AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007435.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007435.01.T01 MTR_2g025420 88.849 278 31 0 47 324 93 370 0.0 521
MsG0280007435.01.T01 MTR_2g024100 70.545 275 78 2 51 324 87 359 4.79e-129 374
MsG0280007435.01.T01 MTR_2g426060 68.015 272 78 3 53 324 92 354 4.89e-128 372
MsG0280007435.01.T01 MTR_2g028130 65.934 273 85 4 53 324 99 364 3.75e-121 354
MsG0280007435.01.T01 MTR_2g425980 65.074 272 87 2 53 324 91 354 6.06e-121 354
MsG0280007435.01.T01 MTR_2g426070 66.421 271 77 4 54 324 99 355 1.22e-120 353
MsG0280007435.01.T01 MTR_0667s0010 63.869 274 94 3 52 324 86 355 1.56e-120 353
MsG0280007435.01.T01 MTR_2g426020 63.043 276 90 4 50 324 90 354 4.59e-117 343
MsG0280007435.01.T01 MTR_2g025960 63.370 273 87 5 56 324 1 264 1.23e-116 339
MsG0280007435.01.T01 MTR_3g083010 63.406 276 91 5 53 324 101 370 2.10e-115 340
MsG0280007435.01.T01 MTR_2g028140 63.406 276 88 5 51 324 99 363 2.05e-112 332
MsG0280007435.01.T01 MTR_2g426090 60.870 276 94 4 50 324 90 352 6.98e-111 328
MsG0280007435.01.T01 MTR_4g070550 61.957 276 92 5 52 324 93 358 1.31e-109 325
MsG0280007435.01.T01 MTR_2g028160 60.727 275 98 5 53 324 99 366 3.62e-108 322
MsG0280007435.01.T01 MTR_2g028110 59.420 276 91 5 50 324 80 335 2.92e-106 315
MsG0280007435.01.T01 MTR_2g021050 57.401 277 85 4 49 324 84 328 1.28e-99 298
MsG0280007435.01.T01 MTR_8g099460 58.545 275 101 3 50 324 83 344 7.46e-97 292
MsG0280007435.01.T01 MTR_1g068835 57.455 275 93 7 51 324 82 333 1.35e-95 288
MsG0280007435.01.T01 MTR_2g031720 53.047 279 102 7 52 324 86 341 3.77e-91 277
MsG0280007435.01.T01 MTR_2g031640 54.613 271 100 6 56 324 88 337 9.20e-91 276
MsG0280007435.01.T01 MTR_2g031680 54.909 275 103 4 50 324 81 334 4.44e-87 266
MsG0280007435.01.T01 MTR_1g068875 54.710 276 94 7 53 324 84 332 6.88e-86 263
MsG0280007435.01.T01 MTR_2g024110 50.929 269 106 5 60 323 93 340 6.96e-86 263
MsG0280007435.01.T01 MTR_1g068860 56.134 269 96 6 56 323 87 334 6.89e-85 261
MsG0280007435.01.T01 MTR_2g026010 53.497 286 98 10 47 323 79 338 3.23e-81 252
MsG0280007435.01.T01 MTR_2g037520 68.919 148 38 2 178 324 1 141 1.54e-62 196
MsG0280007435.01.T01 MTR_4g006270 42.143 280 112 8 58 324 87 329 1.67e-56 188
MsG0280007435.01.T01 MTR_4g133170 39.130 276 136 7 52 323 83 330 3.13e-54 182
MsG0280007435.01.T01 MTR_2g040050 40.574 244 99 7 56 293 38 241 1.77e-51 171
MsG0280007435.01.T01 MTR_2g031700 50.000 162 68 2 54 215 85 233 1.36e-45 157
MsG0280007435.01.T01 MTR_5g083940 38.662 269 98 10 56 322 64 267 1.62e-37 136
MsG0280007435.01.T01 MTR_2g025440 70.455 88 25 1 238 324 3 90 3.40e-32 120
MsG0280007435.01.T01 MTR_2g025440 71.154 52 14 1 1 52 178 228 5.11e-14 70.9
MsG0280007435.01.T01 MTR_3g086960 54.264 129 44 5 201 324 9 127 1.33e-31 116
MsG0280007435.01.T01 MTR_1g068905 35.662 272 90 9 53 324 84 270 2.40e-31 120
MsG0280007435.01.T01 MTR_7g110370 65.432 81 28 0 225 305 20 100 6.34e-29 111
MsG0280007435.01.T01 MTR_2g021150 31.452 248 137 9 58 302 113 330 2.34e-27 110
MsG0280007435.01.T01 MTR_7g110360 58.696 92 35 2 236 324 204 295 2.08e-26 107
MsG0280007435.01.T01 MTR_3g009300 31.507 219 123 7 58 276 97 288 9.07e-26 105
MsG0280007435.01.T01 MTR_7g407070 30.667 225 130 7 58 276 133 337 2.85e-23 99.4
MsG0280007435.01.T01 MTR_3g006670 31.532 222 120 7 58 276 144 336 2.98e-23 99.8
MsG0280007435.01.T01 MTR_3g009260 30.916 262 148 12 59 319 131 360 3.94e-23 99.0
MsG0280007435.01.T01 MTR_3g024130 28.378 222 127 6 58 276 58 250 5.02e-23 97.4
MsG0280007435.01.T01 MTR_3g014570 29.719 249 145 7 58 303 121 342 2.47e-22 96.7
MsG0280007435.01.T01 MTR_3g013770 30.916 262 140 13 58 312 132 359 2.18e-21 94.0
MsG0280007435.01.T01 MTR_1g097560 29.323 266 142 13 58 322 129 349 2.54e-21 93.6
MsG0280007435.01.T01 MTR_3g007430 30.222 225 129 8 56 277 130 329 3.76e-21 93.2
MsG0280007435.01.T01 MTR_2g021190 31.718 227 119 11 53 274 111 306 8.68e-21 92.0
MsG0280007435.01.T01 MTR_3g007270 29.646 226 133 8 51 276 144 343 1.78e-20 91.7
MsG0280007435.01.T01 MTR_2g046900 29.818 275 151 11 58 324 123 363 2.14e-20 91.3
MsG0280007435.01.T01 MTR_3g009240 29.963 267 146 14 59 319 127 358 3.42e-20 90.5
MsG0280007435.01.T01 MTR_3g007410 31.081 222 124 8 58 276 143 338 3.81e-20 90.5
MsG0280007435.01.T01 MTR_3g007360 31.718 227 116 9 58 276 143 338 5.08e-20 90.1
MsG0280007435.01.T01 MTR_3g009310 30.403 273 147 15 52 319 132 366 5.80e-20 90.1
MsG0280007435.01.T01 MTR_1g097330 30.515 272 147 11 58 324 107 341 6.82e-20 90.1
MsG0280007435.01.T01 MTR_3g010390 28.444 225 132 6 58 276 134 335 7.20e-20 89.7
MsG0280007435.01.T01 MTR_3g036290 30.798 263 131 12 52 309 110 326 1.51e-19 88.6
MsG0280007435.01.T01 MTR_3g436150 29.730 222 129 7 59 276 133 331 1.63e-19 88.6
MsG0280007435.01.T01 MTR_3g014540 31.390 223 121 9 58 276 121 315 2.54e-19 88.2
MsG0280007435.01.T01 MTR_6g065980 29.279 222 113 12 59 278 109 288 2.81e-19 87.8
MsG0280007435.01.T01 MTR_4g028510 27.917 240 147 8 60 285 120 347 4.50e-19 87.8
MsG0280007435.01.T01 MTR_2g029990 28.311 219 125 10 58 274 148 336 6.44e-19 87.0
MsG0280007435.01.T01 MTR_2g047832 28.374 289 149 11 58 324 124 376 1.10e-18 86.7
MsG0280007435.01.T01 MTR_2g046860 30.677 251 144 10 58 304 7 231 1.35e-18 85.1
MsG0280007435.01.T01 MTR_4g130330 29.832 238 128 11 60 276 106 325 1.60e-18 85.9
MsG0280007435.01.T01 MTR_6g080680 26.374 273 166 11 59 323 120 365 1.82e-18 85.9
MsG0280007435.01.T01 MTR_4g028750 28.099 242 140 10 60 285 120 343 2.05e-18 85.5
MsG0280007435.01.T01 MTR_4g055060 28.063 253 154 6 58 307 125 352 2.86e-18 85.1
MsG0280007435.01.T01 MTR_2g046830 29.779 272 147 12 58 324 120 352 5.63e-18 84.3
MsG0280007435.01.T01 MTR_3g011100 28.674 279 153 10 53 319 327 571 5.98e-18 85.1
MsG0280007435.01.T01 MTR_5g046280 27.979 193 113 8 84 276 20 186 9.81e-18 81.6
MsG0280007435.01.T01 MTR_7g009265 24.910 277 159 11 58 306 31 286 1.16e-17 82.8
MsG0280007435.01.T01 MTR_2g021155 29.018 224 124 9 58 276 128 321 1.28e-17 84.3
MsG0280007435.01.T01 MTR_2g021155 28.141 199 114 10 83 274 708 884 2.19e-12 68.6
MsG0280007435.01.T01 MTR_2g046920 28.102 274 149 10 58 324 119 351 1.30e-17 83.2
MsG0280007435.01.T01 MTR_5g046300 28.272 191 111 8 86 276 119 283 1.42e-17 82.8
MsG0280007435.01.T01 MTR_5g046290 28.272 191 111 8 86 276 119 283 1.42e-17 82.8
MsG0280007435.01.T01 MTR_3g013740 28.148 270 156 12 58 321 147 384 1.70e-17 82.8
MsG0280007435.01.T01 MTR_4g061340 27.004 237 125 8 54 276 113 315 2.00e-17 82.4
MsG0280007435.01.T01 MTR_8g054320 32.420 219 107 10 62 276 56 237 2.11e-17 81.6
MsG0280007435.01.T01 MTR_3g007330 28.829 222 126 10 58 276 135 327 6.14e-17 81.3
MsG0280007435.01.T01 MTR_4g134560 29.839 248 143 11 53 297 166 385 1.31e-16 80.5
MsG0280007435.01.T01 MTR_1g050542 29.565 230 125 10 48 273 136 332 1.68e-16 80.1
MsG0280007435.01.T01 MTR_0044s0300 28.244 262 150 13 59 319 136 360 1.72e-16 79.7
MsG0280007435.01.T01 MTR_5g057710 28.384 229 132 10 50 276 132 330 2.53e-16 79.3
MsG0280007435.01.T01 MTR_3g030350 27.273 264 155 10 59 319 130 359 2.77e-16 79.3
MsG0280007435.01.T01 MTR_6g027890 29.323 266 152 12 55 303 38 284 2.79e-16 78.6
MsG0280007435.01.T01 MTR_5g057790 27.897 233 128 12 50 276 132 330 4.18e-16 79.0
MsG0280007435.01.T01 MTR_1g094210 26.690 281 153 11 48 323 142 374 4.85e-16 78.6
MsG0280007435.01.T01 MTR_4g006350 29.588 267 136 11 58 302 595 831 4.95e-16 79.3
MsG0280007435.01.T01 MTR_6g004660 28.378 222 132 8 58 276 117 314 5.26e-16 78.6
MsG0280007435.01.T01 MTR_6g017305 24.555 281 152 10 75 324 6 257 7.02e-16 77.0
MsG0280007435.01.T01 MTR_4g028680 26.692 266 155 13 60 308 120 362 8.57e-16 77.8
MsG0280007435.01.T01 MTR_6g021880 26.126 222 137 7 58 276 119 316 1.19e-15 77.4
MsG0280007435.01.T01 MTR_3g024040 29.804 255 139 14 58 310 121 337 1.26e-15 77.4
MsG0280007435.01.T01 MTR_5g011200 25.108 231 137 8 50 276 107 305 1.46e-15 77.0
MsG0280007435.01.T01 MTR_6g079810 25.000 292 164 13 60 324 171 434 1.60e-15 77.4
MsG0280007435.01.T01 MTR_1g088120 30.403 273 132 14 58 297 107 354 1.76e-15 77.0
MsG0280007435.01.T01 MTR_4g023120 28.745 247 125 12 60 294 98 305 1.86e-15 76.6
MsG0280007435.01.T01 MTR_5g096630 26.241 282 166 14 61 323 126 384 2.03e-15 77.0
MsG0280007435.01.T01 MTR_5g009060 26.639 244 147 9 48 282 128 348 2.31e-15 76.6
MsG0280007435.01.T01 MTR_3g036335 27.481 262 153 14 59 319 141 366 2.87e-15 76.3
MsG0280007435.01.T01 MTR_7g061060 26.923 286 155 13 58 323 111 362 2.96e-15 76.3
MsG0280007435.01.T01 MTR_8g101580 26.690 281 159 12 51 324 131 371 2.98e-15 76.3
MsG0280007435.01.T01 MTR_1g094210 26.515 264 146 10 48 306 142 362 3.00e-15 76.3
MsG0280007435.01.T01 MTR_6g017295 24.126 286 165 12 58 312 41 305 3.68e-15 76.6
MsG0280007435.01.T01 MTR_4g030830 26.296 270 148 11 60 305 112 354 3.80e-15 75.9
MsG0280007435.01.T01 MTR_1g097490 27.273 275 159 10 48 322 132 365 4.54e-15 75.9
MsG0280007435.01.T01 MTR_3g006570 30.126 239 141 10 86 322 136 350 6.77e-15 75.1
MsG0280007435.01.T01 MTR_1g054575 26.639 244 142 6 58 296 143 354 8.34e-15 75.5
MsG0280007435.01.T01 MTR_6g007150 27.928 222 134 8 56 275 67 264 9.70e-15 74.3
MsG0280007435.01.T01 MTR_4g117850 27.200 250 140 9 56 297 112 327 1.03e-14 74.7
MsG0280007435.01.T01 MTR_7g445890 25.180 278 158 10 58 305 87 344 1.21e-14 74.3
MsG0280007435.01.T01 MTR_6g027910 26.103 272 161 12 56 319 107 346 1.33e-14 74.3
MsG0280007435.01.T01 MTR_7g079160 25.879 313 165 14 50 324 117 400 2.31e-14 73.9
MsG0280007435.01.T01 MTR_6g053260 29.224 219 123 13 58 274 434 622 2.51e-14 73.9
MsG0280007435.01.T01 MTR_6g086825 25.524 286 163 13 59 323 174 430 3.49e-14 73.2
MsG0280007435.01.T01 MTR_3g011020 30.625 160 94 4 122 276 158 305 3.53e-14 72.8
MsG0280007435.01.T01 MTR_4g008790 26.936 297 141 11 58 324 163 413 4.43e-14 73.2
MsG0280007435.01.T01 MTR_7g066100 29.536 237 133 10 58 276 105 325 4.47e-14 72.8
MsG0280007435.01.T01 MTR_5g043160 25.926 297 161 12 58 324 166 433 4.66e-14 72.8
MsG0280007435.01.T01 MTR_4g107780 26.070 257 144 9 55 303 127 345 5.14e-14 72.8
MsG0280007435.01.T01 MTR_4g107820 26.070 257 144 9 55 303 127 345 5.48e-14 72.4
MsG0280007435.01.T01 MTR_4g107780 26.070 257 144 9 55 303 127 345 5.48e-14 72.4
MsG0280007435.01.T01 MTR_7g061050 27.948 229 130 9 58 276 108 311 5.52e-14 72.4
MsG0280007435.01.T01 MTR_4g107820 26.070 257 144 9 55 303 127 345 5.64e-14 72.4
MsG0280007435.01.T01 MTR_6g060650 26.190 252 150 10 61 308 113 332 6.53e-14 72.0
MsG0280007435.01.T01 MTR_7g070440 26.126 222 150 7 58 276 95 305 7.37e-14 72.0
MsG0280007435.01.T01 MTR_4g031770 24.336 226 130 6 58 276 98 289 7.57e-14 72.0
MsG0280007435.01.T01 MTR_4g019990 25.275 273 157 10 58 310 108 353 8.24e-14 72.0
MsG0280007435.01.T01 MTR_0128s0070 25.468 267 154 10 58 307 122 360 8.50e-14 72.0
MsG0280007435.01.T01 MTR_7g056820 26.071 280 153 13 52 313 102 345 8.51e-14 72.0
MsG0280007435.01.T01 MTR_4g028660 29.167 240 142 11 60 285 119 344 9.64e-14 71.6
MsG0280007435.01.T01 MTR_4g027450 29.167 240 142 11 60 285 119 344 9.64e-14 71.6
MsG0280007435.01.T01 MTR_4g034860 25.000 264 162 8 58 302 125 371 1.14e-13 71.6
MsG0280007435.01.T01 MTR_2g055970 24.706 255 143 10 58 302 305 520 1.17e-13 72.0
MsG0280007435.01.T01 MTR_4g023070 25.758 264 136 13 60 301 98 323 1.17e-13 71.2
MsG0280007435.01.T01 MTR_3g024150 26.549 226 124 10 53 276 131 316 1.43e-13 71.2
MsG0280007435.01.T01 MTR_6g007135 25.191 262 163 8 50 303 116 352 1.64e-13 70.9
MsG0280007435.01.T01 MTR_3g030320 26.721 247 144 12 59 303 44 255 2.44e-13 69.7
MsG0280007435.01.T01 MTR_4g023080 26.800 250 129 11 60 301 104 307 2.49e-13 70.5
MsG0280007435.01.T01 MTR_3g007390 28.834 163 96 5 120 278 1 147 3.30e-13 68.2
MsG0280007435.01.T01 MTR_5g070080 25.882 255 152 10 56 305 120 342 3.70e-13 70.1
MsG0280007435.01.T01 MTR_4g118370 27.111 225 111 10 84 300 32 211 3.96e-13 68.6
MsG0280007435.01.T01 MTR_4g023380 24.615 260 137 10 60 301 112 330 4.02e-13 69.7
MsG0280007435.01.T01 MTR_7g013590 24.664 223 140 8 58 276 126 324 4.09e-13 70.1
MsG0280007435.01.T01 MTR_7g066840 25.342 292 158 13 55 324 119 372 4.57e-13 69.7
MsG0280007435.01.T01 MTR_4g024890 25.912 274 156 11 58 312 107 352 4.58e-13 69.7
MsG0280007435.01.T01 MTR_3g007300 30.357 224 109 11 53 276 126 302 5.06e-13 69.3
MsG0280007435.01.T01 MTR_3g030250 27.481 262 144 12 58 319 135 350 5.38e-13 69.3
MsG0280007435.01.T01 MTR_7g055977 26.531 294 161 14 53 324 97 357 5.42e-13 69.3
MsG0280007435.01.T01 MTR_8g063370 24.268 239 143 11 53 279 115 327 5.69e-13 69.3
MsG0280007435.01.T01 MTR_6g090180 24.567 289 156 14 66 323 151 408 6.00e-13 69.7
MsG0280007435.01.T01 MTR_4g030090 25.833 240 145 9 58 285 111 329 6.02e-13 69.3
MsG0280007435.01.T01 MTR_3g010590 28.807 243 129 14 86 323 157 360 6.04e-13 69.3
MsG0280007435.01.T01 MTR_6g478230 25.267 281 161 12 59 323 130 377 6.24e-13 69.3
MsG0280007435.01.T01 MTR_6g014720 27.451 255 156 10 50 302 98 325 7.68e-13 68.9
MsG0280007435.01.T01 MTR_4g013180 27.509 269 155 12 58 304 102 352 8.79e-13 69.3
MsG0280007435.01.T01 MTR_1g054725 25.112 223 130 8 58 273 115 307 9.39e-13 68.6
MsG0280007435.01.T01 MTR_5g007610 29.437 231 124 10 58 276 133 336 1.31e-12 68.6
MsG0280007435.01.T01 MTR_6g013270 27.059 255 158 10 50 302 115 343 1.37e-12 68.2
MsG0280007435.01.T01 MTR_2g435950 28.832 274 153 13 52 315 39 280 1.66e-12 67.4
MsG0280007435.01.T01 MTR_3g024110 27.273 231 121 11 48 274 188 375 2.23e-12 67.8
MsG0280007435.01.T01 MTR_5g056990 31.447 159 90 7 120 276 34 175 2.54e-12 66.2
MsG0280007435.01.T01 MTR_4g013175 27.213 305 152 14 58 324 121 393 2.66e-12 67.4
MsG0280007435.01.T01 MTR_1g055065 26.855 283 160 13 49 318 8 256 3.38e-12 66.2
MsG0280007435.01.T01 MTR_4g118380 28.030 264 151 12 61 314 115 349 3.43e-12 67.0
MsG0280007435.01.T01 MTR_5g046260 24.545 220 107 9 57 276 93 253 3.43e-12 66.6
MsG0280007435.01.T01 MTR_3g034180 25.969 258 140 12 56 297 216 438 4.47e-12 67.0
MsG0280007435.01.T01 MTR_5g022420 25.000 272 152 13 58 323 120 345 4.82e-12 66.6
MsG0280007435.01.T01 MTR_3g009290 29.878 164 97 5 53 215 114 260 5.00e-12 65.5
MsG0280007435.01.T01 MTR_2g060555 26.961 204 125 5 106 308 72 252 5.04e-12 65.9
MsG0280007435.01.T01 MTR_3g011120 27.273 209 124 8 85 285 137 325 5.24e-12 66.2
MsG0280007435.01.T01 MTR_3g464500 24.913 289 166 10 50 309 101 367 5.26e-12 66.6
MsG0280007435.01.T01 MTR_1g115160 25.339 221 132 10 57 276 109 297 5.98e-12 66.2
MsG0280007435.01.T01 MTR_1g056710 24.229 227 131 6 58 276 125 318 6.92e-12 66.2
MsG0280007435.01.T01 MTR_8g467140 24.336 226 124 9 58 273 126 314 7.17e-12 65.9
MsG0280007435.01.T01 MTR_3g030310 23.963 217 130 10 59 274 126 308 7.68e-12 65.9
MsG0280007435.01.T01 MTR_6g092560 26.780 295 154 13 50 312 99 363 9.70e-12 65.9
MsG0280007435.01.T01 MTR_6g079790 20.956 272 183 7 69 323 23 279 1.24e-11 65.1
MsG0280007435.01.T01 MTR_5g097350 24.176 273 154 12 61 324 131 359 1.28e-11 65.5
MsG0280007435.01.T01 MTR_0097s0030 27.869 244 128 11 58 287 108 317 1.30e-11 65.5
MsG0280007435.01.T01 MTR_2g047240 27.869 244 128 11 58 287 108 317 1.30e-11 65.5
MsG0280007435.01.T01 MTR_3g013950 27.757 263 151 12 59 302 103 345 1.32e-11 65.5
MsG0280007435.01.T01 MTR_7g077970 26.217 267 159 9 58 308 114 358 1.34e-11 65.5
MsG0280007435.01.T01 MTR_3g083640 26.136 264 151 11 61 323 157 377 1.34e-11 65.5
MsG0280007435.01.T01 MTR_4g117750 27.027 222 135 7 86 300 109 310 1.42e-11 65.5
MsG0280007435.01.T01 MTR_3g034160 24.603 252 143 12 55 292 101 319 1.47e-11 65.1
MsG0280007435.01.T01 MTR_3g010870 25.991 227 127 11 86 299 150 348 1.57e-11 65.1
MsG0280007435.01.T01 MTR_2g043400 24.101 278 142 12 58 305 133 371 1.59e-11 65.1
MsG0280007435.01.T01 MTR_4g094365 28.936 235 134 9 82 305 115 327 1.63e-11 65.1
MsG0280007435.01.T01 MTR_0267s0050 27.481 262 151 12 59 302 103 343 1.67e-11 65.1
MsG0280007435.01.T01 MTR_2g046800 28.125 224 130 8 53 276 135 327 1.70e-11 65.1
MsG0280007435.01.T01 MTR_6g087620 27.228 202 113 10 83 276 48 223 1.85e-11 63.9
MsG0280007435.01.T01 MTR_5g022040 28.169 284 137 15 61 321 185 424 1.99e-11 65.1
MsG0280007435.01.T01 MTR_4g023090 24.390 246 149 10 60 301 112 324 2.02e-11 64.7
MsG0280007435.01.T01 MTR_1g442850 24.535 269 155 8 58 305 99 340 2.04e-11 64.7
MsG0280007435.01.T01 MTR_5g037680 22.500 240 157 9 86 323 144 356 2.15e-11 64.7
MsG0280007435.01.T01 MTR_5g057020 25.185 270 143 11 17 276 95 315 2.81e-11 63.9
MsG0280007435.01.T01 MTR_2g043410 25.979 281 147 13 50 305 126 370 2.87e-11 64.3
MsG0280007435.01.T01 MTR_5g097210 25.856 263 138 11 60 305 104 326 2.88e-11 64.3
MsG0280007435.01.T01 MTR_1g015740 28.641 206 108 8 106 305 105 277 3.08e-11 63.9
MsG0280007435.01.T01 MTR_4g014370 27.092 251 142 13 52 276 109 344 3.17e-11 64.3
MsG0280007435.01.T01 MTR_2g104340 24.904 261 153 11 86 324 129 368 3.32e-11 64.3
MsG0280007435.01.T01 MTR_4g027370 29.487 234 134 11 58 286 170 377 3.38e-11 64.3
MsG0280007435.01.T01 MTR_7g056570 26.838 272 138 12 56 302 110 345 4.35e-11 63.9
MsG0280007435.01.T01 MTR_4g013185 28.013 307 147 16 58 324 121 393 4.42e-11 63.9
MsG0280007435.01.T01 MTR_6g090250 23.779 307 177 13 50 320 106 391 4.65e-11 63.9
MsG0280007435.01.T01 MTR_0134s0060 22.819 298 167 13 59 323 115 382 4.99e-11 63.5
MsG0280007435.01.T01 MTR_3g006640 26.860 242 113 12 59 276 19 220 5.77e-11 62.8
MsG0280007435.01.T01 MTR_3g030240 27.660 235 125 11 86 319 158 348 5.85e-11 63.2
MsG0280007435.01.T01 MTR_7g078900 24.444 270 162 11 58 305 123 372 6.03e-11 63.5
MsG0280007435.01.T01 MTR_5g021860 29.150 247 141 13 48 286 157 377 6.30e-11 63.5
MsG0280007435.01.T01 MTR_6g055210 27.572 243 138 9 53 276 111 334 6.31e-11 63.5
MsG0280007435.01.T01 MTR_5g010550 27.313 227 136 10 58 276 173 378 6.69e-11 63.5
MsG0280007435.01.T01 MTR_5g010550 27.313 227 136 10 58 276 187 392 6.89e-11 63.5
MsG0280007435.01.T01 MTR_6g065510 24.478 335 184 14 27 324 5 307 7.69e-11 62.8
MsG0280007435.01.T01 MTR_7g061090 25.260 289 162 12 58 324 128 384 7.97e-11 63.2
MsG0280007435.01.T01 MTR_5g021860 29.150 247 141 13 48 286 157 377 8.39e-11 63.2
MsG0280007435.01.T01 MTR_5g058620 27.273 209 116 9 122 305 34 231 8.97e-11 62.0
MsG0280007435.01.T01 MTR_1g058870 27.273 209 116 9 122 305 34 231 8.97e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007435.01.T01 AT4G12560 35.587 281 141 8 58 324 91 345 4.67e-43 153
MsG0280007435.01.T01 AT4G12560 35.587 281 141 8 58 324 91 345 4.67e-43 153
MsG0280007435.01.T01 AT4G12560 35.587 281 141 8 58 324 91 345 4.67e-43 153
MsG0280007435.01.T01 AT4G22390 29.032 279 157 6 58 323 91 341 1.69e-26 108
MsG0280007435.01.T01 AT4G22390 29.032 279 157 6 58 323 91 341 1.88e-26 108
MsG0280007435.01.T01 AT3G06240 27.974 311 180 12 4 308 112 384 4.74e-21 93.6
MsG0280007435.01.T01 AT3G07870 27.848 237 126 9 58 276 119 328 2.79e-13 70.5
MsG0280007435.01.T01 AT3G23880 24.528 318 186 12 8 308 47 327 4.49e-12 66.6

Find 119 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCGCACCTTGCCTCTTAT+TGG 0.172542 2:+15420938 MsG0280007435.01.T01:CDS
TAAATTTCGCGTTGCTGTTT+TGG 0.196773 2:+15421483 MsG0280007435.01.T01:CDS
TGACCTCGAGGTTGCTGTTT+TGG 0.207584 2:+15417124 MsG0280007435.01.T01:five_prime_UTR
GAATTCTCTTCACTGGATTA+TGG 0.239670 2:+15416977 MsG0280007435.01.T01:five_prime_UTR
GGGATAGGAAGAGGGATAAA+AGG 0.258612 2:-15421073 None:intergenic
AGTTTATGAACGGTGGTTAA+TGG 0.269104 2:-15421160 None:intergenic
CCTCTTCCTGTTGAATTAGA+AGG 0.299288 2:+15421427 MsG0280007435.01.T01:CDS
TTGTTGAGAATTCTCTTCAC+TGG 0.308853 2:+15421323 MsG0280007435.01.T01:CDS
ATCAGTTGTTTGCGGGTGTT+AGG 0.315374 2:-15421046 None:intergenic
GAACTACTAAAATTGATGTT+TGG 0.316424 2:+15417177 MsG0280007435.01.T01:five_prime_UTR
CTAAAAGTGCAATCCGTAAA+AGG 0.320434 2:+15418005 MsG0280007435.01.T01:CDS
GTTTGGGTGATGAAAGAATA+TGG 0.336028 2:+15421553 MsG0280007435.01.T01:CDS
GTTCCTCTTCCTGCTGAAAT+AGG 0.338230 2:+15417071 MsG0280007435.01.T01:five_prime_UTR
AACTACTAAAATTGATGTTT+GGG 0.341262 2:+15417178 MsG0280007435.01.T01:five_prime_UTR
TCACATCATAATCTAATCTA+TGG 0.344559 2:+15417860 MsG0280007435.01.T01:five_prime_UTR
CATTGAAAATCTCAAGAGTT+AGG 0.345739 2:-15417046 None:intergenic
CTAACTTGGATAAAACTCTT+AGG 0.347002 2:+15421698 MsG0280007435.01.T01:CDS
GAATTCTCTTCACTGGGTTA+TGG 0.351337 2:+15421330 MsG0280007435.01.T01:CDS
AATGGCCTTGTTTAGAGAAT+TGG 0.352154 2:+15417913 MsG0280007435.01.T01:exon
AAACTACTAAAATTGATGTT+TGG 0.356359 2:+15421536 MsG0280007435.01.T01:CDS
GTTTGGGTGATGAAAGAATA+TGG 0.362113 2:+15417194 MsG0280007435.01.T01:five_prime_UTR
TCTCTAAACAAGGCCATTGC+TGG 0.379357 2:-15417908 None:intergenic
AGGGATGATCAGTTGTTTGC+GGG 0.383429 2:-15421053 None:intergenic
TTGATCGTGAGAAGCTGATT+TGG 0.387799 2:+15417333 MsG0280007435.01.T01:five_prime_UTR
ACGCATATACTGCCGCGATC+GGG 0.395770 2:-15421118 None:intergenic
ACCGTGTTTCGATTTACCTT+TGG 0.398314 2:+15417256 MsG0280007435.01.T01:five_prime_UTR
AACTACTAAAATTGATGTTT+GGG 0.401477 2:+15421537 MsG0280007435.01.T01:CDS
TTGTTGAGAATTCTCTTCAC+TGG 0.404513 2:+15416970 MsG0280007435.01.T01:five_prime_UTR
ATCGTGTTTCAATTCACCTT+TGG 0.407323 2:+15421615 MsG0280007435.01.T01:CDS
AGCAGCTTTCGCCTCTCCTT+CGG 0.412080 2:-15417984 None:intergenic
AAACTCTTAGGAAGCTGGTT+TGG 0.413773 2:+15421710 MsG0280007435.01.T01:CDS
GGATAGGAAGAGGGATAAAA+GGG 0.415501 2:-15421072 None:intergenic
ATTATGGCTCGGAAATTTGA+TGG 0.417597 2:+15416993 MsG0280007435.01.T01:five_prime_UTR
AGTATATGCGTTCACGGCTT+CGG 0.420379 2:+15421130 MsG0280007435.01.T01:CDS
TGAAGAGCGTACGGCATACT+AGG 0.423500 2:-15421277 None:intergenic
CTTTATGTTATTCTAGTGAT+GGG 0.427605 2:+15417291 MsG0280007435.01.T01:five_prime_UTR
TCTTCACCTTCTAATTCAAC+AGG 0.427716 2:-15421433 None:intergenic
GGTTGTTGCCTATAGATAAA+AGG 0.431253 2:-15420919 None:intergenic
TTGTCAGATCCCTCAATGTC+AGG 0.432194 2:-15421094 None:intergenic
AGGTTAACAGTAATAGTAAT+GGG 0.433389 2:+15421455 MsG0280007435.01.T01:CDS
CCTTTATGTTATTCTAGTGA+TGG 0.433843 2:+15417290 MsG0280007435.01.T01:five_prime_UTR
TCTCCTTCGGTAACTAAAGT+AGG 0.442391 2:-15417971 None:intergenic
GCCTTCTCGAAACCACAATC+TGG 0.445136 2:+15421020 MsG0280007435.01.T01:CDS
CTTCCTATCCCTGACATTGA+GGG 0.445532 2:+15421085 MsG0280007435.01.T01:CDS
AACTTGATGGGTCACATCCT+TGG 0.459348 2:+15421359 MsG0280007435.01.T01:CDS
GGATAAAACTCTTAGGAAGC+TGG 0.463890 2:+15421705 MsG0280007435.01.T01:CDS
CCTCTTATTGGTTCATGCAA+CGG 0.464483 2:+15420950 MsG0280007435.01.T01:CDS
TGATGGAGGTAAGGTTCTGT+TGG 0.467037 2:+15421666 MsG0280007435.01.T01:CDS
CTCTTCACTGGATTATGGCT+CGG 0.467889 2:+15416982 MsG0280007435.01.T01:five_prime_UTR
GGCCTTGTTTAGAGAATTGG+AGG 0.468339 2:+15417916 MsG0280007435.01.T01:CDS
GTTGGAAGCAAATCCTAACT+TGG 0.470583 2:+15421684 MsG0280007435.01.T01:CDS
GTTATGGCGAAGAAACTTGA+TGG 0.485178 2:+15421346 MsG0280007435.01.T01:CDS
CGCGGCAGTATATGCGTTCA+CGG 0.487005 2:+15421124 MsG0280007435.01.T01:CDS
CCTTCTAATTCAACAGGAAG+AGG 0.488144 2:-15421427 None:intergenic
TGGTTTCGAGAAGGCCATAA+GGG 0.490976 2:-15421012 None:intergenic
AACGCATATACTGCCGCGAT+CGG 0.493076 2:-15421119 None:intergenic
GTGGTTTCGAGAAGGCCATA+AGG 0.494242 2:-15421013 None:intergenic
TGTTGAGAATTCTCTTCACT+GGG 0.495633 2:+15421324 MsG0280007435.01.T01:CDS
GAGGTTAACAGTAATAGTAA+TGG 0.497502 2:+15421454 MsG0280007435.01.T01:CDS
ATCTATGGTTATTGCATCGT+CGG 0.498565 2:+15417875 MsG0280007435.01.T01:five_prime_UTR
TCTTCCTATCCCTGACATTG+AGG 0.503305 2:+15421084 MsG0280007435.01.T01:CDS
TTTATGTTATTCTAGTGATG+GGG 0.504528 2:+15417292 MsG0280007435.01.T01:five_prime_UTR
TCAGTTGTTTGCGGGTGTTA+GGG 0.504685 2:-15421045 None:intergenic
GGCCTCCTCGCCCTTTCTGA+CGG 0.506119 2:+15420971 MsG0280007435.01.T01:CDS
CCTCCTATTTCAGCAGGAAG+AGG 0.510118 2:-15417074 None:intergenic
AAACAACTTCTCCGTCAGAA+AGG 0.515423 2:-15420982 None:intergenic
CTTCAATATGTTCAAGCCAT+GGG 0.518445 2:+15421295 MsG0280007435.01.T01:CDS
AACAACTTCTCCGTCAGAAA+GGG 0.519137 2:-15420981 None:intergenic
TTATTCTAGTGATGGAGGTA+AGG 0.519887 2:+15421657 MsG0280007435.01.T01:CDS
CCGTTGTGTTATTCTAGTGA+TGG 0.523682 2:+15421649 MsG0280007435.01.T01:CDS
CCGTTGCATGAACCAATAAG+AGG 0.524376 2:-15420950 None:intergenic
CCATCACTAGAATAACATAA+AGG 0.527786 2:-15417290 None:intergenic
TTATGGCTCGGAAATTTGAT+GGG 0.530179 2:+15416994 MsG0280007435.01.T01:five_prime_UTR
ATTTACCTTTGGATATCTTG+AGG 0.532575 2:+15417267 MsG0280007435.01.T01:five_prime_UTR
TTAGCTTGAAAACAAACTCG+TGG 0.540049 2:+15421245 MsG0280007435.01.T01:CDS
TCTTCAATATGTTCAAGCCA+TGG 0.543205 2:+15421294 MsG0280007435.01.T01:CDS
ACTTCACCTCCTATTTCAGC+AGG 0.545814 2:-15417080 None:intergenic
GTGAAGTGGTTAATAGTAGT+CGG 0.546962 2:+15417096 MsG0280007435.01.T01:five_prime_UTR
GTCCCTACTTTAGTTACCGA+AGG 0.554742 2:+15417968 MsG0280007435.01.T01:CDS
TCAATGTCAGGGATAGGAAG+AGG 0.555308 2:-15421082 None:intergenic
ATTGGAGGCATTAAAATGCA+TGG 0.560967 2:+15417931 MsG0280007435.01.T01:CDS
GATCCCTCAATGTCAGGGAT+AGG 0.561405 2:-15421088 None:intergenic
CAAATAACCAAGTGATTCTG+AGG 0.561601 2:-15421183 None:intergenic
CGCATATACTGCCGCGATCG+GGG 0.563472 2:-15421117 None:intergenic
CTCCTTCGGTAACTAAAGTA+GGG 0.564107 2:-15417970 None:intergenic
TTCAATATGTTCAAGCCATG+GGG 0.564135 2:+15421296 MsG0280007435.01.T01:CDS
GGTGTTAGGGTTCCAGATTG+TGG 0.566051 2:-15421032 None:intergenic
TCCAGATTGTGGTTTCGAGA+AGG 0.570412 2:-15421021 None:intergenic
AAGGGATGATCAGTTGTTTG+CGG 0.571783 2:-15421054 None:intergenic
CATTGAAAATTTCAAGTGTG+AGG 0.576501 2:-15421399 None:intergenic
CGGTCAATTTAAACCAGCAA+TGG 0.580550 2:+15417895 MsG0280007435.01.T01:exon
AATATGGATCTAGAAATAGT+TGG 0.581636 2:+15417210 MsG0280007435.01.T01:five_prime_UTR
TGTTGAATTAGAAGGTGAAG+AGG 0.584395 2:+15421435 MsG0280007435.01.T01:CDS
TACTTTAGTTACCGAAGGAG+AGG 0.584679 2:+15417973 MsG0280007435.01.T01:CDS
ATAAACTCCTCAGAATCACT+TGG 0.585991 2:+15421176 MsG0280007435.01.T01:CDS
TTATGTTATTCTAGTGATGG+GGG 0.587293 2:+15417293 MsG0280007435.01.T01:five_prime_UTR
TGCTGAAATAGGAGGTGAAG+TGG 0.589102 2:+15417082 MsG0280007435.01.T01:five_prime_UTR
TGAACATATTGAAGAGCGTA+CGG 0.590630 2:-15421286 None:intergenic
CTTCTCCGTCAGAAAGGGCG+AGG 0.593688 2:-15420976 None:intergenic
CCTCTTCCTGCTGAAATAGG+AGG 0.596303 2:+15417074 MsG0280007435.01.T01:five_prime_UTR
GGATCTGACAACCCCGATCG+CGG 0.606309 2:+15421106 MsG0280007435.01.T01:CDS
TGCCTCCAATTCTCTAAACA+AGG 0.606631 2:-15417918 None:intergenic
TCTGAGGAGTTTATGAACGG+TGG 0.616061 2:-15421167 None:intergenic
CAATGTCAGGGATAGGAAGA+GGG 0.620469 2:-15421081 None:intergenic
TTGTGTTATTCTAGTGATGG+AGG 0.622635 2:+15421652 MsG0280007435.01.T01:CDS
AAAGGCCTCAAGATATCCAA+AGG 0.623388 2:-15417272 None:intergenic
GCATGAACCAATAAGAGGCA+AGG 0.628363 2:-15420945 None:intergenic
TGTCAGATCCCTCAATGTCA+GGG 0.629757 2:-15421093 None:intergenic
TTATGGCGAAGAAACTTGAT+GGG 0.632514 2:+15421347 MsG0280007435.01.T01:CDS
AAAGTAGGGACATCAACACT+TGG 0.638631 2:-15417956 None:intergenic
GATTCTGAGGAGTTTATGAA+CGG 0.639557 2:-15421170 None:intergenic
CTCCGTCAGAAAGGGCGAGG+AGG 0.643032 2:-15420973 None:intergenic
TATGGCTCGGAAATTTGATG+GGG 0.656025 2:+15416995 MsG0280007435.01.T01:five_prime_UTR
AACCAATAAGAGGCAAGGTG+CGG 0.656078 2:-15420940 None:intergenic
TCCAAAGGTAAATCGAAACA+CGG 0.667479 2:-15417257 None:intergenic
TCAATATGTTCAAGCCATGG+GGG 0.669674 2:+15421297 MsG0280007435.01.T01:CDS
TTAAATGCAACAATTAACCA+AGG 0.675301 2:-15421376 None:intergenic
CTCCCAAAACAGCAACCTCG+AGG 0.684366 2:-15417127 None:intergenic
CCATCACTAGAATAACACAA+CGG 0.759696 2:-15421649 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTACATATATCATATAA+TGG - Chr2:15417542-15417561 None:intergenic 15.0%
!! AAATACATATACATAAACAA+AGG - Chr2:15417636-15417655 None:intergenic 15.0%
!! AACTACATATATCATATAAT+GGG - Chr2:15417541-15417560 None:intergenic 15.0%
!! AATATGATTATGTTATAGAA+AGG - Chr2:15417757-15417776 None:intergenic 15.0%
!! ATATATCATAATCTAATCTA+TGG + Chr2:15419290-15419309 MsG0280007435.01.T01:intron 15.0%
!! TAATCATAACCATAATTAAT+CGG - Chr2:15418165-15418184 None:intergenic 15.0%
!! TTTAATCTAATCTTAAAGAA+AGG - Chr2:15419395-15419414 None:intergenic 15.0%
!!! TTAGATTAAAGAAAGAATTT+TGG + Chr2:15419405-15419424 MsG0280007435.01.T01:intron 15.0%
!! AAACTACTAAAATTGATGTT+TGG + Chr2:15421536-15421555 MsG0280007435.01.T01:CDS 20.0%
!! AACTACTAAAATTGATGTTT+GGG + Chr2:15417178-15417197 MsG0280007435.01.T01:five_prime_UTR 20.0%
!! AAGATCTATGAAAATAACAA+TGG + Chr2:15418268-15418287 MsG0280007435.01.T01:intron 20.0%
!! ATAAGTTAATATCAGTTCAA+TGG + Chr2:15417514-15417533 MsG0280007435.01.T01:intron 20.0%
!! ATAGATCAACAAGTATAAAA+GGG + Chr2:15419039-15419058 MsG0280007435.01.T01:intron 20.0%
!! CATTTCAGAATATAAATCAT+AGG - Chr2:15417812-15417831 None:intergenic 20.0%
!! CTCATTATCAAATTGTTAAT+AGG - Chr2:15420423-15420442 None:intergenic 20.0%
!! GATTTAAATTGAGATTGTAA+GGG + Chr2:15419708-15419727 MsG0280007435.01.T01:intron 20.0%
!! GCTTGTCAAAATAATTATTT+AGG - Chr2:15419471-15419490 None:intergenic 20.0%
!!! ACTTTTTATCAACTATTCTT+TGG + Chr2:15419613-15419632 MsG0280007435.01.T01:intron 20.0%
!!! ATTTTGTTAAAGTCTTACTA+GGG + Chr2:15420834-15420853 MsG0280007435.01.T01:intron 20.0%
!!! ATTTTTTTCTTCTTTCTACA+GGG + Chr2:15419667-15419686 MsG0280007435.01.T01:intron 20.0%
!!! GAAAATTGTTGTTTAGAAAT+TGG + Chr2:15419542-15419561 MsG0280007435.01.T01:intron 20.0%
!!! GAAGTTTGTTACTAATTTTT+TGG + Chr2:15420310-15420329 MsG0280007435.01.T01:intron 20.0%
!!! TATCTATGTTTCTTGTTTTT+TGG + Chr2:15418457-15418476 MsG0280007435.01.T01:intron 20.0%
! AACTTTAATGCTTAAGCTAT+AGG + Chr2:15420879-15420898 MsG0280007435.01.T01:intron 25.0%
! AATACTACTCCGATTAATTA+TGG + Chr2:15418153-15418172 MsG0280007435.01.T01:intron 25.0%
! AATATGGATCTAGAAATAGT+TGG + Chr2:15417210-15417229 MsG0280007435.01.T01:five_prime_UTR 25.0%
! AATGAACAGACTATTTAATG+TGG + Chr2:15418186-15418205 MsG0280007435.01.T01:intron 25.0%
! AGCCATGATTTAAAAATACA+GGG + Chr2:15418561-15418580 MsG0280007435.01.T01:intron 25.0%
! AGGTTAACAGTAATAGTAAT+GGG + Chr2:15421455-15421474 MsG0280007435.01.T01:CDS 25.0%
! AGTTCAGAATTTAGAGATAA+TGG - Chr2:15420033-15420052 None:intergenic 25.0%
! ATGAACAGACTATTTAATGT+GGG + Chr2:15418187-15418206 MsG0280007435.01.T01:intron 25.0%
! CAACTTATGAAGAGATATTA+GGG + Chr2:15420222-15420241 MsG0280007435.01.T01:intron 25.0%
! CAATCTCAATTTAAATCCTT+TGG - Chr2:15419705-15419724 None:intergenic 25.0%
! CACTCTATAATAATAGTACT+AGG + Chr2:15420452-15420471 MsG0280007435.01.T01:intron 25.0%
! CTTTATGTTATTCTAGTGAT+GGG + Chr2:15417291-15417310 MsG0280007435.01.T01:five_prime_UTR 25.0%
! GAACTACTAAAATTGATGTT+TGG + Chr2:15417177-15417196 MsG0280007435.01.T01:five_prime_UTR 25.0%
! GATAGATCAACAAGTATAAA+AGG + Chr2:15419038-15419057 MsG0280007435.01.T01:intron 25.0%
! GGAAAAACATATAATGAAGT+GGG + Chr2:15420855-15420874 MsG0280007435.01.T01:intron 25.0%
! GGATTTAAATTGAGATTGTA+AGG + Chr2:15419707-15419726 MsG0280007435.01.T01:intron 25.0%
! TAAACGCGACAATTAAAAAA+GGG - Chr2:15417025-15417044 None:intergenic 25.0%
! TAGCCATGATTTAAAAATAC+AGG + Chr2:15418560-15418579 MsG0280007435.01.T01:intron 25.0%
! TATATGACCCTAAAAAGATT+AGG + Chr2:15418869-15418888 MsG0280007435.01.T01:intron 25.0%
! TCAAAATGAGCCATAAAAAT+CGG - Chr2:15419847-15419866 None:intergenic 25.0%
! TCAACTTATGAAGAGATATT+AGG + Chr2:15420221-15420240 MsG0280007435.01.T01:intron 25.0%
! TCACATCATAATCTAATCTA+TGG + Chr2:15417860-15417879 MsG0280007435.01.T01:five_prime_UTR 25.0%
! TCAGATTGAATTCTCATTAT+AGG + Chr2:15417578-15417597 MsG0280007435.01.T01:intron 25.0%
! TCTATAATAATAGTACTAGG+TGG + Chr2:15420455-15420474 MsG0280007435.01.T01:intron 25.0%
! TCTTTCACAATAAAATGAAC+TGG + Chr2:15420727-15420746 MsG0280007435.01.T01:intron 25.0%
! TGAAAGGAATTATGCATATT+TGG - Chr2:15419585-15419604 None:intergenic 25.0%
! TTAAACGCGACAATTAAAAA+AGG - Chr2:15417026-15417045 None:intergenic 25.0%
! TTAAATGCAACAATTAACCA+AGG - Chr2:15421379-15421398 None:intergenic 25.0%
! TTGATTGATCAACTATACAA+AGG + Chr2:15418062-15418081 MsG0280007435.01.T01:intron 25.0%
! TTTATGTTATTCTAGTGATG+GGG + Chr2:15417292-15417311 MsG0280007435.01.T01:five_prime_UTR 25.0%
!! CTAGTACTGTTTAGAATATA+TGG + Chr2:15419962-15419981 MsG0280007435.01.T01:intron 25.0%
!! GATAATTGGAAGCATAAAAA+AGG + Chr2:15419357-15419376 MsG0280007435.01.T01:intron 25.0%
!! GATTTTGTTAAAGTCTTACT+AGG + Chr2:15420833-15420852 MsG0280007435.01.T01:intron 25.0%
!! GCTTCAGAATATAAATCTTT+TGG - Chr2:15419242-15419261 None:intergenic 25.0%
!! TAAAAAGTCATGCTTTTGAA+AGG - Chr2:15419601-15419620 None:intergenic 25.0%
!! TATTCCCTTGTTTAGATAAT+TGG + Chr2:15419343-15419362 MsG0280007435.01.T01:intron 25.0%
!! TTGGTGTAAACTTTTTACTT+TGG + Chr2:15417229-15417248 MsG0280007435.01.T01:five_prime_UTR 25.0%
!!! AAGGTTGAATTGATAATGAA+TGG + Chr2:15419814-15419833 MsG0280007435.01.T01:intron 25.0%
!!! AATATGGTTTTAGAGATAGT+TGG + Chr2:15421569-15421588 MsG0280007435.01.T01:CDS 25.0%
!!! CATTTTTTTCTTCTTTCTAC+AGG + Chr2:15419666-15419685 MsG0280007435.01.T01:intron 25.0%
!!! GTCTTTACTTTTTATATTGC+TGG + Chr2:15420180-15420199 MsG0280007435.01.T01:intron 25.0%
!!! TTCCCTGTATTTTTAAATCA+TGG - Chr2:15418566-15418585 None:intergenic 25.0%
AAACATAGATACCTATCTGT+TGG - Chr2:15418448-15418467 None:intergenic 30.0%
AACATAGTTGCATTCCAATT+AGG - Chr2:15417401-15417420 None:intergenic 30.0%
ACATAGTTGCATTCCAATTA+GGG - Chr2:15417400-15417419 None:intergenic 30.0%
AGACAATCTTACAAGATATG+GGG - Chr2:15418655-15418674 None:intergenic 30.0%
AGAGACAATCTTACAAGATA+TGG - Chr2:15418657-15418676 None:intergenic 30.0%
AGTTTCAGCTGAAAAAAGTT+GGG - Chr2:15419161-15419180 None:intergenic 30.0%
ATAATTGTACAAGCAAGACA+AGG + Chr2:15417451-15417470 MsG0280007435.01.T01:intron 30.0%
ATTATTATTGTTCACTCACC+TGG - Chr2:15418371-15418390 None:intergenic 30.0%
ATTGTAGGAAGTTGCTAAAT+CGG + Chr2:15420760-15420779 MsG0280007435.01.T01:intron 30.0%
ATTTACCTTTGGATATCTTG+AGG + Chr2:15417267-15417286 MsG0280007435.01.T01:five_prime_UTR 30.0%
CAGAATATAAATCATAGGCT+TGG - Chr2:15417807-15417826 None:intergenic 30.0%
CATTGAAAATCTCAAGAGTT+AGG - Chr2:15417049-15417068 None:intergenic 30.0%
CCATCACTAGAATAACATAA+AGG - Chr2:15417293-15417312 None:intergenic 30.0%
CCTTTATGTTATTCTAGTGA+TGG + Chr2:15417290-15417309 MsG0280007435.01.T01:five_prime_UTR 30.0%
CTAACTTGGATAAAACTCTT+AGG + Chr2:15421698-15421717 MsG0280007435.01.T01:CDS 30.0%
GAGACAATCTTACAAGATAT+GGG - Chr2:15418656-15418675 None:intergenic 30.0%
GAGGTTAACAGTAATAGTAA+TGG + Chr2:15421454-15421473 MsG0280007435.01.T01:CDS 30.0%
GATCTGATCATGTTTGTATT+TGG + Chr2:15418407-15418426 MsG0280007435.01.T01:intron 30.0%
GCTTCCAATTATCTAAACAA+GGG - Chr2:15419350-15419369 None:intergenic 30.0%
GGGAAAAACATATAATGAAG+TGG + Chr2:15420854-15420873 MsG0280007435.01.T01:intron 30.0%
TAAATTGAGATTGTAAGGGA+TGG + Chr2:15419712-15419731 MsG0280007435.01.T01:intron 30.0%
TGAATTCTCATTATAGGACA+AGG + Chr2:15417584-15417603 MsG0280007435.01.T01:intron 30.0%
TGCTTCCAATTATCTAAACA+AGG - Chr2:15419351-15419370 None:intergenic 30.0%
TGCTTGTACAATTATCAACA+GGG - Chr2:15417446-15417465 None:intergenic 30.0%
TTACATGTTAGTTAATAGCC+AGG + Chr2:15418350-15418369 MsG0280007435.01.T01:intron 30.0%
TTAGCAACTTCCTACAATTA+AGG - Chr2:15420758-15420777 None:intergenic 30.0%
TTATGTTATTCTAGTGATGG+GGG + Chr2:15417293-15417312 MsG0280007435.01.T01:five_prime_UTR 30.0%
TTGCTTGTACAATTATCAAC+AGG - Chr2:15417447-15417466 None:intergenic 30.0%
! AACTCTTGAGATTTTCAATG+AGG + Chr2:15417049-15417068 MsG0280007435.01.T01:five_prime_UTR 30.0%
! AATATATGGAAAGCACAATG+AGG + Chr2:15419976-15419995 MsG0280007435.01.T01:intron 30.0%
! AATGCAACTATGTTTTGTGT+TGG + Chr2:15417407-15417426 MsG0280007435.01.T01:intron 30.0%
! CACACTTGAAATTTTCAATG+TGG + Chr2:15421402-15421421 MsG0280007435.01.T01:CDS 30.0%
! CATTGAAAATTTCAAGTGTG+AGG - Chr2:15421402-15421421 None:intergenic 30.0%
! TAATTAGTCACCTTGATTTG+CGG + Chr2:15419789-15419808 MsG0280007435.01.T01:intron 30.0%
! TGGATAGCTTCATCTTTTTA+GGG - Chr2:15418925-15418944 None:intergenic 30.0%
! TTGGATAGCTTCATCTTTTT+AGG - Chr2:15418926-15418945 None:intergenic 30.0%
! TTGTAGTTTGTATATGAAGC+AGG + Chr2:15420630-15420649 MsG0280007435.01.T01:intron 30.0%
!! AGTTGATAAGATTGCACAAA+TGG + Chr2:15418094-15418113 MsG0280007435.01.T01:intron 30.0%
!! CTAAGAGTTTTATCCAAGTT+AGG - Chr2:15421700-15421719 None:intergenic 30.0%
!! GTTTGTTGCCTTTTATCTAT+AGG + Chr2:15420911-15420930 MsG0280007435.01.T01:CDS 30.0%
!! TGACTTGTGACATTTTCTTT+GGG + Chr2:15418505-15418524 MsG0280007435.01.T01:intron 30.0%
!!! AACTTTTTTCAGCTGAAACT+CGG + Chr2:15419161-15419180 MsG0280007435.01.T01:intron 30.0%
!!! ATTCACCTTTGGATTTTTTG+AGG + Chr2:15421626-15421645 MsG0280007435.01.T01:CDS 30.0%
!!! GTTTCTTGTTTTTTGGTCTT+TGG + Chr2:15418464-15418483 MsG0280007435.01.T01:intron 30.0%
!!! TTGACTTGTGACATTTTCTT+TGG + Chr2:15418504-15418523 MsG0280007435.01.T01:intron 30.0%
AAACACTACTTTGCCTTTAC+TGG - Chr2:15418833-15418852 None:intergenic 35.0%
AAGCATAAAAAAGGATCTGC+AGG + Chr2:15419366-15419385 MsG0280007435.01.T01:intron 35.0%
ACAGTGGTTGCAGAATAATT+AGG + Chr2:15418231-15418250 MsG0280007435.01.T01:intron 35.0%
ACTCATTTCAAGGTCTACTT+TGG - Chr2:15419082-15419101 None:intergenic 35.0%
ACTGGTAGTTCCTTAATTGT+AGG + Chr2:15420745-15420764 MsG0280007435.01.T01:intron 35.0%
ACTTACATACACAGTGAAGA+CGG - Chr2:15420148-15420167 None:intergenic 35.0%
AGTTTATGAACGGTGGTTAA+TGG - Chr2:15421163-15421182 None:intergenic 35.0%
ATAAACTCCTCAGAATCACT+TGG + Chr2:15421176-15421195 MsG0280007435.01.T01:CDS 35.0%
ATAACTGCAGGATTTGACAT+CGG + Chr2:15418978-15418997 MsG0280007435.01.T01:intron 35.0%
ATAGATACCTATCTGTTGGA+AGG - Chr2:15418444-15418463 None:intergenic 35.0%
ATCGTGTTTCAATTCACCTT+TGG + Chr2:15421615-15421634 MsG0280007435.01.T01:CDS 35.0%
ATCTATGGTTATTGCATCGT+CGG + Chr2:15417875-15417894 MsG0280007435.01.T01:five_prime_UTR 35.0%
ATTCAATCTGACCTTTGACA+TGG - Chr2:15417569-15417588 None:intergenic 35.0%
ATTTGGAGAAATCTCATGGT+AGG - Chr2:15419568-15419587 None:intergenic 35.0%
CAAAGGAACATTACCAAATG+GGG + Chr2:15420681-15420700 MsG0280007435.01.T01:intron 35.0%
CAAATAACCAAGTGATTCTG+AGG - Chr2:15421186-15421205 None:intergenic 35.0%
CACAAACAAATGTGCATGAA+AGG - Chr2:15420111-15420130 None:intergenic 35.0%
CCATCACTAGAATAACACAA+CGG - Chr2:15421652-15421671 None:intergenic 35.0%
CTGACATCGTTTAACTATCA+AGG - Chr2:15417733-15417752 None:intergenic 35.0%
CTTCAATATGTTCAAGCCAT+GGG + Chr2:15421295-15421314 MsG0280007435.01.T01:CDS 35.0%
GAACAAGTTAGTTGTGTTGA+AGG + Chr2:15417371-15417390 MsG0280007435.01.T01:intron 35.0%
GAATTCTCTTCACTGGATTA+TGG + Chr2:15416977-15416996 MsG0280007435.01.T01:five_prime_UTR 35.0%
GAGTTTCAGCTGAAAAAAGT+TGG - Chr2:15419162-15419181 None:intergenic 35.0%
GATCAACTATACAAAGGAGA+AGG + Chr2:15418068-15418087 MsG0280007435.01.T01:intron 35.0%
GCAAAGGAACATTACCAAAT+GGG + Chr2:15420680-15420699 MsG0280007435.01.T01:intron 35.0%
GCATATTTGGAGAAATCTCA+TGG - Chr2:15419572-15419591 None:intergenic 35.0%
GGTTGTTGCCTATAGATAAA+AGG - Chr2:15420922-15420941 None:intergenic 35.0%
GTAGTTTAACTCCATGTCAA+AGG + Chr2:15417555-15417574 MsG0280007435.01.T01:intron 35.0%
GTGAAGTGGTTAATAGTAGT+CGG + Chr2:15417096-15417115 MsG0280007435.01.T01:five_prime_UTR 35.0%
GTGATAGCAATCTAAGAACA+GGG - Chr2:15420495-15420514 None:intergenic 35.0%
GTTTCAGCTGAAAAAAGTTG+GGG - Chr2:15419160-15419179 None:intergenic 35.0%
GTTTGGGTGATGAAAGAATA+TGG + Chr2:15417194-15417213 MsG0280007435.01.T01:five_prime_UTR 35.0%
TAATAATAGTACTAGGTGGC+TGG + Chr2:15420459-15420478 MsG0280007435.01.T01:intron 35.0%
TAGATACCTATCTGTTGGAA+GGG - Chr2:15418443-15418462 None:intergenic 35.0%
TAGTTGAATCAGTAGCAACA+AGG + Chr2:15420288-15420307 MsG0280007435.01.T01:intron 35.0%
TATGACGATTTCATAACTGC+AGG + Chr2:15418966-15418985 MsG0280007435.01.T01:intron 35.0%
TCCAAAGGTAAATCGAAACA+CGG - Chr2:15417260-15417279 None:intergenic 35.0%
TCTCTTTACATACCATGACA+GGG - Chr2:15419521-15419540 None:intergenic 35.0%
TCTTAGATTGCTATCACCAA+AGG + Chr2:15420498-15420517 MsG0280007435.01.T01:intron 35.0%
TCTTCAATATGTTCAAGCCA+TGG + Chr2:15421294-15421313 MsG0280007435.01.T01:CDS 35.0%
TCTTCACCTTCTAATTCAAC+AGG - Chr2:15421436-15421455 None:intergenic 35.0%
TGAAAATAACAATGGTGCAG+AGG + Chr2:15418276-15418295 MsG0280007435.01.T01:intron 35.0%
TGAAGCTATCCAATCTTCAT+TGG + Chr2:15418933-15418952 MsG0280007435.01.T01:intron 35.0%
TGATAAGATTGCACAAATGG+TGG + Chr2:15418097-15418116 MsG0280007435.01.T01:intron 35.0%
TGCAAAGGAACATTACCAAA+TGG + Chr2:15420679-15420698 MsG0280007435.01.T01:intron 35.0%
TGCAAGGAAAAAAACAAGGA+GGG + Chr2:15420784-15420803 MsG0280007435.01.T01:intron 35.0%
TGTGCATATATGTGATGCAA+AGG + Chr2:15420664-15420683 MsG0280007435.01.T01:intron 35.0%
TGTTGAATTAGAAGGTGAAG+AGG + Chr2:15421435-15421454 MsG0280007435.01.T01:CDS 35.0%
TGTTGAGAATTCTCTTCACT+GGG + Chr2:15416971-15416990 MsG0280007435.01.T01:five_prime_UTR 35.0%
TTATGGCGAAGAAACTTGAT+GGG + Chr2:15421347-15421366 MsG0280007435.01.T01:CDS 35.0%
TTCAATATGTTCAAGCCATG+GGG + Chr2:15421296-15421315 MsG0280007435.01.T01:CDS 35.0%
TTCTCTTTACATACCATGAC+AGG - Chr2:15419522-15419541 None:intergenic 35.0%
TTGCAAGGAAAAAAACAAGG+AGG + Chr2:15420783-15420802 MsG0280007435.01.T01:intron 35.0%
TTGTTGAGAATTCTCTTCAC+TGG + Chr2:15416970-15416989 MsG0280007435.01.T01:five_prime_UTR 35.0%
TTTCTCGTGTTTGATGTGTA+GGG + Chr2:15418783-15418802 MsG0280007435.01.T01:intron 35.0%
! AAAAACAAGGAGGGTACATT+AGG + Chr2:15420793-15420812 MsG0280007435.01.T01:intron 35.0%
! AAGAAACGAGTGTTGTTGAA+CGG + Chr2:15420539-15420558 MsG0280007435.01.T01:intron 35.0%
! ACATTTTCATCCACGTAGAA+AGG - Chr2:15418737-15418756 None:intergenic 35.0%
! AGTTGATCGTGAGCTTTAAT+CGG - Chr2:15419188-15419207 None:intergenic 35.0%
! ATTATGGCTCGGAAATTTGA+TGG + Chr2:15416993-15417012 MsG0280007435.01.T01:five_prime_UTR 35.0%
! CAGTTGAAGAGTATATCTAC+TGG - Chr2:15418540-15418559 None:intergenic 35.0%
! CATTTTCATCCACGTAGAAA+GGG - Chr2:15418736-15418755 None:intergenic 35.0%
! CTAAAAGTGCAATCCGTAAA+AGG + Chr2:15418005-15418024 MsG0280007435.01.T01:CDS 35.0%
! CTTGATAGTTAAACGATGTC+AGG + Chr2:15417731-15417750 MsG0280007435.01.T01:intron 35.0%
! GACTTGTGACATTTTCTTTG+GGG + Chr2:15418506-15418525 MsG0280007435.01.T01:intron 35.0%
! GATTCTGAGGAGTTTATGAA+CGG - Chr2:15421173-15421192 None:intergenic 35.0%
! GTGTGAGCCTAATCTTTTTA+GGG - Chr2:15418879-15418898 None:intergenic 35.0%
! TACTTGTTGATCTATCAGCA+AGG - Chr2:15419034-15419053 None:intergenic 35.0%
! TGAACATATTGAAGAGCGTA+CGG - Chr2:15421289-15421308 None:intergenic 35.0%
! TGTGTGAGCCTAATCTTTTT+AGG - Chr2:15418880-15418899 None:intergenic 35.0%
! TTAGCTTGAAAACAAACTCG+TGG + Chr2:15421245-15421264 MsG0280007435.01.T01:CDS 35.0%
! TTATGGCTCGGAAATTTGAT+GGG + Chr2:15416994-15417013 MsG0280007435.01.T01:five_prime_UTR 35.0%
! TTATTCTAGTGATGGAGGTA+AGG + Chr2:15421657-15421676 MsG0280007435.01.T01:CDS 35.0%
! TTGTGTTATTCTAGTGATGG+AGG + Chr2:15421652-15421671 MsG0280007435.01.T01:CDS 35.0%
! TTTTCTTCTTTCTACAGGGA+TGG + Chr2:15419671-15419690 MsG0280007435.01.T01:intron 35.0%
!! AATGGCCTTGTTTAGAGAAT+TGG + Chr2:15417913-15417932 MsG0280007435.01.T01:exon 35.0%
!! AATTAGTCACCTTGATTTGC+GGG + Chr2:15419790-15419809 MsG0280007435.01.T01:intron 35.0%
!! ATTGGAGGCATTAAAATGCA+TGG + Chr2:15417931-15417950 MsG0280007435.01.T01:CDS 35.0%
!!! AAATTTCGCGTTGCTGTTTT+GGG + Chr2:15421484-15421503 MsG0280007435.01.T01:CDS 35.0%
!!! CTCATTTTTTAAGTCATCCG+AGG + Chr2:15420598-15420617 MsG0280007435.01.T01:intron 35.0%
!!! TAAATTTCGCGTTGCTGTTT+TGG + Chr2:15421483-15421502 MsG0280007435.01.T01:CDS 35.0%
AAAATGTCCTCCCTTTCTAC+GGG + Chr2:15418750-15418769 MsG0280007435.01.T01:intron 40.0%
AAACAACTTCTCCGTCAGAA+AGG - Chr2:15420985-15421004 None:intergenic 40.0%
AAACTCTTAGGAAGCTGGTT+TGG + Chr2:15421710-15421729 MsG0280007435.01.T01:CDS 40.0%
AAAGGCCTCAAGATATCCAA+AGG - Chr2:15417275-15417294 None:intergenic 40.0%
AAAGTAGGGACATCAACACT+TGG - Chr2:15417959-15417978 None:intergenic 40.0%
AAAGTGCAATCCGTAAAAGG+TGG + Chr2:15418008-15418027 MsG0280007435.01.T01:intron 40.0%
AACAACTTCTCCGTCAGAAA+GGG - Chr2:15420984-15421003 None:intergenic 40.0%
AACGGCCTCAAAAAATCCAA+AGG - Chr2:15421634-15421653 None:intergenic 40.0%
AAGGGATGATCAGTTGTTTG+CGG - Chr2:15421057-15421076 None:intergenic 40.0%
AAGGTGAACTGATGGCAAAA+GGG - Chr2:15419015-15419034 None:intergenic 40.0%
AAGTTGCTAAATCGGTTGCA+AGG + Chr2:15420768-15420787 MsG0280007435.01.T01:intron 40.0%
ACAAGATATGGGGTCAGTTA+AGG - Chr2:15418645-15418664 None:intergenic 40.0%
ACCACTGTCTTTATGTTTCG+TGG - Chr2:15418219-15418238 None:intergenic 40.0%
ACCGTGTTTCGATTTACCTT+TGG + Chr2:15417256-15417275 MsG0280007435.01.T01:five_prime_UTR 40.0%
ACTCAGCTCAACTCATTTCA+AGG - Chr2:15419092-15419111 None:intergenic 40.0%
AGATTGCTATCACCAAAGGT+GGG + Chr2:15420502-15420521 MsG0280007435.01.T01:intron 40.0%
ATCCAATCTTCATTGGACAG+TGG + Chr2:15418940-15418959 MsG0280007435.01.T01:intron 40.0%
ATTCTCAACAAAAACCCCCA+TGG - Chr2:15416961-15416980 None:intergenic 40.0%
CATGCTTATGAAACACAGTG+AGG + Chr2:15420060-15420079 MsG0280007435.01.T01:intron 40.0%
CATTGCAACGTTACAAACCT+AGG + Chr2:15418123-15418142 MsG0280007435.01.T01:intron 40.0%
CCAAATATTGTGCCTGAAGT+TGG + Chr2:15420255-15420274 MsG0280007435.01.T01:intron 40.0%
CCAACTTCAGGCACAATATT+TGG - Chr2:15420258-15420277 None:intergenic 40.0%
CCTCTTCCTGTTGAATTAGA+AGG + Chr2:15421427-15421446 MsG0280007435.01.T01:CDS 40.0%
CCTTCTAATTCAACAGGAAG+AGG - Chr2:15421430-15421449 None:intergenic 40.0%
CGGTCAATTTAAACCAGCAA+TGG + Chr2:15417895-15417914 MsG0280007435.01.T01:exon 40.0%
CGGTTGCAAGGAAAAAAACA+AGG + Chr2:15420780-15420799 MsG0280007435.01.T01:intron 40.0%
CTCCTTCGGTAACTAAAGTA+GGG - Chr2:15417973-15417992 None:intergenic 40.0%
CTTACATACACAGTGAAGAC+GGG - Chr2:15420147-15420166 None:intergenic 40.0%
CTTATGAAACACAGTGAGGT+TGG + Chr2:15420064-15420083 MsG0280007435.01.T01:intron 40.0%
CTTTCTCGTGTTTGATGTGT+AGG + Chr2:15418782-15418801 MsG0280007435.01.T01:intron 40.0%
GAAAATGTCCTCCCTTTCTA+CGG + Chr2:15418749-15418768 MsG0280007435.01.T01:intron 40.0%
GAATTCTCTTCACTGGGTTA+TGG + Chr2:15421330-15421349 MsG0280007435.01.T01:CDS 40.0%
GAGTGATAACCAGCAACAAT+AGG - Chr2:15418041-15418060 None:intergenic 40.0%
GGATAAAACTCTTAGGAAGC+TGG + Chr2:15421705-15421724 MsG0280007435.01.T01:CDS 40.0%
GGATAGGAAGAGGGATAAAA+GGG - Chr2:15421075-15421094 None:intergenic 40.0%
GGGAAGATTATCTGCTACAT+TGG + Chr2:15418581-15418600 MsG0280007435.01.T01:intron 40.0%
GGTGATAGCAATCTAAGAAC+AGG - Chr2:15420496-15420515 None:intergenic 40.0%
GTGTTGAAGGAATCCCTAAT+TGG + Chr2:15417384-15417403 MsG0280007435.01.T01:intron 40.0%
GTTATGGCGAAGAAACTTGA+TGG + Chr2:15421346-15421365 MsG0280007435.01.T01:CDS 40.0%
GTTGGAAGCAAATCCTAACT+TGG + Chr2:15421684-15421703 MsG0280007435.01.T01:CDS 40.0%
TAATCGGAGTAGTATTGTGC+TGG - Chr2:15418149-15418168 None:intergenic 40.0%
TACTTGATCTTGCCAACTTC+AGG - Chr2:15420270-15420289 None:intergenic 40.0%
TACTTTAGTTACCGAAGGAG+AGG + Chr2:15417973-15417992 MsG0280007435.01.T01:CDS 40.0%
TAGATTGCTATCACCAAAGG+TGG + Chr2:15420501-15420520 MsG0280007435.01.T01:intron 40.0%
TCAATATGTTCAAGCCATGG+GGG + Chr2:15421297-15421316 MsG0280007435.01.T01:CDS 40.0%
TCCACGAAACATAAAGACAG+TGG + Chr2:15418215-15418234 MsG0280007435.01.T01:intron 40.0%
TCTCCTTCGGTAACTAAAGT+AGG - Chr2:15417974-15417993 None:intergenic 40.0%
TGCCTCCAATTCTCTAAACA+AGG - Chr2:15417921-15417940 None:intergenic 40.0%
TTCCACTGTCCAATGAAGAT+TGG - Chr2:15418945-15418964 None:intergenic 40.0%
TTGAGATTGTAAGGGATGGA+AGG + Chr2:15419716-15419735 MsG0280007435.01.T01:intron 40.0%
TTGATCGTGAGAAGCTGATT+TGG + Chr2:15417333-15417352 MsG0280007435.01.T01:five_prime_UTR 40.0%
TTTATGCCCTTCCAACAGAT+AGG + Chr2:15418434-15418453 MsG0280007435.01.T01:intron 40.0%
! AACACAGTGAGGTTGGTTAT+TGG + Chr2:15420071-15420090 MsG0280007435.01.T01:intron 40.0%
! AGAAACGAGTGTTGTTGAAC+GGG + Chr2:15420540-15420559 MsG0280007435.01.T01:intron 40.0%
! AGGTTTGACACCACCTTTTA+CGG - Chr2:15418021-15418040 None:intergenic 40.0%
! CCGTTGTGTTATTCTAGTGA+TGG + Chr2:15421649-15421668 MsG0280007435.01.T01:CDS 40.0%
! GTTGATCGTGAGCTTTAATC+GGG - Chr2:15419187-15419206 None:intergenic 40.0%
! TATGGCTCGGAAATTTGATG+GGG + Chr2:15416995-15417014 MsG0280007435.01.T01:five_prime_UTR 40.0%
! TTATTCTAGTGATGGGGGTA+AGG + Chr2:15417298-15417317 MsG0280007435.01.T01:five_prime_UTR 40.0%
!! AGCAGAAGCTCCTTTTAGAA+AGG - Chr2:15419928-15419947 None:intergenic 40.0%
!! GTTGTTTTCAAGCACCCTTA+TGG + Chr2:15420998-15421017 MsG0280007435.01.T01:CDS 40.0%
!!! TGGAACTGCACCGATTTTTA+TGG + Chr2:15419834-15419853 MsG0280007435.01.T01:intron 40.0%
!!! TTTTTAAGTCATCCGAGGCT+AGG + Chr2:15420603-15420622 MsG0280007435.01.T01:intron 40.0%
AAATGTCCTCCCTTTCTACG+GGG + Chr2:15418751-15418770 MsG0280007435.01.T01:intron 45.0%
AACTGATGGCAAAAGGGACA+AGG - Chr2:15419009-15419028 None:intergenic 45.0%
ACCTGTTGGAGATCCAGTAA+AGG + Chr2:15418817-15418836 MsG0280007435.01.T01:intron 45.0%
ACTTCACCTCCTATTTCAGC+AGG - Chr2:15417083-15417102 None:intergenic 45.0%
AGGGATGATCAGTTGTTTGC+GGG - Chr2:15421056-15421075 None:intergenic 45.0%
AGTATATGCGTTCACGGCTT+CGG + Chr2:15421130-15421149 MsG0280007435.01.T01:CDS 45.0%
ATACCATGACAGGGTGGAAT+AGG - Chr2:15419512-15419531 None:intergenic 45.0%
ATCAGTTGTTTGCGGGTGTT+AGG - Chr2:15421049-15421068 None:intergenic 45.0%
ATTCCATGAGTGACCCCATT+TGG - Chr2:15420697-15420716 None:intergenic 45.0%
CAAGGTGAACTGATGGCAAA+AGG - Chr2:15419016-15419035 None:intergenic 45.0%
CAATGTCAGGGATAGGAAGA+GGG - Chr2:15421084-15421103 None:intergenic 45.0%
CTATCAGCAAGGTGAACTGA+TGG - Chr2:15419023-15419042 None:intergenic 45.0%
CTCTTCACTGGATTATGGCT+CGG + Chr2:15416982-15417001 MsG0280007435.01.T01:five_prime_UTR 45.0%
CTTCCTATCCCTGACATTGA+GGG + Chr2:15421085-15421104 MsG0280007435.01.T01:CDS 45.0%
CTTTACATACCATGACAGGG+TGG - Chr2:15419518-15419537 None:intergenic 45.0%
GAGTCGAACTTGGTTCATCT+CGG + Chr2:15419108-15419127 MsG0280007435.01.T01:intron 45.0%
GGGATAGGAAGAGGGATAAA+AGG - Chr2:15421076-15421095 None:intergenic 45.0%
GGTGTCAAACCTATTGTTGC+TGG + Chr2:15418029-15418048 MsG0280007435.01.T01:intron 45.0%
GTCCCTACTTTAGTTACCGA+AGG + Chr2:15417968-15417987 MsG0280007435.01.T01:CDS 45.0%
GTGATGTGTCAGCTGAAAGA+TGG + Chr2:15419743-15419762 MsG0280007435.01.T01:intron 45.0%
GTTCCTCTTCCTGCTGAAAT+AGG + Chr2:15417071-15417090 MsG0280007435.01.T01:five_prime_UTR 45.0%
GTTGGAGGGATATGAGTTAG+TGG + Chr2:15420565-15420584 MsG0280007435.01.T01:intron 45.0%
TCAACCTTTCCCGCAAATCA+AGG - Chr2:15419802-15419821 None:intergenic 45.0%
TCAATGTCAGGGATAGGAAG+AGG - Chr2:15421085-15421104 None:intergenic 45.0%
TCAGTTGTTTGCGGGTGTTA+GGG - Chr2:15421048-15421067 None:intergenic 45.0%
TCCAGATTGTGGTTTCGAGA+AGG - Chr2:15421024-15421043 None:intergenic 45.0%
TCTCTAAACAAGGCCATTGC+TGG - Chr2:15417911-15417930 None:intergenic 45.0%
TCTGAGGAGTTTATGAACGG+TGG - Chr2:15421170-15421189 None:intergenic 45.0%
TCTTCCTATCCCTGACATTG+AGG + Chr2:15421084-15421103 MsG0280007435.01.T01:CDS 45.0%
TCTTTCAGCTGACACATCAC+AGG - Chr2:15419743-15419762 None:intergenic 45.0%
TGATCTCGAGAGTGAACGTT+AGG + Chr2:15421735-15421754 MsG0280007435.01.T01:CDS 45.0%
TGATGGAGGTAAGGTTCTGT+TGG + Chr2:15421666-15421685 MsG0280007435.01.T01:CDS 45.0%
TGCATTTCTCCCTTTCTACG+TGG + Chr2:15418724-15418743 MsG0280007435.01.T01:intron 45.0%
TGCTGAAATAGGAGGTGAAG+TGG + Chr2:15417082-15417101 MsG0280007435.01.T01:five_prime_UTR 45.0%
TGGTTTCGAGAAGGCCATAA+GGG - Chr2:15421015-15421034 None:intergenic 45.0%
TGTCAGATCCCTCAATGTCA+GGG - Chr2:15421096-15421115 None:intergenic 45.0%
TTACCAAATGGGGTCACTCA+TGG + Chr2:15420691-15420710 MsG0280007435.01.T01:intron 45.0%
TTGTCAGATCCCTCAATGTC+AGG - Chr2:15421097-15421116 None:intergenic 45.0%
! AACTTGATGGGTCACATCCT+TGG + Chr2:15421359-15421378 MsG0280007435.01.T01:CDS 45.0%
! GAAACGAGTGTTGTTGAACG+GGG + Chr2:15420541-15420560 MsG0280007435.01.T01:intron 45.0%
!! CTCCTTTTAGAAAGGCCAGA+GGG - Chr2:15419920-15419939 None:intergenic 45.0%
!! CTGTGTATGCTGCTGATTTC+TGG + Chr2:15420343-15420362 MsG0280007435.01.T01:intron 45.0%
!! GGCCTTGTTTAGAGAATTGG+AGG + Chr2:15417916-15417935 MsG0280007435.01.T01:CDS 45.0%
AACGCATATACTGCCGCGAT+CGG - Chr2:15421122-15421141 None:intergenic 50.0%
AACTACAACACGCCTAGCCT+CGG - Chr2:15420618-15420637 None:intergenic 50.0%
AGGGATGGCTTCTTGTCCAA+AGG + Chr2:15419686-15419705 MsG0280007435.01.T01:intron 50.0%
AGTACTGCAACCCCGTAGAA+AGG - Chr2:15418764-15418783 None:intergenic 50.0%
CCTCCTATTTCAGCAGGAAG+AGG - Chr2:15417077-15417096 None:intergenic 50.0%
CCTCTTCCTGCTGAAATAGG+AGG + Chr2:15417074-15417093 MsG0280007435.01.T01:five_prime_UTR 50.0%
GAGTTGAGCTGAGTCGAACT+TGG + Chr2:15419098-15419117 MsG0280007435.01.T01:intron 50.0%
GATCCCTCAATGTCAGGGAT+AGG - Chr2:15421091-15421110 None:intergenic 50.0%
GCCTTCTCGAAACCACAATC+TGG + Chr2:15421020-15421039 MsG0280007435.01.T01:CDS 50.0%
GCCTTTACTGGATCTCCAAC+AGG - Chr2:15418821-15418840 None:intergenic 50.0%
GGGCTTCTTCAACAACCTGT+TGG + Chr2:15418803-15418822 MsG0280007435.01.T01:intron 50.0%
GGTGTTAGGGTTCCAGATTG+TGG - Chr2:15421035-15421054 None:intergenic 50.0%
GTACTGCAACCCCGTAGAAA+GGG - Chr2:15418763-15418782 None:intergenic 50.0%
GTGGTTTCGAGAAGGCCATA+AGG - Chr2:15421016-15421035 None:intergenic 50.0%
TACTAGGTGGCTGGTGCATT+GGG + Chr2:15420468-15420487 MsG0280007435.01.T01:intron 50.0%
TGATGAAAGCTCTCTCCCTC+TGG + Chr2:15419902-15419921 MsG0280007435.01.T01:intron 50.0%
TGATGGGGGTAAGGTTCTGT+TGG + Chr2:15417307-15417326 MsG0280007435.01.T01:five_prime_UTR 50.0%
TTGTTGAACGGGGAGTTGGA+GGG + Chr2:15420551-15420570 MsG0280007435.01.T01:intron 50.0%
! AGTGTTGTTGAACGGGGAGT+TGG + Chr2:15420547-15420566 MsG0280007435.01.T01:intron 50.0%
! CTCCCTCTGGCCTTTCTAAA+AGG + Chr2:15419915-15419934 MsG0280007435.01.T01:intron 50.0%
! GAGTAGTATTGTGCTGGCCT+AGG - Chr2:15418143-15418162 None:intergenic 50.0%
! TGAAGAGCGTACGGCATACT+AGG - Chr2:15421280-15421299 None:intergenic 50.0%
!! GCTCCTTTTAGAAAGGCCAG+AGG - Chr2:15419921-15419940 None:intergenic 50.0%
!! GTCACCTTGATTTGCGGGAA+AGG + Chr2:15419795-15419814 MsG0280007435.01.T01:intron 50.0%
!! TAGTCGGAGTTTTGACCTCG+AGG + Chr2:15417112-15417131 MsG0280007435.01.T01:five_prime_UTR 50.0%
!!! GACCTCGAGGTTGCTGTTTT+GGG + Chr2:15417125-15417144 MsG0280007435.01.T01:five_prime_UTR 50.0%
!!! TGACCTCGAGGTTGCTGTTT+TGG + Chr2:15417124-15417143 MsG0280007435.01.T01:five_prime_UTR 50.0%
!!! TTCGCGTTGCTGTTTTGGGT+GGG + Chr2:15421488-15421507 MsG0280007435.01.T01:CDS 50.0%
!!! TTTCGCGTTGCTGTTTTGGG+TGG + Chr2:15421487-15421506 MsG0280007435.01.T01:CDS 50.0%
ACGCATATACTGCCGCGATC+GGG - Chr2:15421121-15421140 None:intergenic 55.0%
AGCAGCTTTCGCCTCTCCTT+CGG - Chr2:15417987-15418006 None:intergenic 55.0%
CGCGGCAGTATATGCGTTCA+CGG + Chr2:15421124-15421143 MsG0280007435.01.T01:CDS 55.0%
CTCCCAAAACAGCAACCTCG+AGG - Chr2:15417130-15417149 None:intergenic 55.0%
GAGCCTATTCCACCCTGTCA+TGG + Chr2:15419506-15419525 MsG0280007435.01.T01:intron 55.0%
GTACTAGGTGGCTGGTGCAT+TGG + Chr2:15420467-15420486 MsG0280007435.01.T01:intron 55.0%
GTTGTTGAACGGGGAGTTGG+AGG + Chr2:15420550-15420569 MsG0280007435.01.T01:intron 55.0%
TGCTATCACCAAAGGTGGGC+TGG + Chr2:15420506-15420525 MsG0280007435.01.T01:intron 55.0%
TTATCACCCCAGCCCACCTT+TGG - Chr2:15420517-15420536 None:intergenic 55.0%
! GCTATCACCAAAGGTGGGCT+GGG + Chr2:15420507-15420526 MsG0280007435.01.T01:intron 55.0%
!! CTATCACCAAAGGTGGGCTG+GGG + Chr2:15420508-15420527 MsG0280007435.01.T01:intron 55.0%
CGCATATACTGCCGCGATCG+GGG - Chr2:15421120-15421139 None:intergenic 60.0%
CTGCAACCCCGTAGAAAGGG+AGG - Chr2:15418760-15418779 None:intergenic 60.0%
CTTCTCCGTCAGAAAGGGCG+AGG - Chr2:15420979-15420998 None:intergenic 60.0%
GGATCTGACAACCCCGATCG+CGG + Chr2:15421106-15421125 MsG0280007435.01.T01:CDS 60.0%
CTCCGTCAGAAAGGGCGAGG+AGG - Chr2:15420976-15420995 None:intergenic 65.0%
GGCCTCCTCGCCCTTTCTGA+CGG + Chr2:15420971-15420990 MsG0280007435.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15416960 15421756 15416960 ID=MsG0280007435.01;Name=MsG0280007435.01
Chr2 mRNA 15416960 15421756 15416960 ID=MsG0280007435.01.T01;Parent=MsG0280007435.01;Name=MsG0280007435.01.T01;_AED=0.48;_eAED=0.66;_QI=468|0|0|1|0.5|0|3|0|324
Chr2 exon 15416960 15417354 15416960 ID=MsG0280007435.01.T01:exon:3323;Parent=MsG0280007435.01.T01
Chr2 exon 15417841 15418026 15417841 ID=MsG0280007435.01.T01:exon:3324;Parent=MsG0280007435.01.T01
Chr2 exon 15420895 15421756 15420895 ID=MsG0280007435.01.T01:exon:3325;Parent=MsG0280007435.01.T01
Chr2 five_prime_UTR 15416960 15417354 15416960 ID=MsG0280007435.01.T01:five_prime_utr;Parent=MsG0280007435.01.T01
Chr2 five_prime_UTR 15417841 15417913 15417841 ID=MsG0280007435.01.T01:five_prime_utr;Parent=MsG0280007435.01.T01
Chr2 CDS 15417914 15418026 15417914 ID=MsG0280007435.01.T01:cds;Parent=MsG0280007435.01.T01
Chr2 CDS 15420895 15421756 15420895 ID=MsG0280007435.01.T01:cds;Parent=MsG0280007435.01.T01
Gene Sequence

>MsG0280007435.01.T01

ATGGCCTTGTTTAGAGAATTGGAGGCATTAAAATGCATGGATCCAAGTGTTGATGTCCCTACTTTAGTTACCGAAGGAGAGGCGAAAGCTGCTAAAAGTGCAATCCGTAAAAGCTATAGGAAGAGAGAAGTTTGTTGCCTTTTATCTATAGGCAACAACCGCACCTTGCCTCTTATTGGTTCATGCAACGGCCTCCTCGCCCTTTCTGACGGAGAAGTTGTTTTCAAGCACCCTTATGGCCTTCTCGAAACCACAATCTGGAACCCTAACACCCGCAAACAACTGATCATCCCTTTTATCCCTCTTCCTATCCCTGACATTGAGGGATCTGACAACCCCGATCGCGGCAGTATATGCGTTCACGGCTTCGGTTTTGATCCATTAACCACCGTTCATAAACTCCTCAGAATCACTTGGTTATTTGCTAGACAAAACATTTTTTATGATTCACATGTCTCATTCTTTAGCTTGAAAACAAACTCGTGGAAAACAATTCCTAGTATGCCGTACGCTCTTCAATATGTTCAAGCCATGGGGGTTTTTGTTGAGAATTCTCTTCACTGGGTTATGGCGAAGAAACTTGATGGGTCACATCCTTGGTTAATTGTTGCATTTAACCTCACACTTGAAATTTTCAATGTGGTTCCTCTTCCTGTTGAATTAGAAGGTGAAGAGGTTAACAGTAATAGTAATGGGAGTTTTAAATTTCGCGTTGCTGTTTTGGGTGGGTGTCTTTGTATGTCTGTGAATTATGAAACTACTAAAATTGATGTTTGGGTGATGAAAGAATATGGTTTTAGAGATAGTTGGTGTAAACTTTTTACTTTGGTTGAATCGTGTTTCAATTCACCTTTGGATTTTTTGAGGCCGTTGTGTTATTCTAGTGATGGAGGTAAGGTTCTGTTGGAAGCAAATCCTAACTTGGATAAAACTCTTAGGAAGCTGGTTTGGTATGATCTCGAGAGTGAACGTTAG

Protein sequence

>MsG0280007435.01.T01

MALFRELEALKCMDPSVDVPTLVTEGEAKAAKSAIRKSYRKREVCCLLSIGNNRTLPLIGSCNGLLALSDGEVVFKHPYGLLETTIWNPNTRKQLIIPFIPLPIPDIEGSDNPDRGSICVHGFGFDPLTTVHKLLRITWLFARQNIFYDSHVSFFSLKTNSWKTIPSMPYALQYVQAMGVFVENSLHWVMAKKLDGSHPWLIVAFNLTLEIFNVVPLPVELEGEEVNSNSNGSFKFRVAVLGGCLCMSVNYETTKIDVWVMKEYGFRDSWCKLFTLVESCFNSPLDFLRPLCYSSDGGKVLLEANPNLDKTLRKLVWYDLESER*