AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046986.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046986.01.T01 MTR_4g118640 98.605 717 10 0 1 717 1 717 0.0 1463
MsG0880046986.01.T01 MTR_4g118640 97.926 675 14 0 1 675 1 675 0.0 1367
MsG0880046986.01.T01 MTR_4g118640 92.329 717 10 1 1 717 1 672 0.0 1352
MsG0880046986.01.T01 MTR_2g020590 80.484 702 130 2 16 717 21 715 0.0 1157
MsG0880046986.01.T01 MTR_8g068300 71.736 651 184 0 63 713 58 708 0.0 1009
MsG0880046986.01.T01 MTR_8g068265 68.383 699 206 2 29 713 11 708 0.0 1009
MsG0880046986.01.T01 MTR_3g107740 60.522 689 262 5 29 716 27 706 0.0 830
MsG0880046986.01.T01 MTR_3g107740 57.117 555 228 5 29 582 27 572 0.0 627
MsG0880046986.01.T01 MTR_7g005380 25.091 275 186 7 387 644 19 290 7.78e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046986.01.T01 AT4G15560 86.222 675 86 1 39 713 49 716 0.0 1215
MsG0880046986.01.T01 AT3G21500 74.194 713 133 4 1 713 13 674 0.0 1074
MsG0880046986.01.T01 AT3G21500 74.251 668 121 4 1 668 13 629 0.0 1003
MsG0880046986.01.T01 AT3G21500 74.102 668 121 5 1 668 13 628 0.0 996
MsG0880046986.01.T01 AT5G11380 56.369 683 271 8 37 717 43 700 0.0 762
MsG0880046986.01.T01 AT5G11380 52.930 546 230 8 37 580 43 563 0.0 561
MsG0880046986.01.T01 AT5G11380 54.080 527 216 7 37 561 43 545 0.0 557
MsG0880046986.01.T01 AT5G11380 54.175 515 210 7 37 549 43 533 0.0 541
MsG0880046986.01.T01 AT5G50850 25.088 283 192 7 379 644 19 298 7.49e-12 68.2

Find 200 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATTATTATAATATTAT+TGG 0.135713 8:-80663492 None:intergenic
GGACTGGAGAATTGAAATTA+TGG 0.234238 8:-80663435 None:intergenic
TCGGAACTTCAGCAAAATTA+TGG 0.235014 8:-80668740 None:intergenic
GAAGGATCAATTGGAGGATT+TGG 0.241782 8:+80668231 MsG0880046986.01.T01:CDS
AAGCGATACCGTTCAAATTT+CGG 0.245290 8:-80668931 None:intergenic
AATGATGTAGTTGCTGTTAT+TGG 0.259454 8:+80665923 MsG0880046986.01.T01:CDS
TTCTCATGTTGCTCAGTTCA+TGG 0.260981 8:+80668254 MsG0880046986.01.T01:CDS
AGGAAGAAGAAGTGTTCTTC+TGG 0.261298 8:-80664718 None:intergenic
GATCCATAACAAACAGAAAA+TGG 0.262473 8:-80664653 None:intergenic
ATCCATGTTATCACCGAAAA+AGG 0.271169 8:+80666446 MsG0880046986.01.T01:CDS
TTACCAACTGCTACTCTTGA+TGG 0.271724 8:+80666049 MsG0880046986.01.T01:CDS
CTTCTTCTTCTCACTCTCAA+TGG 0.274761 8:+80664745 MsG0880046986.01.T01:CDS
ATAAAATTCTTACTGGTAGA+AGG 0.282987 8:+80665404 MsG0880046986.01.T01:CDS
GAGAGTGAATATGATTCTTT+TGG 0.294675 8:+80665484 MsG0880046986.01.T01:CDS
CTGTCCATTGCAAATCTTAC+AGG 0.302421 8:-80667413 None:intergenic
TTCTTCTTCTCACTCTCAAT+GGG 0.302828 8:+80664746 MsG0880046986.01.T01:CDS
CGGCTGACCCGTAGCCCAAT+AGG 0.305029 8:-80668065 None:intergenic
GCTCAGTTCATGGCCCTTGA+TGG 0.326804 8:+80668264 MsG0880046986.01.T01:CDS
GGACATTTAGGTTCAAGTTT+AGG 0.343066 8:+80665196 MsG0880046986.01.T01:CDS
GATAATATCTTTGTCAGCTT+TGG 0.345890 8:-80666759 None:intergenic
TACCCTCATAAAATTCTTAC+TGG 0.350533 8:+80665397 MsG0880046986.01.T01:CDS
TTGTTATTCTACCTGGTCAT+AGG 0.354959 8:-80666957 None:intergenic
TATAATATTATTGGTTAAGA+AGG 0.358991 8:-80663483 None:intergenic
AGACAGACTAATGGGTTATC+TGG 0.360543 8:+80665445 MsG0880046986.01.T01:CDS
GATGAGTATATTGCACAAAA+AGG 0.361483 8:-80666920 None:intergenic
GAGAATTGAAATTATGGGTT+GGG 0.376880 8:-80663429 None:intergenic
GGAGCCATCACCACCATGTT+GGG 0.392304 8:-80667506 None:intergenic
TACTATATCGGTCCTGTTGA+TGG 0.393097 8:+80666353 MsG0880046986.01.T01:CDS
ATAATACTAACTAATTATAA+AGG 0.398059 8:+80668827 MsG0880046986.01.T01:three_prime_UTR
ACCTCTCTCAATTCTCTAAG+AGG 0.402113 8:-80666130 None:intergenic
TTCCGATACCCGAGGGGAAA+TGG 0.408784 8:+80667596 MsG0880046986.01.T01:CDS
AGGAGAAAGAGTAGCCCTAT+TGG 0.409345 8:+80668050 MsG0880046986.01.T01:CDS
TAGGGAGTAACAAAACGAAT+TGG 0.410575 8:+80666236 MsG0880046986.01.T01:intron
TCGATCCTTGATTCGCAGTC+TGG 0.418420 8:+80668176 MsG0880046986.01.T01:CDS
TCATGCTTCACTTTCTGAGA+TGG 0.428620 8:+80664830 MsG0880046986.01.T01:CDS
TTGTCAAATAGTTGCATGTA+TGG 0.431670 8:+80668687 MsG0880046986.01.T01:three_prime_UTR
CATGCTTCACTTTCTGAGAT+GGG 0.434339 8:+80664831 MsG0880046986.01.T01:CDS
ACCGTAGAAGAAGGATCAAT+TGG 0.435054 8:+80668222 MsG0880046986.01.T01:CDS
CAAAGCATCTTGTTGGGAAT+CGG 0.442480 8:-80666832 None:intergenic
TTTAACAGATTGGGAAAGGT+AGG 0.444040 8:+80668016 MsG0880046986.01.T01:intron
GAGCTTGGACTCTACTATAT+CGG 0.444711 8:+80666341 MsG0880046986.01.T01:CDS
GGAGAAAGAGTAGCCCTATT+GGG 0.447212 8:+80668051 MsG0880046986.01.T01:CDS
CCCACGTCAAAGCATCTTGT+TGG 0.447447 8:-80666839 None:intergenic
TTGAATTGCTTTCCAGTTGG+TGG 0.448517 8:-80666677 None:intergenic
GCTGCGATGGGAGGTGGAAC+TGG 0.448982 8:+80666791 MsG0880046986.01.T01:CDS
TCCAGTTGGTGGATCAAACT+TGG 0.452909 8:-80666666 None:intergenic
ATGGACAGAGCTGGATTAGT+TGG 0.453708 8:+80667428 MsG0880046986.01.T01:CDS
TGCCATTTCCCCTCGGGTAT+CGG 0.457752 8:-80667598 None:intergenic
ATACCATGAGACAGACTAAT+GGG 0.461341 8:+80665437 MsG0880046986.01.T01:CDS
ACCAAGTTTGATCCACCAAC+TGG 0.463045 8:+80666665 MsG0880046986.01.T01:CDS
ATAGTGTCAAGTAGTGGAGT+AGG 0.463493 8:-80664876 None:intergenic
AACCAATAGGAATGGCTGTT+GGG 0.466377 8:+80665879 MsG0880046986.01.T01:intron
GCAACAGTGTTCAACATACT+TGG 0.468649 8:+80668498 MsG0880046986.01.T01:CDS
TGCACGTTTCTGCAAGCCAT+TGG 0.468795 8:+80668152 MsG0880046986.01.T01:CDS
GCCATTGACAATTGGTCAGC+AGG 0.472373 8:-80668450 None:intergenic
TAAATTATTTAACTAGATAA+CGG 0.475058 8:+80668654 MsG0880046986.01.T01:three_prime_UTR
ACAACAACCTTTGTTTGTGT+TGG 0.477977 8:-80664570 None:intergenic
TGGAGGTCCTATGCATGAAT+TGG 0.478037 8:+80666256 MsG0880046986.01.T01:CDS
GGAAGAAGAAGTGTTCTTCT+GGG 0.482567 8:-80664717 None:intergenic
GACTGGAGAATTGAAATTAT+GGG 0.483848 8:-80663434 None:intergenic
GTCAGCCGTTCAGAACTGTT+TGG 0.487689 8:+80668080 MsG0880046986.01.T01:CDS
ATACATGCTGCGATGGGAGG+TGG 0.489733 8:+80666785 MsG0880046986.01.T01:CDS
CACCAATGCCATTTCCCCTC+GGG 0.491891 8:-80667604 None:intergenic
TAAGACCAGCCATTGACAAT+TGG 0.492812 8:-80668458 None:intergenic
ATGTTGTATCGTGTATATTG+AGG 0.493168 8:-80668587 None:intergenic
AAAGCTCCTACAGGTGGTAT+AGG 0.493402 8:-80666073 None:intergenic
CCACGTCAAAGCATCTTGTT+GGG 0.494671 8:-80666838 None:intergenic
CCTCCCCAACATGGTGGTGA+TGG 0.495137 8:+80667502 MsG0880046986.01.T01:CDS
AGAATTGAGAGAGGTTGCAA+AGG 0.496003 8:+80666138 MsG0880046986.01.T01:CDS
TCAGCGGCTTGCTCTGCGTA+TGG 0.497079 8:-80666479 None:intergenic
ACTACTATTTCAGCTGGACT+TGG 0.499592 8:+80665523 MsG0880046986.01.T01:CDS
GTGATAACATGGATCAATAC+AGG 0.499825 8:-80666437 None:intergenic
TCCAATTGATCCTTCTTCTA+CGG 0.501095 8:-80668223 None:intergenic
TGTTGTATCGTGTATATTGA+GGG 0.501224 8:-80668586 None:intergenic
CATACCATGAGACAGACTAA+TGG 0.501531 8:+80665436 MsG0880046986.01.T01:CDS
ACAAACAAGAGAGGCATTAG+AGG 0.503095 8:+80668521 MsG0880046986.01.T01:CDS
CGTGGTATGATCAGTGGTAC+TGG 0.504327 8:+80666302 MsG0880046986.01.T01:CDS
GGAGAATTGAAATTATGGGT+TGG 0.505814 8:-80663430 None:intergenic
ATCGTCGATGGCTGCTGCAG+TGG 0.507645 8:-80667561 None:intergenic
CTTTGAGTAGTGCTCTAAGT+AGG 0.507922 8:+80666092 MsG0880046986.01.T01:CDS
GTAGTTGCTGTTATTGGTGA+TGG 0.508169 8:+80665929 MsG0880046986.01.T01:CDS
GTGATCCATGGTCAATATAT+CGG 0.508554 8:-80668428 None:intergenic
ATACTCATCATTCTTGCAAA+GGG 0.512668 8:+80666934 MsG0880046986.01.T01:CDS
GGAATGCCTTTGTACTCGGC+TGG 0.514100 8:-80667635 None:intergenic
TCTATGTTATGACCATCAAC+AGG 0.515677 8:-80666365 None:intergenic
GGCTGTTGGGAGAGATCTGA+AGG 0.516771 8:+80665892 MsG0880046986.01.T01:CDS
GCAAAATTATGGTGTCATTG+AGG 0.518092 8:-80668729 None:intergenic
GAGTAGCCCTATTGGGCTAC+GGG 0.519027 8:+80668058 MsG0880046986.01.T01:CDS
CAAGCCATGTTGTTCAACTA+AGG 0.519980 8:-80668112 None:intergenic
AAGAGGAATGCCTTTGTACT+CGG 0.521348 8:-80667639 None:intergenic
GACAACTATGCAGTGGAGGC+CGG 0.522608 8:+80668392 MsG0880046986.01.T01:intron
CTTGCAAAGGGCCTATGACC+AGG 0.524812 8:+80666946 MsG0880046986.01.T01:CDS
AGATTTGCAATGGACAGAGC+TGG 0.525132 8:+80667419 MsG0880046986.01.T01:CDS
AGTTCAACTACTATTTCAGC+TGG 0.526493 8:+80665517 MsG0880046986.01.T01:CDS
GGCTGACCCGTAGCCCAATA+GGG 0.528076 8:-80668064 None:intergenic
ACACCAATGCCATTTCCCCT+CGG 0.529099 8:-80667605 None:intergenic
TACCCGAGGGGAAATGGCAT+TGG 0.530322 8:+80667602 MsG0880046986.01.T01:CDS
GCTGACCAATTGTCAATGGC+TGG 0.531698 8:+80668453 MsG0880046986.01.T01:CDS
GCACTACTCAAAGCTCCTAC+AGG 0.533764 8:-80666082 None:intergenic
GAACCAATAGGAATGGCTGT+TGG 0.533777 8:+80665878 MsG0880046986.01.T01:intron
CAAAGCTCTGCTTCATCAGA+AGG 0.534683 8:-80667527 None:intergenic
ACCTGCTGACCAATTGTCAA+TGG 0.535095 8:+80668449 MsG0880046986.01.T01:CDS
TAAAATTCTTACTGGTAGAA+GGG 0.535770 8:+80665405 MsG0880046986.01.T01:CDS
TTCCATCTAAAAGACCATCA+AGG 0.536693 8:-80668278 None:intergenic
TATGAAGCTATGAACAATGC+TGG 0.538515 8:+80665974 MsG0880046986.01.T01:CDS
GCTTCCTGTAAGATTTGCAA+TGG 0.538600 8:+80667409 MsG0880046986.01.T01:CDS
GTCAAAACTACTAATAGTAC+CGG 0.538944 8:+80666413 MsG0880046986.01.T01:CDS
CCATGGTCAATATATCGGTC+GGG 0.539704 8:-80668423 None:intergenic
GATAAGATTCTGTGGGATGT+TGG 0.539760 8:+80665268 MsG0880046986.01.T01:CDS
AGGAGCCATCACCACCATGT+TGG 0.540606 8:-80667507 None:intergenic
TCACAAGGTGTTACAAAAGA+AGG 0.540930 8:-80664693 None:intergenic
AGAGTAGCCCTATTGGGCTA+CGG 0.541980 8:+80668057 MsG0880046986.01.T01:CDS
GTACAAAGGCATTCCTCTTG+AGG 0.542688 8:+80667643 MsG0880046986.01.T01:CDS
TATCGCAATACATGCTGCGA+TGG 0.543634 8:+80666778 MsG0880046986.01.T01:CDS
AAAGGTAGGATACTAATTGA+AGG 0.544500 8:+80668030 MsG0880046986.01.T01:CDS
CCAACAAGATGCTTTGACGT+GGG 0.550307 8:+80666839 MsG0880046986.01.T01:CDS
CGTTCAGAACTGTTTGGCTG+CGG 0.550458 8:+80668086 MsG0880046986.01.T01:CDS
TATACTCATCATTCTTGCAA+AGG 0.554665 8:+80666933 MsG0880046986.01.T01:CDS
GGAGTAACAAAACGAATTGG+AGG 0.556176 8:+80666239 MsG0880046986.01.T01:CDS
CTCGGGTATCGGAAACAACT+CGG 0.556658 8:-80667587 None:intergenic
GCTGCAGGTCTAGCTTGTGA+AGG 0.558594 8:+80666890 MsG0880046986.01.T01:CDS
ATATTAACCAACACAAACAA+AGG 0.565171 8:+80664563 MsG0880046986.01.T01:five_prime_UTR
GTTCTGATCACCGTAGAAGA+AGG 0.565510 8:+80668213 MsG0880046986.01.T01:CDS
GCTGGATTAGTTGGATCAGA+TGG 0.566290 8:+80667437 MsG0880046986.01.T01:CDS
GTGTCAAGTAGTGGAGTAGG+AGG 0.566676 8:-80664873 None:intergenic
TCCATGGTCAATATATCGGT+CGG 0.567471 8:-80668424 None:intergenic
TCTGTGGGATGTTGGTCACC+AGG 0.567485 8:+80665276 MsG0880046986.01.T01:CDS
CATGCCGTTACATTTGCTGC+AGG 0.567800 8:+80666875 MsG0880046986.01.T01:CDS
TCCATCTAAAAGACCATCAA+GGG 0.567878 8:-80668277 None:intergenic
CACCTCAGGATAAGATTCTG+TGG 0.568742 8:+80665260 MsG0880046986.01.T01:CDS
TATGGCATGCCTCCCCAACA+TGG 0.569047 8:+80667493 MsG0880046986.01.T01:CDS
CGAATCAAGGATCGATCCAA+TGG 0.575852 8:-80668168 None:intergenic
TAGTTAATAGTGTCAAGTAG+TGG 0.576094 8:-80664882 None:intergenic
ATCTTGTTGGGAATCGGCGA+TGG 0.577057 8:-80666826 None:intergenic
CCCAACAAGATGCTTTGACG+TGG 0.578877 8:+80666838 MsG0880046986.01.T01:CDS
TATCGGTCGGGAAGAACCAC+CGG 0.579648 8:-80668411 None:intergenic
TTCAGTGTTTCAAGAACTGG+GGG 0.580278 8:+80665175 MsG0880046986.01.T01:CDS
TATCTAAACCGAAATTTGAA+CGG 0.581558 8:+80668923 MsG0880046986.01.T01:three_prime_UTR
ATTGGTCAGCAGGTGATCCA+TGG 0.582909 8:-80668440 None:intergenic
CACTGTTGCTGCTATGTGAG+AGG 0.583769 8:-80668484 None:intergenic
ATCGCAATACATGCTGCGAT+GGG 0.585240 8:+80666779 MsG0880046986.01.T01:CDS
GCTTTGAATTGCTTTCCAGT+TGG 0.585632 8:-80666680 None:intergenic
TTAGTATTATAGTGCACGTG+TGG 0.587489 8:-80668814 None:intergenic
GTAGAAGAAGGATCAATTGG+AGG 0.595008 8:+80668225 MsG0880046986.01.T01:CDS
TGATTGTGAACGAAGTGGAC+TGG 0.596202 8:-80663451 None:intergenic
AACATGGATCAATACAGGAC+CGG 0.598177 8:-80666432 None:intergenic
GGTGATGGTGCTATGACAGC+GGG 0.598232 8:+80665944 MsG0880046986.01.T01:CDS
CAACAAGATGCTTTGACGTG+GGG 0.598949 8:+80666840 MsG0880046986.01.T01:CDS
TTATGAGTGTAGTACCTTGG+TGG 0.599520 8:-80664928 None:intergenic
CAAGCCGCTGACAAGTATCA+TGG 0.599890 8:+80666491 MsG0880046986.01.T01:CDS
TAATAATCATAATAACCATA+CGG 0.601091 8:+80663504 MsG0880046986.01.T01:five_prime_UTR
TTCGCAGCCAATTCATGCAT+AGG 0.601604 8:-80666263 None:intergenic
AAAAGATTGCTAATTTGCAG+AGG 0.602055 8:+80668960 MsG0880046986.01.T01:three_prime_UTR
TAACCCATTAGTCTGTCTCA+TGG 0.604663 8:-80665440 None:intergenic
ACAACTCGGTCGATCGTCGA+TGG 0.606839 8:-80667573 None:intergenic
CGCAGCCAAACAGTTCTGAA+CGG 0.607768 8:-80668085 None:intergenic
CGGTTTAGATAACAGAAATG+CGG 0.610437 8:-80668911 None:intergenic
TTACACAACATACTTTGCAG+AGG 0.610722 8:+80666721 MsG0880046986.01.T01:CDS
CCCGACCGATATATTGACCA+TGG 0.612239 8:+80668423 MsG0880046986.01.T01:CDS
GCAATACATGCTGCGATGGG+AGG 0.614477 8:+80666782 MsG0880046986.01.T01:CDS
TCTTCTTCTCACTCTCAATG+GGG 0.620235 8:+80664747 MsG0880046986.01.T01:CDS
ATTGGTTAAGAAGGAGACGT+GGG 0.620865 8:-80663474 None:intergenic
GAGCCATCACCACCATGTTG+GGG 0.622407 8:-80667505 None:intergenic
ACCTCAGGATAAGATTCTGT+GGG 0.622428 8:+80665261 MsG0880046986.01.T01:CDS
TGGAAAGCAATTCAAAGCAA+CGG 0.628196 8:+80666685 MsG0880046986.01.T01:CDS
GAACTTCCAGCCGAGTACAA+AGG 0.631347 8:+80667629 MsG0880046986.01.T01:CDS
TGGTGATGGTGCTATGACAG+CGG 0.633316 8:+80665943 MsG0880046986.01.T01:CDS
TTTCAGTGTTTCAAGAACTG+GGG 0.633346 8:+80665174 MsG0880046986.01.T01:CDS
ACCACAGGTGGTACATGACG+TGG 0.633741 8:+80667376 MsG0880046986.01.T01:intron
CCATCACCACCATGTTGGGG+AGG 0.634531 8:-80667502 None:intergenic
GAGTTGTTTCCGATACCCGA+GGG 0.637112 8:+80667589 MsG0880046986.01.T01:CDS
AGTGTTCTTCTGGGATCACA+AGG 0.638544 8:-80664708 None:intergenic
TGAAGCAGAGCTTTGTCACA+TGG 0.638669 8:+80667535 MsG0880046986.01.T01:CDS
AACTAGATAACGGCTAACGC+AGG 0.640406 8:+80668664 MsG0880046986.01.T01:three_prime_UTR
TAGACCTGCAGCAAATGTAA+CGG 0.641986 8:-80666879 None:intergenic
CGAGTTGTTTCCGATACCCG+AGG 0.642120 8:+80667588 MsG0880046986.01.T01:CDS
GCTTCCTTAGTTGAACAACA+TGG 0.642813 8:+80668108 MsG0880046986.01.T01:CDS
TCAGATGGTCCTACACATTG+TGG 0.645337 8:+80667452 MsG0880046986.01.T01:CDS
AACTATGCAGTGGAGGCCGG+TGG 0.646065 8:+80668395 MsG0880046986.01.T01:intron
GGTCCATCAAGAGTAGCAGT+TGG 0.647333 8:-80666052 None:intergenic
TGGCTTGCAGAAACGTGCAT+CGG 0.647415 8:-80668148 None:intergenic
TATTGGTTAAGAAGGAGACG+TGG 0.647941 8:-80663475 None:intergenic
TCAAAAGAACCACAATGTGT+AGG 0.648738 8:-80667461 None:intergenic
TCAGGAGCTGAAACAGCTTG+CGG 0.652001 8:+80665129 MsG0880046986.01.T01:intron
GTTGTATCGTGTATATTGAG+GGG 0.654052 8:-80668585 None:intergenic
ACTGTTGCTGCTATGTGAGA+GGG 0.660707 8:-80668483 None:intergenic
CAGTCTGGCAAAATCACATG+AGG 0.662811 8:+80668191 MsG0880046986.01.T01:CDS
TCCCACAGAATCTTATCCTG+AGG 0.670609 8:-80665262 None:intergenic
GATGGACCTATACCACCTGT+AGG 0.673324 8:+80666067 MsG0880046986.01.T01:CDS
TATGCTCGTGGTATGATCAG+TGG 0.678017 8:+80666296 MsG0880046986.01.T01:CDS
AAAGTTGACGAGTATGCTCG+TGG 0.686551 8:+80666284 MsG0880046986.01.T01:CDS
ACCTCTTAGAGAATTGAGAG+AGG 0.689978 8:+80666129 MsG0880046986.01.T01:CDS
CTACTCAAAGCTCCTACAGG+TGG 0.693731 8:-80666079 None:intergenic
GTGGGTGATTGTGAACGAAG+TGG 0.699805 8:-80663456 None:intergenic
CATACTTGGACAAACAAGAG+AGG 0.703939 8:+80668512 MsG0880046986.01.T01:CDS
ATTACCATGATACTTGTCAG+CGG 0.708984 8:-80666495 None:intergenic
GCTGTTGGGAGAGATCTGAA+GGG 0.712298 8:+80665893 MsG0880046986.01.T01:CDS
AGTTGTTTCCGATACCCGAG+GGG 0.719126 8:+80667590 MsG0880046986.01.T01:CDS
GGCATGCCTCCCCAACATGG+TGG 0.744567 8:+80667496 MsG0880046986.01.T01:CDS
GCTCTGCGTATGGATATCCG+CGG 0.805170 8:-80666469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAATTATTTAAATTA+AGG - Chr8:80667177-80667196 None:intergenic 0.0%
!! AAAAAAAAAATCAAAACATA+AGG - Chr8:80665367-80665386 None:intergenic 10.0%
!! ATAATACTAACTAATTATAA+AGG + Chr8:80668827-80668846 MsG0880046986.01.T01:three_prime_UTR 10.0%
!! CAAAGTAAAATTAAAAAATT+GGG - Chr8:80664296-80664315 None:intergenic 10.0%
!! TAAATTATTTAACTAGATAA+CGG + Chr8:80668654-80668673 MsG0880046986.01.T01:three_prime_UTR 10.0%
!! TATTATTATATATAGTAGTA+TGG - Chr8:80664530-80664549 None:intergenic 10.0%
!!! CAATTTTTTCAAATTAATAT+CGG + Chr8:80665663-80665682 MsG0880046986.01.T01:intron 10.0%
!! AAATTGAACAAAATTTATGT+AGG - Chr8:80667787-80667806 None:intergenic 15.0%
!! AACAATGAAACAAAAAATAA+AGG + Chr8:80664130-80664149 MsG0880046986.01.T01:intron 15.0%
!! AATTGAACAAAATTTATGTA+GGG - Chr8:80667786-80667805 None:intergenic 15.0%
!! ATTAAAAAATAATCCAGTAA+TGG + Chr8:80664403-80664422 MsG0880046986.01.T01:intron 15.0%
!! ATTTAATGTTTACATTGAAA+AGG - Chr8:80668331-80668350 None:intergenic 15.0%
!! GCAAAGTAAAATTAAAAAAT+TGG - Chr8:80664297-80664316 None:intergenic 15.0%
!! GTAATTGTTCAAAATATATA+AGG - Chr8:80666524-80666543 None:intergenic 15.0%
!! TAATAATCATAATAACCATA+CGG + Chr8:80663504-80663523 MsG0880046986.01.T01:five_prime_UTR 15.0%
!! TTTAATGTTTACATTGAAAA+GGG - Chr8:80668330-80668349 None:intergenic 15.0%
!!! AACATTTTGAAAAATTTATG+CGG + Chr8:80667218-80667237 MsG0880046986.01.T01:intron 15.0%
!!! AATTTTGAAAAACAACATTT+CGG - Chr8:80668762-80668781 None:intergenic 15.0%
!!! CATAAATTTTTCAAAATGTT+GGG - Chr8:80667218-80667237 None:intergenic 15.0%
!!! CGATATTAATTTGAAAAAAT+TGG - Chr8:80665665-80665684 None:intergenic 15.0%
!!! GAAAATATGTGAATTTTATA+GGG - Chr8:80667755-80667774 None:intergenic 15.0%
!!! GACAAAATGATATTTTTATA+GGG + Chr8:80666218-80666237 MsG0880046986.01.T01:intron 15.0%
!!! TATAACTTTTTTCATATGAT+GGG - Chr8:80666990-80667009 None:intergenic 15.0%
!!! TATAATATTATTGGTTAAGA+AGG - Chr8:80663486-80663505 None:intergenic 15.0%
!!! TGAAAATATGTGAATTTTAT+AGG - Chr8:80667756-80667775 None:intergenic 15.0%
!!! TGACAAAATGATATTTTTAT+AGG + Chr8:80666217-80666236 MsG0880046986.01.T01:intron 15.0%
!! ATGTCATAAGAAAAATACAA+AGG + Chr8:80668546-80668565 MsG0880046986.01.T01:exon 20.0%
!! TGAATAATGAAATAGAAAGA+TGG + Chr8:80665785-80665804 MsG0880046986.01.T01:intron 20.0%
!! TGACTAAAAATATATTCAAC+TGG + Chr8:80667949-80667968 MsG0880046986.01.T01:intron 20.0%
!! TGTCATAAGAAAAATACAAA+GGG + Chr8:80668547-80668566 MsG0880046986.01.T01:exon 20.0%
!! TTATATATAGTAGTATGGTT+AGG - Chr8:80664525-80664544 None:intergenic 20.0%
!!! AAGTTGATCAAATTTATGTA+GGG + Chr8:80667890-80667909 MsG0880046986.01.T01:intron 20.0%
!!! AATGATGTGATATTTTGATT+TGG + Chr8:80665833-80665852 MsG0880046986.01.T01:intron 20.0%
!!! AATTTTAATTTTACCTCAAG+AGG - Chr8:80667659-80667678 None:intergenic 20.0%
!!! AATTTTTGAATGATTGATTC+AGG + Chr8:80665111-80665130 MsG0880046986.01.T01:intron 20.0%
!!! GCATAAATTTTTCAAAATGT+TGG - Chr8:80667219-80667238 None:intergenic 20.0%
!!! GTATAACTTTTTTCATATGA+TGG - Chr8:80666991-80667010 None:intergenic 20.0%
!!! TAAGTTGATCAAATTTATGT+AGG + Chr8:80667889-80667908 MsG0880046986.01.T01:intron 20.0%
!!! TTCTGATATTTTAACAGATT+GGG + Chr8:80668007-80668026 MsG0880046986.01.T01:intron 20.0%
!!! TTTAAGACAAATGATTTTTC+AGG + Chr8:80665740-80665759 MsG0880046986.01.T01:intron 20.0%
!!! TTTTGATTTGGATTTAACTT+TGG + Chr8:80665845-80665864 MsG0880046986.01.T01:intron 20.0%
! AACAAACTCAAGAAAAAGAT+TGG + Chr8:80664801-80664820 MsG0880046986.01.T01:CDS 25.0%
! AACATGTCAACAATTGATAT+GGG + Chr8:80664060-80664079 MsG0880046986.01.T01:intron 25.0%
! ACTTTAGCCATTAGATTAAT+GGG - Chr8:80664453-80664472 None:intergenic 25.0%
! AGTAAAATGGATCTGAAAAT+GGG - Chr8:80663826-80663845 None:intergenic 25.0%
! ATAAAACTTCACGATAAATG+AGG - Chr8:80667857-80667876 None:intergenic 25.0%
! ATAAAATTCTTACTGGTAGA+AGG + Chr8:80665404-80665423 MsG0880046986.01.T01:CDS 25.0%
! ATATTAACCAACACAAACAA+AGG + Chr8:80664563-80664582 MsG0880046986.01.T01:five_prime_UTR 25.0%
! ATTAAAAAATTGGGAGAAGA+TGG - Chr8:80664287-80664306 None:intergenic 25.0%
! CTCAACTTTCTCTTATATAT+AGG - Chr8:80664971-80664990 None:intergenic 25.0%
! GTCATAAGAAAAATACAAAG+GGG + Chr8:80668548-80668567 MsG0880046986.01.T01:exon 25.0%
! GTGTTCTCAAATTAATCTAA+TGG - Chr8:80663586-80663605 None:intergenic 25.0%
! TAAAATTCTTACTGGTAGAA+GGG + Chr8:80665405-80665424 MsG0880046986.01.T01:CDS 25.0%
! TACTTTAGCCATTAGATTAA+TGG - Chr8:80664454-80664473 None:intergenic 25.0%
! TAGAAATAATCTAGTGTTGT+AGG - Chr8:80663623-80663642 None:intergenic 25.0%
! TATCTAAACCGAAATTTGAA+CGG + Chr8:80668923-80668942 MsG0880046986.01.T01:three_prime_UTR 25.0%
! TATTAATTGATCATGTGTCT+TGG - Chr8:80667115-80667134 None:intergenic 25.0%
! TCATTCATTCATTTCAGAAA+TGG + Chr8:80663760-80663779 MsG0880046986.01.T01:intron 25.0%
! TTAAAAAATTGGGAGAAGAT+GGG - Chr8:80664286-80664305 None:intergenic 25.0%
!! AATTGTTATTGCAGAAAAGA+TGG + Chr8:80664219-80664238 MsG0880046986.01.T01:intron 25.0%
!! ATTGTTATTGCAGAAAAGAT+GGG + Chr8:80664220-80664239 MsG0880046986.01.T01:intron 25.0%
!! GTATGATATCTATACTTTTG+AGG + Chr8:80667012-80667031 MsG0880046986.01.T01:intron 25.0%
!! TACCAGTAAGAATTTTATGA+GGG - Chr8:80665402-80665421 None:intergenic 25.0%
!! TCTAAAATGACAGAGTAAAA+TGG - Chr8:80663689-80663708 None:intergenic 25.0%
!! TCTTTTAGATGGAAATTTGA+AGG + Chr8:80668287-80668306 MsG0880046986.01.T01:CDS 25.0%
!! TTTGTGTTTGTTGAAGATAA+TGG + Chr8:80663928-80663947 MsG0880046986.01.T01:intron 25.0%
!! TTTTATTGATACCAAGTACA+GGG + Chr8:80667822-80667841 MsG0880046986.01.T01:intron 25.0%
!!! AAAGTCTTAACTTTTTCTTG+CGG + Chr8:80668874-80668893 MsG0880046986.01.T01:three_prime_UTR 25.0%
!!! ATATTTTAACAGATTGGGAA+AGG + Chr8:80668012-80668031 MsG0880046986.01.T01:intron 25.0%
!!! ATGTTGTTTCTTAATGTCAT+TGG + Chr8:80665075-80665094 MsG0880046986.01.T01:intron 25.0%
!!! CGTGAAGTTTTATAAAAGTA+GGG + Chr8:80667864-80667883 MsG0880046986.01.T01:intron 25.0%
!!! GTTCTGATATTTTAACAGAT+TGG + Chr8:80668006-80668025 MsG0880046986.01.T01:intron 25.0%
!!! TATGTTTTCTATGTTTGTTG+AGG + Chr8:80665306-80665325 MsG0880046986.01.T01:intron 25.0%
!!! TCGTGAAGTTTTATAAAAGT+AGG + Chr8:80667863-80667882 MsG0880046986.01.T01:intron 25.0%
AAAATGACAGAGTAAAATGG+TGG - Chr8:80663686-80663705 None:intergenic 30.0%
AAAGGAAACAGCAGTTAAAA+CGG + Chr8:80664148-80664167 MsG0880046986.01.T01:intron 30.0%
AAAGGTAGGATACTAATTGA+AGG + Chr8:80668030-80668049 MsG0880046986.01.T01:CDS 30.0%
ACGTGAAAATTGAGCAAAAA+GGG + Chr8:80663896-80663915 MsG0880046986.01.T01:intron 30.0%
ATACTCATCATTCTTGCAAA+GGG + Chr8:80666934-80666953 MsG0880046986.01.T01:CDS 30.0%
ATATTGCACAAAAAGGCTTA+AGG - Chr8:80666916-80666935 None:intergenic 30.0%
ATCACATCATTGAACTAGAA+AGG - Chr8:80665824-80665843 None:intergenic 30.0%
ATGTTGTATCGTGTATATTG+AGG - Chr8:80668590-80668609 None:intergenic 30.0%
ATTCAATATGCTTCTAGTGA+TGG - Chr8:80666550-80666569 None:intergenic 30.0%
CTTTCTCTTATATATAGGTC+CGG - Chr8:80664966-80664985 None:intergenic 30.0%
GAACATGTCAACAATTGATA+TGG + Chr8:80664059-80664078 MsG0880046986.01.T01:intron 30.0%
GACTGGAGAATTGAAATTAT+GGG - Chr8:80663437-80663456 None:intergenic 30.0%
GAGAATTGAAATTATGGGTT+GGG - Chr8:80663432-80663451 None:intergenic 30.0%
GAGTAAAATGGATCTGAAAA+TGG - Chr8:80663827-80663846 None:intergenic 30.0%
GATAATATCTTTGTCAGCTT+TGG - Chr8:80666762-80666781 None:intergenic 30.0%
GATCCATAACAAACAGAAAA+TGG - Chr8:80664656-80664675 None:intergenic 30.0%
GATGAGTATATTGCACAAAA+AGG - Chr8:80666923-80666942 None:intergenic 30.0%
GCAATGATTTCGATTAAATG+AGG - Chr8:80667300-80667319 None:intergenic 30.0%
GTCAAAACTACTAATAGTAC+CGG + Chr8:80666413-80666432 MsG0880046986.01.T01:CDS 30.0%
TAAATAAATCTTCCCATGGT+GGG - Chr8:80663561-80663580 None:intergenic 30.0%
TAATTCTTCTCTCTACTATC+TGG + Chr8:80665546-80665565 MsG0880046986.01.T01:intron 30.0%
TACCCTCATAAAATTCTTAC+TGG + Chr8:80665397-80665416 MsG0880046986.01.T01:CDS 30.0%
TAGTTAATAGTGTCAAGTAG+TGG - Chr8:80664885-80664904 None:intergenic 30.0%
TATACTCATCATTCTTGCAA+AGG + Chr8:80666933-80666952 MsG0880046986.01.T01:CDS 30.0%
TATATAGTAGTATGGTTAGG+TGG - Chr8:80664522-80664541 None:intergenic 30.0%
TGTTGTATCGTGTATATTGA+GGG - Chr8:80668589-80668608 None:intergenic 30.0%
TTAAATAAATCTTCCCATGG+TGG - Chr8:80663562-80663581 None:intergenic 30.0%
TTATCATAGACTTCCATTAC+TGG - Chr8:80664419-80664438 None:intergenic 30.0%
TTGTATTGAACCAATAGGAA+TGG + Chr8:80665871-80665890 MsG0880046986.01.T01:intron 30.0%
TTGTCAAATAGTTGCATGTA+TGG + Chr8:80668687-80668706 MsG0880046986.01.T01:three_prime_UTR 30.0%
! AAAAGATTGCTAATTTGCAG+AGG + Chr8:80668960-80668979 MsG0880046986.01.T01:three_prime_UTR 30.0%
! AATGATGTAGTTGCTGTTAT+TGG + Chr8:80665923-80665942 MsG0880046986.01.T01:CDS 30.0%
! AGAGATTTTTCATGTGGATT+GGG - Chr8:80664908-80664927 None:intergenic 30.0%
! ATATCCTCTTGGAGAATTTT+AGG + Chr8:80667695-80667714 MsG0880046986.01.T01:intron 30.0%
! ATTTTCAGTGTTTCAAGAAC+TGG + Chr8:80665172-80665191 MsG0880046986.01.T01:CDS 30.0%
! CTACCAGTAAGAATTTTATG+AGG - Chr8:80665403-80665422 None:intergenic 30.0%
! CTTTTATTGATACCAAGTAC+AGG + Chr8:80667821-80667840 MsG0880046986.01.T01:intron 30.0%
! GAGAGTGAATATGATTCTTT+TGG + Chr8:80665484-80665503 MsG0880046986.01.T01:CDS 30.0%
! TGAAGTTTGAAATCAAGTAC+AGG + Chr8:80667264-80667283 MsG0880046986.01.T01:intron 30.0%
! TTGTTGACATGTTCTTTTTC+TGG - Chr8:80664053-80664072 None:intergenic 30.0%
! TTTTCAGTGTTTCAAGAACT+GGG + Chr8:80665173-80665192 MsG0880046986.01.T01:CDS 30.0%
!! AAGTCTTAACTTTTTCTTGC+GGG + Chr8:80668875-80668894 MsG0880046986.01.T01:three_prime_UTR 30.0%
!! ATCTGAAATTGATTTTGAGG+TGG - Chr8:80663853-80663872 None:intergenic 30.0%
!! CTATGTTTTTAATACACCTC+AGG + Chr8:80665246-80665265 MsG0880046986.01.T01:CDS 30.0%
!! CTTCCATTTTCTGTTTGTTA+TGG + Chr8:80664650-80664669 MsG0880046986.01.T01:exon 30.0%
!! TGGATCTGAAATTGATTTTG+AGG - Chr8:80663856-80663875 None:intergenic 30.0%
!! TGTTTGTTGAAGATAATGGA+TGG + Chr8:80663932-80663951 MsG0880046986.01.T01:intron 30.0%
!! TTTTCTATGTTTGTTGAGGA+TGG + Chr8:80665310-80665329 MsG0880046986.01.T01:intron 30.0%
!!! AGTTTTGACTTCTTTGAGAA+TGG - Chr8:80666402-80666421 None:intergenic 30.0%
!!! GCAATTTTTTTTCCAACTAC+GGG - Chr8:80664031-80664050 None:intergenic 30.0%
!!! GGCAATTTTTTTTCCAACTA+CGG - Chr8:80664032-80664051 None:intergenic 30.0%
!!! TATACTTTTGAGGTATGCTT+GGG + Chr8:80667022-80667041 MsG0880046986.01.T01:intron 30.0%
!!! TCAAAGCATGAGTTTTGAAT+TGG - Chr8:80668365-80668384 None:intergenic 30.0%
!!! TCTGAAATTGATTTTGAGGT+GGG - Chr8:80663852-80663871 None:intergenic 30.0%
!!! TTCTTTTGACGTCACTTTTA+TGG + Chr8:80667475-80667494 MsG0880046986.01.T01:CDS 30.0%
AAAGTAAACTTTCCCATGGT+GGG + Chr8:80664468-80664487 MsG0880046986.01.T01:intron 35.0%
AAGAAGAAGCTTCAAATGGA+TGG - Chr8:80666198-80666217 None:intergenic 35.0%
AAGCGATACCGTTCAAATTT+CGG - Chr8:80668934-80668953 None:intergenic 35.0%
AATCAATTTCAGATCCAGAG+AGG + Chr8:80663859-80663878 MsG0880046986.01.T01:intron 35.0%
ACACTATGCACCTATTCAAA+TGG + Chr8:80664251-80664270 MsG0880046986.01.T01:intron 35.0%
ACGTCTTCAAAATGAAGTGT+CGG - Chr8:80665591-80665610 None:intergenic 35.0%
AGCCATTTGTCATAACTCAT+AGG - Chr8:80667976-80667995 None:intergenic 35.0%
AGTTCAACTACTATTTCAGC+TGG + Chr8:80665517-80665536 MsG0880046986.01.T01:CDS 35.0%
ATACCATGAGACAGACTAAT+GGG + Chr8:80665437-80665456 MsG0880046986.01.T01:CDS 35.0%
ATCAATTTCAGATCCAGAGA+GGG + Chr8:80663860-80663879 MsG0880046986.01.T01:intron 35.0%
ATCCATGTTATCACCGAAAA+AGG + Chr8:80666446-80666465 MsG0880046986.01.T01:CDS 35.0%
ATTACCATGATACTTGTCAG+CGG - Chr8:80666498-80666517 None:intergenic 35.0%
ATTGAGCAAAAAGGGTTTGT+TGG + Chr8:80663904-80663923 MsG0880046986.01.T01:intron 35.0%
CGGTTTAGATAACAGAAATG+CGG - Chr8:80668914-80668933 None:intergenic 35.0%
GACGTGAAAATTGAGCAAAA+AGG + Chr8:80663895-80663914 MsG0880046986.01.T01:intron 35.0%
GATTTATGAGTGTAGTACCT+TGG - Chr8:80664934-80664953 None:intergenic 35.0%
GGACTGGAGAATTGAAATTA+TGG - Chr8:80663438-80663457 None:intergenic 35.0%
GGAGAATTGAAATTATGGGT+TGG - Chr8:80663433-80663452 None:intergenic 35.0%
GGCAATTGTATTGAACCAAT+AGG + Chr8:80665866-80665885 MsG0880046986.01.T01:intron 35.0%
GGCTTAAATAAATCTTCCCA+TGG - Chr8:80663565-80663584 None:intergenic 35.0%
GTCCTATGAGTTATGACAAA+TGG + Chr8:80667971-80667990 MsG0880046986.01.T01:intron 35.0%
GTGATAACATGGATCAATAC+AGG - Chr8:80666440-80666459 None:intergenic 35.0%
GTGATCCATGGTCAATATAT+CGG - Chr8:80668431-80668450 None:intergenic 35.0%
GTGTTCTCCCATTAATCTAA+TGG + Chr8:80664443-80664462 MsG0880046986.01.T01:intron 35.0%
GTTGTATCGTGTATATTGAG+GGG - Chr8:80668588-80668607 None:intergenic 35.0%
TAAAGTAAACTTTCCCATGG+TGG + Chr8:80664467-80664486 MsG0880046986.01.T01:intron 35.0%
TAGAAAACATAACACCAACC+TGG - Chr8:80665297-80665316 None:intergenic 35.0%
TAGGGAGTAACAAAACGAAT+TGG + Chr8:80666236-80666255 MsG0880046986.01.T01:intron 35.0%
TATGAAGCTATGAACAATGC+TGG + Chr8:80665974-80665993 MsG0880046986.01.T01:CDS 35.0%
TATGCCTAAAATTCTCCAAG+AGG - Chr8:80667702-80667721 None:intergenic 35.0%
TCAAAAGAACCACAATGTGT+AGG - Chr8:80667464-80667483 None:intergenic 35.0%
TCAACAAAAGTCGATGTATC+TGG - Chr8:80665021-80665040 None:intergenic 35.0%
TCATAATAACCATACGGTGA+AGG + Chr8:80663510-80663529 MsG0880046986.01.T01:intron 35.0%
TCCAAGAGGATATGTATGTA+TGG - Chr8:80667688-80667707 None:intergenic 35.0%
TCCAATTGATCCTTCTTCTA+CGG - Chr8:80668226-80668245 None:intergenic 35.0%
TCCATACATACATATCCTCT+TGG + Chr8:80667684-80667703 MsG0880046986.01.T01:intron 35.0%
TCCATCTAAAAGACCATCAA+GGG - Chr8:80668280-80668299 None:intergenic 35.0%
TCGGAACTTCAGCAAAATTA+TGG - Chr8:80668743-80668762 None:intergenic 35.0%
TCTATGTTATGACCATCAAC+AGG - Chr8:80666368-80666387 None:intergenic 35.0%
TGATTACCACTAAAGCTTCA+AGG + Chr8:80664085-80664104 MsG0880046986.01.T01:intron 35.0%
TGGAAAGCAATTCAAAGCAA+CGG + Chr8:80666685-80666704 MsG0880046986.01.T01:CDS 35.0%
TGTCAAGAAGAAGCTTCAAA+TGG - Chr8:80666202-80666221 None:intergenic 35.0%
TTACACAACATACTTTGCAG+AGG + Chr8:80666721-80666740 MsG0880046986.01.T01:CDS 35.0%
TTAGTATTATAGTGCACGTG+TGG - Chr8:80668817-80668836 None:intergenic 35.0%
TTCCATCTAAAAGACCATCA+AGG - Chr8:80668281-80668300 None:intergenic 35.0%
TTCTTCTTCTCACTCTCAAT+GGG + Chr8:80664746-80664765 MsG0880046986.01.T01:CDS 35.0%
TTTAACAGATTGGGAAAGGT+AGG + Chr8:80668016-80668035 MsG0880046986.01.T01:intron 35.0%
TTTACATGACAACTATGCAG+TGG + Chr8:80668385-80668404 MsG0880046986.01.T01:intron 35.0%
TTTCAGTGTTTCAAGAACTG+GGG + Chr8:80665174-80665193 MsG0880046986.01.T01:CDS 35.0%
! ACAACAACCTTTGTTTGTGT+TGG - Chr8:80664573-80664592 None:intergenic 35.0%
! AGAGAAGTTGTTATTCTACC+TGG - Chr8:80666967-80666986 None:intergenic 35.0%
! GAATATGATTCTTTTGGCAC+TGG + Chr8:80665490-80665509 MsG0880046986.01.T01:CDS 35.0%
! GAGAGATTTTTCATGTGGAT+TGG - Chr8:80664909-80664928 None:intergenic 35.0%
! GGACATTTAGGTTCAAGTTT+AGG + Chr8:80665196-80665215 MsG0880046986.01.T01:CDS 35.0%
! TCACAAGGTGTTACAAAAGA+AGG - Chr8:80664696-80664715 None:intergenic 35.0%
! TTGAGCAAAAAGGGTTTGTT+GGG + Chr8:80663905-80663924 MsG0880046986.01.T01:intron 35.0%
! TTGTTATTCTACCTGGTCAT+AGG - Chr8:80666960-80666979 None:intergenic 35.0%
!! GCAAAATTATGGTGTCATTG+AGG - Chr8:80668732-80668751 None:intergenic 35.0%
!! TCAACACTTTTTGAAGAGCT+TGG + Chr8:80666326-80666345 MsG0880046986.01.T01:CDS 35.0%
!! TGTTGAAGATAATGGATGGT+CGG + Chr8:80663936-80663955 MsG0880046986.01.T01:intron 35.0%
!!! CTATACTTTTGAGGTATGCT+TGG + Chr8:80667021-80667040 MsG0880046986.01.T01:intron 35.0%
AACATGGATCAATACAGGAC+CGG - Chr8:80666435-80666454 None:intergenic 40.0%
AACCAACTCACATATCTGTG+AGG - Chr8:80666629-80666648 None:intergenic 40.0%
AACCAATAGGAATGGCTGTT+GGG + Chr8:80665879-80665898 MsG0880046986.01.T01:intron 40.0%
AAGAGGAATGCCTTTGTACT+CGG - Chr8:80667642-80667661 None:intergenic 40.0%
ACAGAGTAAAATGGTGGTTG+TGG - Chr8:80663680-80663699 None:intergenic 40.0%
ACCGTAGAAGAAGGATCAAT+TGG + Chr8:80668222-80668241 MsG0880046986.01.T01:CDS 40.0%
ACCTCAGGATAAGATTCTGT+GGG + Chr8:80665261-80665280 MsG0880046986.01.T01:CDS 40.0%
ACCTCTCTCAATTCTCTAAG+AGG - Chr8:80666133-80666152 None:intergenic 40.0%
ACCTCTTAGAGAATTGAGAG+AGG + Chr8:80666129-80666148 MsG0880046986.01.T01:CDS 40.0%
ACTACTATTTCAGCTGGACT+TGG + Chr8:80665523-80665542 MsG0880046986.01.T01:CDS 40.0%
AGAATTGAGAGAGGTTGCAA+AGG + Chr8:80666138-80666157 MsG0880046986.01.T01:CDS 40.0%
AGTAAAATGGTGGTTGTGGA+GGG - Chr8:80663676-80663695 None:intergenic 40.0%
ATTGGTTAAGAAGGAGACGT+GGG - Chr8:80663477-80663496 None:intergenic 40.0%
CAAGCCATGTTGTTCAACTA+AGG - Chr8:80668115-80668134 None:intergenic 40.0%
CATACCATGAGACAGACTAA+TGG + Chr8:80665436-80665455 MsG0880046986.01.T01:CDS 40.0%
CATACTTGGACAAACAAGAG+AGG + Chr8:80668512-80668531 MsG0880046986.01.T01:CDS 40.0%
CATGAAAAATCTCTCCACCA+AGG + Chr8:80664914-80664933 MsG0880046986.01.T01:CDS 40.0%
CTATGCACCTATTCAAATGG+TGG + Chr8:80664254-80664273 MsG0880046986.01.T01:intron 40.0%
CTCATAAATCATACTCGCTC+CGG + Chr8:80664944-80664963 MsG0880046986.01.T01:intron 40.0%
CTTCTTCTTCTCACTCTCAA+TGG + Chr8:80664745-80664764 MsG0880046986.01.T01:CDS 40.0%
GAAGGATCAATTGGAGGATT+TGG + Chr8:80668231-80668250 MsG0880046986.01.T01:CDS 40.0%
GAATTTCATGTCCATACCAC+AGG + Chr8:80667361-80667380 MsG0880046986.01.T01:intron 40.0%
GAGCTTGGACTCTACTATAT+CGG + Chr8:80666341-80666360 MsG0880046986.01.T01:CDS 40.0%
GAGTGAGAAGAAGAAGAAGA+AGG - Chr8:80664741-80664760 None:intergenic 40.0%
GATAAGATTCTGTGGGATGT+TGG + Chr8:80665268-80665287 MsG0880046986.01.T01:CDS 40.0%
GCAACAGTGTTCAACATACT+TGG + Chr8:80668498-80668517 MsG0880046986.01.T01:CDS 40.0%
GCTGACAAGTATCATGGTAA+TGG + Chr8:80666497-80666516 MsG0880046986.01.T01:intron 40.0%
GCTTCCTTAGTTGAACAACA+TGG + Chr8:80668108-80668127 MsG0880046986.01.T01:CDS 40.0%
GGAGTAACAAAACGAATTGG+AGG + Chr8:80666239-80666258 MsG0880046986.01.T01:CDS 40.0%
GGCTAAAGTAAACTTTCCCA+TGG + Chr8:80664464-80664483 MsG0880046986.01.T01:intron 40.0%
GTAGAAGAAGGATCAATTGG+AGG + Chr8:80668225-80668244 MsG0880046986.01.T01:CDS 40.0%
GTATAAAACCTTCCCACCAT+GGG - Chr8:80664483-80664502 None:intergenic 40.0%
TAAGACCAGCCATTGACAAT+TGG - Chr8:80668461-80668480 None:intergenic 40.0%
TACACGTTGTTTGATGTTGC+TGG + Chr8:80664344-80664363 MsG0880046986.01.T01:intron 40.0%
TACTATATCGGTCCTGTTGA+TGG + Chr8:80666353-80666372 MsG0880046986.01.T01:CDS 40.0%
TAGACCTGCAGCAAATGTAA+CGG - Chr8:80666882-80666901 None:intergenic 40.0%
TCCATGGTCAATATATCGGT+CGG - Chr8:80668427-80668446 None:intergenic 40.0%
TCTTCTTCTCACTCTCAATG+GGG + Chr8:80664747-80664766 MsG0880046986.01.T01:CDS 40.0%
TTACCAACTGCTACTCTTGA+TGG + Chr8:80666049-80666068 MsG0880046986.01.T01:CDS 40.0%
TTATGAGTGTAGTACCTTGG+TGG - Chr8:80664931-80664950 None:intergenic 40.0%
TTCAGTGTTTCAAGAACTGG+GGG + Chr8:80665175-80665194 MsG0880046986.01.T01:CDS 40.0%
TTCCTCACAGATATGTGAGT+TGG + Chr8:80666624-80666643 MsG0880046986.01.T01:intron 40.0%
TTCTCATGTTGCTCAGTTCA+TGG + Chr8:80668254-80668273 MsG0880046986.01.T01:CDS 40.0%
TTGAATTGCTTTCCAGTTGG+TGG - Chr8:80666680-80666699 None:intergenic 40.0%
TTGAGGTGGGAAGAGTAAAA+TGG - Chr8:80663839-80663858 None:intergenic 40.0%
! ATAGTGTCAAGTAGTGGAGT+AGG - Chr8:80664879-80664898 None:intergenic 40.0%
! CAAAGCATCTTGTTGGGAAT+CGG - Chr8:80666835-80666854 None:intergenic 40.0%
! CAATTCTTTTTCTCCCTCTC+TGG - Chr8:80663876-80663895 None:intergenic 40.0%
! CTTTGAGTAGTGCTCTAAGT+AGG + Chr8:80666092-80666111 MsG0880046986.01.T01:CDS 40.0%
! GCTTTGAATTGCTTTCCAGT+TGG - Chr8:80666683-80666702 None:intergenic 40.0%
! GTAGTTGCTGTTATTGGTGA+TGG + Chr8:80665929-80665948 MsG0880046986.01.T01:CDS 40.0%
! TAACCCATTAGTCTGTCTCA+TGG - Chr8:80665443-80665462 None:intergenic 40.0%
! TATTGGTTAAGAAGGAGACG+TGG - Chr8:80663478-80663497 None:intergenic 40.0%
! TCATGCTTCACTTTCTGAGA+TGG + Chr8:80664830-80664849 MsG0880046986.01.T01:CDS 40.0%
! TGGTGGAGAGATTTTTCATG+TGG - Chr8:80664914-80664933 None:intergenic 40.0%
!! ACAAACAAGAGAGGCATTAG+AGG + Chr8:80668521-80668540 MsG0880046986.01.T01:CDS 40.0%
!! AGACAGACTAATGGGTTATC+TGG + Chr8:80665445-80665464 MsG0880046986.01.T01:CDS 40.0%
!! AGGAAGAAGAAGTGTTCTTC+TGG - Chr8:80664721-80664740 None:intergenic 40.0%
!! CATGCTTCACTTTCTGAGAT+GGG + Chr8:80664831-80664850 MsG0880046986.01.T01:CDS 40.0%
!! GGAAGAAGAAGTGTTCTTCT+GGG - Chr8:80664720-80664739 None:intergenic 40.0%
!!! GGATTTTTAGTCCCTGTACT+TGG - Chr8:80667836-80667855 None:intergenic 40.0%
!!! GTGAGTTGGTTTGATTTTCC+AGG + Chr8:80666638-80666657 MsG0880046986.01.T01:intron 40.0%
AAAGCTCCTACAGGTGGTAT+AGG - Chr8:80666076-80666095 None:intergenic 45.0%
AAAGTTGACGAGTATGCTCG+TGG + Chr8:80666284-80666303 MsG0880046986.01.T01:CDS 45.0%
AAGAGGAAAGAGAGAGAAGG+TGG + Chr8:80664372-80664391 MsG0880046986.01.T01:intron 45.0%
ACATGACAACTATGCAGTGG+AGG + Chr8:80668388-80668407 MsG0880046986.01.T01:intron 45.0%
ACCAAGTTTGATCCACCAAC+TGG + Chr8:80666665-80666684 MsG0880046986.01.T01:CDS 45.0%
ACCTGCTGACCAATTGTCAA+TGG + Chr8:80668449-80668468 MsG0880046986.01.T01:CDS 45.0%
ACGTTGTTTGATGTTGCTGG+TGG + Chr8:80664347-80664366 MsG0880046986.01.T01:intron 45.0%
ACTGTTGCTGCTATGTGAGA+GGG - Chr8:80668486-80668505 None:intergenic 45.0%
AGGAGAAAGAGTAGCCCTAT+TGG + Chr8:80668050-80668069 MsG0880046986.01.T01:CDS 45.0%
ATCGCAATACATGCTGCGAT+GGG + Chr8:80666779-80666798 MsG0880046986.01.T01:CDS 45.0%
CAAAGCTCTGCTTCATCAGA+AGG - Chr8:80667530-80667549 None:intergenic 45.0%
CAACAAGATGCTTTGACGTG+GGG + Chr8:80666840-80666859 MsG0880046986.01.T01:CDS 45.0%
CACCTCAGGATAAGATTCTG+TGG + Chr8:80665260-80665279 MsG0880046986.01.T01:CDS 45.0%
CAGTCTGGCAAAATCACATG+AGG + Chr8:80668191-80668210 MsG0880046986.01.T01:CDS 45.0%
CATACGGTGAAGGATCACAT+GGG + Chr8:80663520-80663539 MsG0880046986.01.T01:intron 45.0%
CCAACAAGATGCTTTGACGT+GGG + Chr8:80666839-80666858 MsG0880046986.01.T01:CDS 45.0%
CCATGGTCAATATATCGGTC+GGG - Chr8:80668426-80668445 None:intergenic 45.0%
CGAATCAAGGATCGATCCAA+TGG - Chr8:80668171-80668190 None:intergenic 45.0%
GAACCAATAGGAATGGCTGT+TGG + Chr8:80665878-80665897 MsG0880046986.01.T01:intron 45.0%
GAGTAAAATGGTGGTTGTGG+AGG - Chr8:80663677-80663696 None:intergenic 45.0%
GATCGAGCCACCATTTGAAT+AGG - Chr8:80664264-80664283 None:intergenic 45.0%
GGAGAAAGAGTAGCCCTATT+GGG + Chr8:80668051-80668070 MsG0880046986.01.T01:CDS 45.0%
GGTATAAAACCTTCCCACCA+TGG - Chr8:80664484-80664503 None:intergenic 45.0%
GGTTAGGTGGCATTTCACAT+GGG - Chr8:80664509-80664528 None:intergenic 45.0%
GTAAAATGGTGGTTGTGGAG+GGG - Chr8:80663675-80663694 None:intergenic 45.0%
GTGAAGAGGAAAGAGAGAGA+AGG + Chr8:80664369-80664388 MsG0880046986.01.T01:intron 45.0%
GTTCTGATCACCGTAGAAGA+AGG + Chr8:80668213-80668232 MsG0880046986.01.T01:CDS 45.0%
TATCGCAATACATGCTGCGA+TGG + Chr8:80666778-80666797 MsG0880046986.01.T01:CDS 45.0%
TATGCTCGTGGTATGATCAG+TGG + Chr8:80666296-80666315 MsG0880046986.01.T01:CDS 45.0%
TCAAGAACTGGGGGACATTT+AGG + Chr8:80665184-80665203 MsG0880046986.01.T01:CDS 45.0%
TCAGATGGTCCTACACATTG+TGG + Chr8:80667452-80667471 MsG0880046986.01.T01:CDS 45.0%
TCCCACAGAATCTTATCCTG+AGG - Chr8:80665265-80665284 None:intergenic 45.0%
TGATTGTGAACGAAGTGGAC+TGG - Chr8:80663454-80663473 None:intergenic 45.0%
TGGAGGTCCTATGCATGAAT+TGG + Chr8:80666256-80666275 MsG0880046986.01.T01:CDS 45.0%
TGGTTAGGTGGCATTTCACA+TGG - Chr8:80664510-80664529 None:intergenic 45.0%
TTCGCAGCCAATTCATGCAT+AGG - Chr8:80666266-80666285 None:intergenic 45.0%
TTTCATGTCCATACCACAGG+TGG + Chr8:80667364-80667383 MsG0880046986.01.T01:intron 45.0%
! AAATCTTCCCATGGTGGGAA+GGG - Chr8:80663556-80663575 None:intergenic 45.0%
! AACTAGATAACGGCTAACGC+AGG + Chr8:80668664-80668683 MsG0880046986.01.T01:three_prime_UTR 45.0%
! CCACGTCAAAGCATCTTGTT+GGG - Chr8:80666841-80666860 None:intergenic 45.0%
! GGAAAATGGATGGTGGTGAT+GGG + Chr8:80663992-80664011 MsG0880046986.01.T01:intron 45.0%
! GGATCAAACTTGGTAACTCC+TGG - Chr8:80666659-80666678 None:intergenic 45.0%
! GTTCAGCCTTGAAGCTTTAG+TGG - Chr8:80664094-80664113 None:intergenic 45.0%
! TAAACTTTCCCATGGTGGGA+AGG + Chr8:80664472-80664491 MsG0880046986.01.T01:intron 45.0%
! TAAATCTTCCCATGGTGGGA+AGG - Chr8:80663557-80663576 None:intergenic 45.0%
! TGAAGCAGAGCTTTGTCACA+TGG + Chr8:80667535-80667554 MsG0880046986.01.T01:CDS 45.0%
! TTTTGCCAGACTGCGAATCA+AGG - Chr8:80668184-80668203 None:intergenic 45.0%
!! AGTGTTCTTCTGGGATCACA+AGG - Chr8:80664711-80664730 None:intergenic 45.0%
!! ATGGACAGAGCTGGATTAGT+TGG + Chr8:80667428-80667447 MsG0880046986.01.T01:CDS 45.0%
!! GCCCTTGATGGTCTTTTAGA+TGG + Chr8:80668276-80668295 MsG0880046986.01.T01:CDS 45.0%
!! GCTGGATTAGTTGGATCAGA+TGG + Chr8:80667437-80667456 MsG0880046986.01.T01:CDS 45.0%
!! GTACAAAGGCATTCCTCTTG+AGG + Chr8:80667643-80667662 MsG0880046986.01.T01:CDS 45.0%
!! TCCAGTTGGTGGATCAAACT+TGG - Chr8:80666669-80666688 None:intergenic 45.0%
!! TGAAGATAATGGATGGTCGG+CGG + Chr8:80663939-80663958 MsG0880046986.01.T01:intron 45.0%
!!! ACTTTTGAGGTATGCTTGGG+TGG + Chr8:80667025-80667044 MsG0880046986.01.T01:intron 45.0%
!!! GGCCTTTTTCGGTGATAACA+TGG - Chr8:80666451-80666470 None:intergenic 45.0%
!! TATGATTATTATAATATTAT+TGG - Chr8:80663495-80663514 None:intergenic 5.0%
AGAGTAGCCCTATTGGGCTA+CGG + Chr8:80668057-80668076 MsG0880046986.01.T01:CDS 50.0%
AGGAAAGAGAGAGAAGGTGG+TGG + Chr8:80664375-80664394 MsG0880046986.01.T01:intron 50.0%
AGGTGGCATTTCACATGGGA+AGG - Chr8:80664505-80664524 None:intergenic 50.0%
ATCTTGTTGGGAATCGGCGA+TGG - Chr8:80666829-80666848 None:intergenic 50.0%
ATTGGTCAGCAGGTGATCCA+TGG - Chr8:80668443-80668462 None:intergenic 50.0%
CAAGCCGCTGACAAGTATCA+TGG + Chr8:80666491-80666510 MsG0880046986.01.T01:CDS 50.0%
CACTGTTGCTGCTATGTGAG+AGG - Chr8:80668487-80668506 None:intergenic 50.0%
CCATACGGTGAAGGATCACA+TGG + Chr8:80663519-80663538 MsG0880046986.01.T01:intron 50.0%
CCATGTGATCCTTCACCGTA+TGG - Chr8:80663522-80663541 None:intergenic 50.0%
CCCAACAAGATGCTTTGACG+TGG + Chr8:80666838-80666857 MsG0880046986.01.T01:CDS 50.0%
CCCGACCGATATATTGACCA+TGG + Chr8:80668423-80668442 MsG0880046986.01.T01:CDS 50.0%
CGTGGTATGATCAGTGGTAC+TGG + Chr8:80666302-80666321 MsG0880046986.01.T01:CDS 50.0%
CGTTCAGAACTGTTTGGCTG+CGG + Chr8:80668086-80668105 MsG0880046986.01.T01:CDS 50.0%
CTACTCAAAGCTCCTACAGG+TGG - Chr8:80666082-80666101 None:intergenic 50.0%
CTCCCAACAGCCATTCCTAT+TGG - Chr8:80665884-80665903 None:intergenic 50.0%
GAACTTCCAGCCGAGTACAA+AGG + Chr8:80667629-80667648 MsG0880046986.01.T01:CDS 50.0%
GATGGACCTATACCACCTGT+AGG + Chr8:80666067-80666086 MsG0880046986.01.T01:CDS 50.0%
GCACTACTCAAAGCTCCTAC+AGG - Chr8:80666085-80666104 None:intergenic 50.0%
GCCATTGACAATTGGTCAGC+AGG - Chr8:80668453-80668472 None:intergenic 50.0%
GCTGACCAATTGTCAATGGC+TGG + Chr8:80668453-80668472 MsG0880046986.01.T01:CDS 50.0%
GCTGTTGGGAGAGATCTGAA+GGG + Chr8:80665893-80665912 MsG0880046986.01.T01:CDS 50.0%
GGTCCATCAAGAGTAGCAGT+TGG - Chr8:80666055-80666074 None:intergenic 50.0%
GTACAATCCCTTCCCACCAT+GGG + Chr8:80663546-80663565 MsG0880046986.01.T01:intron 50.0%
GTCAGCCGTTCAGAACTGTT+TGG + Chr8:80668080-80668099 MsG0880046986.01.T01:CDS 50.0%
GTCAGTCTCAGTTTCGTGTC+TGG + Chr8:80665695-80665714 MsG0880046986.01.T01:intron 50.0%
GTCATGTACCACCTGTGGTA+TGG - Chr8:80667375-80667394 None:intergenic 50.0%
GTGGGTGATTGTGAACGAAG+TGG - Chr8:80663459-80663478 None:intergenic 50.0%
GTTATCACCGAAAAAGGCCG+CGG + Chr8:80666452-80666471 MsG0880046986.01.T01:CDS 50.0%
TCAGGAGCTGAAACAGCTTG+CGG + Chr8:80665129-80665148 MsG0880046986.01.T01:intron 50.0%
TGCACGTTTCTGCAAGCCAT+TGG + Chr8:80668152-80668171 MsG0880046986.01.T01:CDS 50.0%
TTGAGGTATGCTTGGGTGGA+GGG + Chr8:80667029-80667048 MsG0880046986.01.T01:intron 50.0%
! ACACCAATGCCATTTCCCCT+CGG - Chr8:80667608-80667627 None:intergenic 50.0%
! AGTTGTTTCCGATACCCGAG+GGG + Chr8:80667590-80667609 MsG0880046986.01.T01:CDS 50.0%
! CATGCCGTTACATTTGCTGC+AGG + Chr8:80666875-80666894 MsG0880046986.01.T01:CDS 50.0%
! CCCACGTCAAAGCATCTTGT+TGG - Chr8:80666842-80666861 None:intergenic 50.0%
! CTTGGGTGGAGGGTTTTTGA+GGG + Chr8:80667039-80667058 MsG0880046986.01.T01:intron 50.0%
! GAGTTGTTTCCGATACCCGA+GGG + Chr8:80667589-80667608 MsG0880046986.01.T01:CDS 50.0%
! GGGAAAATGGATGGTGGTGA+TGG + Chr8:80663991-80664010 MsG0880046986.01.T01:intron 50.0%
! GTGTCAAGTAGTGGAGTAGG+AGG - Chr8:80664876-80664895 None:intergenic 50.0%
! TCGATCCTTGATTCGCAGTC+TGG + Chr8:80668176-80668195 MsG0880046986.01.T01:CDS 50.0%
! TGATGTTGCTGGTGGTGAAG+AGG + Chr8:80664355-80664374 MsG0880046986.01.T01:intron 50.0%
! TGGATATCCGCGGCCTTTTT+CGG - Chr8:80666462-80666481 None:intergenic 50.0%
! TGGCTTGCAGAAACGTGCAT+CGG - Chr8:80668151-80668170 None:intergenic 50.0%
! TTTGAGGTATGCTTGGGTGG+AGG + Chr8:80667028-80667047 MsG0880046986.01.T01:intron 50.0%
!! AAGAGAGAGAAGGTGGTGGA+AGG + Chr8:80664379-80664398 MsG0880046986.01.T01:intron 50.0%
!! CGCAGCCAAACAGTTCTGAA+CGG - Chr8:80668088-80668107 None:intergenic 50.0%
!! CTCGGGTATCGGAAACAACT+CGG - Chr8:80667590-80667609 None:intergenic 50.0%
!! TGGTGATGGTGCTATGACAG+CGG + Chr8:80665943-80665962 MsG0880046986.01.T01:CDS 50.0%
AAATGGTGGTTGTGGAGGGG+AGG - Chr8:80663672-80663691 None:intergenic 55.0%
ACAAACAGCGGACCCGTAGT+TGG + Chr8:80664016-80664035 MsG0880046986.01.T01:intron 55.0%
ACAACTCGGTCGATCGTCGA+TGG - Chr8:80667576-80667595 None:intergenic 55.0%
ACCACAGGTGGTACATGACG+TGG + Chr8:80667376-80667395 MsG0880046986.01.T01:intron 55.0%
AGGAGCCATCACCACCATGT+TGG - Chr8:80667510-80667529 None:intergenic 55.0%
ATACATGCTGCGATGGGAGG+TGG + Chr8:80666785-80666804 MsG0880046986.01.T01:CDS 55.0%
CGGTGAAGGATCACATGGGA+AGG + Chr8:80663524-80663543 MsG0880046986.01.T01:intron 55.0%
CTTGCAAAGGGCCTATGACC+AGG + Chr8:80666946-80666965 MsG0880046986.01.T01:CDS 55.0%
GACAACTATGCAGTGGAGGC+CGG + Chr8:80668392-80668411 MsG0880046986.01.T01:intron 55.0%
GAGCCATCACCACCATGTTG+GGG - Chr8:80667508-80667527 None:intergenic 55.0%
GAGTAGCCCTATTGGGCTAC+GGG + Chr8:80668058-80668077 MsG0880046986.01.T01:CDS 55.0%
GCAATACATGCTGCGATGGG+AGG + Chr8:80666782-80666801 MsG0880046986.01.T01:CDS 55.0%
GCTCAGTTCATGGCCCTTGA+TGG + Chr8:80668264-80668283 MsG0880046986.01.T01:CDS 55.0%
GCTCTGCGTATGGATATCCG+CGG - Chr8:80666472-80666491 None:intergenic 55.0%
GGAATGCCTTTGTACTCGGC+TGG - Chr8:80667638-80667657 None:intergenic 55.0%
GGAGCCATCACCACCATGTT+GGG - Chr8:80667509-80667528 None:intergenic 55.0%
GGCTGTTGGGAGAGATCTGA+AGG + Chr8:80665892-80665911 MsG0880046986.01.T01:CDS 55.0%
GGTACAATCCCTTCCCACCA+TGG + Chr8:80663545-80663564 MsG0880046986.01.T01:intron 55.0%
TACCCGAGGGGAAATGGCAT+TGG + Chr8:80667602-80667621 MsG0880046986.01.T01:CDS 55.0%
TATCGGTCGGGAAGAACCAC+CGG - Chr8:80668414-80668433 None:intergenic 55.0%
TATGGCATGCCTCCCCAACA+TGG + Chr8:80667493-80667512 MsG0880046986.01.T01:CDS 55.0%
TCCACGTCATGTACCACCTG+TGG - Chr8:80667380-80667399 None:intergenic 55.0%
TCTGTGGGATGTTGGTCACC+AGG + Chr8:80665276-80665295 MsG0880046986.01.T01:CDS 55.0%
TGGGATGTTGGTCACCAGGT+TGG + Chr8:80665280-80665299 MsG0880046986.01.T01:intron 55.0%
TTCCGATACCCGAGGGGAAA+TGG + Chr8:80667596-80667615 MsG0880046986.01.T01:CDS 55.0%
! CACCAATGCCATTTCCCCTC+GGG - Chr8:80667607-80667626 None:intergenic 55.0%
! CGAGTTGTTTCCGATACCCG+AGG + Chr8:80667588-80667607 MsG0880046986.01.T01:CDS 55.0%
! GCTGCAGGTCTAGCTTGTGA+AGG + Chr8:80666890-80666909 MsG0880046986.01.T01:CDS 55.0%
! GCTTGGGTGGAGGGTTTTTG+AGG + Chr8:80667038-80667057 MsG0880046986.01.T01:intron 55.0%
! TGCCATTTCCCCTCGGGTAT+CGG - Chr8:80667601-80667620 None:intergenic 55.0%
!! AAGGAGAGAGGGTGGTGGAA+GGG - Chr8:80663649-80663668 None:intergenic 55.0%
!! GGTGATGGTGCTATGACAGC+GGG + Chr8:80665944-80665963 MsG0880046986.01.T01:CDS 55.0%
!! GTGGTGATGGGCACAAACAG+CGG + Chr8:80664004-80664023 MsG0880046986.01.T01:intron 55.0%
AACTATGCAGTGGAGGCCGG+TGG + Chr8:80668395-80668414 MsG0880046986.01.T01:intron 60.0%
ATCGTCGATGGCTGCTGCAG+TGG - Chr8:80667564-80667583 None:intergenic 60.0%
CCATCACCACCATGTTGGGG+AGG - Chr8:80667505-80667524 None:intergenic 60.0%
GGCTGACCCGTAGCCCAATA+GGG - Chr8:80668067-80668086 None:intergenic 60.0%
TGGAGGGGAGGAAGGAGAGA+GGG - Chr8:80663660-80663679 None:intergenic 60.0%
! CCTCCCCAACATGGTGGTGA+TGG + Chr8:80667502-80667521 MsG0880046986.01.T01:CDS 60.0%
! TCAGCGGCTTGCTCTGCGTA+TGG - Chr8:80666482-80666501 None:intergenic 60.0%
!! GAAGGAGAGAGGGTGGTGGA+AGG - Chr8:80663650-80663669 None:intergenic 60.0%
AGGGGAGGAAGGAGAGAGGG+TGG - Chr8:80663657-80663676 None:intergenic 65.0%
CGGCTGACCCGTAGCCCAAT+AGG - Chr8:80668068-80668087 None:intergenic 65.0%
GCAGGCGGCGGGAAAATGGA+TGG + Chr8:80663982-80664001 MsG0880046986.01.T01:intron 65.0%
GCTGCGATGGGAGGTGGAAC+TGG + Chr8:80666791-80666810 MsG0880046986.01.T01:CDS 65.0%
GGAGGAAGGAGAGAGGGTGG+TGG - Chr8:80663654-80663673 None:intergenic 65.0%
GGCATGCCTCCCCAACATGG+TGG + Chr8:80667496-80667515 MsG0880046986.01.T01:CDS 65.0%
GGCGGCGGGAAAATGGATGG+TGG + Chr8:80663985-80664004 MsG0880046986.01.T01:intron 65.0%
GGTGGTTGTGGAGGGGAGGA+AGG - Chr8:80663668-80663687 None:intergenic 65.0%
GTGGAGGGGAGGAAGGAGAG+AGG - Chr8:80663661-80663680 None:intergenic 65.0%
GTGTGCAGGCGGCGGGAAAA+TGG + Chr8:80663978-80663997 MsG0880046986.01.T01:intron 65.0%
AGTGGTCGGCGGTGTGCAGG+CGG + Chr8:80663967-80663986 MsG0880046986.01.T01:intron 70.0%
GGATGGTCGGCGGTGTGCAG+TGG + Chr8:80663949-80663968 MsG0880046986.01.T01:intron 70.0%
GGTCGGCGGTGTGCAGTGGT+CGG + Chr8:80663953-80663972 MsG0880046986.01.T01:intron 70.0%
TGCAGTGGTCGGCGGTGTGC+AGG + Chr8:80663964-80663983 MsG0880046986.01.T01:intron 70.0%
CGGCGGTGTGCAGTGGTCGG+CGG + Chr8:80663956-80663975 MsG0880046986.01.T01:intron 75.0%
! GGTCGGCGGTGTGCAGGCGG+CGG + Chr8:80663970-80663989 MsG0880046986.01.T01:intron 80.0%
! GTCGGCGGTGTGCAGGCGGC+GGG + Chr8:80663971-80663990 MsG0880046986.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 80663423 80668992 80663423 ID=MsG0880046986.01;Name=MsG0880046986.01
Chr8 mRNA 80663423 80668992 80663423 ID=MsG0880046986.01.T01;Parent=MsG0880046986.01;Name=MsG0880046986.01.T01;_AED=0.36;_eAED=0.36;_QI=239|1|1|1|0.88|0.8|10|438|717
Chr8 exon 80663423 80663525 80663423 ID=MsG0880046986.01.T01:exon:10371;Parent=MsG0880046986.01.T01
Chr8 exon 80664533 80664935 80664533 ID=MsG0880046986.01.T01:exon:10372;Parent=MsG0880046986.01.T01
Chr8 exon 80665133 80665297 80665133 ID=MsG0880046986.01.T01:exon:10373;Parent=MsG0880046986.01.T01
Chr8 exon 80665394 80665544 80665394 ID=MsG0880046986.01.T01:exon:10374;Parent=MsG0880046986.01.T01
Chr8 exon 80665888 80666159 80665888 ID=MsG0880046986.01.T01:exon:10375;Parent=MsG0880046986.01.T01
Chr8 exon 80666239 80666512 80666239 ID=MsG0880046986.01.T01:exon:10376;Parent=MsG0880046986.01.T01
Chr8 exon 80666660 80666967 80666660 ID=MsG0880046986.01.T01:exon:10377;Parent=MsG0880046986.01.T01
Chr8 exon 80667383 80667664 80667383 ID=MsG0880046986.01.T01:exon:10378;Parent=MsG0880046986.01.T01
Chr8 exon 80668024 80668308 80668024 ID=MsG0880046986.01.T01:exon:10379;Parent=MsG0880046986.01.T01
Chr8 exon 80668405 80668992 80668405 ID=MsG0880046986.01.T01:exon:10380;Parent=MsG0880046986.01.T01
Chr8 five_prime_UTR 80663423 80663525 80663423 ID=MsG0880046986.01.T01:five_prime_utr;Parent=MsG0880046986.01.T01
Chr8 five_prime_UTR 80664533 80664668 80664533 ID=MsG0880046986.01.T01:five_prime_utr;Parent=MsG0880046986.01.T01
Chr8 CDS 80664669 80664935 80664669 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80665133 80665297 80665133 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80665394 80665544 80665394 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80665888 80666159 80665888 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80666239 80666512 80666239 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80666660 80666967 80666660 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80667383 80667664 80667383 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80668024 80668308 80668024 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 CDS 80668405 80668554 80668405 ID=MsG0880046986.01.T01:cds;Parent=MsG0880046986.01.T01
Chr8 three_prime_UTR 80668555 80668992 80668555 ID=MsG0880046986.01.T01:three_prime_utr;Parent=MsG0880046986.01.T01
Gene Sequence

>MsG0880046986.01.T01

ATGGATCTCTGTTCATTAGCATGTCCTTCTTTTGTAACACCTTGTGATCCCAGAAGAACACTTCTTCTTCCTTCTTCTTCTTCTTCTCACTCTCAATGGGGTCTTCATTTCTTCTCTCACTCTCAACAACACAACAAACTCAAGAAAAAGATTGGTGTTGTTCATGCTTCACTTTCTGAGATGGGAGAATATTATTCTCAAAGACCTCCTACTCCACTACTTGACACTATTAACTACCCAATCCACATGAAAAATCTCTCCACCAAGGAGCTGAAACAGCTTGCGGATGAACTACGTTCTGATGTTATTTTCAGTGTTTCAAGAACTGGGGGACATTTAGGTTCAAGTTTAGGTGTTGTTGAACTCACTATTGCTCTTCACTATGTTTTTAATACACCTCAGGATAAGATTCTGTGGGATGTTGGTCACCAGTCATACCCTCATAAAATTCTTACTGGTAGAAGGGATAAGATGCATACCATGAGACAGACTAATGGGTTATCTGGATTTACAAAACGTTCTGAGAGTGAATATGATTCTTTTGGCACTGGTCATAGTTCAACTACTATTTCAGCTGGACTTGGAATGGCTGTTGGGAGAGATCTGAAGGGAAGAAAGAATGATGTAGTTGCTGTTATTGGTGATGGTGCTATGACAGCGGGTCAAGCTTATGAAGCTATGAACAATGCTGGATATCTTGATTCTGATATGATTGTAATTTTGAATGACAACAAACAAGTTTCTTTACCAACTGCTACTCTTGATGGACCTATACCACCTGTAGGAGCTTTGAGTAGTGCTCTAAGTAGGTTACAATCAAACAAACCTCTTAGAGAATTGAGAGAGGTTGCAAAGGGAGTAACAAAACGAATTGGAGGTCCTATGCATGAATTGGCTGCGAAAGTTGACGAGTATGCTCGTGGTATGATCAGTGGTACTGGATCAACACTTTTTGAAGAGCTTGGACTCTACTATATCGGTCCTGTTGATGGTCATAACATAGATGATCTAGTTGCCATTCTCAAAGAAGTCAAAACTACTAATAGTACCGGTCCTGTATTGATCCATGTTATCACCGAAAAAGGCCGCGGATATCCATACGCAGAGCAAGCCGCTGACAAGTATCATGGAGTTACCAAGTTTGATCCACCAACTGGAAAGCAATTCAAAGCAACGGCTAAAACGCAATCTTACACAACATACTTTGCAGAGGCTTTGATTGCAGAAGCCAAAGCTGACAAAGATATTATCGCAATACATGCTGCGATGGGAGGTGGAACTGGCATGAATCTCTTCCATCGCCGATTCCCAACAAGATGCTTTGACGTGGGGATAGCAGAACAACATGCCGTTACATTTGCTGCAGGTCTAGCTTGTGAAGGCCTTAAGCCTTTTTGTGCAATATACTCATCATTCTTGCAAAGGGCCTATGACCAGGTGGTACATGACGTGGATTTGCAAAAGCTTCCTGTAAGATTTGCAATGGACAGAGCTGGATTAGTTGGATCAGATGGTCCTACACATTGTGGTTCTTTTGACGTCACTTTTATGGCATGCCTCCCCAACATGGTGGTGATGGCTCCTTCTGATGAAGCAGAGCTTTGTCACATGGTTGCCACTGCAGCAGCCATCGACGATCGACCGAGTTGTTTCCGATACCCGAGGGGAAATGGCATTGGTGTTGAACTTCCAGCCGAGTACAAAGGCATTCCTCTTGAGATTGGGAAAGGTAGGATACTAATTGAAGGAGAAAGAGTAGCCCTATTGGGCTACGGGTCAGCCGTTCAGAACTGTTTGGCTGCGGCTTCCTTAGTTGAACAACATGGCTTGCGCTTAACTGTTGCCGATGCACGTTTCTGCAAGCCATTGGATCGATCCTTGATTCGCAGTCTGGCAAAATCACATGAGGTTCTGATCACCGTAGAAGAAGGATCAATTGGAGGATTTGGTTCTCATGTTGCTCAGTTCATGGCCCTTGATGGTCTTTTAGATGGAAATTTGAAGTGGAGGCCGGTGGTTCTTCCCGACCGATATATTGACCATGGATCACCTGCTGACCAATTGTCAATGGCTGGTCTTACACCCTCTCACATAGCAGCAACAGTGTTCAACATACTTGGACAAACAAGAGAGGCATTAGAGGTCATGTCATAA

Protein sequence

>MsG0880046986.01.T01

MDLCSLACPSFVTPCDPRRTLLLPSSSSSHSQWGLHFFSHSQQHNKLKKKIGVVHASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHLGSSLGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGPVLIHVITEKGRGYPYAEQAADKYHGVTKFDPPTGKQFKATAKTQSYTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHCGSFDVTFMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPAEYKGIPLEIGKGRILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLSMAGLTPSHIAATVFNILGQTREALEVMS*