Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81435.t1 | XP_003617641.1 | 95.3 | 451 | 21 | 0 | 14 | 464 | 110 | 560 | 2.40E-239 | 837.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81435.t1 | Q8S9L5 | 66.1 | 443 | 149 | 1 | 24 | 465 | 105 | 547 | 1.8e-169 | 597.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81435.t1 | G7K8P7 | 95.3 | 451 | 21 | 0 | 14 | 464 | 110 | 560 | 1.8e-239 | 837.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049153 | MS.gene81435 | 0.808277 | 3.35E-50 | -1.69E-46 |
| MS.gene049284 | MS.gene81435 | 0.802459 | 5.56E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene81435 | 0.828175 | 1.04E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene81435 | 0.833278 | 5.85E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene81435 | 0.880301 | 6.14E-70 | -1.69E-46 |
| MS.gene049389 | MS.gene81435 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene81435 | 0.821617 | 3.67E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene81435 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene81435 | 0.8148 | 1.28E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene81435 | 0.817969 | 2.50E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene81435 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene81435 | 0.860993 | 1.40E-63 | -1.69E-46 |
| MS.gene049910 | MS.gene81435 | 0.832836 | 7.53E-56 | -1.69E-46 |
| MS.gene049993 | MS.gene81435 | 0.819237 | 1.29E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene81435 | 0.844799 | 6.04E-59 | -1.69E-46 |
| MS.gene050099 | MS.gene81435 | 0.875997 | 1.98E-68 | -1.69E-46 |
| MS.gene050231 | MS.gene81435 | 0.83258 | 8.72E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene81435 | 0.911998 | 3.22E-83 | -1.69E-46 |
| MS.gene050397 | MS.gene81435 | 0.867513 | 1.30E-65 | -1.69E-46 |
| MS.gene050400 | MS.gene81435 | 0.808301 | 3.31E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene81435 | 0.811818 | 5.79E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene81435 | 0.853283 | 2.65E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene81435 | -0.827981 | 1.16E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene81435 | 0.835414 | 1.70E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene81435 | 0.886925 | 2.24E-72 | -1.69E-46 |
| MS.gene050529 | MS.gene81435 | 0.88111 | 3.15E-70 | -1.69E-46 |
| MS.gene050558 | MS.gene81435 | 0.851148 | 1.07E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene81435 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene81435 | 0.832479 | 9.23E-56 | -1.69E-46 |
| MS.gene050650 | MS.gene81435 | 0.82006 | 8.37E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene81435 | 0.865663 | 5.02E-65 | -1.69E-46 |
| MS.gene050783 | MS.gene81435 | 0.848577 | 5.61E-60 | -1.69E-46 |
| MS.gene050812 | MS.gene81435 | 0.872495 | 3.04E-67 | -1.69E-46 |
| MS.gene05101 | MS.gene81435 | 0.896064 | 5.28E-76 | -1.69E-46 |
| MS.gene05105 | MS.gene81435 | 0.830054 | 3.64E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene81435 | 0.833571 | 4.94E-56 | -1.69E-46 |
| MS.gene051240 | MS.gene81435 | 0.827742 | 1.32E-54 | -1.69E-46 |
| MS.gene051242 | MS.gene81435 | 0.840548 | 8.14E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene81435 | 0.832995 | 6.87E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene81435 | 0.859874 | 3.06E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene81435 | 0.876584 | 1.24E-68 | -1.69E-46 |
| MS.gene051582 | MS.gene81435 | 0.89125 | 4.72E-74 | -1.69E-46 |
| MS.gene051662 | MS.gene81435 | 0.82003 | 8.51E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene81435 | 0.851647 | 7.74E-61 | -1.69E-46 |
| MS.gene051860 | MS.gene81435 | 0.85069 | 1.44E-60 | -1.69E-46 |
| MS.gene051877 | MS.gene81435 | 0.812456 | 4.20E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene81435 | 0.836488 | 9.09E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene81435 | -0.866379 | 2.98E-65 | -1.69E-46 |
| MS.gene052077 | MS.gene81435 | 0.834197 | 3.44E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene81435 | 0.871503 | 6.51E-67 | -1.69E-46 |
| MS.gene052178 | MS.gene81435 | 0.831953 | 1.25E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene81435 | 0.869576 | 2.79E-66 | -1.69E-46 |
| MS.gene052207 | MS.gene81435 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene81435 | 0.870462 | 1.43E-66 | -1.69E-46 |
| MS.gene052310 | MS.gene81435 | 0.88369 | 3.62E-71 | -1.69E-46 |
| MS.gene052322 | MS.gene81435 | 0.83168 | 1.46E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene81435 | 0.857937 | 1.16E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene81435 | 0.87138 | 7.14E-67 | -1.69E-46 |
| MS.gene052481 | MS.gene81435 | 0.833976 | 3.91E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene81435 | 0.852275 | 5.14E-61 | -1.69E-46 |
| MS.gene052600 | MS.gene81435 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene81435 | 0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene81435 | 0.805829 | 1.10E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene81435 | 0.814907 | 1.21E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene81435 | 0.826525 | 2.59E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene81435 | 0.80521 | 1.49E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene81435 | 0.840432 | 8.73E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene81435 | 0.856655 | 2.78E-62 | -1.69E-46 |
| MS.gene053836 | MS.gene81435 | 0.896085 | 5.17E-76 | -1.69E-46 |
| MS.gene053907 | MS.gene81435 | 0.853062 | 3.06E-61 | -1.69E-46 |
| MS.gene053928 | MS.gene81435 | 0.871912 | 4.76E-67 | -1.69E-46 |
| MS.gene053971 | MS.gene81435 | 0.872449 | 3.15E-67 | -1.69E-46 |
| MS.gene054010 | MS.gene81435 | 0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene81435 | 0.816029 | 6.83E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene81435 | 0.823084 | 1.68E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene81435 | 0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene81435 | 0.845948 | 2.95E-59 | -1.69E-46 |
| MS.gene054183 | MS.gene81435 | 0.837076 | 6.43E-57 | -1.69E-46 |
| MS.gene054349 | MS.gene81435 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene81435 | 0.803876 | 2.83E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene81435 | 0.834643 | 2.66E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene81435 | 0.811773 | 5.92E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene81435 | 0.859889 | 3.03E-63 | -1.69E-46 |
| MS.gene054719 | MS.gene81435 | 0.864273 | 1.37E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene81435 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene81435 | 0.820521 | 6.57E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene81435 | 0.821226 | 4.52E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene81435 | 0.837342 | 5.50E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene81435 | 0.836736 | 7.86E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene81435 | 0.868873 | 4.72E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene81435 | 0.886291 | 3.89E-72 | -1.69E-46 |
| MS.gene055369 | MS.gene81435 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene055370 | MS.gene81435 | 0.825564 | 4.38E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene81435 | 0.867316 | 1.50E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene81435 | 0.818502 | 1.90E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene81435 | 0.887533 | 1.31E-72 | -1.69E-46 |
| MS.gene055428 | MS.gene81435 | 0.902019 | 1.49E-78 | -1.69E-46 |
| MS.gene05553 | MS.gene81435 | 0.881279 | 2.74E-70 | -1.69E-46 |
| MS.gene055564 | MS.gene81435 | 0.814326 | 1.63E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene81435 | 0.843959 | 1.02E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene81435 | 0.834711 | 2.56E-56 | -1.69E-46 |
| MS.gene05594 | MS.gene81435 | 0.818565 | 1.83E-52 | -1.69E-46 |
| MS.gene055971 | MS.gene81435 | 0.8544 | 1.26E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene81435 | 0.849069 | 4.10E-60 | -1.69E-46 |
| MS.gene056407 | MS.gene81435 | 0.900349 | 8.01E-78 | -1.69E-46 |
| MS.gene056410 | MS.gene81435 | 0.830747 | 2.47E-55 | -1.69E-46 |
| MS.gene056451 | MS.gene81435 | 0.855266 | 7.08E-62 | -1.69E-46 |
| MS.gene056452 | MS.gene81435 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene81435 | 0.883677 | 3.66E-71 | -1.69E-46 |
| MS.gene056659 | MS.gene81435 | 0.835529 | 1.59E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene81435 | 0.835956 | 1.24E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene81435 | 0.872499 | 3.03E-67 | -1.69E-46 |
| MS.gene056899 | MS.gene81435 | -0.83078 | 2.42E-55 | -1.69E-46 |
| MS.gene056902 | MS.gene81435 | 0.823022 | 1.73E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene81435 | 0.831111 | 2.01E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene81435 | 0.842563 | 2.40E-58 | -1.69E-46 |
| MS.gene05702 | MS.gene81435 | 0.879261 | 1.44E-69 | -1.69E-46 |
| MS.gene057121 | MS.gene81435 | 0.898746 | 3.92E-77 | -1.69E-46 |
| MS.gene057123 | MS.gene81435 | 0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene81435 | 0.807414 | 5.12E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene81435 | 0.82117 | 4.66E-53 | -1.69E-46 |
| MS.gene057196 | MS.gene81435 | 0.811581 | 6.52E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene81435 | 0.843476 | 1.37E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene81435 | 0.825872 | 3.70E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene81435 | 0.823835 | 1.12E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene81435 | 0.841621 | 4.25E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene81435 | 0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene81435 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene81435 | 0.820288 | 7.42E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene81435 | 0.820502 | 6.63E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene81435 | 0.817596 | 3.04E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene81435 | 0.860304 | 2.27E-63 | -1.69E-46 |
| MS.gene057823 | MS.gene81435 | 0.856704 | 2.69E-62 | -1.69E-46 |
| MS.gene057825 | MS.gene81435 | 0.822217 | 2.67E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene81435 | 0.918114 | 2.32E-86 | -1.69E-46 |
| MS.gene058019 | MS.gene81435 | 0.80659 | 7.64E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene81435 | 0.801934 | 7.12E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene81435 | 0.91113 | 8.61E-83 | -1.69E-46 |
| MS.gene058142 | MS.gene81435 | 0.890358 | 1.06E-73 | -1.69E-46 |
| MS.gene058233 | MS.gene81435 | 0.888784 | 4.34E-73 | -1.69E-46 |
| MS.gene058276 | MS.gene81435 | 0.893478 | 6.06E-75 | -1.69E-46 |
| MS.gene058293 | MS.gene81435 | 0.878611 | 2.44E-69 | -1.69E-46 |
| MS.gene058365 | MS.gene81435 | 0.835784 | 1.37E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene81435 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene81435 | 0.888442 | 5.88E-73 | -1.69E-46 |
| MS.gene058700 | MS.gene81435 | 0.825367 | 4.87E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene81435 | 0.807017 | 6.21E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene81435 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene81435 | 0.823763 | 1.16E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene81435 | 0.814258 | 1.69E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene81435 | 0.803749 | 3.01E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene81435 | 0.822161 | 2.75E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene81435 | 0.865094 | 7.57E-65 | -1.69E-46 |
| MS.gene058928 | MS.gene81435 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene81435 | 0.827757 | 1.31E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene81435 | 0.803019 | 4.26E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene81435 | 0.922629 | 7.67E-89 | -1.69E-46 |
| MS.gene059141 | MS.gene81435 | 0.864323 | 1.32E-64 | -1.69E-46 |
| MS.gene059247 | MS.gene81435 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene81435 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene81435 | 0.813222 | 2.86E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene81435 | 0.813477 | 2.51E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene81435 | 0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene81435 | 0.864356 | 1.29E-64 | -1.69E-46 |
| MS.gene059462 | MS.gene81435 | 0.800345 | 1.51E-48 | -1.69E-46 |
| MS.gene059518 | MS.gene81435 | 0.867524 | 1.28E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene81435 | 0.813451 | 2.54E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene81435 | 0.875048 | 4.19E-68 | -1.69E-46 |
| MS.gene05959 | MS.gene81435 | 0.83174 | 1.41E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene81435 | 0.882333 | 1.14E-70 | -1.69E-46 |
| MS.gene059688 | MS.gene81435 | 0.866166 | 3.48E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene81435 | 0.872538 | 2.94E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene81435 | 0.872539 | 2.94E-67 | -1.69E-46 |
| MS.gene05984 | MS.gene81435 | 0.881186 | 2.96E-70 | -1.69E-46 |
| MS.gene059894 | MS.gene81435 | 0.877374 | 6.61E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene81435 | 0.830293 | 3.19E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene81435 | 0.833334 | 5.66E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene81435 | 0.839633 | 1.41E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene81435 | 0.883489 | 4.30E-71 | -1.69E-46 |
| MS.gene06090 | MS.gene81435 | 0.869322 | 3.38E-66 | -1.69E-46 |
| MS.gene060986 | MS.gene81435 | 0.808245 | 3.40E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene81435 | 0.888489 | 5.64E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene81435 | -0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene81435 | 0.839454 | 1.57E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene81435 | 0.839596 | 1.44E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81435.t1 | MTR_5g093830 | 95.344 | 451 | 21 | 0 | 14 | 464 | 110 | 560 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81435.t1 | AT5G55220 | 66.140 | 443 | 149 | 1 | 24 | 465 | 105 | 547 | 0.0 | 626 |
Find 77 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCCTTGATTCTATAAT+TGG | 0.141614 | 5.3:+76018971 | MS.gene81435:CDS |
| TCAGAAATCCATTTAATTTC+TGG | 0.168583 | 5.3:-76018285 | None:intergenic |
| ATGTTGCACCAGAAATTAAA+TGG | 0.259733 | 5.3:+76018277 | MS.gene81435:CDS |
| ATTATTCTCTCGGATATCTT+AGG | 0.278137 | 5.3:+76018032 | MS.gene81435:CDS |
| TCAATACCTGCATTTCTAAT+AGG | 0.299634 | 5.3:-76019917 | None:intergenic |
| GGTTACTGGAAGGGCTTTGC+AGG | 0.317659 | 5.3:+76017964 | MS.gene81435:intron |
| CTTGATTCTATAATTGGAAT+TGG | 0.335719 | 5.3:+76018977 | MS.gene81435:CDS |
| AAGATATCCGAGAGAATAAT+AGG | 0.339434 | 5.3:-76018029 | None:intergenic |
| TATATTAGATCAGATTTCTA+AGG | 0.345020 | 5.3:+76019589 | MS.gene81435:CDS |
| TAGCTGTTTGCTCTATCTCT+TGG | 0.360719 | 5.3:-76019544 | None:intergenic |
| AGTATTCTTGTTGGTTATGT+GGG | 0.365092 | 5.3:+76017398 | MS.gene81435:CDS |
| AGATATTCATTCACGGACTT+TGG | 0.385184 | 5.3:-76020112 | None:intergenic |
| TGGCAGTTGGTGACATATAT+AGG | 0.388142 | 5.3:+76020179 | MS.gene81435:CDS |
| TAACCAACAAGAATACTTTC+CGG | 0.396552 | 5.3:-76017392 | None:intergenic |
| GAACAAGGTAGACAGCTATA+TGG | 0.427214 | 5.3:+76019888 | MS.gene81435:CDS |
| AACCAACAAGAATACTTTCC+GGG | 0.427325 | 5.3:-76017391 | None:intergenic |
| TGGATGTACCACAGTGCAAC+AGG | 0.439789 | 5.3:+76019393 | MS.gene81435:CDS |
| AAGTATTCTTGTTGGTTATG+TGG | 0.444352 | 5.3:+76017397 | MS.gene81435:CDS |
| GTCCCGGAAAGTATTCTTGT+TGG | 0.452137 | 5.3:+76017389 | MS.gene81435:CDS |
| CGAACTTTGTAAACTCAACT+AGG | 0.456526 | 5.3:-76017009 | None:intergenic |
| TTACAGAGATTTACCAGAGC+TGG | 0.456759 | 5.3:+76019342 | MS.gene81435:CDS |
| TGTTGCACTGTGGTACATCC+AGG | 0.475737 | 5.3:-76019391 | None:intergenic |
| CGAGGAACGTGTAAAGGAAC+AGG | 0.479197 | 5.3:+76020526 | MS.gene81435:CDS |
| TGAATATCTTGAGCATCATA+AGG | 0.481148 | 5.3:+76020126 | MS.gene81435:CDS |
| TACCTGCATTTCTAATAGGC+TGG | 0.492031 | 5.3:-76019913 | None:intergenic |
| AAAACTAACTGAAGAGCAGC+TGG | 0.495940 | 5.3:+76020075 | MS.gene81435:CDS |
| ATCCAGCCTATTAGAAATGC+AGG | 0.500445 | 5.3:+76019911 | MS.gene81435:CDS |
| ATACGACGAGGAACGTGTAA+AGG | 0.502907 | 5.3:+76020520 | MS.gene81435:CDS |
| ATTCCTTCTGCTGAAAGTAA+AGG | 0.519175 | 5.3:+76018801 | MS.gene81435:CDS |
| CTTGCACCTACACTCTTCCA+TGG | 0.520421 | 5.3:-76016835 | None:intergenic |
| GAGGATACCTATTATTCTCT+CGG | 0.520497 | 5.3:+76018022 | MS.gene81435:CDS |
| TGTTACTGACAGAGGACTAC+AGG | 0.522402 | 5.3:+76018422 | MS.gene81435:CDS |
| AAGGAGCTAAGGTGCTAGAA+TGG | 0.522425 | 5.3:+76020987 | MS.gene81435:CDS |
| GCAATAGAATCATCCAGCTC+TGG | 0.523626 | 5.3:-76019355 | None:intergenic |
| CTACCTTTACTTTCAGCAGA+AGG | 0.525053 | 5.3:-76018804 | None:intergenic |
| TCTATAATTGGAATTGGTCG+AGG | 0.525412 | 5.3:+76018983 | MS.gene81435:CDS |
| AGAAGGCGTTACAAGTCAGC+TGG | 0.527767 | 5.3:+76018387 | MS.gene81435:CDS |
| AAGAGATAGAGCAAACAGCT+AGG | 0.529180 | 5.3:+76019546 | MS.gene81435:CDS |
| CAATTCCAATTATAGAATCA+AGG | 0.531449 | 5.3:-76018976 | None:intergenic |
| GATATTTGATTCTTGATCAA+CGG | 0.532623 | 5.3:-76018772 | None:intergenic |
| TATATATGTCACCAACTGCC+AGG | 0.537928 | 5.3:-76020177 | None:intergenic |
| CAGGTACCTGGATTTCGTCC+TGG | 0.538561 | 5.3:+76017359 | MS.gene81435:intron |
| ATTGCTGATAAACTTATCCC+TGG | 0.539379 | 5.3:+76019373 | MS.gene81435:CDS |
| TGTTCATCAAACAAGGATTG+AGG | 0.541311 | 5.3:-76019870 | None:intergenic |
| ATGCTCAAGATATTCATTCA+CGG | 0.543020 | 5.3:-76020119 | None:intergenic |
| AAGGTTCAAGAAATACTAGA+AGG | 0.544740 | 5.3:+76020968 | MS.gene81435:intron |
| GCATGTGGAGGTACCATCAC+TGG | 0.547973 | 5.3:+76016961 | MS.gene81435:CDS |
| CAATCCTTGTTTGATGAACA+AGG | 0.549416 | 5.3:+76019873 | MS.gene81435:CDS |
| ATCAAACAGAACCTGGCAGT+TGG | 0.559239 | 5.3:+76020166 | MS.gene81435:CDS |
| AGAAATACTAGAAGGAGCTA+AGG | 0.563256 | 5.3:+76020976 | MS.gene81435:CDS |
| TTGACGTTTGAATTCAGCAA+TGG | 0.576175 | 5.3:-76020489 | None:intergenic |
| ATATAGGCGTGAAAATATGC+AGG | 0.579562 | 5.3:+76020195 | MS.gene81435:CDS |
| TTGTTTCCATGGAAGAGTGT+AGG | 0.581241 | 5.3:+76016829 | None:intergenic |
| AAATTTGATCAAACAGAACC+TGG | 0.587535 | 5.3:+76020159 | MS.gene81435:CDS |
| GTATTCTTGTTGGTTATGTG+GGG | 0.588330 | 5.3:+76017399 | MS.gene81435:CDS |
| CTACGATCGAATCAATATTG+AGG | 0.589271 | 5.3:+76017441 | MS.gene81435:CDS |
| AGAGATAGAGCAAACAGCTA+GGG | 0.589916 | 5.3:+76019547 | MS.gene81435:CDS |
| TCTACCTTGTTCATCAAACA+AGG | 0.591447 | 5.3:-76019877 | None:intergenic |
| ATGCGAGGACTGTTACGAAA+GGG | 0.596481 | 5.3:+76016985 | MS.gene81435:CDS |
| ATTATAGAATCAAGGAAACC+TGG | 0.599565 | 5.3:-76018968 | None:intergenic |
| TGAGTTTACAAAGTTCGCCA+AGG | 0.601858 | 5.3:+76017015 | MS.gene81435:CDS |
| CTTAAGAGAAGATAATGCTA+AGG | 0.602334 | 5.3:+76016893 | MS.gene81435:CDS |
| CAGTCCTCGCATACCAGTGA+TGG | 0.604531 | 5.3:-76016974 | None:intergenic |
| TCTTTGATGATGTCTTCAGT+AGG | 0.610103 | 5.3:-76020455 | None:intergenic |
| TAAACTGAGCATGAACACCT+TGG | 0.610469 | 5.3:-76019060 | None:intergenic |
| TACTGAAGACATCATCAAAG+AGG | 0.612818 | 5.3:+76020457 | MS.gene81435:CDS |
| GATGGTGAAATATTAGTACC+AGG | 0.615164 | 5.3:+76018950 | MS.gene81435:CDS |
| ACTTTCACACGCTGTAACAG+CGG | 0.616868 | 5.3:+76017469 | MS.gene81435:CDS |
| CTGAAAGTTGTTACTGACAG+AGG | 0.619184 | 5.3:+76018414 | MS.gene81435:CDS |
| CCTGCAGGTTAGATTGCATG+TGG | 0.627284 | 5.3:+76016946 | MS.gene81435:intron |
| TATGCGAGGACTGTTACGAA+AGG | 0.650131 | 5.3:+76016984 | MS.gene81435:CDS |
| GTTGCACTGTGGTACATCCA+GGG | 0.654086 | 5.3:-76019390 | None:intergenic |
| CGATCGAATCAATATTGAGG+AGG | 0.656634 | 5.3:+76017444 | MS.gene81435:CDS |
| TGGAAGCAGGAAAATCTCCA+AGG | 0.665686 | 5.3:+76019043 | MS.gene81435:CDS |
| GCAGGTTAGATTGCATGTGG+AGG | 0.673127 | 5.3:+76016949 | MS.gene81435:intron |
| GGTACCATCACTGGTATGCG+AGG | 0.674391 | 5.3:+76016970 | MS.gene81435:CDS |
| AAAAGTCACCTGTTGCACTG+TGG | 0.753690 | 5.3:-76019401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATTTGTTCTTATT+TGG | + | chr5.3:76020025-76020044 | MS.gene81435:intron | 10.0% |
| !!! | GTACATAATATTTTTTATTT+CGG | - | chr5.3:76020636-76020655 | None:intergenic | 10.0% |
| !!! | TATAATCAATTTTGTTTTAT+AGG | + | chr5.3:76017943-76017962 | MS.gene81435:intron | 10.0% |
| !! | AAAATACATATAAAAGGAAA+TGG | - | chr5.3:76018666-76018685 | None:intergenic | 15.0% |
| !! | AGTCTATTTAGTAAATTATT+TGG | + | chr5.3:76020391-76020410 | MS.gene81435:intron | 15.0% |
| !! | TATCAATCAATCTTTAAATT+AGG | - | chr5.3:76020927-76020946 | None:intergenic | 15.0% |
| !!! | TTCTAAATAATGGAATATAA+AGG | + | chr5.3:76020745-76020764 | MS.gene81435:intron | 15.0% |
| !!! | TTTTTTTTTCCTTTAAATGT+TGG | - | chr5.3:76019985-76020004 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTTCTTTTTC+TGG | + | chr5.3:76019758-76019777 | MS.gene81435:intron | 15.0% |
| !! | AAAAAAAATACTATGCAAGT+AGG | - | chr5.3:76020694-76020713 | None:intergenic | 20.0% |
| !! | AAAGTTATTACTGAAAAATG+TGG | + | chr5.3:76017877-76017896 | MS.gene81435:intron | 20.0% |
| !! | ATACTCATAAAATAGAGAAA+AGG | + | chr5.3:76018141-76018160 | MS.gene81435:intron | 20.0% |
| !! | ATGATTTCTGATATCTAAAT+TGG | + | chr5.3:76017159-76017178 | MS.gene81435:intron | 20.0% |
| !! | GAGATGTATATTCTAAATAA+TGG | + | chr5.3:76020735-76020754 | MS.gene81435:intron | 20.0% |
| !! | TAGTAAACTTGTATATGATA+TGG | - | chr5.3:76017263-76017282 | None:intergenic | 20.0% |
| !! | TATATTAGATCAGATTTCTA+AGG | + | chr5.3:76019589-76019608 | MS.gene81435:CDS | 20.0% |
| !! | TTAAGAAACCACATTAAAAA+TGG | - | chr5.3:76018498-76018517 | None:intergenic | 20.0% |
| !! | TTTATGAGTATAGATAACTT+TGG | - | chr5.3:76018132-76018151 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAGGTTAC+TGG | + | chr5.3:76017950-76017969 | MS.gene81435:intron | 20.0% |
| !!! | ACATTTTTCAGTAATAACTT+TGG | - | chr5.3:76017878-76017897 | None:intergenic | 20.0% |
| !!! | AGTTACTAAATTTTCTGATA+TGG | + | chr5.3:76018000-76018019 | MS.gene81435:CDS | 20.0% |
| !!! | ATTATGTACCGTTTTTAAAA+TGG | + | chr5.3:76020647-76020666 | MS.gene81435:intron | 20.0% |
| !!! | ATTGTTCTTAGTTTGTATTT+GGG | - | chr5.3:76020780-76020799 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCCATTTTTAATG+TGG | + | chr5.3:76018487-76018506 | MS.gene81435:intron | 20.0% |
| !!! | TTTTCTGAATGAATTTTGTT+TGG | - | chr5.3:76017105-76017124 | None:intergenic | 20.0% |
| ! | AAAACATTCATGAGGAAATA+TGG | - | chr5.3:76018602-76018621 | None:intergenic | 25.0% |
| ! | AAAACTATTATGCTGTATGT+TGG | - | chr5.3:76019137-76019156 | None:intergenic | 25.0% |
| ! | AAACTTGTATATGATATGGT+AGG | - | chr5.3:76017259-76017278 | None:intergenic | 25.0% |
| ! | AACTTGTATATGATATGGTA+GGG | - | chr5.3:76017258-76017277 | None:intergenic | 25.0% |
| ! | AGCATAAATCAATAATACCT+TGG | - | chr5.3:76017035-76017054 | None:intergenic | 25.0% |
| ! | ATCTATTTGAACTTTCTTGA+AGG | + | chr5.3:76020949-76020968 | MS.gene81435:intron | 25.0% |
| ! | ATTTCTGATATCTAAATTGG+AGG | + | chr5.3:76017162-76017181 | MS.gene81435:intron | 25.0% |
| ! | CAAATACAAACTAAGAACAA+TGG | + | chr5.3:76020779-76020798 | MS.gene81435:intron | 25.0% |
| ! | CAATTCCAATTATAGAATCA+AGG | - | chr5.3:76018979-76018998 | None:intergenic | 25.0% |
| ! | CATCTGAAAAAGAATTTAGA+AGG | + | chr5.3:76018370-76018389 | MS.gene81435:CDS | 25.0% |
| ! | CTTGATTCTATAATTGGAAT+TGG | + | chr5.3:76018977-76018996 | MS.gene81435:CDS | 25.0% |
| ! | GACTAAATAAAACATTCATG+AGG | - | chr5.3:76018610-76018629 | None:intergenic | 25.0% |
| ! | GATATTTGATTCTTGATCAA+CGG | - | chr5.3:76018775-76018794 | None:intergenic | 25.0% |
| ! | GTAAATATGATGAATATGAC+TGG | - | chr5.3:76017639-76017658 | None:intergenic | 25.0% |
| ! | TAAGGTAACATTACATCATT+AGG | + | chr5.3:76019607-76019626 | MS.gene81435:intron | 25.0% |
| ! | TCACATACATGTATAGTTTA+TGG | + | chr5.3:76019186-76019205 | MS.gene81435:intron | 25.0% |
| ! | TTCTATACAAATAGTTACTC+AGG | + | chr5.3:76020243-76020262 | MS.gene81435:intron | 25.0% |
| !! | ATTCATATTGTCATTTCAGA+TGG | + | chr5.3:76019833-76019852 | MS.gene81435:intron | 25.0% |
| !! | ATTTGTGATAGCAGTTATTT+TGG | + | chr5.3:76018857-76018876 | MS.gene81435:intron | 25.0% |
| !! | CAGCATAATAGTTTTTCTTT+TGG | + | chr5.3:76019142-76019161 | MS.gene81435:intron | 25.0% |
| !! | TAACAATGTTTTACTTCAAC+AGG | + | chr5.3:76017340-76017359 | MS.gene81435:intron | 25.0% |
| !! | TACTAAATTTTCTGATATGG+AGG | + | chr5.3:76018003-76018022 | MS.gene81435:CDS | 25.0% |
| !! | TACTGAAAAATGTGGATTAT+TGG | + | chr5.3:76017885-76017904 | MS.gene81435:intron | 25.0% |
| !! | TATACACTCATATCATCTTT+TGG | - | chr5.3:76020297-76020316 | None:intergenic | 25.0% |
| !! | TCAGAAATCCATTTAATTTC+TGG | - | chr5.3:76018288-76018307 | None:intergenic | 25.0% |
| !!! | CATTGTTCTTAGTTTGTATT+TGG | - | chr5.3:76020781-76020800 | None:intergenic | 25.0% |
| !!! | GGTTGCATTTTTCAATTTTA+AGG | + | chr5.3:76020871-76020890 | MS.gene81435:intron | 25.0% |
| !!! | TTAGCTTTTTAGACAATGTT+GGG | + | chr5.3:76017545-76017564 | MS.gene81435:intron | 25.0% |
| !!! | TTGTGCGTATTTAATTTTAC+AGG | + | chr5.3:76018713-76018732 | MS.gene81435:intron | 25.0% |
| !!! | TTTGTGATAGCAGTTATTTT+GGG | + | chr5.3:76018858-76018877 | MS.gene81435:intron | 25.0% |
| AAACATCATACTATGTATGC+AGG | + | chr5.3:76018908-76018927 | MS.gene81435:intron | 30.0% | |
| AAATTTGATCAAACAGAACC+TGG | + | chr5.3:76020159-76020178 | MS.gene81435:CDS | 30.0% | |
| AAGATATCCGAGAGAATAAT+AGG | - | chr5.3:76018032-76018051 | None:intergenic | 30.0% | |
| AAGGTTCAAGAAATACTAGA+AGG | + | chr5.3:76020968-76020987 | MS.gene81435:intron | 30.0% | |
| AATAACTTTGGACAAACGAT+TGG | - | chr5.3:76017866-76017885 | None:intergenic | 30.0% | |
| ACTTGGATTCCAACATTTAA+AGG | + | chr5.3:76019973-76019992 | MS.gene81435:intron | 30.0% | |
| AGCAAGCAAATTCAAAAGTA+AGG | - | chr5.3:76020558-76020577 | None:intergenic | 30.0% | |
| ATAACAGACTCAAAAAAAGG+AGG | - | chr5.3:76018108-76018127 | None:intergenic | 30.0% | |
| ATACATGTATGTGAACAAGT+TGG | - | chr5.3:76019180-76019199 | None:intergenic | 30.0% | |
| ATAGATTCTGAACACTTGTT+TGG | - | chr5.3:76018579-76018598 | None:intergenic | 30.0% | |
| ATATATTTATGCTATCCTGC+AGG | + | chr5.3:76016931-76016950 | MS.gene81435:intron | 30.0% | |
| ATGCTCAAGATATTCATTCA+CGG | - | chr5.3:76020122-76020141 | None:intergenic | 30.0% | |
| ATGTTGCACCAGAAATTAAA+TGG | + | chr5.3:76018277-76018296 | MS.gene81435:CDS | 30.0% | |
| ATTATAGAATCAAGGAAACC+TGG | - | chr5.3:76018971-76018990 | None:intergenic | 30.0% | |
| ATTATTCTCTCGGATATCTT+AGG | + | chr5.3:76018032-76018051 | MS.gene81435:CDS | 30.0% | |
| CATATCGAAAAAATGTTGTG+AGG | - | chr5.3:76019679-76019698 | None:intergenic | 30.0% | |
| CGTACTATAAAGATGTTTGT+TGG | + | chr5.3:76017672-76017691 | MS.gene81435:intron | 30.0% | |
| CTTAAGAGAAGATAATGCTA+AGG | + | chr5.3:76016893-76016912 | MS.gene81435:CDS | 30.0% | |
| CTTTATCCAATCAGAAAACT+TGG | + | chr5.3:76019956-76019975 | MS.gene81435:intron | 30.0% | |
| GAATTGTGAGTAAAATTCTC+CGG | + | chr5.3:76019482-76019501 | MS.gene81435:intron | 30.0% | |
| GGTATAACAGACTCAAAAAA+AGG | - | chr5.3:76018111-76018130 | None:intergenic | 30.0% | |
| GGTTTCCTTGATTCTATAAT+TGG | + | chr5.3:76018971-76018990 | MS.gene81435:CDS | 30.0% | |
| TAACCAACAAGAATACTTTC+CGG | - | chr5.3:76017395-76017414 | None:intergenic | 30.0% | |
| TCAATACCTGCATTTCTAAT+AGG | - | chr5.3:76019920-76019939 | None:intergenic | 30.0% | |
| TGAATATCTTGAGCATCATA+AGG | + | chr5.3:76020126-76020145 | MS.gene81435:CDS | 30.0% | |
| TGATGCATACAAAAACTTGA+AGG | + | chr5.3:76018308-76018327 | MS.gene81435:CDS | 30.0% | |
| ! | AAGTATTCTTGTTGGTTATG+TGG | + | chr5.3:76017397-76017416 | MS.gene81435:CDS | 30.0% |
| ! | AGTATTCTTGTTGGTTATGT+GGG | + | chr5.3:76017398-76017417 | MS.gene81435:CDS | 30.0% |
| ! | CAGCATGTTTTCTTAAAAGA+GGG | - | chr5.3:76017291-76017310 | None:intergenic | 30.0% |
| ! | CTCACACAATTTTACTATCA+TGG | - | chr5.3:76017754-76017773 | None:intergenic | 30.0% |
| ! | TCATATCATCTTTTGGCAAT+GGG | - | chr5.3:76020290-76020309 | None:intergenic | 30.0% |
| ! | TGTTTTATAGGTTACTGGAA+GGG | + | chr5.3:76017955-76017974 | MS.gene81435:intron | 30.0% |
| !! | AGGATTCAATTTTGATACAG+AGG | + | chr5.3:76018928-76018947 | MS.gene81435:intron | 30.0% |
| !! | GCGTATTTAATTTTACAGGT+CGG | + | chr5.3:76018717-76018736 | MS.gene81435:intron | 30.0% |
| !! | TACACGGTCCATTTTAAAAA+CGG | - | chr5.3:76020658-76020677 | None:intergenic | 30.0% |
| !! | TTCAATTTTGATACAGAGGA+TGG | + | chr5.3:76018932-76018951 | MS.gene81435:CDS | 30.0% |
| !! | TTGTGATAGCAGTTATTTTG+GGG | + | chr5.3:76018859-76018878 | MS.gene81435:intron | 30.0% |
| !! | TTGTTTTATAGGTTACTGGA+AGG | + | chr5.3:76017954-76017973 | MS.gene81435:intron | 30.0% |
| !!! | GTTAGCTTTTTAGACAATGT+TGG | + | chr5.3:76017544-76017563 | MS.gene81435:intron | 30.0% |
| !!! | TCTCTTTTTGCTGTTTCAAA+AGG | - | chr5.3:76020719-76020738 | None:intergenic | 30.0% |
| !!! | TGAATGTTTTATTTAGTCGC+AGG | + | chr5.3:76018612-76018631 | MS.gene81435:intron | 30.0% |
| !!! | TTTTTAAAATGGACCGTGTA+GGG | + | chr5.3:76020658-76020677 | MS.gene81435:intron | 30.0% |
| AACCAACAAGAATACTTTCC+GGG | - | chr5.3:76017394-76017413 | None:intergenic | 35.0% | |
| AAGATACCGTGTAATCCTTT+CGG | - | chr5.3:76020809-76020828 | None:intergenic | 35.0% | |
| AATGAAATGCCTTTGACATG+AGG | + | chr5.3:76017785-76017804 | MS.gene81435:intron | 35.0% | |
| ACTATGACAATTGCACTTGA+GGG | - | chr5.3:76019430-76019449 | None:intergenic | 35.0% | |
| AGAAATACTAGAAGGAGCTA+AGG | + | chr5.3:76020976-76020995 | MS.gene81435:CDS | 35.0% | |
| AGATATTCATTCACGGACTT+TGG | - | chr5.3:76020115-76020134 | None:intergenic | 35.0% | |
| ATATAGGCGTGAAAATATGC+AGG | + | chr5.3:76020195-76020214 | MS.gene81435:CDS | 35.0% | |
| ATGTTTCAGGAAAAACAAGG+GGG | - | chr5.3:76019024-76019043 | None:intergenic | 35.0% | |
| ATTCCTTCTGCTGAAAGTAA+AGG | + | chr5.3:76018801-76018820 | MS.gene81435:CDS | 35.0% | |
| ATTGCTGATAAACTTATCCC+TGG | + | chr5.3:76019373-76019392 | MS.gene81435:CDS | 35.0% | |
| CATACACAAACACAGATCAA+AGG | - | chr5.3:76019240-76019259 | None:intergenic | 35.0% | |
| CATGTTTCAGGAAAAACAAG+GGG | - | chr5.3:76019025-76019044 | None:intergenic | 35.0% | |
| CCATGTTTCAGGAAAAACAA+GGG | - | chr5.3:76019026-76019045 | None:intergenic | 35.0% | |
| CGAACTTTGTAAACTCAACT+AGG | - | chr5.3:76017012-76017031 | None:intergenic | 35.0% | |
| CTAACAATAAGTCTTTGACC+TGG | - | chr5.3:76019517-76019536 | None:intergenic | 35.0% | |
| CTACGATCGAATCAATATTG+AGG | + | chr5.3:76017441-76017460 | MS.gene81435:CDS | 35.0% | |
| CTCAATCAGATTAAACTGAG+TGG | - | chr5.3:76020324-76020343 | None:intergenic | 35.0% | |
| GAAACACATCATTATGCACA+AGG | - | chr5.3:76019715-76019734 | None:intergenic | 35.0% | |
| GAAGCTAGAGAACAACATAT+AGG | - | chr5.3:76020436-76020455 | None:intergenic | 35.0% | |
| GAGGATACCTATTATTCTCT+CGG | + | chr5.3:76018022-76018041 | MS.gene81435:CDS | 35.0% | |
| GATGGTGAAATATTAGTACC+AGG | + | chr5.3:76018950-76018969 | MS.gene81435:CDS | 35.0% | |
| GCTTCTCTTTCATTTCTAAC+AGG | + | chr5.3:76019300-76019319 | MS.gene81435:intron | 35.0% | |
| GGGGAGTAAAAATGTTCAAA+AGG | + | chr5.3:76017418-76017437 | MS.gene81435:CDS | 35.0% | |
| TAACATCAAGAAAGAACGCA+AGG | - | chr5.3:76017528-76017547 | None:intergenic | 35.0% | |
| TACTATGACAATTGCACTTG+AGG | - | chr5.3:76019431-76019450 | None:intergenic | 35.0% | |
| TACTGAAGACATCATCAAAG+AGG | + | chr5.3:76020457-76020476 | MS.gene81435:CDS | 35.0% | |
| TATCATGGACATCGATAATG+TGG | - | chr5.3:76017739-76017758 | None:intergenic | 35.0% | |
| TCAAAAACAAGAATACGACG+AGG | + | chr5.3:76020508-76020527 | MS.gene81435:CDS | 35.0% | |
| TCCATGTTTCAGGAAAAACA+AGG | - | chr5.3:76019027-76019046 | None:intergenic | 35.0% | |
| TCTACCTTGTTCATCAAACA+AGG | - | chr5.3:76019880-76019899 | None:intergenic | 35.0% | |
| TCTATAATTGGAATTGGTCG+AGG | + | chr5.3:76018983-76019002 | MS.gene81435:CDS | 35.0% | |
| TCTCTTCCATGCAAAATTTG+AGG | + | chr5.3:76017202-76017221 | MS.gene81435:intron | 35.0% | |
| TGCTTCCGTTAAAGTTCAAT+GGG | - | chr5.3:76019271-76019290 | None:intergenic | 35.0% | |
| TGTTCATCAAACAAGGATTG+AGG | - | chr5.3:76019873-76019892 | None:intergenic | 35.0% | |
| TTGACGTTTGAATTCAGCAA+TGG | - | chr5.3:76020492-76020511 | None:intergenic | 35.0% | |
| TTGCTTCCGTTAAAGTTCAA+TGG | - | chr5.3:76019272-76019291 | None:intergenic | 35.0% | |
| TTGTGAGGTACATTCTAATC+TGG | - | chr5.3:76019664-76019683 | None:intergenic | 35.0% | |
| TTTGTAGGCAATGGTAGTTT+AGG | + | chr5.3:76020850-76020869 | MS.gene81435:intron | 35.0% | |
| ! | CAATCCTTGTTTGATGAACA+AGG | + | chr5.3:76019873-76019892 | MS.gene81435:CDS | 35.0% |
| ! | CAGTAACCTCAAATTTTGCA+TGG | - | chr5.3:76017211-76017230 | None:intergenic | 35.0% |
| ! | CTCATATCATCTTTTGGCAA+TGG | - | chr5.3:76020291-76020310 | None:intergenic | 35.0% |
| ! | GCAGCATGTTTTCTTAAAAG+AGG | - | chr5.3:76017292-76017311 | None:intergenic | 35.0% |
| ! | GTATTCTTGTTGGTTATGTG+GGG | + | chr5.3:76017399-76017418 | MS.gene81435:CDS | 35.0% |
| ! | TCACTTCATTTTGTAGGCAA+TGG | + | chr5.3:76020841-76020860 | MS.gene81435:intron | 35.0% |
| ! | TGGAATCCAAGTTTTCTGAT+TGG | - | chr5.3:76019965-76019984 | None:intergenic | 35.0% |
| !! | ATGCAGGTATTGATTCAAGT+AGG | + | chr5.3:76019927-76019946 | MS.gene81435:intron | 35.0% |
| !! | TCATGTCAAAGGCATTTCAT+TGG | - | chr5.3:76017786-76017805 | None:intergenic | 35.0% |
| !! | TCTTTGATGATGTCTTCAGT+AGG | - | chr5.3:76020458-76020477 | None:intergenic | 35.0% |
| !!! | CTCGCTTATTTCACTTTTTC+AGG | + | chr5.3:76018238-76018257 | MS.gene81435:intron | 35.0% |
| !!! | GTTTTTAAAATGGACCGTGT+AGG | + | chr5.3:76020657-76020676 | MS.gene81435:intron | 35.0% |
| AAAACTAACTGAAGAGCAGC+TGG | + | chr5.3:76020075-76020094 | MS.gene81435:CDS | 40.0% | |
| AACAGCGGTATGTTGTAATC+TGG | + | chr5.3:76017484-76017503 | MS.gene81435:intron | 40.0% | |
| AAGAACAATGGCTATCCGAA+AGG | + | chr5.3:76020791-76020810 | MS.gene81435:intron | 40.0% | |
| AAGAGATAGAGCAAACAGCT+AGG | + | chr5.3:76019546-76019565 | MS.gene81435:CDS | 40.0% | |
| ACAAGTGTCAGTTAGTTGAC+TGG | - | chr5.3:76018467-76018486 | None:intergenic | 40.0% | |
| ACGAGCCCATTGAACTTTAA+CGG | + | chr5.3:76019263-76019282 | MS.gene81435:intron | 40.0% | |
| AGAGATAGAGCAAACAGCTA+GGG | + | chr5.3:76019547-76019566 | MS.gene81435:CDS | 40.0% | |
| ATCCAGCCTATTAGAAATGC+AGG | + | chr5.3:76019911-76019930 | MS.gene81435:CDS | 40.0% | |
| ATCTGCAGTGTAGAAGTCAT+CGG | - | chr5.3:76018199-76018218 | None:intergenic | 40.0% | |
| CATGAGTGATTCCTTGATCA+TGG | + | chr5.3:76017595-76017614 | MS.gene81435:intron | 40.0% | |
| CATGATCAAGGAATCACTCA+TGG | - | chr5.3:76017597-76017616 | None:intergenic | 40.0% | |
| CGATCGAATCAATATTGAGG+AGG | + | chr5.3:76017444-76017463 | MS.gene81435:CDS | 40.0% | |
| CTACCTTTACTTTCAGCAGA+AGG | - | chr5.3:76018807-76018826 | None:intergenic | 40.0% | |
| CTGAAAGTTGTTACTGACAG+AGG | + | chr5.3:76018414-76018433 | MS.gene81435:CDS | 40.0% | |
| CTGTTTACTAGCCATGATCA+AGG | - | chr5.3:76017609-76017628 | None:intergenic | 40.0% | |
| CTTCTGCTGAAAGTAAAGGT+AGG | + | chr5.3:76018805-76018824 | MS.gene81435:intron | 40.0% | |
| GAACAAGGTAGACAGCTATA+TGG | + | chr5.3:76019888-76019907 | MS.gene81435:CDS | 40.0% | |
| GTAACAAGTCCTCATGTCAA+AGG | - | chr5.3:76017797-76017816 | None:intergenic | 40.0% | |
| TAAACTGAGCATGAACACCT+TGG | - | chr5.3:76019063-76019082 | None:intergenic | 40.0% | |
| TACCTGCATTTCTAATAGGC+TGG | - | chr5.3:76019916-76019935 | None:intergenic | 40.0% | |
| TAGCTGTTTGCTCTATCTCT+TGG | - | chr5.3:76019547-76019566 | None:intergenic | 40.0% | |
| TAGGTGATGTGCTTGCAAAA+TGG | + | chr5.3:76018824-76018843 | MS.gene81435:intron | 40.0% | |
| TATATATGTCACCAACTGCC+AGG | - | chr5.3:76020180-76020199 | None:intergenic | 40.0% | |
| TGAGTTTACAAAGTTCGCCA+AGG | + | chr5.3:76017015-76017034 | MS.gene81435:CDS | 40.0% | |
| TGGACATCGATAATGTGGAA+TGG | - | chr5.3:76017734-76017753 | None:intergenic | 40.0% | |
| TGGATTTCGTCCTGGAAAAA+AGG | + | chr5.3:76017367-76017386 | MS.gene81435:CDS | 40.0% | |
| TTACAGAGATTTACCAGAGC+TGG | + | chr5.3:76019342-76019361 | MS.gene81435:CDS | 40.0% | |
| TTGTGTTAGTGCAATGTGCA+TGG | - | chr5.3:76017699-76017718 | None:intergenic | 40.0% | |
| TTTGACCTGGAAATTCATGC+CGG | - | chr5.3:76019504-76019523 | None:intergenic | 40.0% | |
| ! | GTTTTACTTCAACAGGTACC+TGG | + | chr5.3:76017347-76017366 | MS.gene81435:intron | 40.0% |
| ! | TTTTCCTGAAACATGGAAGC+AGG | + | chr5.3:76019030-76019049 | MS.gene81435:CDS | 40.0% |
| ! | TTTTCCTGCTTCCATGTTTC+AGG | - | chr5.3:76019037-76019056 | None:intergenic | 40.0% |
| !! | AGGAAGTGTTTATCCCTACA+CGG | - | chr5.3:76020674-76020693 | None:intergenic | 40.0% |
| !! | TGGCAGTTGGTGACATATAT+AGG | + | chr5.3:76020179-76020198 | MS.gene81435:CDS | 40.0% |
| !!! | CCCTTGTTTTTCCTGAAACA+TGG | + | chr5.3:76019023-76019042 | MS.gene81435:CDS | 40.0% |
| !!! | TTTTTTCCAGGACGAAATCC+AGG | - | chr5.3:76017368-76017387 | None:intergenic | 40.0% |
| AAAAGTCACCTGTTGCACTG+TGG | - | chr5.3:76019404-76019423 | None:intergenic | 45.0% | |
| ACTTTCACACGCTGTAACAG+CGG | + | chr5.3:76017469-76017488 | MS.gene81435:CDS | 45.0% | |
| ATACGACGAGGAACGTGTAA+AGG | + | chr5.3:76020520-76020539 | MS.gene81435:CDS | 45.0% | |
| ATCAAACAGAACCTGGCAGT+TGG | + | chr5.3:76020166-76020185 | MS.gene81435:CDS | 45.0% | |
| ATGCGAGGACTGTTACGAAA+GGG | + | chr5.3:76016985-76017004 | MS.gene81435:CDS | 45.0% | |
| ATTCTCCGGCATGAATTTCC+AGG | + | chr5.3:76019496-76019515 | MS.gene81435:intron | 45.0% | |
| CGTTATAAAACGACTCGCAG+AGG | - | chr5.3:76018543-76018562 | None:intergenic | 45.0% | |
| GCAATAGAATCATCCAGCTC+TGG | - | chr5.3:76019358-76019377 | None:intergenic | 45.0% | |
| GCATGGAAGAGAATGTAGAG+TGG | - | chr5.3:76017194-76017213 | None:intergenic | 45.0% | |
| GGCTATCCGAAAGGATTACA+CGG | + | chr5.3:76020800-76020819 | MS.gene81435:intron | 45.0% | |
| TATGCGAGGACTGTTACGAA+AGG | + | chr5.3:76016984-76017003 | MS.gene81435:CDS | 45.0% | |
| TGGAAGCAGGAAAATCTCCA+AGG | + | chr5.3:76019043-76019062 | MS.gene81435:CDS | 45.0% | |
| TGTTACTGACAGAGGACTAC+AGG | + | chr5.3:76018422-76018441 | MS.gene81435:CDS | 45.0% | |
| ! | AAGGAGCTAAGGTGCTAGAA+TGG | + | chr5.3:76020987-76021006 | MS.gene81435:CDS | 45.0% |
| !! | GTCCCGGAAAGTATTCTTGT+TGG | + | chr5.3:76017389-76017408 | MS.gene81435:CDS | 45.0% |
| !! | AATTATAAAATACATATAAA+AGG | - | chr5.3:76018672-76018691 | None:intergenic | 5.0% |
| CCACATGCAATCTAACCTGC+AGG | - | chr5.3:76016949-76016968 | None:intergenic | 50.0% | |
| CCTGCAGGTTAGATTGCATG+TGG | + | chr5.3:76016946-76016965 | MS.gene81435:intron | 50.0% | |
| CGAGGAACGTGTAAAGGAAC+AGG | + | chr5.3:76020526-76020545 | MS.gene81435:CDS | 50.0% | |
| GCAGGTTAGATTGCATGTGG+AGG | + | chr5.3:76016949-76016968 | MS.gene81435:intron | 50.0% | |
| GTTGCACTGTGGTACATCCA+GGG | - | chr5.3:76019393-76019412 | None:intergenic | 50.0% | |
| TCGTCCTGGAAAAAAGGTCC+CGG | + | chr5.3:76017373-76017392 | MS.gene81435:CDS | 50.0% | |
| TGGATGTACCACAGTGCAAC+AGG | + | chr5.3:76019393-76019412 | MS.gene81435:CDS | 50.0% | |
| TGTTGCACTGTGGTACATCC+AGG | - | chr5.3:76019394-76019413 | None:intergenic | 50.0% | |
| !! | AGAAGGCGTTACAAGTCAGC+TGG | + | chr5.3:76018387-76018406 | MS.gene81435:CDS | 50.0% |
| !!! | CTTTCCGGGACCTTTTTTCC+AGG | - | chr5.3:76017380-76017399 | None:intergenic | 50.0% |
| CAGGTACCTGGATTTCGTCC+TGG | + | chr5.3:76017359-76017378 | MS.gene81435:intron | 55.0% | |
| CAGTCCTCGCATACCAGTGA+TGG | - | chr5.3:76016977-76016996 | None:intergenic | 55.0% | |
| GGTACCATCACTGGTATGCG+AGG | + | chr5.3:76016970-76016989 | MS.gene81435:CDS | 55.0% | |
| GGTTACTGGAAGGGCTTTGC+AGG | + | chr5.3:76017964-76017983 | MS.gene81435:intron | 55.0% | |
| !! | GCATGTGGAGGTACCATCAC+TGG | + | chr5.3:76016961-76016980 | MS.gene81435:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 76016837 | 76021048 | 76016837 | ID=MS.gene81435 |
| chr5.3 | mRNA | 76016837 | 76021048 | 76016837 | ID=MS.gene81435.t1;Parent=MS.gene81435 |
| chr5.3 | exon | 76016837 | 76016914 | 76016837 | ID=MS.gene81435.t1.exon1;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76016837 | 76016914 | 76016837 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76016953 | 76017036 | 76016953 | ID=MS.gene81435.t1.exon2;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76016953 | 76017036 | 76016953 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76017362 | 76017490 | 76017362 | ID=MS.gene81435.t1.exon3;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76017362 | 76017490 | 76017362 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76017965 | 76018053 | 76017965 | ID=MS.gene81435.t1.exon4;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76017965 | 76018053 | 76017965 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76018260 | 76018443 | 76018260 | ID=MS.gene81435.t1.exon5;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76018260 | 76018443 | 76018260 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76018735 | 76018822 | 76018735 | ID=MS.gene81435.t1.exon6;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76018735 | 76018822 | 76018735 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76018930 | 76019084 | 76018930 | ID=MS.gene81435.t1.exon7;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76018930 | 76019084 | 76018930 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76019322 | 76019414 | 76019322 | ID=MS.gene81435.t1.exon8;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76019322 | 76019414 | 76019322 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76019518 | 76019610 | 76019518 | ID=MS.gene81435.t1.exon9;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76019518 | 76019610 | 76019518 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76019852 | 76019932 | 76019852 | ID=MS.gene81435.t1.exon10;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76019852 | 76019932 | 76019852 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76020067 | 76020216 | 76020067 | ID=MS.gene81435.t1.exon11;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76020067 | 76020216 | 76020067 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76020452 | 76020547 | 76020452 | ID=MS.gene81435.t1.exon12;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76020452 | 76020547 | 76020452 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| chr5.3 | exon | 76020971 | 76021048 | 76020971 | ID=MS.gene81435.t1.exon13;Parent=MS.gene81435.t1 |
| chr5.3 | CDS | 76020971 | 76021048 | 76020971 | ID=cds.MS.gene81435.t1;Parent=MS.gene81435.t1 |
| Gene Sequence |
| Protein sequence |
