Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73546.t1 | XP_013467985.1 | 96.6 | 263 | 9 | 0 | 1 | 263 | 1 | 263 | 1.80E-144 | 521.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73546.t1 | O04846 | 44.6 | 258 | 140 | 2 | 6 | 263 | 11 | 265 | 4.1e-65 | 249.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73546.t1 | A0A072VJP4 | 96.6 | 263 | 9 | 0 | 1 | 263 | 1 | 263 | 1.3e-144 | 521.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene73546 | 0.809528 | 1.81E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene73546 | 0.817171 | 3.79E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene73546 | 0.846703 | 1.84E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene73546 | 0.864458 | 1.20E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene73546 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene73546 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene73546 | 0.813448 | 2.55E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene73546 | 0.851003 | 1.18E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene73546 | 0.844858 | 5.83E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene73546 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene049656 | MS.gene73546 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene049865 | MS.gene73546 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene73546 | 0.812899 | 3.36E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene73546 | 0.82143 | 4.05E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene73546 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene73546 | 0.815857 | 7.46E-52 | -1.69E-46 |
| MS.gene050375 | MS.gene73546 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene73546 | -0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene73546 | -0.805261 | 1.45E-49 | -1.69E-46 |
| MS.gene050499 | MS.gene73546 | 0.844838 | 5.90E-59 | -1.69E-46 |
| MS.gene050502 | MS.gene73546 | 0.856131 | 3.96E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene73546 | 0.812645 | 3.82E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene73546 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene73546 | 0.821236 | 4.49E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene73546 | 0.811278 | 7.58E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene73546 | 0.800378 | 1.48E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene73546 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene73546 | 0.852147 | 5.59E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene73546 | 0.860477 | 2.01E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene73546 | 0.820124 | 8.10E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene73546 | 0.838999 | 2.06E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene73546 | 0.839746 | 1.32E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene73546 | 0.852943 | 3.31E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene73546 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene73546 | 0.817114 | 3.90E-52 | -1.69E-46 |
| MS.gene051255 | MS.gene73546 | 0.808159 | 3.55E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene73546 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene051509 | MS.gene73546 | 0.860284 | 2.30E-63 | -1.69E-46 |
| MS.gene051551 | MS.gene73546 | 0.826274 | 2.97E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene73546 | 0.808091 | 3.67E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene73546 | 0.817988 | 2.48E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene73546 | 0.847566 | 1.07E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene73546 | 0.824827 | 6.54E-54 | -1.69E-46 |
| MS.gene051941 | MS.gene73546 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene73546 | 0.850358 | 1.79E-60 | -1.69E-46 |
| MS.gene052346 | MS.gene73546 | 0.834442 | 2.99E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene73546 | 0.833811 | 4.30E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene73546 | 0.808693 | 2.73E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene73546 | 0.835853 | 1.32E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene73546 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene73546 | 0.842439 | 2.58E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene73546 | 0.831518 | 1.60E-55 | -1.69E-46 |
| MS.gene052503 | MS.gene73546 | 0.849076 | 4.08E-60 | -1.69E-46 |
| MS.gene052505 | MS.gene73546 | 0.815827 | 7.57E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene73546 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene73546 | 0.842285 | 2.84E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene73546 | 0.836445 | 9.32E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene73546 | 0.839129 | 1.91E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene73546 | 0.823381 | 1.43E-53 | -1.69E-46 |
| MS.gene053018 | MS.gene73546 | 0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene73546 | 0.832197 | 1.08E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene73546 | 0.813012 | 3.17E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene73546 | 0.853472 | 2.34E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene73546 | 0.848921 | 4.50E-60 | -1.69E-46 |
| MS.gene053318 | MS.gene73546 | 0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene73546 | 0.853156 | 2.88E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene73546 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene053505 | MS.gene73546 | 0.805298 | 1.43E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene73546 | 0.901028 | 4.05E-78 | -1.69E-46 |
| MS.gene053626 | MS.gene73546 | 0.838095 | 3.53E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene73546 | 0.807609 | 4.65E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene73546 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene73546 | 0.838613 | 2.59E-57 | -1.69E-46 |
| MS.gene054003 | MS.gene73546 | 0.831365 | 1.74E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene73546 | 0.816343 | 5.81E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene73546 | 0.834678 | 2.61E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene73546 | 0.822701 | 2.06E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene73546 | 0.812746 | 3.63E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene73546 | 0.858788 | 6.48E-63 | -1.69E-46 |
| MS.gene05492 | MS.gene73546 | 0.833915 | 4.05E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene73546 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene73546 | 0.822866 | 1.88E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene73546 | 0.807221 | 5.62E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene73546 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene73546 | 0.822744 | 2.01E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene73546 | 0.822227 | 2.65E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene73546 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene73546 | 0.824257 | 8.90E-54 | -1.69E-46 |
| MS.gene055629 | MS.gene73546 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene73546 | 0.811925 | 5.49E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene73546 | 0.881705 | 1.92E-70 | -1.69E-46 |
| MS.gene05589 | MS.gene73546 | 0.821052 | 4.95E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene73546 | 0.834728 | 2.53E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene73546 | 0.835967 | 1.23E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene73546 | 0.819416 | 1.17E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene73546 | 0.818422 | 1.98E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene73546 | 0.902194 | 1.24E-78 | -1.69E-46 |
| MS.gene056374 | MS.gene73546 | 0.813966 | 1.96E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene73546 | 0.85475 | 1.00E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene73546 | 0.828235 | 1.01E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene73546 | 0.86209 | 6.48E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene73546 | 0.848141 | 7.40E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene73546 | 0.824611 | 7.35E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene73546 | 0.816461 | 5.46E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene73546 | 0.830644 | 2.62E-55 | -1.69E-46 |
| MS.gene05666 | MS.gene73546 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene73546 | 0.84198 | 3.42E-58 | -1.69E-46 |
| MS.gene056946 | MS.gene73546 | 0.807237 | 5.57E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene73546 | 0.831555 | 1.56E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene73546 | 0.824962 | 6.07E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene73546 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene73546 | 0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene73546 | 0.822892 | 1.86E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene73546 | 0.850355 | 1.79E-60 | -1.69E-46 |
| MS.gene057831 | MS.gene73546 | 0.804824 | 1.79E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene73546 | 0.807227 | 5.60E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene73546 | 0.819232 | 1.29E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene73546 | 0.808138 | 3.59E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene73546 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene73546 | 0.802152 | 6.42E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene73546 | 0.817251 | 3.63E-52 | -1.69E-46 |
| MS.gene058183 | MS.gene73546 | 0.800189 | 1.62E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene73546 | 0.828374 | 9.32E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene73546 | 0.837805 | 4.18E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene73546 | 0.825385 | 4.82E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene73546 | 0.815301 | 9.92E-52 | -1.69E-46 |
| MS.gene058995 | MS.gene73546 | 0.807021 | 6.20E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene73546 | 0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene73546 | 0.817125 | 3.88E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene73546 | 0.838136 | 3.44E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene73546 | 0.814806 | 1.28E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene73546 | 0.862407 | 5.18E-64 | -1.69E-46 |
| MS.gene059368 | MS.gene73546 | 0.848923 | 4.50E-60 | -1.69E-46 |
| MS.gene059455 | MS.gene73546 | 0.833338 | 5.65E-56 | -1.69E-46 |
| MS.gene059517 | MS.gene73546 | 0.856446 | 3.20E-62 | -1.69E-46 |
| MS.gene059536 | MS.gene73546 | 0.812728 | 3.66E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene73546 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene059680 | MS.gene73546 | 0.842902 | 1.95E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene73546 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene73546 | 0.829664 | 4.54E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene73546 | 0.816205 | 6.23E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene73546 | 0.836231 | 1.06E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene73546 | 0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene73546 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene060401 | MS.gene73546 | 0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene73546 | 0.887734 | 1.10E-72 | -1.69E-46 |
| MS.gene060703 | MS.gene73546 | 0.824627 | 7.29E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene73546 | 0.815311 | 9.87E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene73546 | 0.824994 | 5.97E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene73546 | 0.841552 | 4.43E-58 | -1.69E-46 |
| MS.gene060804 | MS.gene73546 | 0.831646 | 1.48E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene73546 | 0.845217 | 4.66E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene73546 | 0.879311 | 1.38E-69 | -1.69E-46 |
| MS.gene06092 | MS.gene73546 | 0.806494 | 8.01E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene73546 | 0.854452 | 1.22E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene73546 | 0.823621 | 1.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73546.t1 | MTR_1g059960 | 96.578 | 263 | 9 | 0 | 1 | 263 | 1 | 263 | 0.0 | 526 |
| MS.gene73546.t1 | MTR_1g059960 | 96.250 | 240 | 9 | 0 | 24 | 263 | 3 | 242 | 2.56e-174 | 481 |
| MS.gene73546.t1 | MTR_1g059940 | 84.791 | 263 | 40 | 0 | 1 | 263 | 1 | 263 | 6.22e-168 | 465 |
| MS.gene73546.t1 | MTR_1g059900 | 85.787 | 197 | 28 | 0 | 67 | 263 | 1 | 197 | 6.91e-126 | 356 |
| MS.gene73546.t1 | MTR_7g102960 | 41.573 | 267 | 139 | 6 | 7 | 263 | 9 | 268 | 1.69e-62 | 198 |
| MS.gene73546.t1 | MTR_0219s0070 | 39.560 | 273 | 152 | 7 | 2 | 267 | 6 | 272 | 9.13e-62 | 196 |
| MS.gene73546.t1 | MTR_1g062880 | 41.810 | 232 | 126 | 3 | 35 | 263 | 48 | 273 | 5.66e-60 | 192 |
| MS.gene73546.t1 | MTR_1g062860 | 35.741 | 263 | 159 | 4 | 9 | 266 | 19 | 276 | 1.44e-58 | 188 |
| MS.gene73546.t1 | MTR_7g090950 | 38.290 | 269 | 143 | 6 | 10 | 268 | 8 | 263 | 4.71e-56 | 181 |
| MS.gene73546.t1 | MTR_0219s0130 | 50.820 | 61 | 30 | 0 | 202 | 262 | 3 | 63 | 1.48e-17 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73546.t1 | AT3G52720 | 44.574 | 258 | 140 | 2 | 6 | 263 | 11 | 265 | 2.85e-83 | 251 |
| MS.gene73546.t1 | AT3G52720 | 44.574 | 258 | 140 | 2 | 6 | 263 | 11 | 265 | 2.85e-83 | 251 |
| MS.gene73546.t1 | AT3G52720 | 44.574 | 258 | 140 | 2 | 6 | 263 | 11 | 265 | 2.85e-83 | 251 |
| MS.gene73546.t1 | AT3G52720 | 42.534 | 221 | 124 | 2 | 6 | 226 | 11 | 228 | 5.46e-64 | 200 |
| MS.gene73546.t1 | AT2G28210 | 38.806 | 268 | 149 | 6 | 5 | 263 | 10 | 271 | 1.67e-61 | 196 |
| MS.gene73546.t1 | AT1G08080 | 39.662 | 237 | 137 | 2 | 27 | 263 | 41 | 271 | 2.10e-60 | 193 |
| MS.gene73546.t1 | AT4G20990 | 37.712 | 236 | 134 | 5 | 35 | 270 | 45 | 267 | 3.68e-55 | 179 |
| MS.gene73546.t1 | AT5G04180 | 38.911 | 257 | 142 | 7 | 9 | 258 | 5 | 253 | 5.85e-53 | 174 |
| MS.gene73546.t1 | AT1G08065 | 35.472 | 265 | 157 | 4 | 7 | 263 | 10 | 268 | 1.53e-52 | 172 |
| MS.gene73546.t1 | AT4G21000 | 37.824 | 193 | 110 | 4 | 34 | 226 | 45 | 227 | 2.63e-42 | 145 |
| MS.gene73546.t1 | AT5G56330 | 32.377 | 244 | 116 | 5 | 24 | 263 | 136 | 334 | 9.16e-34 | 125 |
| MS.gene73546.t1 | AT5G56330 | 38.462 | 169 | 95 | 4 | 24 | 184 | 136 | 303 | 3.97e-30 | 115 |
| MS.gene73546.t1 | AT2G28210 | 39.850 | 133 | 71 | 4 | 5 | 128 | 10 | 142 | 3.68e-24 | 95.9 |
Find 70 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTAAGGGTTTCAATTCT+TGG | 0.170815 | 1.4:+48983263 | None:intergenic |
| AAACGTGCCAAGGGCAATTT+TGG | 0.183202 | 1.4:+48981642 | None:intergenic |
| TATTGCAGCCCTCTACAATT+TGG | 0.195816 | 1.4:-48981958 | MS.gene73546:CDS |
| GTGGGAGATATTAATATAAA+TGG | 0.232737 | 1.4:-48982887 | MS.gene73546:CDS |
| AGGATGGTAGTTTCTGTCTA+AGG | 0.282486 | 1.4:+48983249 | None:intergenic |
| AACTTTACCTTGGAGATTAG+AGG | 0.311376 | 1.4:+48981924 | None:intergenic |
| TTAACAAGTGTAGCATTTGT+AGG | 0.319349 | 1.4:+48983229 | None:intergenic |
| CCCCACTTCTCAGGACCATT+TGG | 0.327367 | 1.4:+48983370 | None:intergenic |
| TTAACAACCAATTCAACATT+GGG | 0.341353 | 1.4:-48983210 | MS.gene73546:CDS |
| ATGTAGAGGAAATAAATAAA+AGG | 0.341861 | 1.4:-48981618 | MS.gene73546:CDS |
| TACATACCCCAATGTTGAAT+TGG | 0.343928 | 1.4:+48983203 | None:intergenic |
| AATTCTTCTTATTGCAACTT+TGG | 0.348144 | 1.4:-48983579 | MS.gene73546:CDS |
| CAACATATCTATAATATCTA+TGG | 0.348697 | 1.4:+48981593 | None:intergenic |
| ATTCATTGAAACAACTTCAT+TGG | 0.362363 | 1.4:-48982856 | MS.gene73546:CDS |
| ATTGCAGCCCTCTACAATTT+GGG | 0.374926 | 1.4:-48981957 | MS.gene73546:CDS |
| CATGCAAAGAAGGTGTCATT+TGG | 0.384098 | 1.4:-48981552 | MS.gene73546:CDS |
| TCGTTTGCAGCATGCTCAAA+TGG | 0.388881 | 1.4:-48983334 | MS.gene73546:CDS |
| GGCATGCTCCTGCAGAGCAC+CGG | 0.395484 | 1.4:-48982835 | MS.gene73546:CDS |
| CCATGAGCCCGGTGCTCTGC+AGG | 0.396230 | 1.4:+48982827 | None:intergenic |
| CTCAGGGTTCCCCACTTCTC+AGG | 0.400725 | 1.4:+48983361 | None:intergenic |
| TTTAGTTATATTGGACCAAA+TGG | 0.408021 | 1.4:-48983385 | MS.gene73546:CDS |
| ACCTTGGAGATTAGAGGATC+AGG | 0.410512 | 1.4:+48981930 | None:intergenic |
| AGCACAAAGTCCAGTGGAAC+TGG | 0.431911 | 1.4:-48983308 | MS.gene73546:CDS |
| CCTGCAGAGCACCGGGCTCA+TGG | 0.434839 | 1.4:-48982827 | MS.gene73546:CDS |
| ATTGCCCACACGATTCTCAT+TGG | 0.437600 | 1.4:+48981672 | None:intergenic |
| GCAGGTTAGGACACTCTCTA+AGG | 0.441593 | 1.4:-48981338 | MS.gene73546:intron |
| GGTGTCATTTGGAACATCAT+TGG | 0.445336 | 1.4:-48981541 | MS.gene73546:CDS |
| GGATGGTAGTTTCTGTCTAA+GGG | 0.452303 | 1.4:+48983250 | None:intergenic |
| GTTAACAACCAATTCAACAT+TGG | 0.453599 | 1.4:-48983211 | MS.gene73546:CDS |
| TATCTTCTGTGAGGTGAACT+AGG | 0.462726 | 1.4:+48981997 | None:intergenic |
| AAAACTTCTAAAGGCACCAC+TGG | 0.479462 | 1.4:-48981308 | MS.gene73546:CDS |
| GCATGCTCCTGCAGAGCACC+GGG | 0.482296 | 1.4:-48982834 | MS.gene73546:CDS |
| CCTTGGCACGTTTGATGTAG+AGG | 0.490692 | 1.4:-48981632 | MS.gene73546:CDS |
| CAAATGACACCTTCTTTGCA+TGG | 0.493029 | 1.4:+48981553 | None:intergenic |
| CATAGATATTATAGATATGT+TGG | 0.494664 | 1.4:-48981592 | MS.gene73546:CDS |
| CGTTTGCAGCATGCTCAAAT+GGG | 0.497742 | 1.4:-48983333 | MS.gene73546:CDS |
| ATGCTGCAAACGATGGACTC+AGG | 0.504036 | 1.4:+48983344 | None:intergenic |
| GGAACAACTAAAACTTCTAA+AGG | 0.517615 | 1.4:-48981317 | MS.gene73546:CDS |
| CGACCATTCAGTGGCTGAAG+AGG | 0.517939 | 1.4:+48981259 | None:intergenic |
| TCATTCATTACCAGTTCCAC+TGG | 0.518412 | 1.4:+48983298 | None:intergenic |
| ACTACCCCTCCATGCAAAGA+AGG | 0.533789 | 1.4:-48981562 | MS.gene73546:CDS |
| CCTCTACATCAAACGTGCCA+AGG | 0.536082 | 1.4:+48981632 | None:intergenic |
| AGGCCTCTTCAGCCACTGAA+TGG | 0.536775 | 1.4:-48981262 | MS.gene73546:CDS |
| CAAGTGTAGCATTTGTAGGA+TGG | 0.539412 | 1.4:+48983233 | None:intergenic |
| CTTACAAACGACCATGAGCC+CGG | 0.541180 | 1.4:+48982816 | None:intergenic |
| ACCAAATGGTCCTGAGAAGT+GGG | 0.541655 | 1.4:-48983371 | MS.gene73546:CDS |
| GACCAAATGGTCCTGAGAAG+TGG | 0.543240 | 1.4:-48983372 | MS.gene73546:CDS |
| TGACACCTTCTTTGCATGGA+GGG | 0.546979 | 1.4:+48981557 | None:intergenic |
| AAAGATGCCAAAATTGCCCT+TGG | 0.561911 | 1.4:-48981649 | MS.gene73546:CDS |
| TTCCAAATACAGACATGAAG+CGG | 0.562427 | 1.4:-48982027 | MS.gene73546:intron |
| TTTAGAGGGATACTAACATC+AGG | 0.569976 | 1.4:+48981126 | None:intergenic |
| TGCTGCAAACGATGGACTCA+GGG | 0.573943 | 1.4:+48983345 | None:intergenic |
| TTTGAGCATGCTGCAAACGA+TGG | 0.579578 | 1.4:+48983337 | None:intergenic |
| GACACCTTCTTTGCATGGAG+GGG | 0.587126 | 1.4:+48981558 | None:intergenic |
| CTCTACATCAAACGTGCCAA+GGG | 0.596044 | 1.4:+48981633 | None:intergenic |
| TCCTGATCCTCTAATCTCCA+AGG | 0.598297 | 1.4:-48981931 | MS.gene73546:intron |
| TGTTATTGTTATCTTCTGTG+AGG | 0.604430 | 1.4:+48981988 | None:intergenic |
| CAGGATCACCCAAATTGTAG+AGG | 0.616295 | 1.4:+48981949 | None:intergenic |
| CATTTGGAACATCATTGGCA+AGG | 0.625922 | 1.4:-48981536 | MS.gene73546:intron |
| AAACTTCTAAAGGCACCACT+GGG | 0.635766 | 1.4:-48981307 | MS.gene73546:CDS |
| AGGATCACCCAAATTGTAGA+GGG | 0.637120 | 1.4:+48981950 | None:intergenic |
| TAACAACCAATTCAACATTG+GGG | 0.644450 | 1.4:-48983209 | MS.gene73546:intron |
| ATGACACCTTCTTTGCATGG+AGG | 0.651112 | 1.4:+48981556 | None:intergenic |
| TAGAGTTTCAGCATAACGCA+AGG | 0.651374 | 1.4:-48981282 | MS.gene73546:CDS |
| GCTAGCCAATGAGAATCGTG+TGG | 0.657074 | 1.4:-48981677 | MS.gene73546:CDS |
| TGGGAAAGCACAAAGTCCAG+TGG | 0.663928 | 1.4:-48983314 | MS.gene73546:CDS |
| CTAGCCAATGAGAATCGTGT+GGG | 0.675900 | 1.4:-48981676 | MS.gene73546:CDS |
| CTTCTGTGAGGTGAACTAGG+TGG | 0.676418 | 1.4:+48982000 | None:intergenic |
| TGCTGAAACTCTACACCCAG+TGG | 0.677645 | 1.4:+48981292 | None:intergenic |
| CCAAATGGTCCTGAGAAGTG+GGG | 0.710021 | 1.4:-48983370 | MS.gene73546:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATCTAATTTAATATATAT+TGG | - | chr1.4:48982563-48982582 | MS.gene73546:intron | 10.0% |
| !! | TAAATGTAGAATATATTATT+TGG | - | chr1.4:48982965-48982984 | MS.gene73546:intron | 10.0% |
| !! | TTCAAATTATTATTATTAGT+CGG | - | chr1.4:48981678-48981697 | MS.gene73546:CDS | 10.0% |
| !! | AAAAATTTATAAGCATCATT+TGG | + | chr1.4:48982231-48982250 | None:intergenic | 15.0% |
| !! | AGTTATATAAATAGTTTGAA+AGG | + | chr1.4:48982402-48982421 | None:intergenic | 15.0% |
| !! | ATTTAATATATATTGGTACA+AGG | - | chr1.4:48982570-48982589 | MS.gene73546:intron | 15.0% |
| !! | ATTTGAAAAGTAAAAATGAT+TGG | + | chr1.4:48981665-48981684 | None:intergenic | 15.0% |
| !! | TAAAAACTACATTTAATTCA+TGG | + | chr1.4:48983540-48983559 | None:intergenic | 15.0% |
| !! | TCAAATTTATAAAACCAATT+CGG | + | chr1.4:48983261-48983280 | None:intergenic | 15.0% |
| !!! | AATTCTATAATGTTTTTTAG+TGG | + | chr1.4:48982003-48982022 | None:intergenic | 15.0% |
| !!! | TTTGTATTAATTTTTGCTTT+TGG | - | chr1.4:48983335-48983354 | MS.gene73546:CDS | 15.0% |
| !! | AAACAAAGTACACAATTATA+AGG | - | chr1.4:48981737-48981756 | MS.gene73546:intron | 20.0% |
| !! | ATGTAGAGGAAATAAATAAA+AGG | - | chr1.4:48983106-48983125 | MS.gene73546:intron | 20.0% |
| !! | CAACATATCTATAATATCTA+TGG | + | chr1.4:48983134-48983153 | None:intergenic | 20.0% |
| !! | CATAGATATTATAGATATGT+TGG | - | chr1.4:48983132-48983151 | MS.gene73546:intron | 20.0% |
| !! | TAATTCAACAGAATGTTTAA+AGG | - | chr1.4:48982340-48982359 | MS.gene73546:intron | 20.0% |
| !! | TTTATTCCTTTACAAAAATC+TGG | + | chr1.4:48982507-48982526 | None:intergenic | 20.0% |
| !!! | AAAATATAGGTACATTTTGA+AGG | - | chr1.4:48981810-48981829 | MS.gene73546:intron | 20.0% |
| !!! | AACTAACATTGTAATTTGTA+AGG | + | chr1.4:48982657-48982676 | None:intergenic | 20.0% |
| !!! | AATATTCAATTTTGAAGTGT+CGG | + | chr1.4:48981616-48981635 | None:intergenic | 20.0% |
| !!! | AATGTAAAGTAATTTGTGTT+TGG | - | chr1.4:48983300-48983319 | MS.gene73546:CDS | 20.0% |
| !!! | ACAAATTTTATGATAAAGCT+AGG | - | chr1.4:48983560-48983579 | MS.gene73546:CDS | 20.0% |
| !!! | ACTAACATTGTAATTTGTAA+GGG | + | chr1.4:48982656-48982675 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTATGCTAGATT+CGG | - | chr1.4:48981311-48981330 | MS.gene73546:CDS | 20.0% |
| !!! | CTTAAAAAGTGTAAAAATTG+TGG | - | chr1.4:48981566-48981585 | MS.gene73546:CDS | 20.0% |
| !!! | GCTAAATAGATTTTTATTAG+AGG | + | chr1.4:48982634-48982653 | None:intergenic | 20.0% |
| !!! | TCGGTTAATTTTAGTTATAT+TGG | - | chr1.4:48981330-48981349 | MS.gene73546:CDS | 20.0% |
| ! | AACGTTCATATTTGATATCA+CGG | - | chr1.4:48982843-48982862 | MS.gene73546:CDS | 25.0% |
| ! | AACTATAATTTAAGTCAGAG+AGG | + | chr1.4:48982079-48982098 | None:intergenic | 25.0% |
| ! | AAGTACACAATTATAAGGTA+AGG | - | chr1.4:48981742-48981761 | MS.gene73546:intron | 25.0% |
| ! | AATTCTTCTTATTGCAACTT+TGG | - | chr1.4:48981145-48981164 | MS.gene73546:CDS | 25.0% |
| ! | ACTATAATTTAAGTCAGAGA+GGG | + | chr1.4:48982078-48982097 | None:intergenic | 25.0% |
| ! | ATATATATTGGTACAAGGAA+TGG | - | chr1.4:48982575-48982594 | MS.gene73546:intron | 25.0% |
| ! | ATTCATTGAAACAACTTCAT+TGG | - | chr1.4:48981868-48981887 | MS.gene73546:intron | 25.0% |
| ! | CAATACATTCACAAAATCAA+GGG | - | chr1.4:48981962-48981981 | MS.gene73546:CDS | 25.0% |
| ! | GTGGGAGATATTAATATAAA+TGG | - | chr1.4:48981837-48981856 | MS.gene73546:intron | 25.0% |
| ! | TAGATGTAGAATATACGATA+TGG | + | chr1.4:48982550-48982569 | None:intergenic | 25.0% |
| ! | TATATATTGGTACAAGGAAT+GGG | - | chr1.4:48982576-48982595 | MS.gene73546:intron | 25.0% |
| ! | TGACTTAAATAACTTTACCT+TGG | + | chr1.4:48982813-48982832 | None:intergenic | 25.0% |
| ! | TTAACAACCAATTCAACATT+GGG | - | chr1.4:48981514-48981533 | MS.gene73546:intron | 25.0% |
| ! | TTTAGTTATATTGGACCAAA+TGG | - | chr1.4:48981339-48981358 | MS.gene73546:intron | 25.0% |
| !! | ATCAACTGCATCTATTATTT+TGG | + | chr1.4:48981249-48981268 | None:intergenic | 25.0% |
| !! | CTTGATTTTGTGAATGTATT+GGG | + | chr1.4:48981963-48981982 | None:intergenic | 25.0% |
| !! | TTAGTTCCAGATTTTTGTAA+AGG | - | chr1.4:48982498-48982517 | MS.gene73546:intron | 25.0% |
| !!! | GGTTGAGTTTGTTAAAATAT+AGG | - | chr1.4:48981797-48981816 | MS.gene73546:intron | 25.0% |
| AATTGTGATGTCAACTGATA+TGG | - | chr1.4:48981776-48981795 | MS.gene73546:intron | 30.0% | |
| AGGTACTAAGTTTAATCAGT+TGG | - | chr1.4:48983208-48983227 | MS.gene73546:intron | 30.0% | |
| AGTTTAATCAGTTGGTTATG+CGG | - | chr1.4:48983216-48983235 | MS.gene73546:CDS | 30.0% | |
| ATTATAAGGTAAGGTTGTTG+AGG | - | chr1.4:48981751-48981770 | MS.gene73546:intron | 30.0% | |
| CAACAGAATGTTTAAAGGAT+AGG | - | chr1.4:48982345-48982364 | MS.gene73546:intron | 30.0% | |
| CCAATACATTCACAAAATCA+AGG | - | chr1.4:48981961-48981980 | MS.gene73546:CDS | 30.0% | |
| CGGTAGTATATAGTTATGAT+GGG | + | chr1.4:48981596-48981615 | None:intergenic | 30.0% | |
| CTAGAATAAATCAGAATGCA+TGG | + | chr1.4:48982605-48982624 | None:intergenic | 30.0% | |
| GGAACAACTAAAACTTCTAA+AGG | - | chr1.4:48983407-48983426 | MS.gene73546:intron | 30.0% | |
| GGTAGTATATAGTTATGATG+GGG | + | chr1.4:48981595-48981614 | None:intergenic | 30.0% | |
| GTATAGCTACTAATTACATG+TGG | - | chr1.4:48982991-48983010 | MS.gene73546:intron | 30.0% | |
| GTTAACAACCAATTCAACAT+TGG | - | chr1.4:48981513-48981532 | MS.gene73546:intron | 30.0% | |
| TAACAACCAATTCAACATTG+GGG | - | chr1.4:48981515-48981534 | MS.gene73546:intron | 30.0% | |
| TCGGTAGTATATAGTTATGA+TGG | + | chr1.4:48981597-48981616 | None:intergenic | 30.0% | |
| TGAGTTTCACAATAATGAAC+AGG | + | chr1.4:48982132-48982151 | None:intergenic | 30.0% | |
| TGTTATTGTTATCTTCTGTG+AGG | + | chr1.4:48982739-48982758 | None:intergenic | 30.0% | |
| TTAACAAGTGTAGCATTTGT+AGG | + | chr1.4:48981498-48981517 | None:intergenic | 30.0% | |
| TTTATGATAAAGCTAGGTAC+TGG | - | chr1.4:48983566-48983585 | MS.gene73546:CDS | 30.0% | |
| ! | CCTTGATTTTGTGAATGTAT+TGG | + | chr1.4:48981964-48981983 | None:intergenic | 30.0% |
| !! | GAAATTGATTTTGACCGAAT+TGG | - | chr1.4:48983244-48983263 | MS.gene73546:CDS | 30.0% |
| !! | GTACATTTTGAAGGTAAAGT+GGG | - | chr1.4:48981819-48981838 | MS.gene73546:intron | 30.0% |
| AACTACCACAAATAGAGACA+TGG | - | chr1.4:48983504-48983523 | MS.gene73546:intron | 35.0% | |
| AACTTTACCTTGGAGATTAG+AGG | + | chr1.4:48982803-48982822 | None:intergenic | 35.0% | |
| ACTACCACAAATAGAGACAT+GGG | - | chr1.4:48983505-48983524 | MS.gene73546:intron | 35.0% | |
| ATTTACCACGAATCCAAACA+AGG | - | chr1.4:48982908-48982927 | MS.gene73546:CDS | 35.0% | |
| CAAGAGTCAAGACTATAAAG+TGG | - | chr1.4:48982942-48982961 | MS.gene73546:intron | 35.0% | |
| CAGAATGTTTAAAGGATAGG+AGG | - | chr1.4:48982348-48982367 | MS.gene73546:intron | 35.0% | |
| TACATACCCCAATGTTGAAT+TGG | + | chr1.4:48981524-48981543 | None:intergenic | 35.0% | |
| TACATTCACAAAATCAAGGG+CGG | - | chr1.4:48981965-48981984 | MS.gene73546:CDS | 35.0% | |
| TGAGTCATGTAATCCTTGTT+TGG | + | chr1.4:48982924-48982943 | None:intergenic | 35.0% | |
| TGTCTAAGGGTTTCAATTCT+TGG | + | chr1.4:48981464-48981483 | None:intergenic | 35.0% | |
| TTCCAAATACAGACATGAAG+CGG | - | chr1.4:48982697-48982716 | MS.gene73546:intron | 35.0% | |
| TTCTTACTTAATGAGCATGC+AGG | - | chr1.4:48983368-48983387 | MS.gene73546:CDS | 35.0% | |
| TTTAGAGGGATACTAACATC+AGG | + | chr1.4:48983601-48983620 | None:intergenic | 35.0% | |
| ! | ATTATTATTAGTCGGTGCCT+AGG | - | chr1.4:48981686-48981705 | MS.gene73546:CDS | 35.0% |
| !! | AGCTTGATAATGACAACTTG+AGG | - | chr1.4:48982430-48982449 | MS.gene73546:intron | 35.0% |
| !! | GGTACATTTTGAAGGTAAAG+TGG | - | chr1.4:48981818-48981837 | MS.gene73546:intron | 35.0% |
| AAAGATGCCAAAATTGCCCT+TGG | - | chr1.4:48983075-48983094 | MS.gene73546:intron | 40.0% | |
| AAGAAGAAGAGAGAGGGAAA+AGG | + | chr1.4:48981936-48981955 | None:intergenic | 40.0% | |
| ACTTAATGAGCATGCAGGTT+AGG | - | chr1.4:48983373-48983392 | MS.gene73546:CDS | 40.0% | |
| AGAAGAAGAGAGAGGGAAAA+GGG | + | chr1.4:48981935-48981954 | None:intergenic | 40.0% | |
| AGGATCACCCAAATTGTAGA+GGG | + | chr1.4:48982777-48982796 | None:intergenic | 40.0% | |
| AGGATGGTAGTTTCTGTCTA+AGG | + | chr1.4:48981478-48981497 | None:intergenic | 40.0% | |
| ATTGCAGCCCTCTACAATTT+GGG | - | chr1.4:48982767-48982786 | MS.gene73546:intron | 40.0% | |
| CAAATGACACCTTCTTTGCA+TGG | + | chr1.4:48983174-48983193 | None:intergenic | 40.0% | |
| CAAGTGTAGCATTTGTAGGA+TGG | + | chr1.4:48981494-48981513 | None:intergenic | 40.0% | |
| CGGTAAATTTGTCGAAGTCA+TGG | - | chr1.4:48982863-48982882 | MS.gene73546:CDS | 40.0% | |
| GAATCCCATGTCTCTATTTG+TGG | + | chr1.4:48983512-48983531 | None:intergenic | 40.0% | |
| GGATGGTAGTTTCTGTCTAA+GGG | + | chr1.4:48981477-48981496 | None:intergenic | 40.0% | |
| TAGAGTTTCAGCATAACGCA+AGG | - | chr1.4:48983442-48983461 | MS.gene73546:intron | 40.0% | |
| TATCTTCTGTGAGGTGAACT+AGG | + | chr1.4:48982730-48982749 | None:intergenic | 40.0% | |
| TATTGCAGCCCTCTACAATT+TGG | - | chr1.4:48982766-48982785 | MS.gene73546:intron | 40.0% | |
| TCATTCATTACCAGTTCCAC+TGG | + | chr1.4:48981429-48981448 | None:intergenic | 40.0% | |
| ! | CATTTGGAACATCATTGGCA+AGG | - | chr1.4:48983188-48983207 | MS.gene73546:intron | 40.0% |
| ! | GTAATCCTTGTTTGGATTCG+TGG | + | chr1.4:48982916-48982935 | None:intergenic | 40.0% |
| ! | TCAATTTTGCGACCATTCAG+TGG | + | chr1.4:48983477-48983496 | None:intergenic | 40.0% |
| !! | AAAACTTCTAAAGGCACCAC+TGG | - | chr1.4:48983416-48983435 | MS.gene73546:intron | 40.0% |
| !! | AAACTTCTAAAGGCACCACT+GGG | - | chr1.4:48983417-48983436 | MS.gene73546:intron | 40.0% |
| !! | CATGCAAAGAAGGTGTCATT+TGG | - | chr1.4:48983172-48983191 | MS.gene73546:intron | 40.0% |
| !! | GGTGTCATTTGGAACATCAT+TGG | - | chr1.4:48983183-48983202 | MS.gene73546:intron | 40.0% |
| !!! | TGTTTTTTAGTGGCCATACG+AGG | + | chr1.4:48981993-48982012 | None:intergenic | 40.0% |
| ACCAAATGGTCCTGAGAAGT+GGG | - | chr1.4:48981353-48981372 | MS.gene73546:intron | 45.0% | |
| ACCTTGGAGATTAGAGGATC+AGG | + | chr1.4:48982797-48982816 | None:intergenic | 45.0% | |
| AGAGAGGGTTTCATCGATGT+TGG | + | chr1.4:48982063-48982082 | None:intergenic | 45.0% | |
| ATGACACCTTCTTTGCATGG+AGG | + | chr1.4:48983171-48983190 | None:intergenic | 45.0% | |
| ATTGCCCACACGATTCTCAT+TGG | + | chr1.4:48983055-48983074 | None:intergenic | 45.0% | |
| CAGGATCACCCAAATTGTAG+AGG | + | chr1.4:48982778-48982797 | None:intergenic | 45.0% | |
| CGTTTGCAGCATGCTCAAAT+GGG | - | chr1.4:48981391-48981410 | MS.gene73546:intron | 45.0% | |
| CTAGCCAATGAGAATCGTGT+GGG | - | chr1.4:48983048-48983067 | MS.gene73546:intron | 45.0% | |
| CTCCGCTTCATGTCTGTATT+TGG | + | chr1.4:48982702-48982721 | None:intergenic | 45.0% | |
| CTCTACATCAAACGTGCCAA+GGG | + | chr1.4:48983094-48983113 | None:intergenic | 45.0% | |
| GGAGAGAAGAAGAAGAGAGA+GGG | + | chr1.4:48981942-48981961 | None:intergenic | 45.0% | |
| TCCTGATCCTCTAATCTCCA+AGG | - | chr1.4:48982793-48982812 | MS.gene73546:intron | 45.0% | |
| TCGTTTGCAGCATGCTCAAA+TGG | - | chr1.4:48981390-48981409 | MS.gene73546:intron | 45.0% | |
| TGACACCTTCTTTGCATGGA+GGG | + | chr1.4:48983170-48983189 | None:intergenic | 45.0% | |
| TTTGAGCATGCTGCAAACGA+TGG | + | chr1.4:48981390-48981409 | None:intergenic | 45.0% | |
| ! | AAACGTGCCAAGGGCAATTT+TGG | + | chr1.4:48983085-48983104 | None:intergenic | 45.0% |
| ! | ATTAGTCGGTGCCTAGGTAT+CGG | - | chr1.4:48981692-48981711 | MS.gene73546:CDS | 45.0% |
| !!! | AATTTTTTAAAAAAAAGATA+TGG | - | chr1.4:48982317-48982336 | MS.gene73546:intron | 5.0% |
| ACTACCCCTCCATGCAAAGA+AGG | - | chr1.4:48983162-48983181 | MS.gene73546:intron | 50.0% | |
| AGCACAAAGTCCAGTGGAAC+TGG | - | chr1.4:48981416-48981435 | MS.gene73546:intron | 50.0% | |
| CCAAATGGTCCTGAGAAGTG+GGG | - | chr1.4:48981354-48981373 | MS.gene73546:intron | 50.0% | |
| CCTCTACATCAAACGTGCCA+AGG | + | chr1.4:48983095-48983114 | None:intergenic | 50.0% | |
| CCTTGGCACGTTTGATGTAG+AGG | - | chr1.4:48983092-48983111 | MS.gene73546:intron | 50.0% | |
| CTTACAAACGACCATGAGCC+CGG | + | chr1.4:48981911-48981930 | None:intergenic | 50.0% | |
| CTTCTGTGAGGTGAACTAGG+TGG | + | chr1.4:48982727-48982746 | None:intergenic | 50.0% | |
| GACACCTTCTTTGCATGGAG+GGG | + | chr1.4:48983169-48983188 | None:intergenic | 50.0% | |
| GACCAAATGGTCCTGAGAAG+TGG | - | chr1.4:48981352-48981371 | MS.gene73546:intron | 50.0% | |
| GCAGGTTAGGACACTCTCTA+AGG | - | chr1.4:48983386-48983405 | MS.gene73546:CDS | 50.0% | |
| GCTAGCCAATGAGAATCGTG+TGG | - | chr1.4:48983047-48983066 | MS.gene73546:intron | 50.0% | |
| GGGAGAGAAGAAGAAGAGAG+AGG | + | chr1.4:48981943-48981962 | None:intergenic | 50.0% | |
| TAGACCCAACACCGATACCT+AGG | + | chr1.4:48981706-48981725 | None:intergenic | 50.0% | |
| TGCTGAAACTCTACACCCAG+TGG | + | chr1.4:48983435-48983454 | None:intergenic | 50.0% | |
| ! | ATGCTGCAAACGATGGACTC+AGG | + | chr1.4:48981383-48981402 | None:intergenic | 50.0% |
| ! | TGCTGCAAACGATGGACTCA+GGG | + | chr1.4:48981382-48981401 | None:intergenic | 50.0% |
| ! | TGGGAAAGCACAAAGTCCAG+TGG | - | chr1.4:48981410-48981429 | MS.gene73546:intron | 50.0% |
| AGGCCTCTTCAGCCACTGAA+TGG | - | chr1.4:48983462-48983481 | MS.gene73546:intron | 55.0% | |
| CCCCACTTCTCAGGACCATT+TGG | + | chr1.4:48981357-48981376 | None:intergenic | 55.0% | |
| CGACCATTCAGTGGCTGAAG+AGG | + | chr1.4:48983468-48983487 | None:intergenic | 55.0% | |
| !! | GGTGCCTAGGTATCGGTGTT+GGG | - | chr1.4:48981699-48981718 | MS.gene73546:CDS | 55.0% |
| ATCAAGGGCGGTGCCTCGTA+TGG | - | chr1.4:48981977-48981996 | MS.gene73546:CDS | 60.0% | |
| CTCAGGGTTCCCCACTTCTC+AGG | + | chr1.4:48981366-48981385 | None:intergenic | 60.0% | |
| !! | CGGTGCCTAGGTATCGGTGT+TGG | - | chr1.4:48981698-48981717 | MS.gene73546:CDS | 60.0% |
| GGCATGCTCCTGCAGAGCAC+CGG | - | chr1.4:48981889-48981908 | MS.gene73546:intron | 65.0% | |
| ! | GCATGCTCCTGCAGAGCACC+GGG | - | chr1.4:48981890-48981909 | MS.gene73546:intron | 65.0% |
| CCATGAGCCCGGTGCTCTGC+AGG | + | chr1.4:48981900-48981919 | None:intergenic | 70.0% | |
| !! | CCTGCAGAGCACCGGGCTCA+TGG | - | chr1.4:48981897-48981916 | MS.gene73546:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 48981122 | 48983624 | 48981122 | ID=MS.gene73546 |
| chr1.4 | mRNA | 48981122 | 48983624 | 48981122 | ID=MS.gene73546.t1;Parent=MS.gene73546 |
| chr1.4 | exon | 48983555 | 48983624 | 48983555 | ID=MS.gene73546.t1.exon1;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48983555 | 48983624 | 48983555 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48983210 | 48983418 | 48983210 | ID=MS.gene73546.t1.exon2;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48983210 | 48983418 | 48983210 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48982821 | 48982927 | 48982821 | ID=MS.gene73546.t1.exon3;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48982821 | 48982927 | 48982821 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48981932 | 48982037 | 48981932 | ID=MS.gene73546.t1.exon4;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48981932 | 48982037 | 48981932 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48981537 | 48981719 | 48981537 | ID=MS.gene73546.t1.exon5;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48981537 | 48981719 | 48981537 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48981247 | 48981356 | 48981247 | ID=MS.gene73546.t1.exon6;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48981247 | 48981356 | 48981247 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| chr1.4 | exon | 48981122 | 48981164 | 48981122 | ID=MS.gene73546.t1.exon7;Parent=MS.gene73546.t1 |
| chr1.4 | CDS | 48981122 | 48981164 | 48981122 | ID=cds.MS.gene73546.t1;Parent=MS.gene73546.t1 |
| Gene Sequence |
| Protein sequence |
