AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006566.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006566.01.T01 MTR_2g010820 80.536 560 61 5 1 558 1 514 0.0 804
MsG0280006566.01.T01 MTR_1g026790 50.168 594 192 14 1 558 1 526 1.34e-140 424
MsG0280006566.01.T01 MTR_1g026790 47.218 593 195 16 1 557 1 511 9.99e-120 369
MsG0280006566.01.T01 MTR_2g010815 96.988 166 5 0 561 726 1 166 5.57e-113 338
MsG0280006566.01.T01 MTR_2g010800 86.747 166 22 0 561 726 1 166 1.60e-100 306
MsG0280006566.01.T01 MTR_1g026810 41.892 444 168 12 168 564 78 478 1.30e-85 279
MsG0280006566.01.T01 MTR_1g026810 44.860 214 88 4 17 218 3 198 1.29e-33 135
MsG0280006566.01.T01 MTR_1g026810 41.686 439 168 11 168 561 78 473 1.71e-85 278
MsG0280006566.01.T01 MTR_1g026810 44.196 224 93 5 17 226 3 208 5.51e-34 136
MsG0280006566.01.T01 MTR_1g026810 41.935 403 160 10 204 561 4 377 1.66e-81 264
MsG0280006566.01.T01 MTR_1g026810 37.956 137 50 4 96 226 5 112 1.03e-14 77.0
MsG0280006566.01.T01 MTR_7g080040 65.060 166 58 0 561 726 1 166 2.31e-77 246
MsG0280006566.01.T01 MTR_1g026800 43.323 337 122 8 282 564 144 465 1.41e-66 228
MsG0280006566.01.T01 MTR_1g026800 43.750 176 63 3 10 181 70 213 3.49e-25 110
MsG0280006566.01.T01 MTR_1g026760 53.614 166 68 4 14 178 35 192 7.71e-41 148
MsG0280006566.01.T01 MTR_1g026760 51.220 82 35 2 313 393 115 192 1.97e-14 72.8
MsG0280006566.01.T01 MTR_1g026760 52.941 85 32 3 276 359 115 192 1.03e-12 67.8
MsG0280006566.01.T01 MTR_1g026760 52.381 84 33 3 204 286 115 192 2.85e-12 66.6
MsG0280006566.01.T01 MTR_1g026760 43.519 108 43 4 155 250 91 192 2.42e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006566.01.T01 AT5G56260 75.301 166 41 0 561 726 1 166 6.57e-84 263
MsG0280006566.01.T01 AT5G56260 75.301 166 41 0 561 726 1 166 6.57e-84 263
MsG0280006566.01.T01 AT5G56260 75.301 166 41 0 561 726 1 166 6.57e-84 263
MsG0280006566.01.T01 AT5G56260 75.301 166 41 0 561 726 33 198 1.11e-83 263
MsG0280006566.01.T01 AT5G56260 75.301 166 41 0 561 726 33 198 1.11e-83 263
MsG0280006566.01.T01 AT3G02770 65.060 166 58 0 561 726 1 166 1.04e-74 239
MsG0280006566.01.T01 AT5G16450 65.060 166 58 0 561 726 1 166 3.06e-74 238
MsG0280006566.01.T01 AT5G16450 65.060 166 58 0 561 726 1 166 3.06e-74 238
MsG0280006566.01.T01 AT1G21560 32.857 140 79 4 424 557 246 376 7.25e-11 65.5
MsG0280006566.01.T01 AT1G21560 32.857 140 79 4 424 557 246 376 7.25e-11 65.5
MsG0280006566.01.T01 AT1G21560 32.857 140 79 4 424 557 246 376 7.25e-11 65.5
MsG0280006566.01.T01 AT1G21560 32.857 140 79 4 424 557 246 376 7.25e-11 65.5
MsG0280006566.01.T01 AT1G21560 32.857 140 79 4 424 557 172 302 9.58e-11 64.3

Find 129 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTCAGATCTAATTATTT+TGG 0.118667 2:-3515201 MsG0280006566.01.T01:CDS
CTTATGATCATTCTCTATTT+AGG 0.174386 2:-3514928 MsG0280006566.01.T01:CDS
TTCTCATATGAGTGAGAATT+TGG 0.180904 2:-3516440 MsG0280006566.01.T01:CDS
TGCTCTTGTTGGAGGGAATT+TGG 0.199853 2:-3511307 MsG0280006566.01.T01:CDS
AGCAGATTATGCATCTTATT+TGG 0.207753 2:-3515525 MsG0280006566.01.T01:CDS
AAAGAGGTGTTTCCACAAAT+TGG 0.239654 2:+3515170 None:intergenic
TTCAGATTACGCATCCTATT+TGG 0.240900 2:-3515852 MsG0280006566.01.T01:CDS
TCTATTTAGGAGAACACTTA+TGG 0.240911 2:-3514915 MsG0280006566.01.T01:CDS
TGCAGATTACGCATCCTATT+TGG 0.262642 2:-3515744 MsG0280006566.01.T01:CDS
GCTATTTGCTTGTTGTCTTC+GGG 0.264368 2:+3514953 None:intergenic
GCACAGTCAGTTTGAATATC+AGG 0.264965 2:+3516145 None:intergenic
GCAGATGAAGATTGGCTAAT+AGG 0.265998 2:-3516241 MsG0280006566.01.T01:CDS
AGCTATTTGCTTGTTGTCTT+CGG 0.268334 2:+3514952 None:intergenic
ATGATTATAAGTAGCTAAAA+AGG 0.274046 2:+3515946 None:intergenic
TGGCCAGTCTCGGGCATTCT+CGG 0.281731 2:-3511442 MsG0280006566.01.T01:CDS
GCACAAAACATGGGGTGGTC+TGG 0.304278 2:-3511276 MsG0280006566.01.T01:CDS
CAACAATAGTCACAGAATTA+AGG 0.316140 2:+3515297 None:intergenic
AGGATCATGTGTAGGTAAAA+AGG 0.327223 2:+3516165 None:intergenic
ATTCTGACGATAAAAGAATA+AGG 0.331542 2:-3516408 MsG0280006566.01.T01:CDS
ATGATTATAAGTAGCCAAAA+AGG 0.333045 2:+3516054 None:intergenic
AGGATCATGTGTACACAAAA+AGG 0.336909 2:+3515622 None:intergenic
AGGATCATTTGTAGGCAAAA+AGG 0.340795 2:+3515403 None:intergenic
ATGATTATAAGCAGCCAAAT+AGG 0.345125 2:+3515838 None:intergenic
GCACAATAAGTTTCAATATC+AGG 0.347464 2:+3515383 None:intergenic
GGCCAGTCTCGGGCATTCTC+GGG 0.351904 2:-3511441 MsG0280006566.01.T01:CDS
AATTCTGTGACTATTGTTGA+TGG 0.353060 2:-3515293 MsG0280006566.01.T01:CDS
ATGATTATAAGCAGCCAAAT+AGG 0.354183 2:+3515730 None:intergenic
TCAATATCAGGATCATTTGT+AGG 0.354328 2:+3515395 None:intergenic
CAACAATGACATTGATGAAA+TGG 0.359842 2:-3516092 MsG0280006566.01.T01:CDS
GAAGGTCATCATACTCTTCT+TGG 0.372883 2:+3514870 None:intergenic
TGGTCTGGGATTGTTGTGAA+TGG 0.381293 2:-3511261 MsG0280006566.01.T01:CDS
AAAAGGAGAAGGAAGAGTTT+TGG 0.387441 2:-3511358 MsG0280006566.01.T01:CDS
AAAAGCTATTGCTGAGTTCA+AGG 0.387811 2:-3514006 MsG0280006566.01.T01:CDS
ACACAACCAGTTTCAATATC+AGG 0.391445 2:+3515602 None:intergenic
CACAAAACATGGGGTGGTCT+GGG 0.391877 2:-3511275 MsG0280006566.01.T01:CDS
GTTGCAGGAGTAGTGTAATA+TGG 0.397575 2:-3511556 MsG0280006566.01.T01:intron
CAACAAGGACAGTGATGAAA+TGG 0.401840 2:-3515984 MsG0280006566.01.T01:CDS
CAACAACGACAGTGATGAAA+TGG 0.402450 2:-3515549 MsG0280006566.01.T01:CDS
CGACAAGGACAGTGATGAAA+TGG 0.408380 2:-3515768 MsG0280006566.01.T01:CDS
TGATATTTGAATCACCACTA+TGG 0.409450 2:+3515897 None:intergenic
CCCGAGACTGGCCATACATC+TGG 0.415145 2:+3511451 None:intergenic
CATGATCCTGATATTGAAAC+TGG 0.417285 2:-3515608 MsG0280006566.01.T01:CDS
GCCCCGAGAATGCCCGAGAC+TGG 0.420007 2:+3511439 None:intergenic
TCAAGTTGGTGTTAGAGCTT+TGG 0.422544 2:-3511205 MsG0280006566.01.T01:CDS
CTCCACATTGGATGTGTTAG+TGG 0.423909 2:+3515241 None:intergenic
TCATACTCTTCTTGGTCATA+AGG 0.426914 2:+3514878 None:intergenic
AATCATAGTGGCGGTTCAAA+TGG 0.428989 2:-3516118 MsG0280006566.01.T01:CDS
GATGGAATGGATGCAGATTA+CGG 0.447564 2:-3515428 MsG0280006566.01.T01:CDS
AACGCAACACATTTAACAAA+TGG 0.449158 2:-3511501 MsG0280006566.01.T01:CDS
TCCAGATGTATGGCCAGTCT+CGG 0.458278 2:-3511452 MsG0280006566.01.T01:CDS
GGTGCAGTTGGCACAAAACA+TGG 0.464361 2:-3511286 MsG0280006566.01.T01:CDS
ATGAAGATGCAGATGAAGAT+TGG 0.465550 2:-3516249 MsG0280006566.01.T01:CDS
AGGTGACAATGGTGGTGAAA+TGG 0.468503 2:-3516203 MsG0280006566.01.T01:CDS
CATCCAGTGTTCCAGATGTA+TGG 0.472302 2:-3511462 MsG0280006566.01.T01:CDS
TCACTCATATGAGAATCAAC+AGG 0.473883 2:+3516448 None:intergenic
GAAAATGGGGCGTGCAATCA+AGG 0.475034 2:-3516476 None:intergenic
TAAGGTTAGAAAGGCGATGG+AGG 0.476089 2:-3516390 MsG0280006566.01.T01:CDS
AATCACAGTGAAGGTTCAAA+TGG 0.479372 2:-3515575 MsG0280006566.01.T01:CDS
CAGTCTAGTACTATTTCAAA+TGG 0.479945 2:+3511044 None:intergenic
TCAAATGGACAACTCAAACT+TGG 0.482072 2:+3511059 None:intergenic
TGGAGGGAATTTGGTGCAGT+TGG 0.484334 2:-3511298 MsG0280006566.01.T01:CDS
AGAGAACTTCTTGAAACAAA+AGG 0.491488 2:-3511375 MsG0280006566.01.T01:CDS
GAGATTAATTTGTGTCAAGT+TGG 0.491931 2:-3511219 MsG0280006566.01.T01:CDS
TAGAAAGGCGATGGAGGAGA+CGG 0.498661 2:-3516384 MsG0280006566.01.T01:CDS
GATATCAACAAGGACAATGA+TGG 0.500003 2:-3515446 MsG0280006566.01.T01:CDS
CATGTTGCTGTTTATGTTGG+AGG 0.502059 2:-3511138 MsG0280006566.01.T01:CDS
AAACATGTTGCTGTTTATGT+TGG 0.508506 2:-3511141 MsG0280006566.01.T01:CDS
TGAGTTCAAGGAACAGCATA+GGG 0.510350 2:-3513994 MsG0280006566.01.T01:CDS
TGGCCATACATCTGGAACAC+TGG 0.512769 2:+3511459 None:intergenic
ATAAAAGAATAAGGTTAGAA+AGG 0.515003 2:-3516399 MsG0280006566.01.T01:CDS
AGAAAGGCGATGGAGGAGAC+GGG 0.519526 2:-3516383 MsG0280006566.01.T01:CDS
GAATAAGGTTAGAAAGGCGA+TGG 0.530643 2:-3516393 MsG0280006566.01.T01:CDS
CGGTTCATTAGTTTCTGATG+TGG 0.532761 2:-3515345 MsG0280006566.01.T01:CDS
CCAGATGTATGGCCAGTCTC+GGG 0.532810 2:-3511451 MsG0280006566.01.T01:CDS
GACTATTGTTGATGGCGATA+AGG 0.539127 2:-3515285 MsG0280006566.01.T01:CDS
GCTTAGATACTTTGAGCAGA+AGG 0.542069 2:+3514852 None:intergenic
CAACAAGGACAATGATGGAA+TGG 0.544054 2:-3515441 MsG0280006566.01.T01:CDS
GACTGTGCTAATAATCATAG+TGG 0.544833 2:-3516130 MsG0280006566.01.T01:CDS
GTGTCACATATCTCTGCTGT+TGG 0.545822 2:+3511525 None:intergenic
CAACAAGGACAGTGATGAAG+TGG 0.548009 2:-3515876 MsG0280006566.01.T01:CDS
CTGAGTTCAAGGAACAGCAT+AGG 0.551099 2:-3513995 MsG0280006566.01.T01:CDS
ACGCCATCTAGAAACACGGC+AGG 0.552819 2:-3514816 MsG0280006566.01.T01:CDS
CGACAAGGACAGTGATGAAG+TGG 0.553638 2:-3515660 MsG0280006566.01.T01:CDS
GCCAGTCTCGGGCATTCTCG+GGG 0.553955 2:-3511440 MsG0280006566.01.T01:CDS
CTATTTGCTTGTTGTCTTCG+GGG 0.556947 2:+3514954 None:intergenic
AAGACAACTGCGAAGACTTG+TGG 0.557160 2:-3516313 MsG0280006566.01.T01:CDS
AGCATGAGGTGTGCTCTTGT+TGG 0.557997 2:-3511318 MsG0280006566.01.T01:CDS
TGTCTTTGAAGAAACGAAAG+AGG 0.566107 2:+3515154 None:intergenic
ATGAGGTGTGCTCTTGTTGG+AGG 0.569564 2:-3511315 MsG0280006566.01.T01:CDS
AATAATTAGATCTGAATCAG+AGG 0.576055 2:+3515205 None:intergenic
TGAATATCAGGATCATGTGT+AGG 0.581968 2:+3516157 None:intergenic
ATTACTATCATCCTCCACAT+TGG 0.582157 2:+3515229 None:intergenic
CTTCTTGAAACAAAAGGAGA+AGG 0.585218 2:-3511369 MsG0280006566.01.T01:CDS
GCCATCTAGAAACACGGCAG+GGG 0.585968 2:-3514814 MsG0280006566.01.T01:CDS
TGGCTCTATGCAGATAATGA+TGG 0.590987 2:-3511093 MsG0280006566.01.T01:CDS
TGTGTTAGTAATCACAGTGA+AGG 0.592791 2:-3515584 MsG0280006566.01.T01:CDS
GTTAAATTATATCACTGTGA+TGG 0.594013 2:-3514788 MsG0280006566.01.T01:CDS
CACTTATGGAATGTCTTGAA+AGG 0.610730 2:-3514901 MsG0280006566.01.T01:CDS
CGCCATCTAGAAACACGGCA+GGG 0.612231 2:-3514815 MsG0280006566.01.T01:CDS
ATTTAACAAATGGTGACTTG+AGG 0.616446 2:-3511491 MsG0280006566.01.T01:CDS
AGTGTTTGAAGACAATGTGT+TGG 0.617013 2:-3511400 MsG0280006566.01.T01:CDS
CCATCTAGAAACACGGCAGG+GGG 0.619089 2:-3514813 MsG0280006566.01.T01:CDS
GTGCAGTTGGCACAAAACAT+GGG 0.623381 2:-3511285 MsG0280006566.01.T01:CDS
GAATGGTTGTATTAGAGATG+TGG 0.623790 2:-3511244 MsG0280006566.01.T01:CDS
CACTCATATGAGAATCAACA+GGG 0.630150 2:+3516449 None:intergenic
CACTAACACATCCAATGTGG+AGG 0.638603 2:-3515240 MsG0280006566.01.T01:CDS
TGTGCTAGTAATCATAGCAG+CGG 0.645567 2:-3515365 MsG0280006566.01.T01:CDS
TGAGGTGTGCTCTTGTTGGA+GGG 0.651891 2:-3511314 MsG0280006566.01.T01:CDS
TCATATCTTGATATGCACCC+TGG 0.658335 2:-3514755 MsG0280006566.01.T01:intron
AAGGCGATGGAGGAGACGGG+AGG 0.670199 2:-3516380 MsG0280006566.01.T01:CDS
AGTTGGCACAAAACATGGGG+TGG 0.672135 2:-3511281 MsG0280006566.01.T01:CDS
TGCAGTTGGCACAAAACATG+GGG 0.672279 2:-3511284 MsG0280006566.01.T01:CDS
TTGATGGAGGAGGAAGCATG+AGG 0.673507 2:-3511332 MsG0280006566.01.T01:CDS
TGTGCTAATAATCATAGTGG+CGG 0.683136 2:-3516127 MsG0280006566.01.T01:CDS
ATAGGTTTGAGTGCATACAC+AGG 0.683872 2:-3516223 MsG0280006566.01.T01:CDS
AAGAACGCCATCTAGAAACA+CGG 0.684532 2:-3514820 MsG0280006566.01.T01:CDS
AGTGCATACACAGGTGACAA+TGG 0.688393 2:-3516214 MsG0280006566.01.T01:CDS
TGCCACTAACACATCCAATG+TGG 0.690065 2:-3515243 MsG0280006566.01.T01:CDS
TGTGCTAGTAATCATAGTGG+TGG 0.696966 2:-3515473 MsG0280006566.01.T01:CDS
GATTGTGCTAGTAATCATAG+TGG 0.698345 2:-3515476 MsG0280006566.01.T01:CDS
GATTGTGCTAGTAATCATAG+TGG 0.698345 2:-3515695 MsG0280006566.01.T01:CDS
GATTGTGCTAGTAATCATAG+TGG 0.698345 2:-3515803 MsG0280006566.01.T01:CDS
GATTGTGCTAGTAATCATAG+TGG 0.698345 2:-3516019 MsG0280006566.01.T01:CDS
TGGTGATTCAAATATCGACA+AGG 0.703913 2:-3515675 MsG0280006566.01.T01:CDS
TGGTGATTCAAATATCGACA+AGG 0.703913 2:-3515783 MsG0280006566.01.T01:CDS
TGGTGATTCAAATATCAACA+AGG 0.708399 2:-3515891 MsG0280006566.01.T01:CDS
TGGTGATTCAAATATCAACA+AGG 0.708399 2:-3515999 MsG0280006566.01.T01:CDS
TGGTGGTTCAGATATCAACA+AGG 0.741194 2:-3515456 MsG0280006566.01.T01:CDS
GCATACACAGGTGACAATGG+TGG 0.788936 2:-3516211 MsG0280006566.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGATATGATAATCA+AGG + Chr2:3514041-3514060 None:intergenic 15.0%
!! CCATAAAAAAAATAAATGAA+TGG - Chr2:3515731-3515750 MsG0280006566.01.T01:CDS 15.0%
!! TTAAATTATTATGCAAACTA+AGG + Chr2:3515538-3515557 None:intergenic 15.0%
!! TTTACTATAACTATAAGTAA+AGG - Chr2:3515938-3515957 MsG0280006566.01.T01:CDS 15.0%
!!! AACTTTTAAAATCAACTAAA+AGG - Chr2:3514683-3514702 MsG0280006566.01.T01:intron 15.0%
!!! CCATTCATTTATTTTTTTTA+TGG + Chr2:3515734-3515753 None:intergenic 15.0%
!!! TAGTTGATTTTAAAAGTTTT+GGG + Chr2:3514681-3514700 None:intergenic 15.0%
!!! TATATAATTTAACGAAGTTT+TGG + Chr2:3512970-3512989 None:intergenic 15.0%
!!! TCTTCTTTTGTTTATAAAAA+TGG - Chr2:3512839-3512858 MsG0280006566.01.T01:intron 15.0%
!!! TTAGTTGATTTTAAAAGTTT+TGG + Chr2:3514682-3514701 None:intergenic 15.0%
!! AACTATTACAATCAACTAAA+AGG + Chr2:3514818-3514837 None:intergenic 20.0%
!! AAGCAAATTACATTTATTTG+AGG + Chr2:3513171-3513190 None:intergenic 20.0%
!! ACAGAATATGAAACTATATT+TGG - Chr2:3514152-3514171 MsG0280006566.01.T01:intron 20.0%
!! AGTTGAGGAATTAAATTAAT+GGG + Chr2:3515452-3515471 None:intergenic 20.0%
!! ATAAAAGAATAAGGTTAGAA+AGG - Chr2:3511132-3511151 MsG0280006566.01.T01:CDS 20.0%
!! ATGATTATAAGTAGCTAAAA+AGG + Chr2:3511588-3511607 None:intergenic 20.0%
!! GTTGTTTAAAAAAATATGCA+TGG + Chr2:3514232-3514251 None:intergenic 20.0%
!! TCATAAATAAAAGCAAACAT+AGG - Chr2:3515413-3515432 MsG0280006566.01.T01:CDS 20.0%
!! TGTGATATAATGATAGTTTA+AGG - Chr2:3514851-3514870 MsG0280006566.01.T01:CDS 20.0%
!! TTAGTTGATTGTAATAGTTT+AGG - Chr2:3514819-3514838 MsG0280006566.01.T01:CDS 20.0%
!!! AAATGGAATCTTTTATTTCT+AGG - Chr2:3513877-3513896 MsG0280006566.01.T01:intron 20.0%
!!! AATCTTTTATTTCTAGGATT+TGG - Chr2:3513883-3513902 MsG0280006566.01.T01:intron 20.0%
!!! AGTCATTTTGATAAATTCTA+TGG + Chr2:3515700-3515719 None:intergenic 20.0%
!!! ATATATTATTTTGTCACAAG+TGG + Chr2:3515308-3515327 None:intergenic 20.0%
!!! CAAATGTTTCATTTTTGTTA+TGG - Chr2:3514583-3514602 MsG0280006566.01.T01:intron 20.0%
!!! CTTTTATTTATGAAAATGTG+AGG + Chr2:3515406-3515425 None:intergenic 20.0%
!!! GTTCTCAAAATTATTTTTAG+AGG + Chr2:3514191-3514210 None:intergenic 20.0%
!!! TGATTCAGATCTAATTATTT+TGG - Chr2:3512330-3512349 MsG0280006566.01.T01:intron 20.0%
!!! TGTGTAAAATTTTAATGTGA+GGG - Chr2:3513093-3513112 MsG0280006566.01.T01:intron 20.0%
!!! TTGTGTAAAATTTTAATGTG+AGG - Chr2:3513092-3513111 MsG0280006566.01.T01:intron 20.0%
! AAAATTACTCATCCCTATAT+CGG + Chr2:3514920-3514939 None:intergenic 25.0%
! AAAGCATAAGATTGAAATTC+AGG + Chr2:3515580-3515599 None:intergenic 25.0%
! AATAATTAGATCTGAATCAG+AGG + Chr2:3512329-3512348 None:intergenic 25.0%
! ACCTTTACAATAACAAGTAT+TGG - Chr2:3515841-3515860 MsG0280006566.01.T01:CDS 25.0%
! AGATATGATAATCAAGGAAT+TGG + Chr2:3514035-3514054 None:intergenic 25.0%
! AGGAATTAAATTAATGGGAT+TGG + Chr2:3515447-3515466 None:intergenic 25.0%
! ATCACATTTCTCATAGTTTA+AGG - Chr2:3514791-3514810 MsG0280006566.01.T01:CDS 25.0%
! ATGATTATAAGTAGCCAAAA+AGG + Chr2:3511480-3511499 None:intergenic 25.0%
! ATTCTGACGATAAAAGAATA+AGG - Chr2:3511123-3511142 MsG0280006566.01.T01:CDS 25.0%
! ATTTCCTGTATGTATAATTG+TGG - Chr2:3513628-3513647 MsG0280006566.01.T01:intron 25.0%
! CATAATAATTTAAGCTAGCT+TGG - Chr2:3515545-3515564 MsG0280006566.01.T01:CDS 25.0%
! CCACTTAAATCCAATAAAAA+CGG - Chr2:3516357-3516376 MsG0280006566.01.T01:CDS 25.0%
! CTTATGATCATTCTCTATTT+AGG - Chr2:3512603-3512622 MsG0280006566.01.T01:intron 25.0%
! GAACTAATATATAACAGTAG+AGG - Chr2:3513217-3513236 MsG0280006566.01.T01:intron 25.0%
! GAAGAATACTTGAGAAAATA+TGG + Chr2:3512807-3512826 None:intergenic 25.0%
! GAGTTGAGGAATTAAATTAA+TGG + Chr2:3515453-3515472 None:intergenic 25.0%
! GTGATTCAAAGTAGAATAAA+AGG - Chr2:3514524-3514543 MsG0280006566.01.T01:intron 25.0%
! GTTAAATTATATCACTGTGA+TGG - Chr2:3512743-3512762 MsG0280006566.01.T01:intron 25.0%
! TAGAAATATACACCGATATA+GGG - Chr2:3514905-3514924 MsG0280006566.01.T01:CDS 25.0%
! TATTGCGGAAAATGTAAAAA+TGG - Chr2:3513860-3513879 MsG0280006566.01.T01:intron 25.0%
! TATTTATGAAAATGTGAGGA+GGG + Chr2:3515402-3515421 None:intergenic 25.0%
! TGAATCTTGATTGCATATTT+AGG + Chr2:3512881-3512900 None:intergenic 25.0%
! TGATGTATTTCTCAAAGTTT+GGG + Chr2:3514710-3514729 None:intergenic 25.0%
! TTAAAAAAATATGCATGGAC+CGG + Chr2:3514227-3514246 None:intergenic 25.0%
! TTAGAAATATACACCGATAT+AGG - Chr2:3514904-3514923 MsG0280006566.01.T01:CDS 25.0%
! TTATTTATGAAAATGTGAGG+AGG + Chr2:3515403-3515422 None:intergenic 25.0%
! TTGATGTATTTCTCAAAGTT+TGG + Chr2:3514711-3514730 None:intergenic 25.0%
!! AATGGTTTTTGAATCTATAC+AGG - Chr2:3513910-3513929 MsG0280006566.01.T01:intron 25.0%
!! ATATTTTCTCCATATTGTGA+TGG - Chr2:3513065-3513084 MsG0280006566.01.T01:intron 25.0%
!! ATTCTTTTATCGTCAGAATA+AGG + Chr2:3511122-3511141 None:intergenic 25.0%
!! ATTGTCTTCAAACACTTTTA+CGG + Chr2:3516127-3516146 None:intergenic 25.0%
!! CTTTGAGAAATACATCAATT+TGG - Chr2:3514713-3514732 MsG0280006566.01.T01:intron 25.0%
!! TTAGGGACTAAATTGAATTT+TGG + Chr2:3514633-3514652 None:intergenic 25.0%
!! TTGGTACTTTATACTTCTTT+TGG - Chr2:3513403-3513422 MsG0280006566.01.T01:intron 25.0%
!! TTTCATATTCTGTTTTCACA+AGG + Chr2:3514145-3514164 None:intergenic 25.0%
!! TTTTGATAAATTCTATGGCA+AGG + Chr2:3515695-3515714 None:intergenic 25.0%
!!! GTGTAAAATTTTAATGTGAG+GGG - Chr2:3513094-3513113 MsG0280006566.01.T01:intron 25.0%
!!! TAAAAGTTTTGGGACTAAAT+TGG + Chr2:3514671-3514690 None:intergenic 25.0%
!!! TAATTTAACGAAGTTTTGGT+TGG + Chr2:3512966-3512985 None:intergenic 25.0%
!!! TCCAATACTTGTTATTGTAA+AGG + Chr2:3515845-3515864 None:intergenic 25.0%
!!! TGTAAAATTTTAATGTGAGG+GGG - Chr2:3513095-3513114 MsG0280006566.01.T01:intron 25.0%
!!! TTGTGATTGTTCAAGTTTTT+TGG - Chr2:3513384-3513403 MsG0280006566.01.T01:intron 25.0%
AAAAGCAAACATAGGCTAAA+GGG - Chr2:3515421-3515440 MsG0280006566.01.T01:CDS 30.0%
AAACATGTTTGGAGATATTG+CGG - Chr2:3513845-3513864 MsG0280006566.01.T01:intron 30.0%
AAATCCAATAAAAACGGTAC+TGG - Chr2:3516363-3516382 MsG0280006566.01.T01:CDS 30.0%
AACGCAACACATTTAACAAA+TGG - Chr2:3516030-3516049 MsG0280006566.01.T01:CDS 30.0%
AACTCAACCTAAATTATGTG+TGG + Chr2:3515280-3515299 None:intergenic 30.0%
AACTCCACAATTATACATAC+AGG + Chr2:3513635-3513654 None:intergenic 30.0%
AATATACCAGTAAGAGTTAG+AGG - Chr2:3514071-3514090 MsG0280006566.01.T01:intron 30.0%
AATTCTGTGACTATTGTTGA+TGG - Chr2:3512238-3512257 MsG0280006566.01.T01:intron 30.0%
ACTAACTTCTTCATGTAAAC+AGG - Chr2:3515625-3515644 MsG0280006566.01.T01:CDS 30.0%
AGAGAACTTCTTGAAACAAA+AGG - Chr2:3516156-3516175 MsG0280006566.01.T01:CDS 30.0%
AGCAGATTATGCATCTTATT+TGG - Chr2:3512006-3512025 MsG0280006566.01.T01:intron 30.0%
AGTGACACATGAAATGAATA+TGG + Chr2:3515359-3515378 None:intergenic 30.0%
ATAGTTACAACGAATCAACT+AGG + Chr2:3515804-3515823 None:intergenic 30.0%
ATATGATTTAAGGGAAGAGA+AGG - Chr2:3512989-3513008 MsG0280006566.01.T01:intron 30.0%
ATGATTATAAGCAGCCAAAT+AGG + Chr2:3511696-3511715 None:intergenic 30.0%
ATTTAACAAATGGTGACTTG+AGG - Chr2:3516040-3516059 MsG0280006566.01.T01:CDS 30.0%
ATTTATGAAAATGTGAGGAG+GGG + Chr2:3515401-3515420 None:intergenic 30.0%
CAACAATAGTCACAGAATTA+AGG + Chr2:3512237-3512256 None:intergenic 30.0%
CAACAATGACATTGATGAAA+TGG - Chr2:3511439-3511458 MsG0280006566.01.T01:CDS 30.0%
GAGCTTAACAATTAGAGTAA+AGG - Chr2:3514108-3514127 MsG0280006566.01.T01:intron 30.0%
GATGTATTTCTCAAAGTTTG+GGG + Chr2:3514709-3514728 None:intergenic 30.0%
GATTTCTAATCATCAGTATG+TGG - Chr2:3513317-3513336 MsG0280006566.01.T01:intron 30.0%
GCACAATAAGTTTCAATATC+AGG + Chr2:3512151-3512170 None:intergenic 30.0%
GGTGAGATAATGAAAGTTTA+GGG + Chr2:3514650-3514669 None:intergenic 30.0%
GTAAAGCAGTAATTAATGAG+TGG - Chr2:3515877-3515896 MsG0280006566.01.T01:CDS 30.0%
GTGACACATGAAATGAATAT+GGG + Chr2:3515358-3515377 None:intergenic 30.0%
TAAAAAAATATGCATGGACC+GGG + Chr2:3514226-3514245 None:intergenic 30.0%
TAAAAGCAAACATAGGCTAA+AGG - Chr2:3515420-3515439 MsG0280006566.01.T01:CDS 30.0%
TCAATATCAGGATCATTTGT+AGG + Chr2:3512139-3512158 None:intergenic 30.0%
TCGTTGTAACTATAGGTAAA+AGG - Chr2:3515811-3515830 MsG0280006566.01.T01:CDS 30.0%
TCTATGCTCAATCTAATTTC+TGG - Chr2:3513462-3513481 MsG0280006566.01.T01:intron 30.0%
TCTATTTAGGAGAACACTTA+TGG - Chr2:3512616-3512635 MsG0280006566.01.T01:intron 30.0%
TGATATTTGAATCACCACTA+TGG + Chr2:3511529-3511548 None:intergenic 30.0%
TGGAGAAAATATATGTCAAC+AGG + Chr2:3513057-3513076 None:intergenic 30.0%
TGGTGAGATAATGAAAGTTT+AGG + Chr2:3514651-3514670 None:intergenic 30.0%
TGGTGATTCAAATATCAACA+AGG - Chr2:3511532-3511551 MsG0280006566.01.T01:CDS 30.0%
TTATGAGCCACACATAATTT+AGG - Chr2:3515270-3515289 MsG0280006566.01.T01:CDS 30.0%
TTATGCTTACCAAAATGAAG+AGG + Chr2:3515498-3515517 None:intergenic 30.0%
TTCAACTTCTATTCTCACTA+AGG - Chr2:3513429-3513448 MsG0280006566.01.T01:intron 30.0%
TTCTCATATGAGTGAGAATT+TGG - Chr2:3511091-3511110 MsG0280006566.01.T01:CDS 30.0%
! AGTATTTGTTGAACTTGAAG+TGG - Chr2:3514276-3514295 MsG0280006566.01.T01:intron 30.0%
! ATCATGATGCCTTTTAATCT+TGG - Chr2:3513269-3513288 MsG0280006566.01.T01:intron 30.0%
! ATGTCAACAGGAATAGTTTT+AGG + Chr2:3513045-3513064 None:intergenic 30.0%
! CTGAATAGCAAGCATTTTTA+AGG + Chr2:3512473-3512492 None:intergenic 30.0%
! CTTTGATTTCTCTGTAATCA+AGG - Chr2:3513243-3513262 MsG0280006566.01.T01:intron 30.0%
! TCATGATGCCTTTTAATCTT+GGG - Chr2:3513270-3513289 MsG0280006566.01.T01:intron 30.0%
! TTACTCTTGACACATTGTTT+TGG + Chr2:3513141-3513160 None:intergenic 30.0%
! TTGGATTCTTTTCCAATTTG+TGG - Chr2:3512349-3512368 MsG0280006566.01.T01:intron 30.0%
!! AAACATGTTGCTGTTTATGT+TGG - Chr2:3516390-3516409 MsG0280006566.01.T01:CDS 30.0%
!! AGTTGATTCGTTGTAACTAT+AGG - Chr2:3515804-3515823 MsG0280006566.01.T01:CDS 30.0%
!! CCGTTTTTATTGGATTTAAG+TGG + Chr2:3516360-3516379 None:intergenic 30.0%
!! GAGATTAATTTGTGTCAAGT+TGG - Chr2:3516312-3516331 MsG0280006566.01.T01:CDS 30.0%
!! TGTCAACAGGAATAGTTTTA+GGG + Chr2:3513044-3513063 None:intergenic 30.0%
!!! GCTATCTGTTTTTAGTGTTT+TGG - Chr2:3512542-3512561 MsG0280006566.01.T01:intron 30.0%
AAAACTCTCACTTGATGTGT+TGG - Chr2:3512935-3512954 MsG0280006566.01.T01:intron 35.0%
AAAAGCTATTGCTGAGTTCA+AGG - Chr2:3513525-3513544 MsG0280006566.01.T01:intron 35.0%
AAAATGAAGAGGAGAGATGA+AGG + Chr2:3515487-3515506 None:intergenic 35.0%
AAACTCTCACTTGATGTGTT+GGG - Chr2:3512936-3512955 MsG0280006566.01.T01:intron 35.0%
AAGAAGTGGAGTGATAAAGA+TGG + Chr2:3514317-3514336 None:intergenic 35.0%
AATCACAGTGAAGGTTCAAA+TGG - Chr2:3511956-3511975 MsG0280006566.01.T01:intron 35.0%
AATTGAATTATCTGACCGAC+TGG - Chr2:3515181-3515200 MsG0280006566.01.T01:CDS 35.0%
ACACAACCAGTTTCAATATC+AGG + Chr2:3511932-3511951 None:intergenic 35.0%
AGAATGAGCCCAAGATTAAA+AGG + Chr2:3513281-3513300 None:intergenic 35.0%
AGCAACAAGTCAACTAACAA+TGG + Chr2:3515152-3515171 None:intergenic 35.0%
AGGATCATGTGTACACAAAA+AGG + Chr2:3511912-3511931 None:intergenic 35.0%
AGGATCATGTGTAGGTAAAA+AGG + Chr2:3511369-3511388 None:intergenic 35.0%
AGGATCATTTGTAGGCAAAA+AGG + Chr2:3512131-3512150 None:intergenic 35.0%
AGTCGGTCAGATAATTCAAT+TGG + Chr2:3515182-3515201 None:intergenic 35.0%
AGTGTTTGAAGACAATGTGT+TGG - Chr2:3516131-3516150 MsG0280006566.01.T01:CDS 35.0%
ATATCGTGGCACATATATCA+AGG - Chr2:3515204-3515223 MsG0280006566.01.T01:CDS 35.0%
ATGAAGATGCAGATGAAGAT+TGG - Chr2:3511282-3511301 MsG0280006566.01.T01:CDS 35.0%
ATTACTATCATCCTCCACAT+TGG + Chr2:3512305-3512324 None:intergenic 35.0%
CACTCATATGAGAATCAACA+GGG + Chr2:3511085-3511104 None:intergenic 35.0%
CACTTATGGAATGTCTTGAA+AGG - Chr2:3512630-3512649 MsG0280006566.01.T01:intron 35.0%
CAGTAAGAGTTAGAGGAAAA+TGG - Chr2:3514078-3514097 MsG0280006566.01.T01:intron 35.0%
CATGATCCTGATATTGAAAC+TGG - Chr2:3511923-3511942 MsG0280006566.01.T01:intron 35.0%
CTCTCTAGTTAAAATTCCAC+AGG + Chr2:3515658-3515677 None:intergenic 35.0%
CTTCTTGAAACAAAAGGAGA+AGG - Chr2:3516162-3516181 MsG0280006566.01.T01:CDS 35.0%
GAATGGTTGTATTAGAGATG+TGG - Chr2:3516287-3516306 MsG0280006566.01.T01:CDS 35.0%
GACTGTGCTAATAATCATAG+TGG - Chr2:3511401-3511420 MsG0280006566.01.T01:CDS 35.0%
GATAGCATAAAGACGTGTTA+TGG + Chr2:3512528-3512547 None:intergenic 35.0%
GATATCAACAAGGACAATGA+TGG - Chr2:3512085-3512104 MsG0280006566.01.T01:intron 35.0%
GATGTCTTTGATTCCAACAT+GGG - Chr2:3513687-3513706 MsG0280006566.01.T01:intron 35.0%
GATTGTGCTAGTAATCATAG+TGG - Chr2:3511512-3511531 MsG0280006566.01.T01:CDS 35.0%
GCAACAAGTCAACTAACAAT+GGG + Chr2:3515151-3515170 None:intergenic 35.0%
TATACTCTCGTCCATCAATT+TGG + Chr2:3514763-3514782 None:intergenic 35.0%
TATCGTGGCACATATATCAA+GGG - Chr2:3515205-3515224 MsG0280006566.01.T01:CDS 35.0%
TCAAATGGACAACTCAAACT+TGG + Chr2:3516475-3516494 None:intergenic 35.0%
TCACTCATATGAGAATCAAC+AGG + Chr2:3511086-3511105 None:intergenic 35.0%
TCATACTCTTCTTGGTCATA+AGG + Chr2:3512656-3512675 None:intergenic 35.0%
TCTCAAGTATTCTTCTGACT+TGG - Chr2:3512812-3512831 MsG0280006566.01.T01:intron 35.0%
TGAATATCAGGATCATGTGT+AGG + Chr2:3511377-3511396 None:intergenic 35.0%
TGATCTAAGGACCAAATTGA+TGG - Chr2:3514749-3514768 MsG0280006566.01.T01:intron 35.0%
TGATGTCTTTGATTCCAACA+TGG - Chr2:3513686-3513705 MsG0280006566.01.T01:intron 35.0%
TGGTGATTCAAATATCGACA+AGG - Chr2:3511748-3511767 MsG0280006566.01.T01:intron 35.0%
TGTGCTAATAATCATAGTGG+CGG - Chr2:3511404-3511423 MsG0280006566.01.T01:CDS 35.0%
TGTGTTAGTAATCACAGTGA+AGG - Chr2:3511947-3511966 MsG0280006566.01.T01:intron 35.0%
TTCAGATTACGCATCCTATT+TGG - Chr2:3511679-3511698 MsG0280006566.01.T01:intron 35.0%
TTTATGAAAATGTGAGGAGG+GGG + Chr2:3515400-3515419 None:intergenic 35.0%
! AAAAGGAGAAGGAAGAGTTT+TGG - Chr2:3516173-3516192 MsG0280006566.01.T01:CDS 35.0%
! AACACTTTTACGGTAACAAC+AGG + Chr2:3516117-3516136 None:intergenic 35.0%
! AGTAAAGGTTCTTTTGCATG+TGG - Chr2:3515953-3515972 MsG0280006566.01.T01:CDS 35.0%
! CATTTTCCTCTAACTCTTAC+TGG + Chr2:3514080-3514099 None:intergenic 35.0%
! GATTTTGCTTGTAACCATAG+TGG - Chr2:3511620-3511639 MsG0280006566.01.T01:intron 35.0%
! GGAGTGATAAAGATGGTTTT+CGG + Chr2:3514310-3514329 None:intergenic 35.0%
! GGGACTAAATTGAATTTTGG+TGG + Chr2:3514630-3514649 None:intergenic 35.0%
! GTTTTGTAACACTAGCTGTT+AGG + Chr2:3512920-3512939 None:intergenic 35.0%
! TGGACAGAAAAAAGTACATC+AGG + Chr2:3513776-3513795 None:intergenic 35.0%
! TGTCTTTGAAGAAACGAAAG+AGG + Chr2:3512380-3512399 None:intergenic 35.0%
! TTCATCTCTCCTCTTCATTT+TGG - Chr2:3515486-3515505 MsG0280006566.01.T01:CDS 35.0%
!! AAAGAGGTGTTTCCACAAAT+TGG + Chr2:3512364-3512383 None:intergenic 35.0%
!! AGCTATTTGCTTGTTGTCTT+CGG + Chr2:3512582-3512601 None:intergenic 35.0%
!! CTTTTATTCGTGATGGAGAA+TGG - Chr2:3516418-3516437 MsG0280006566.01.T01:CDS 35.0%
!! GAGATATACCATTGGTTTCA+TGG + Chr2:3514356-3514375 None:intergenic 35.0%
!! TTCACCAGTACCGTTTTTAT+TGG + Chr2:3516370-3516389 None:intergenic 35.0%
!! TTTCTAGGATTTGGAAGCAA+TGG - Chr2:3513892-3513911 MsG0280006566.01.T01:intron 35.0%
!!! AGAGTTTTGGTTATTGATGG+AGG - Chr2:3516186-3516205 MsG0280006566.01.T01:CDS 35.0%
!!! GAGAACAACTAGTTTTATCC+CGG - Chr2:3514205-3514224 MsG0280006566.01.T01:intron 35.0%
!!! GGAAGAGTTTTGGTTATTGA+TGG - Chr2:3516183-3516202 MsG0280006566.01.T01:CDS 35.0%
AAGAACGCCATCTAGAAACA+CGG - Chr2:3512711-3512730 MsG0280006566.01.T01:intron 40.0%
AATCATAGTGGCGGTTCAAA+TGG - Chr2:3511413-3511432 MsG0280006566.01.T01:CDS 40.0%
ACTCACATATTCACCCATGT+TGG + Chr2:3513703-3513722 None:intergenic 40.0%
AGGCTCACTTTCTGCAAAAA+TGG + Chr2:3513796-3513815 None:intergenic 40.0%
ATAGGTTTGAGTGCATACAC+AGG - Chr2:3511308-3511327 MsG0280006566.01.T01:CDS 40.0%
CAACAACGACAGTGATGAAA+TGG - Chr2:3511982-3512001 MsG0280006566.01.T01:intron 40.0%
CAACAAGGACAGTGATGAAA+TGG - Chr2:3511547-3511566 MsG0280006566.01.T01:intron 40.0%
CACAAACAGCCATCACAATA+TGG + Chr2:3513077-3513096 None:intergenic 40.0%
CCTAGGTTCCATTGTAAGAA+CGG + Chr2:3514381-3514400 None:intergenic 40.0%
CTAGGTTCCATTGTAAGAAC+GGG + Chr2:3514380-3514399 None:intergenic 40.0%
GAAGGTCATCATACTCTTCT+TGG + Chr2:3512664-3512683 None:intergenic 40.0%
GAATAAGGTTAGAAAGGCGA+TGG - Chr2:3511138-3511157 MsG0280006566.01.T01:CDS 40.0%
GAGAAAATATGGACCTACCA+GGG + Chr2:3512796-3512815 None:intergenic 40.0%
GATGGAATGGATGCAGATTA+CGG - Chr2:3512103-3512122 MsG0280006566.01.T01:intron 40.0%
GCACAGTCAGTTTGAATATC+AGG + Chr2:3511389-3511408 None:intergenic 40.0%
GCTTAGATACTTTGAGCAGA+AGG + Chr2:3512682-3512701 None:intergenic 40.0%
GTTGCAGGAGTAGTGTAATA+TGG - Chr2:3515975-3515994 MsG0280006566.01.T01:CDS 40.0%
TAGGTTCCATTGTAAGAACG+GGG + Chr2:3514379-3514398 None:intergenic 40.0%
TCATATCTTGATATGCACCC+TGG - Chr2:3512776-3512795 MsG0280006566.01.T01:intron 40.0%
TCCTTAGATCAGTCAACTGA+CGG + Chr2:3514740-3514759 None:intergenic 40.0%
TCTATGGCAAGGATTTCAAC+TGG + Chr2:3515684-3515703 None:intergenic 40.0%
TGAGAAAATATGGACCTACC+AGG + Chr2:3512797-3512816 None:intergenic 40.0%
TGAGTTCAAGGAACAGCATA+GGG - Chr2:3513537-3513556 MsG0280006566.01.T01:intron 40.0%
TGCAGATTACGCATCCTATT+TGG - Chr2:3511787-3511806 MsG0280006566.01.T01:intron 40.0%
TGGTGGTTCAGATATCAACA+AGG - Chr2:3512075-3512094 MsG0280006566.01.T01:intron 40.0%
TGTGCTAGTAATCATAGCAG+CGG - Chr2:3512166-3512185 MsG0280006566.01.T01:intron 40.0%
TGTGCTAGTAATCATAGTGG+TGG - Chr2:3511515-3511534 MsG0280006566.01.T01:CDS 40.0%
! ATGGACGAGAGTATAGTCTA+TGG - Chr2:3514768-3514787 MsG0280006566.01.T01:CDS 40.0%
! CAACAAGGACAATGATGGAA+TGG - Chr2:3512090-3512109 MsG0280006566.01.T01:intron 40.0%
! CAGAAAATTTTCACGACACG+GGG - Chr2:3515914-3515933 MsG0280006566.01.T01:CDS 40.0%
! CGCAGAAAATTTTCACGACA+CGG - Chr2:3515912-3515931 MsG0280006566.01.T01:CDS 40.0%
! CGGTTCATTAGTTTCTGATG+TGG - Chr2:3512186-3512205 MsG0280006566.01.T01:intron 40.0%
! CGTGTCGTGAAAATTTTCTG+CGG + Chr2:3515914-3515933 None:intergenic 40.0%
! GCAGAAAATTTTCACGACAC+GGG - Chr2:3515913-3515932 MsG0280006566.01.T01:CDS 40.0%
! GCAGATGAAGATTGGCTAAT+AGG - Chr2:3511290-3511309 MsG0280006566.01.T01:CDS 40.0%
! GGAGGAACTTTTATTCGTGA+TGG - Chr2:3516411-3516430 MsG0280006566.01.T01:CDS 40.0%
! GGTACTGAGATCGTCATATT+TGG - Chr2:3515226-3515245 MsG0280006566.01.T01:CDS 40.0%
! TCATGTGTCACTCTTACTCT+TGG - Chr2:3515367-3515386 MsG0280006566.01.T01:CDS 40.0%
! TCTTGCGTGGATTCTTTTTC+TGG - Chr2:3513569-3513588 MsG0280006566.01.T01:intron 40.0%
! TGCAGATTACGCATCCTTTT+TGG - Chr2:3511463-3511482 MsG0280006566.01.T01:CDS 40.0%
! TGGCTCTATGCAGATAATGA+TGG - Chr2:3516438-3516457 MsG0280006566.01.T01:CDS 40.0%
! TTTGGTGGCTAGATGAACAT+AGG + Chr2:3514615-3514634 None:intergenic 40.0%
!! CATGTTGCTGTTTATGTTGG+AGG - Chr2:3516393-3516412 MsG0280006566.01.T01:CDS 40.0%
!! CTATTTGCTTGTTGTCTTCG+GGG + Chr2:3512580-3512599 None:intergenic 40.0%
!! GACTATTGTTGATGGCGATA+AGG - Chr2:3512246-3512265 MsG0280006566.01.T01:intron 40.0%
!! GCTATTTGCTTGTTGTCTTC+GGG + Chr2:3512581-3512600 None:intergenic 40.0%
!! TCAAGTTGGTGTTAGAGCTT+TGG - Chr2:3516326-3516345 MsG0280006566.01.T01:CDS 40.0%
!!! GTTTTGGTTATTGATGGAGG+AGG - Chr2:3516189-3516208 MsG0280006566.01.T01:CDS 40.0%
AAACATGTTTCGTCACGCCA+AGG + Chr2:3513835-3513854 None:intergenic 45.0%
AAGACAACTGCGAAGACTTG+TGG - Chr2:3511218-3511237 MsG0280006566.01.T01:CDS 45.0%
AGAGTGCGAGAGTTAAGAAG+TGG + Chr2:3514331-3514350 None:intergenic 45.0%
AGGAAGCTGAAGAAGAGTTG+AGG + Chr2:3515467-3515486 None:intergenic 45.0%
AGGTTCCATTGTAAGAACGG+GGG + Chr2:3514378-3514397 None:intergenic 45.0%
AGTGCATACACAGGTGACAA+TGG - Chr2:3511317-3511336 MsG0280006566.01.T01:CDS 45.0%
ATCTTGATATGCACCCTGGT+AGG - Chr2:3512780-3512799 MsG0280006566.01.T01:intron 45.0%
CAACAAGGACAGTGATGAAG+TGG - Chr2:3511655-3511674 MsG0280006566.01.T01:intron 45.0%
CACTAACACATCCAATGTGG+AGG - Chr2:3512291-3512310 MsG0280006566.01.T01:intron 45.0%
CACTCTAGCCATGAAACCAA+TGG - Chr2:3514345-3514364 MsG0280006566.01.T01:intron 45.0%
CATCCAGTGTTCCAGATGTA+TGG - Chr2:3516069-3516088 MsG0280006566.01.T01:CDS 45.0%
CCGTTCTTACAATGGAACCT+AGG - Chr2:3514378-3514397 MsG0280006566.01.T01:intron 45.0%
CGACAAGGACAGTGATGAAA+TGG - Chr2:3511763-3511782 MsG0280006566.01.T01:intron 45.0%
CTCCACATTGGATGTGTTAG+TGG + Chr2:3512293-3512312 None:intergenic 45.0%
CTGAGTTCAAGGAACAGCAT+AGG - Chr2:3513536-3513555 MsG0280006566.01.T01:intron 45.0%
GGAATTGGAAAGAGCTGTCA+AGG + Chr2:3514020-3514039 None:intergenic 45.0%
GTAAACAGGATTCTCTCCTG+TGG - Chr2:3515639-3515658 MsG0280006566.01.T01:CDS 45.0%
GTGCAGTTGGCACAAAACAT+GGG - Chr2:3516246-3516265 MsG0280006566.01.T01:CDS 45.0%
GTGTCACATATCTCTGCTGT+TGG + Chr2:3516009-3516028 None:intergenic 45.0%
TAAGGTTAGAAAGGCGATGG+AGG - Chr2:3511141-3511160 MsG0280006566.01.T01:CDS 45.0%
TATCTCCCCCGTTCTTACAA+TGG - Chr2:3514370-3514389 MsG0280006566.01.T01:intron 45.0%
TATGTGCCACGATATCCAGT+CGG + Chr2:3515199-3515218 None:intergenic 45.0%
TCCGTCAGTTGACTGATCTA+AGG - Chr2:3514736-3514755 MsG0280006566.01.T01:intron 45.0%
TGCAGTTGGCACAAAACATG+GGG - Chr2:3516247-3516266 MsG0280006566.01.T01:CDS 45.0%
TGCCACTAACACATCCAATG+TGG - Chr2:3512288-3512307 MsG0280006566.01.T01:intron 45.0%
TGCTCTTGTTGGAGGGAATT+TGG - Chr2:3516224-3516243 MsG0280006566.01.T01:CDS 45.0%
TTGGCGTGACGAAACATGTT+TGG - Chr2:3513834-3513853 MsG0280006566.01.T01:intron 45.0%
! AGGTGACAATGGTGGTGAAA+TGG - Chr2:3511328-3511347 MsG0280006566.01.T01:CDS 45.0%
! GTTCTTTTGCATGTGGTTGC+AGG - Chr2:3515960-3515979 MsG0280006566.01.T01:CDS 45.0%
! TGGTCTGGGATTGTTGTGAA+TGG - Chr2:3516270-3516289 MsG0280006566.01.T01:CDS 45.0%
!!! AGGGTTTTGTTTCTCTTGCG+TGG - Chr2:3513556-3513575 MsG0280006566.01.T01:intron 45.0%
!! AAATTATATATATGATTTAA+GGG - Chr2:3512980-3512999 MsG0280006566.01.T01:intron 5.0%
!! TAAATTATATATATGATTTA+AGG - Chr2:3512979-3512998 MsG0280006566.01.T01:intron 5.0%
AAGGCTGAAATCTTCCCACG+AGG + Chr2:3513816-3513835 None:intergenic 50.0%
AGCATGAGGTGTGCTCTTGT+TGG - Chr2:3516213-3516232 MsG0280006566.01.T01:CDS 50.0%
AGTTGGCACAAAACATGGGG+TGG - Chr2:3516250-3516269 MsG0280006566.01.T01:CDS 50.0%
ATCTGACCGACTGGATATCG+TGG - Chr2:3515190-3515209 MsG0280006566.01.T01:CDS 50.0%
ATGAGGTGTGCTCTTGTTGG+AGG - Chr2:3516216-3516235 MsG0280006566.01.T01:CDS 50.0%
CACAAAACATGGGGTGGTCT+GGG - Chr2:3516256-3516275 MsG0280006566.01.T01:CDS 50.0%
CAGCAATCAAGTCACAGCCT+AGG + Chr2:3514398-3514417 None:intergenic 50.0%
CGACAAGGACAGTGATGAAG+TGG - Chr2:3511871-3511890 MsG0280006566.01.T01:intron 50.0%
CTCTCACTTGATGTGTTGGG+TGG - Chr2:3512939-3512958 MsG0280006566.01.T01:intron 50.0%
GAACGGGGGAGATATACCAT+TGG + Chr2:3514364-3514383 None:intergenic 50.0%
GCATACACAGGTGACAATGG+TGG - Chr2:3511320-3511339 MsG0280006566.01.T01:CDS 50.0%
GGTGCAGTTGGCACAAAACA+TGG - Chr2:3516245-3516264 MsG0280006566.01.T01:CDS 50.0%
TAGAAAGGCGATGGAGGAGA+CGG - Chr2:3511147-3511166 MsG0280006566.01.T01:CDS 50.0%
TCCAGATGTATGGCCAGTCT+CGG - Chr2:3516079-3516098 MsG0280006566.01.T01:CDS 50.0%
TCGTGGGAAGATTTCAGCCT+TGG - Chr2:3513815-3513834 MsG0280006566.01.T01:intron 50.0%
TGAGGTGTGCTCTTGTTGGA+GGG - Chr2:3516217-3516236 MsG0280006566.01.T01:CDS 50.0%
TTGCAGAAAGTGAGCCTCGT+GGG - Chr2:3513799-3513818 MsG0280006566.01.T01:intron 50.0%
TTTGCAGAAAGTGAGCCTCG+TGG - Chr2:3513798-3513817 MsG0280006566.01.T01:intron 50.0%
! TGGCCATACATCTGGAACAC+TGG + Chr2:3516075-3516094 None:intergenic 50.0%
! TTGATGGAGGAGGAAGCATG+AGG - Chr2:3516199-3516218 MsG0280006566.01.T01:CDS 50.0%
!! TGGAGGGAATTTGGTGCAGT+TGG - Chr2:3516233-3516252 MsG0280006566.01.T01:CDS 50.0%
ACGCCATCTAGAAACACGGC+AGG - Chr2:3512715-3512734 MsG0280006566.01.T01:intron 55.0%
AGAAAGGCGATGGAGGAGAC+GGG - Chr2:3511148-3511167 MsG0280006566.01.T01:CDS 55.0%
CCAGATGTATGGCCAGTCTC+GGG - Chr2:3516080-3516099 MsG0280006566.01.T01:CDS 55.0%
CCATCTAGAAACACGGCAGG+GGG - Chr2:3512718-3512737 MsG0280006566.01.T01:intron 55.0%
CGCCATCTAGAAACACGGCA+GGG - Chr2:3512716-3512735 MsG0280006566.01.T01:intron 55.0%
GCACAAAACATGGGGTGGTC+TGG - Chr2:3516255-3516274 MsG0280006566.01.T01:CDS 55.0%
GCCATCTAGAAACACGGCAG+GGG - Chr2:3512717-3512736 MsG0280006566.01.T01:intron 55.0%
TCTAGAAACACGGCAGGGGG+TGG - Chr2:3512721-3512740 MsG0280006566.01.T01:intron 60.0%
TGGCCAGTCTCGGGCATTCT+CGG - Chr2:3516089-3516108 MsG0280006566.01.T01:CDS 60.0%
! CCCGAGACTGGCCATACATC+TGG + Chr2:3516083-3516102 None:intergenic 60.0%
!! CCCCCTGCCGTGTTTCTAGA+TGG + Chr2:3512721-3512740 None:intergenic 60.0%
AAGGCGATGGAGGAGACGGG+AGG - Chr2:3511151-3511170 MsG0280006566.01.T01:CDS 65.0%
GCCAGTCTCGGGCATTCTCG+GGG - Chr2:3516091-3516110 MsG0280006566.01.T01:CDS 65.0%
GGCCAGTCTCGGGCATTCTC+GGG - Chr2:3516090-3516109 MsG0280006566.01.T01:CDS 65.0%
GCCCCGAGAATGCCCGAGAC+TGG + Chr2:3516095-3516114 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3511059 3516494 3511059 ID=MsG0280006566.01;Name=MsG0280006566.01
Chr2 mRNA 3511059 3516494 3511059 ID=MsG0280006566.01.T01;Parent=MsG0280006566.01;Name=MsG0280006566.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0.66|0.5|4|0|726
Chr2 exon 3515142 3516494 3515142 ID=MsG0280006566.01.T01:exon:800;Parent=MsG0280006566.01.T01
Chr2 exon 3514756 3514996 3514756 ID=MsG0280006566.01.T01:exon:799;Parent=MsG0280006566.01.T01
Chr2 exon 3513956 3514035 3513956 ID=MsG0280006566.01.T01:exon:798;Parent=MsG0280006566.01.T01
Chr2 exon 3511059 3511565 3511059 ID=MsG0280006566.01.T01:exon:797;Parent=MsG0280006566.01.T01
Chr2 CDS 3515142 3516494 3515142 ID=MsG0280006566.01.T01:cds;Parent=MsG0280006566.01.T01
Chr2 CDS 3514756 3514996 3514756 ID=MsG0280006566.01.T01:cds;Parent=MsG0280006566.01.T01
Chr2 CDS 3513956 3514035 3513956 ID=MsG0280006566.01.T01:cds;Parent=MsG0280006566.01.T01
Chr2 CDS 3511059 3511565 3511059 ID=MsG0280006566.01.T01:cds;Parent=MsG0280006566.01.T01
Gene Sequence

>MsG0280006566.01.T01

ATGGGGCGTGCAATCAAGGTTAACCCTGTTGATTCTCATATGAGTGAGAATTTGGAAAGTCCTTATTCTGACGATAAAAGAATAAGGTTAGAAAGGCGATGGAGGAGACGGGAGGCAATGAATAATAGTTTGAAGCACAATTGTTTCACTACTGCTACAAAGACAACTGCGAAGACTTGTGGAAATACTGCTGCTTTAATTGATAAAAATGATCATTTGATAGATGAAGATGCAGATGAAGATTGGCTAATAGGTTTGAGTGCATACACAGGTGACAATGGTGGTGAAATGGATGAAGATTGCAGATCCTTTTTACCTACACATGATCCTGATATTCAAACTGACTGTGCTAATAATCATAGTGGCGGTTCAAATGGCAACAACAATGACATTGATGAAATGGATGCAGATTACGCATCCTTTTTGGCTACTTATAATCATGATATTGAAACTGATTGTGCTAGTAATCATAGTGGTGATTCAAATATCAACAAGGACAGTGATGAAATGGATGCAGATTACGCATCCTTTTTAGCTACTTATAATCATGACATTGAAACTGATTTTGCTTGTAACCATAGTGGTGATTCAAATATCAACAAGGACAGTGATGAAGTGGATTCAGATTACGCATCCTATTTGGCTGCTTATAATCATTATATTGAAACTGATTGTGCTAGTAATCATAGTGGTGATTCAAATATCGACAAGGACAGTGATGAAATGGATGCAGATTACGCATCCTATTTGGCTGCTTATAATCATGATATTGAAACTGATTGTGCTAGTAATCATAGTGGTGATTCAAATATCGACAAGGACAGTGATGAAGTGGATGCAGATTACGCATCCTTTTTGTGTACACATGATCCTGATATTGAAACTGGTTGTGTTAGTAATCACAGTGAAGGTTCAAATGGCAACAACAACGACAGTGATGAAATGGAAGCAGATTATGCATCTTATTTGGCTGCTTATAATCTTGATATTGAAACTGATTGTGCTAGTAATCATAGTGGTGGTTCAGATATCAACAAGGACAATGATGGAATGGATGCAGATTACGGATCCTTTTTGCCTACAAATGATCCTGATATTGAAACTTATTGTGCTAGTAATCATAGCAGCGGTTCATTAGTTTCTGATGTGGAATTTAATAAAGATTATGAACAGTTCCTTAATTCTGTGACTATTGTTGATGGCGATAAGGAGTATTTTCGTGATAAGAATGCCACTAACACATCCAATGTGGAGGATGATAGTAATTCCTCTGATTCAGATCTAATTATTTTGGATTCTTTTCCAATTTGTGGAAACACCTCTTTCGTTTCTTCAAAGACATATGATTCATCATGTTTTGGAGAAGAAACGAACCCCGAAGACAACAAGCAAATAGCTGCTTATGATCATTCTCTATTTAGGAGAACACTTATGGAATGTCTTGAAAGGCCTTATGACCAAGAAGAGTATGATGACCTTCTGCTCAAAGTATCTAAGCGAACGAAAAAAGAACGCCATCTAGAAACACGGCAGGGGGTGGTTAAATTATATCACTGTGATGGTCTCAGCAAATCATATCTTGATATGCACCCTGATCTAGTAAAAGCTATTGCTGAGTTCAAGGAACAGCATAGGGTTTTGTTTCTCTTGCGTGGATTCTTTTTCTGGTTGCAATGTAATATGGATTCTCTACCAACAGCAGAGATATGTGACACAAACGCAACACATTTAACAAATGGTGACTTGAGGATACTTCATCCAGTGTTCCAGATGTATGGCCAGTCTCGGGCATTCTCGGGGCCTGTTGTTACCGTAAAAGTGTTTGAAGACAATGTGTTGGTAAGAGAACTTCTTGAAACAAAAGGAGAAGGAAGAGTTTTGGTTATTGATGGAGGAGGAAGCATGAGGTGTGCTCTTGTTGGAGGGAATTTGGTGCAGTTGGCACAAAACATGGGGTGGTCTGGGATTGTTGTGAATGGTTGTATTAGAGATGTGGATGAGATTAATTTGTGTCAAGTTGGTGTTAGAGCTTTGGCTTCTCATCCACTTAAATCCAATAAAAACGGTACTGGTGAAAAACATGTTGCTGTTTATGTTGGAGGAACTTTTATTCGTGATGGAGAATGGCTCTATGCAGATAATGATGGTATCATTGTATCCAAGTTTGAGTTGTCCATTTGA

Protein sequence

>MsG0280006566.01.T01

MGRAIKVNPVDSHMSENLESPYSDDKRIRLERRWRRREAMNNSLKHNCFTTATKTTAKTCGNTAALIDKNDHLIDEDADEDWLIGLSAYTGDNGGEMDEDCRSFLPTHDPDIQTDCANNHSGGSNGNNNDIDEMDADYASFLATYNHDIETDCASNHSGDSNINKDSDEMDADYASFLATYNHDIETDFACNHSGDSNINKDSDEVDSDYASYLAAYNHYIETDCASNHSGDSNIDKDSDEMDADYASYLAAYNHDIETDCASNHSGDSNIDKDSDEVDADYASFLCTHDPDIETGCVSNHSEGSNGNNNDSDEMEADYASYLAAYNLDIETDCASNHSGGSDINKDNDGMDADYGSFLPTNDPDIETYCASNHSSGSLVSDVEFNKDYEQFLNSVTIVDGDKEYFRDKNATNTSNVEDDSNSSDSDLIILDSFPICGNTSFVSSKTYDSSCFGEETNPEDNKQIAAYDHSLFRRTLMECLERPYDQEEYDDLLLKVSKRTKKERHLETRQGVVKLYHCDGLSKSYLDMHPDLVKAIAEFKEQHRVLFLLRGFFFWLQCNMDSLPTAEICDTNATHLTNGDLRILHPVFQMYGQSRAFSGPVVTVKVFEDNVLVRELLETKGEGRVLVIDGGGSMRCALVGGNLVQLAQNMGWSGIVVNGCIRDVDEINLCQVGVRALASHPLKSNKNGTGEKHVAVYVGGTFIRDGEWLYADNDGIIVSKFELSI*