9898110-9898129 | None:intergenic | 45.0% | |
| CTTGCAAAGTCCTCCAGAAA+AGG | + | chr8.3:9898843-9898862 | MS.gene073963:CDS | 45.0% | |
| GACCCATCAAAAGAGCTCAA+CGG | - | chr8.3:9898088-9898107 | None:intergenic | 45.0% | |
| GATAGAAAATGGCGGTCTCT+TGG | + | chr8.3:9899631-9899650 | MS.gene073963:CDS | 45.0% | |
| GCGATCTCAAAACAGACAAG+GGG | + | chr8.3:9899568-9899587 | MS.gene073963:CDS | 45.0% | |
| GTCTTTGATGCTAACCGTGA+TGG | + | chr8.3:9900408-9900427 | MS.gene073963:CDS | 45.0% | |
| TCATAAAAACCTCGCCACCA+GGG | - | chr8.3:9899002-9899021 | None:intergenic | 45.0% | |
| TGCAAAATCCTTGGCCGAAA+TGG | - | chr8.3:9900003-9900022 | None:intergenic | 45.0% | |
| TTAAGAGGGGAACAGTTTCC+CGG | + | chr8.3:9899096-9899115 | MS.gene073963:CDS | 45.0% | |
| TTGCACTTAAGCTCCCATCA+CGG | - | chr8.3:9900425-9900444 | None:intergenic | 45.0% | |
| ! | ACCAGAATCCAGCTTTTCAG+TGG | + | chr8.3:9899349-9899368 | MS.gene073963:CDS | 45.0% |
| ! | CCACCTTAGGCTTTTGGTAT+TGG | + | chr8.3:9898188-9898207 | MS.gene073963:CDS | 45.0% |
| ! | CGGAAATGGTGGTGATGAAA+GGG | + | chr8.3:9898108-9898127 | MS.gene073963:CDS | 45.0% |
| ! | CGTTGTGATTGGCTACACAA+CGG | - | chr8.3:9898043-9898062 | None:intergenic | 45.0% |
| ! | CTCCGTTGAGCTCTTTTGAT+GGG | + | chr8.3:9898083-9898102 | MS.gene073963:CDS | 45.0% |
| ! | TCTCCGTTGAGCTCTTTTGA+TGG | + | chr8.3:9898082-9898101 | MS.gene073963:CDS | 45.0% |
| !! | GACAATAACTTCTGGGACTG+TGG | + | chr8.3:9898156-9898175 | MS.gene073963:CDS | 45.0% |
| !! | TCTTTTGATGGGTCCGGAAA+TGG | + | chr8.3:9898094-9898113 | MS.gene073963:CDS | 45.0% |
| !! | TTGAGCTCTTTTGATGGGTC+CGG | + | chr8.3:9898088-9898107 | MS.gene073963:CDS | 45.0% |
| AAGAGGAACCATTTCGGCCA+AGG | + | chr8.3:9899992-9900011 | MS.gene073963:CDS | 50.0% | |
| AGGATCGCATTCTAACGAGC+CGG | - | chr8.3:9899118-9899137 | None:intergenic | 50.0% | |
| ATGACGTGGTGCGTTGTGAT+TGG | - | chr8.3:9898054-9898073 | None:intergenic | 50.0% | |
| ATGGCACGCATCAAATCTGC+AGG | - | chr8.3:9899027-9899046 | None:intergenic | 50.0% | |
| GAAGTTGCAGTCCTTCTCTC+TGG | + | chr8.3:9900160-9900179 | MS.gene073963:CDS | 50.0% | |
| GCAAGACCATGAGGTTTGAG+AGG | - | chr8.3:9899746-9899765 | None:intergenic | 50.0% | |
| GCCACTGAAAAGCTGGATTC+TGG | - | chr8.3:9899353-9899372 | None:intergenic | 50.0% | |
| GTCATAAAAACCTCGCCACC+AGG | - | chr8.3:9899003-9899022 | None:intergenic | 50.0% | |
| TGTGAGCCTCTCAAACCTCA+TGG | + | chr8.3:9899737-9899756 | MS.gene073963:intron | 50.0% | |
| TTTGCATCGAATCGGATCCC+TGG | + | chr8.3:9898982-9899001 | MS.gene073963:CDS | 50.0% | |
| ! | CCGGAAATGGTGGTGATGAA+AGG | + | chr8.3:9898107-9898126 | MS.gene073963:CDS | 50.0% |
| ! | TTGGGACCACCTTAGGCTTT+TGG | + | chr8.3:9898182-9898201 | MS.gene073963:CDS | 50.0% |
| ! | TTTGATGGGTCCGGAAATGG+TGG | + | chr8.3:9898097-9898116 | MS.gene073963:CDS | 50.0% |
| !! | ACTTCTGGGACTGTGGTTGT+TGG | + | chr8.3:9898163-9898182 | MS.gene073963:CDS | 50.0% |
| !! | CTATCGGTGTTTTCACTCCG+AGG | - | chr8.3:9899616-9899635 | None:intergenic | 50.0% |
| !! | CTTCTGGGACTGTGGTTGTT+GGG | + | chr8.3:9898164-9898183 | MS.gene073963:CDS | 50.0% |
| CAAGGGGCTAACCACAGAGA+CGG | + | chr8.3:9899584-9899603 | MS.gene073963:CDS | 55.0% | |
| CGGAGAAGAAGACGATGACG+TGG | - | chr8.3:9898068-9898087 | None:intergenic | 55.0% | |
| GGATCGCATTCTAACGAGCC+GGG | - | chr8.3:9899117-9899136 | None:intergenic | 55.0% | |
| GTGGTTGTTGGGACCACCTT+AGG | + | chr8.3:9898175-9898194 | MS.gene073963:CDS | 55.0% | |
| GCATCGAATCGGATCCCTGG+TGG | + | chr8.3:9898985-9899004 | MS.gene073963:CDS | 60.0% | |
| CACAGAGACGGACGACGCCT+CGG | + | chr8.3:9899596-9899615 | MS.gene073963:CDS | 65.0% | |
| ! | GAATCGGATCCCTGGTGGCG+AGG | + | chr8.3:9898990-9899009 | MS.gene073963:CDS | 65.0% |
| !! | CGAGGCGTCGTCCGTCTCTG+TGG | - | chr8.3:9899598-9899617 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9897986 | 9900548 | 9897986 | ID=MS.gene073963 |
| chr8.3 | mRNA | 9897986 | 9900548 | 9897986 | ID=MS.gene073963.t1;Parent=MS.gene073963 |
| chr8.3 | exon | 9897986 | 9898322 | 9897986 | ID=MS.gene073963.t1.exon1;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9897986 | 9898322 | 9897986 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9898797 | 9898864 | 9898797 | ID=MS.gene073963.t1.exon2;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9898797 | 9898864 | 9898797 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9898970 | 9899193 | 9898970 | ID=MS.gene073963.t1.exon3;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9898970 | 9899193 | 9898970 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9899319 | 9899402 | 9899319 | ID=MS.gene073963.t1.exon4;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9899319 | 9899402 | 9899319 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9899526 | 9899733 | 9899526 | ID=MS.gene073963.t1.exon5;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9899526 | 9899733 | 9899526 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9899954 | 9900250 | 9899954 | ID=MS.gene073963.t1.exon6;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9899954 | 9900250 | 9899954 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| chr8.3 | exon | 9900360 | 9900548 | 9900360 | ID=MS.gene073963.t1.exon7;Parent=MS.gene073963.t1 |
| chr8.3 | CDS | 9900360 | 9900548 | 9900360 | ID=cds.MS.gene073963.t1;Parent=MS.gene073963.t1 |
| Gene Sequence |
| Protein sequence |
