AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043191.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043191.01.T01 MTR_4g014370 67.866 417 119 8 65 473 1 410 0.0 555
MsG0880043191.01.T01 MTR_7g101200 74.439 223 26 2 206 428 36 227 1.19e-115 340
MsG0880043191.01.T01 MTR_0129s0070 42.424 429 196 13 61 472 2 396 3.78e-100 306
MsG0880043191.01.T01 MTR_8g063440 42.823 418 196 9 65 473 1 384 1.67e-98 301
MsG0880043191.01.T01 MTR_0129s0120 41.355 428 200 13 61 471 2 395 3.15e-96 296
MsG0880043191.01.T01 MTR_4g117550 42.043 421 174 13 67 472 8 373 9.50e-95 291
MsG0880043191.01.T01 MTR_0129s0050 40.596 436 197 13 66 471 4 407 4.79e-91 283
MsG0880043191.01.T01 MTR_4g014370 64.078 206 69 3 271 473 135 338 3.40e-87 271
MsG0880043191.01.T01 MTR_4g014370 70.345 145 34 5 57 197 2 141 5.56e-57 192
MsG0880043191.01.T01 MTR_8g464770 42.298 409 194 14 65 466 1 374 1.83e-85 267
MsG0880043191.01.T01 MTR_5g097330 40.662 423 214 12 65 473 5 404 1.05e-84 266
MsG0880043191.01.T01 MTR_3g011120 40.199 403 205 10 63 462 1 370 6.31e-84 263
MsG0880043191.01.T01 MTR_4g102410 40.995 422 210 14 65 470 50 448 7.39e-84 266
MsG0880043191.01.T01 MTR_2g065860 40.610 426 199 17 65 473 1 389 1.08e-82 261
MsG0880043191.01.T01 MTR_2g038680 39.545 440 207 12 61 471 1 410 1.45e-81 258
MsG0880043191.01.T01 MTR_0134s0060 41.149 435 204 14 65 471 1 411 1.48e-81 258
MsG0880043191.01.T01 MTR_2g021950 38.568 433 201 16 61 468 1 393 3.38e-81 257
MsG0880043191.01.T01 MTR_2g021800 37.778 450 210 15 61 473 1 417 6.47e-81 257
MsG0880043191.01.T01 MTR_6g086825 41.920 427 188 16 73 472 67 460 1.08e-80 258
MsG0880043191.01.T01 MTR_0831s0010 38.005 421 200 10 69 471 43 420 1.12e-80 256
MsG0880043191.01.T01 MTR_5g096630 38.761 436 219 13 62 473 4 415 2.88e-80 255
MsG0880043191.01.T01 MTR_6g079770 41.299 431 207 14 68 473 9 418 3.88e-79 252
MsG0880043191.01.T01 MTR_2g066170 38.186 419 217 14 65 473 1 387 3.41e-78 249
MsG0880043191.01.T01 MTR_6g080680 39.709 413 210 14 64 466 6 389 6.61e-78 248
MsG0880043191.01.T01 MTR_2g022000 38.018 434 212 14 61 464 1 407 9.14e-78 249
MsG0880043191.01.T01 MTR_4g130330 42.579 411 200 16 73 471 4 390 1.76e-77 247
MsG0880043191.01.T01 MTR_6g090180 38.425 419 221 11 66 468 37 434 5.91e-77 247
MsG0880043191.01.T01 MTR_2g065840 38.480 421 212 16 65 471 1 388 1.41e-76 245
MsG0880043191.01.T01 MTR_2g021770 37.844 436 216 14 65 473 1 408 2.85e-76 244
MsG0880043191.01.T01 MTR_8g046310 39.078 412 200 13 66 467 3 373 4.81e-76 243
MsG0880043191.01.T01 MTR_5g097220 38.652 445 201 16 61 471 1 407 5.32e-76 244
MsG0880043191.01.T01 MTR_1g007450 40.146 411 200 12 65 458 1 382 1.24e-75 243
MsG0880043191.01.T01 MTR_8g467670 38.861 404 202 12 75 471 13 378 1.53e-75 242
MsG0880043191.01.T01 MTR_6g079810 41.067 431 199 16 69 470 57 461 2.50e-75 244
MsG0880043191.01.T01 MTR_7g017040 39.953 423 198 14 71 472 11 398 2.55e-75 242
MsG0880043191.01.T01 MTR_0054s0090 38.642 427 217 13 64 471 5 405 3.44e-75 242
MsG0880043191.01.T01 MTR_5g097350 39.713 418 207 14 61 468 1 383 4.81e-75 241
MsG0880043191.01.T01 MTR_2g104340 37.788 434 208 13 63 472 1 396 5.34e-74 238
MsG0880043191.01.T01 MTR_2g066200 36.691 417 224 13 65 471 1 387 7.32e-74 238
MsG0880043191.01.T01 MTR_0054s0100 38.173 427 221 13 64 471 5 407 1.20e-73 238
MsG0880043191.01.T01 MTR_7g017130 37.678 422 220 9 64 472 6 397 1.24e-73 238
MsG0880043191.01.T01 MTR_2g104280 37.215 438 214 14 63 472 1 405 1.59e-73 238
MsG0880043191.01.T01 MTR_7g069550 36.364 429 201 15 63 461 1 387 4.76e-73 236
MsG0880043191.01.T01 MTR_4g055820 40.769 390 176 12 63 428 1 359 7.47e-73 234
MsG0880043191.01.T01 MTR_5g097680 39.860 429 222 13 69 472 10 427 1.89e-72 235
MsG0880043191.01.T01 MTR_4g028680 40.047 422 214 16 64 471 3 399 2.51e-72 234
MsG0880043191.01.T01 MTR_8g064890 39.568 417 205 14 69 473 8 389 2.78e-72 234
MsG0880043191.01.T01 MTR_7g017170 36.866 434 219 11 64 472 6 409 1.15e-71 233
MsG0880043191.01.T01 MTR_8g012090 39.744 390 170 12 61 441 1 334 1.40e-71 230
MsG0880043191.01.T01 MTR_4g028510 40.426 423 213 16 64 471 3 401 5.64e-71 233
MsG0880043191.01.T01 MTR_8g041270 37.413 433 208 12 69 472 8 406 3.92e-70 229
MsG0880043191.01.T01 MTR_5g037680 35.904 415 210 12 71 466 3 380 2.81e-69 228
MsG0880043191.01.T01 MTR_8g039500 37.984 387 189 12 65 441 1 346 3.69e-69 224
MsG0880043191.01.T01 MTR_1g007410 37.037 432 204 15 61 464 7 398 4.33e-67 221
MsG0880043191.01.T01 MTR_5g096910 36.620 426 212 17 66 472 7 393 9.23e-67 219
MsG0880043191.01.T01 MTR_8g064790 37.592 407 177 11 69 473 7 338 2.57e-66 216
MsG0880043191.01.T01 MTR_8g033140 37.168 452 212 20 61 473 1 419 4.13e-66 218
MsG0880043191.01.T01 MTR_5g069390 33.886 422 232 12 70 470 20 415 8.08e-66 220
MsG0880043191.01.T01 MTR_2g034700 38.480 408 198 14 68 465 5 369 9.31e-66 216
MsG0880043191.01.T01 MTR_6g478230 37.529 429 202 15 70 473 21 408 2.61e-65 216
MsG0880043191.01.T01 MTR_7g079640 36.318 402 194 16 63 450 1 354 3.38e-65 215
MsG0880043191.01.T01 MTR_5g059430 34.943 435 219 16 70 470 20 424 1.11e-64 215
MsG0880043191.01.T01 MTR_4g028660 37.381 420 221 17 64 468 3 395 2.35e-64 213
MsG0880043191.01.T01 MTR_4g027450 37.381 420 221 17 64 468 3 395 2.35e-64 213
MsG0880043191.01.T01 MTR_4g028750 37.469 403 212 14 61 450 1 376 1.49e-62 209
MsG0880043191.01.T01 MTR_2g066150 35.422 415 208 12 65 473 1 361 3.75e-62 206
MsG0880043191.01.T01 MTR_5g092850 36.854 426 195 19 75 468 15 398 5.30e-62 207
MsG0880043191.01.T01 MTR_8g018110 35.955 445 195 19 66 471 3 396 1.49e-61 206
MsG0880043191.01.T01 MTR_8g046200 35.230 457 199 18 66 467 3 417 2.17e-61 206
MsG0880043191.01.T01 MTR_7g111700 34.977 426 204 11 61 473 1 366 2.19e-61 204
MsG0880043191.01.T01 MTR_5g024260 37.590 415 197 17 63 450 5 384 1.37e-60 204
MsG0880043191.01.T01 MTR_6g461660 35.934 423 220 15 64 468 7 396 2.75e-60 202
MsG0880043191.01.T01 MTR_8g046220 35.730 445 197 17 66 467 3 401 6.40e-60 202
MsG0880043191.01.T01 MTR_8g063370 35.309 388 210 13 80 461 28 380 1.25e-59 201
MsG0880043191.01.T01 MTR_8g013000 36.598 388 181 15 67 427 1 350 1.47e-59 201
MsG0880043191.01.T01 MTR_2g064950 35.610 410 188 17 67 446 1 364 2.75e-59 200
MsG0880043191.01.T01 MTR_5g091140 35.872 407 194 15 65 451 37 396 3.69e-59 200
MsG0880043191.01.T01 MTR_1g050308 34.541 414 180 12 64 473 22 348 5.14e-59 198
MsG0880043191.01.T01 MTR_1g098180 34.129 419 191 12 70 469 11 363 5.60e-59 198
MsG0880043191.01.T01 MTR_1g053510 35.491 448 199 20 63 467 1 401 6.91e-59 199
MsG0880043191.01.T01 MTR_8g063330 35.233 386 189 13 65 427 1 348 1.46e-58 200
MsG0880043191.01.T01 MTR_1g007430 39.718 355 156 13 87 425 7 319 2.42e-58 195
MsG0880043191.01.T01 MTR_7g016930 40.988 344 144 11 70 403 10 304 8.02e-58 194
MsG0880043191.01.T01 MTR_8g033090 35.698 451 210 18 63 472 1 412 2.98e-57 195
MsG0880043191.01.T01 MTR_6g090250 35.784 408 211 16 94 467 29 419 4.61e-57 195
MsG0880043191.01.T01 MTR_4g007940 35.447 347 161 9 151 469 28 339 2.89e-56 190
MsG0880043191.01.T01 MTR_8g036970 34.974 386 171 12 80 459 2 313 3.07e-56 191
MsG0880043191.01.T01 MTR_5g074850 36.038 419 201 19 61 449 20 401 6.00e-56 200
MsG0880043191.01.T01 MTR_6g078010 36.813 364 185 13 112 467 4 330 7.56e-55 187
MsG0880043191.01.T01 MTR_8g032980 33.693 463 206 17 63 469 1 418 1.18e-54 188
MsG0880043191.01.T01 MTR_8g033110 33.040 454 221 17 63 472 1 415 1.02e-53 186
MsG0880043191.01.T01 MTR_5g072060 35.236 403 173 16 74 447 4 347 1.73e-53 190
MsG0880043191.01.T01 MTR_5g064700 36.528 386 199 16 115 472 1 368 1.32e-52 181
MsG0880043191.01.T01 MTR_8g063350 31.841 402 194 13 68 461 6 335 2.52e-52 180
MsG0880043191.01.T01 MTR_8g063310 30.549 419 226 14 68 464 14 389 6.78e-52 181
MsG0880043191.01.T01 MTR_5g075370 35.961 406 198 18 73 449 5 377 7.46e-52 187
MsG0880043191.01.T01 MTR_6g079790 37.278 338 156 12 163 473 2 310 5.06e-51 176
MsG0880043191.01.T01 MTR_5g022850 33.333 429 193 16 61 472 1 353 2.91e-48 169
MsG0880043191.01.T01 MTR_2g021920 42.194 237 111 9 254 468 37 269 1.50e-45 160
MsG0880043191.01.T01 MTR_5g043605 36.025 322 166 13 157 471 50 338 9.35e-44 158
MsG0880043191.01.T01 MTR_1g050312 34.056 323 153 9 151 464 16 287 7.46e-43 153
MsG0880043191.01.T01 MTR_6g004450 37.500 232 127 5 250 471 45 268 9.50e-43 152
MsG0880043191.01.T01 MTR_5g068490 35.443 316 153 12 160 471 8 276 9.98e-43 152
MsG0880043191.01.T01 MTR_5g096900 35.792 366 164 16 65 405 1 320 2.18e-42 153
MsG0880043191.01.T01 MTR_6g087620 33.127 323 159 11 151 461 1 278 6.60e-41 148
MsG0880043191.01.T01 MTR_5g023970 44.792 192 97 5 287 473 10 197 1.55e-40 144
MsG0880043191.01.T01 MTR_6g465360 43.388 242 104 9 44 270 18 241 4.58e-40 146
MsG0880043191.01.T01 MTR_5g074800 32.817 387 182 19 115 471 1 339 1.02e-39 146
MsG0880043191.01.T01 MTR_7g104710 34.328 335 149 9 68 388 9 286 1.66e-39 145
MsG0880043191.01.T01 MTR_5g092860 30.266 413 202 15 56 449 5 350 3.52e-39 145
MsG0880043191.01.T01 MTR_2g104260 36.570 309 144 12 63 352 1 276 8.98e-39 142
MsG0880043191.01.T01 MTR_7g023800 34.211 342 164 11 128 463 16 302 1.06e-38 143
MsG0880043191.01.T01 MTR_5g094350 37.000 300 138 11 72 357 9 271 1.07e-38 142
MsG0880043191.01.T01 MTR_1g076810 37.736 265 118 12 68 321 10 238 4.09e-38 147
MsG0880043191.01.T01 MTR_5g037190 36.271 295 135 9 61 347 1 250 5.41e-38 139
MsG0880043191.01.T01 MTR_8g073570 42.211 199 86 6 67 265 1 170 6.68e-38 136
MsG0880043191.01.T01 MTR_5g076490 32.905 389 179 15 113 472 1 336 1.00e-36 138
MsG0880043191.01.T01 MTR_8g033000 30.380 395 208 14 113 472 1 363 1.53e-35 135
MsG0880043191.01.T01 MTR_6g070880 35.060 251 130 8 71 307 27 258 2.53e-34 129
MsG0880043191.01.T01 MTR_6g071420 35.060 251 130 8 71 307 27 258 2.53e-34 129
MsG0880043191.01.T01 MTR_6g090260 40.741 189 99 6 288 467 75 259 9.76e-34 128
MsG0880043191.01.T01 MTR_5g086590 36.179 246 123 10 207 444 12 231 1.51e-33 127
MsG0880043191.01.T01 MTR_3g018750 36.032 247 124 10 253 472 2 241 2.70e-33 126
MsG0880043191.01.T01 MTR_5g097850 39.896 193 95 6 293 473 63 246 6.94e-33 125
MsG0880043191.01.T01 MTR_5g097820 32.281 285 156 8 68 345 15 269 2.52e-32 124
MsG0880043191.01.T01 MTR_0064s0160 28.878 419 229 20 75 466 41 417 3.94e-32 127
MsG0880043191.01.T01 MTR_4g016000 31.646 237 113 9 213 435 2 203 9.61e-27 107
MsG0880043191.01.T01 MTR_8g035690 32.986 288 132 12 233 471 27 302 1.02e-26 110
MsG0880043191.01.T01 MTR_7g019250 34.483 232 108 9 237 449 207 413 1.36e-26 112
MsG0880043191.01.T01 MTR_5g098950 34.426 244 108 9 191 427 73 271 5.03e-26 107
MsG0880043191.01.T01 MTR_5g097650 40.764 157 71 4 73 229 19 153 3.04e-25 101
MsG0880043191.01.T01 MTR_6g079730 42.857 147 77 4 326 467 1 145 6.24e-25 100
MsG0880043191.01.T01 MTR_6g009350 36.458 192 104 7 255 434 9 194 3.74e-24 100
MsG0880043191.01.T01 MTR_4g023080 27.053 414 224 18 69 470 2 349 1.29e-23 102
MsG0880043191.01.T01 MTR_1g115205 33.208 265 110 12 76 330 29 236 2.03e-23 99.4
MsG0880043191.01.T01 MTR_5g096920 39.333 150 85 4 325 470 3 150 2.60e-23 96.3
MsG0880043191.01.T01 MTR_1g047080 30.376 372 156 19 113 471 1 282 3.22e-23 99.8
MsG0880043191.01.T01 MTR_3g019290 30.973 226 89 5 65 288 1 161 7.30e-23 95.9
MsG0880043191.01.T01 MTR_1g068835 26.359 368 212 15 76 433 4 322 8.13e-23 100
MsG0880043191.01.T01 MTR_3g034130 25.907 386 236 14 69 445 2 346 1.20e-22 99.8
MsG0880043191.01.T01 MTR_2g022020 48.039 102 50 2 368 468 17 116 4.98e-22 91.7
MsG0880043191.01.T01 MTR_5g066420 36.735 147 83 3 325 461 3 149 1.76e-21 90.9
MsG0880043191.01.T01 MTR_2g021252 27.747 364 185 16 79 434 50 343 2.47e-21 95.9
MsG0880043191.01.T01 MTR_3g030620 37.975 158 84 7 325 470 25 180 4.09e-21 90.9
MsG0880043191.01.T01 MTR_4g023090 27.209 430 226 21 69 470 9 379 1.15e-20 94.0
MsG0880043191.01.T01 MTR_4g094365 24.818 411 238 15 75 470 7 361 1.29e-20 93.6
MsG0880043191.01.T01 MTR_3g034160 25.728 412 253 15 69 470 2 370 1.36e-20 93.6
MsG0880043191.01.T01 MTR_4g030830 24.524 420 225 17 76 453 9 378 1.42e-20 94.0
MsG0880043191.01.T01 MTR_5g096070 37.500 160 50 6 70 223 20 135 2.89e-20 87.8
MsG0880043191.01.T01 MTR_5g036250 52.564 78 36 1 387 464 27 103 3.11e-20 88.6
MsG0880043191.01.T01 MTR_5g057790 26.554 354 179 18 76 412 46 335 3.96e-20 92.4
MsG0880043191.01.T01 MTR_4g117780 25.495 404 240 15 76 470 11 362 4.67e-20 92.0
MsG0880043191.01.T01 MTR_5g057710 26.000 350 186 17 76 412 46 335 1.10e-19 91.3
MsG0880043191.01.T01 MTR_4g021785 25.428 409 238 16 69 470 2 350 1.16e-19 90.5
MsG0880043191.01.T01 MTR_3g034180 24.396 414 256 17 69 470 116 484 2.48e-19 90.9
MsG0880043191.01.T01 MTR_3g009310 26.648 364 191 17 63 408 22 327 6.28e-19 89.0
MsG0880043191.01.T01 MTR_4g116330 24.356 427 251 15 60 470 5 375 1.01e-18 88.2
MsG0880043191.01.T01 MTR_2g021150 26.648 364 211 14 75 428 13 330 1.75e-18 87.4
MsG0880043191.01.T01 MTR_2g028160 26.230 366 220 15 76 423 5 338 2.27e-18 87.4
MsG0880043191.01.T01 MTR_3g007410 25.595 336 185 16 83 408 59 339 2.72e-18 87.0
MsG0880043191.01.T01 MTR_4g109270 24.938 401 246 13 76 470 8 359 2.86e-18 86.7
MsG0880043191.01.T01 MTR_3g007360 25.680 331 191 14 83 408 59 339 3.65e-18 86.7
MsG0880043191.01.T01 MTR_3g047580 34.194 155 67 3 69 222 7 127 4.25e-18 80.9
MsG0880043191.01.T01 MTR_5g070080 25.845 414 247 16 75 470 9 380 6.34e-18 85.9
MsG0880043191.01.T01 MTR_5g057690 25.513 341 189 13 76 412 46 325 7.34e-18 85.5
MsG0880043191.01.T01 MTR_3g058440 29.836 305 155 17 76 372 35 288 1.02e-17 84.3
MsG0880043191.01.T01 MTR_3g103020 24.198 405 248 14 75 470 19 373 1.22e-17 84.7
MsG0880043191.01.T01 MTR_5g097210 24.010 404 254 12 69 468 2 356 1.34e-17 84.7
MsG0880043191.01.T01 MTR_4g023120 24.524 420 235 16 76 470 3 365 1.43e-17 84.7
MsG0880043191.01.T01 MTR_2g031720 25.260 384 213 18 72 434 1 331 1.93e-17 84.3
MsG0880043191.01.T01 MTR_2g425980 23.961 409 257 13 76 467 5 376 2.01e-17 84.7
MsG0880043191.01.T01 MTR_3g083010 23.615 343 224 11 76 407 6 321 2.20e-17 84.3
MsG0880043191.01.T01 MTR_1g068875 25.490 408 231 19 76 467 4 354 2.81e-17 84.0
MsG0880043191.01.T01 MTR_7g017150 32.821 195 116 7 285 471 79 266 3.48e-17 82.0
MsG0880043191.01.T01 MTR_2g078900 23.161 367 211 13 76 434 33 336 3.85e-17 83.2
MsG0880043191.01.T01 MTR_2g029990 25.937 347 181 16 77 407 52 338 5.88e-17 83.2
MsG0880043191.01.T01 MTR_7g061060 25.118 422 235 15 67 456 4 376 8.89e-17 82.4
MsG0880043191.01.T01 MTR_5g027330 24.179 335 203 11 83 405 47 342 1.02e-16 82.8
MsG0880043191.01.T01 MTR_5g027370 24.179 335 203 11 83 405 36 331 1.20e-16 82.4
MsG0880043191.01.T01 MTR_7g017120 32.308 195 117 7 285 471 78 265 1.37e-16 80.1
MsG0880043191.01.T01 MTR_4g023190 26.366 421 226 19 67 470 1 354 1.55e-16 81.3
MsG0880043191.01.T01 MTR_5g097660 41.748 103 58 2 368 468 14 116 1.56e-16 76.3
MsG0880043191.01.T01 MTR_5g057020 24.927 341 186 13 76 412 46 320 1.90e-16 80.9
MsG0880043191.01.T01 MTR_4g117770 25.679 405 240 17 75 470 10 362 1.90e-16 81.3
MsG0880043191.01.T01 MTR_4g117810 25.679 405 240 17 75 470 10 362 1.90e-16 81.3
MsG0880043191.01.T01 MTR_0044s0300 23.784 370 206 18 76 434 38 342 1.91e-16 81.3
MsG0880043191.01.T01 MTR_4g030760 25.369 406 224 17 70 453 67 415 2.25e-16 81.6
MsG0880043191.01.T01 MTR_3g030330 25.806 341 180 15 76 407 20 296 2.30e-16 80.9
MsG0880043191.01.T01 MTR_8g062660 25.203 369 210 17 76 433 22 335 2.51e-16 82.0
MsG0880043191.01.T01 MTR_4g055060 27.666 347 191 17 76 412 30 326 2.63e-16 80.9
MsG0880043191.01.T01 MTR_3g013740 25.935 401 221 20 34 412 1 347 2.69e-16 81.3
MsG0880043191.01.T01 MTR_2g046900 25.121 414 231 18 75 466 27 383 2.79e-16 80.9
MsG0880043191.01.T01 MTR_3g014570 26.023 342 190 14 76 408 29 316 2.81e-16 80.9
MsG0880043191.01.T01 MTR_3g009240 23.836 365 219 14 76 433 36 348 3.45e-16 80.5
MsG0880043191.01.T01 MTR_4g024890 25.263 380 213 15 75 428 9 343 8.04e-16 79.3
MsG0880043191.01.T01 MTR_5g086780 39.850 133 67 5 328 448 97 228 9.38e-16 77.0
MsG0880043191.01.T01 MTR_5g086780 60.714 56 22 0 61 116 1 56 2.05e-13 70.1
MsG0880043191.01.T01 MTR_1g068860 25.532 376 207 16 76 433 4 324 9.75e-16 79.0
MsG0880043191.01.T01 MTR_7g013590 25.000 416 233 20 79 472 39 397 1.31e-15 79.0
MsG0880043191.01.T01 MTR_2g426070 23.989 371 245 14 72 433 2 344 1.93e-15 78.6
MsG0880043191.01.T01 MTR_2g028110 24.416 385 229 16 76 447 4 339 2.13e-15 78.2
MsG0880043191.01.T01 MTR_0115s0020 23.310 429 250 19 76 468 10 395 2.42e-15 78.2
MsG0880043191.01.T01 MTR_0667s0010 24.438 356 198 15 72 407 2 306 2.85e-15 77.8
MsG0880043191.01.T01 MTR_3g058480 31.148 244 112 13 76 306 39 239 2.85e-15 77.4
MsG0880043191.01.T01 MTR_6g065980 22.663 353 200 12 61 407 1 286 3.73e-15 77.0
MsG0880043191.01.T01 MTR_8g013010 25.694 288 159 11 75 356 53 291 3.78e-15 76.6
MsG0880043191.01.T01 MTR_3g436150 26.757 370 206 18 76 426 32 355 3.88e-15 77.4
MsG0880043191.01.T01 MTR_4g023150 25.352 426 225 19 67 470 1 355 4.71e-15 77.0
MsG0880043191.01.T01 MTR_4g023070 24.228 421 235 18 76 470 3 365 4.93e-15 77.0
MsG0880043191.01.T01 MTR_2g028130 24.462 372 217 16 76 423 5 336 5.91e-15 77.0
MsG0880043191.01.T01 MTR_4g117850 23.529 408 244 17 75 469 22 374 8.38e-15 76.3
MsG0880043191.01.T01 MTR_5g097540 32.903 155 88 6 287 434 96 241 1.03e-14 75.1
MsG0880043191.01.T01 MTR_7g101220 75.000 44 11 0 400 443 91 134 1.06e-14 72.0
MsG0880043191.01.T01 MTR_3g014540 26.286 350 195 16 76 416 29 324 1.08e-14 75.9
MsG0880043191.01.T01 MTR_2g026010 26.332 319 181 15 140 433 39 328 1.27e-14 75.9
MsG0880043191.01.T01 MTR_2g046830 24.745 392 230 18 75 453 24 363 1.87e-14 75.5
MsG0880043191.01.T01 MTR_1g055070 25.517 290 187 8 69 357 42 303 1.96e-14 75.1
MsG0880043191.01.T01 MTR_2g078850 21.763 363 218 12 79 434 33 336 2.07e-14 75.1
MsG0880043191.01.T01 MTR_7g070830 25.874 429 233 20 68 450 13 402 2.74e-14 75.1
MsG0880043191.01.T01 MTR_6g048120 26.667 375 204 18 76 435 36 354 2.88e-14 74.7
MsG0880043191.01.T01 MTR_7g061050 23.888 427 250 15 67 466 4 382 3.49e-14 74.3
MsG0880043191.01.T01 MTR_1g055135 23.775 408 246 16 75 468 12 368 4.46e-14 73.9
MsG0880043191.01.T01 MTR_3g010590 25.075 335 185 14 76 407 39 310 4.73e-14 73.9
MsG0880043191.01.T01 MTR_3g006570 22.922 397 228 17 76 463 21 348 5.26e-14 73.9
MsG0880043191.01.T01 MTR_3g058470 24.865 370 180 18 76 426 37 327 7.64e-14 73.2
MsG0880043191.01.T01 MTR_8g041440 38.889 108 44 2 61 168 1 86 8.07e-14 68.2
MsG0880043191.01.T01 MTR_3g036335 24.507 355 201 17 64 408 30 327 9.34e-14 73.2
MsG0880043191.01.T01 MTR_8g073550 26.613 248 123 10 75 313 29 226 9.68e-14 71.2
MsG0880043191.01.T01 MTR_7g062100 25.000 416 243 17 76 466 24 395 9.93e-14 73.2
MsG0880043191.01.T01 MTR_6g060650 24.384 406 259 15 70 468 2 366 1.22e-13 72.8
MsG0880043191.01.T01 MTR_2g426090 25.479 365 222 17 83 433 13 341 1.26e-13 72.8
MsG0880043191.01.T01 MTR_4g117750 25.182 413 228 15 75 468 2 352 1.63e-13 72.8
MsG0880043191.01.T01 MTR_2g024110 23.977 342 196 11 76 406 4 292 1.65e-13 72.4
MsG0880043191.01.T01 MTR_0128s0020 24.408 422 245 15 76 468 18 394 1.69e-13 72.4
MsG0880043191.01.T01 MTR_2g461450 23.716 409 202 19 76 447 18 353 1.87e-13 72.0
MsG0880043191.01.T01 MTR_3g013770 26.667 360 195 17 76 421 33 337 3.27e-13 71.6
MsG0880043191.01.T01 MTR_5g091150 30.328 244 82 13 163 379 2 184 3.61e-13 68.6
MsG0880043191.01.T01 MTR_0128s0010 23.659 410 246 15 83 466 28 396 3.98e-13 71.2
MsG0880043191.01.T01 MTR_7g061090 23.352 364 201 12 75 408 21 336 4.13e-13 71.2
MsG0880043191.01.T01 MTR_7g070440 24.528 424 227 21 75 467 6 367 5.81e-13 70.5
MsG0880043191.01.T01 MTR_2g021050 23.077 377 203 12 76 431 5 315 6.08e-13 70.5
MsG0880043191.01.T01 MTR_2g025960 26.754 228 150 8 182 407 3 215 7.64e-13 69.7
MsG0880043191.01.T01 MTR_2g024100 24.294 354 203 13 91 423 22 331 1.02e-12 70.1
MsG0880043191.01.T01 MTR_5g070130 24.286 420 246 18 68 468 3 369 1.11e-12 69.7
MsG0880043191.01.T01 MTR_2g021155 23.724 392 228 19 79 455 39 374 1.16e-12 70.9
MsG0880043191.01.T01 MTR_5g046300 24.207 347 183 15 76 408 4 284 1.65e-12 68.9
MsG0880043191.01.T01 MTR_5g046290 24.207 347 183 15 76 408 4 284 1.65e-12 68.9
MsG0880043191.01.T01 MTR_3g011100 25.291 344 194 14 76 408 235 526 2.81e-12 69.3
MsG0880043191.01.T01 MTR_2g025420 23.698 384 245 15 72 436 2 356 3.25e-12 68.6
MsG0880043191.01.T01 MTR_4g019990 23.131 428 254 17 72 466 2 387 3.54e-12 68.2
MsG0880043191.01.T01 MTR_1g054725 24.576 354 186 16 74 407 18 310 3.81e-12 68.2
MsG0880043191.01.T01 MTR_5g007610 22.515 342 209 12 76 407 41 336 4.24e-12 68.2
MsG0880043191.01.T01 MTR_5g049560 34.337 166 81 7 113 269 1 147 4.50e-12 66.6
MsG0880043191.01.T01 MTR_4g023130 24.815 270 157 9 209 470 77 308 4.65e-12 67.4
MsG0880043191.01.T01 MTR_4g023200 26.168 428 219 19 67 470 1 355 5.37e-12 67.4
MsG0880043191.01.T01 MTR_1g050305 49.231 65 30 1 389 450 39 103 8.50e-12 63.2
MsG0880043191.01.T01 MTR_3g011060 25.656 343 198 16 76 407 28 324 8.94e-12 67.0
MsG0880043191.01.T01 MTR_6g087660 46.154 78 41 1 64 140 6 83 9.17e-12 64.3
MsG0880043191.01.T01 MTR_7g022600 24.408 422 250 20 83 466 30 420 1.27e-11 66.6
MsG0880043191.01.T01 MTR_6g007150 27.039 233 112 12 189 406 75 264 1.35e-11 66.2
MsG0880043191.01.T01 MTR_6g053260 24.860 358 183 16 76 412 337 629 1.44e-11 67.4
MsG0880043191.01.T01 MTR_2g426060 23.961 409 256 16 76 467 6 376 2.17e-11 65.9
MsG0880043191.01.T01 MTR_5g056990 28.485 165 95 7 253 412 34 180 3.05e-11 63.9
MsG0880043191.01.T01 MTR_5g096050 39.216 102 46 4 325 410 3 104 3.33e-11 60.8
MsG0880043191.01.T01 MTR_6g007135 24.194 372 210 17 79 433 29 345 3.44e-11 65.1
MsG0880043191.01.T01 MTR_3g010970 23.615 343 185 13 79 412 51 325 3.49e-11 65.1
MsG0880043191.01.T01 MTR_6g053240 24.713 348 191 16 76 407 28 320 4.66e-11 65.1
MsG0880043191.01.T01 MTR_4g080200 25.260 289 163 12 79 365 6 243 6.24e-11 64.3
MsG0880043191.01.T01 MTR_4g109280 22.161 361 212 11 75 425 7 308 8.58e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043191.01.T01 AT3G06240 25.310 403 237 13 76 451 36 401 3.24e-23 102
MsG0880043191.01.T01 AT3G16210 23.392 342 185 13 72 408 1 270 2.27e-19 89.7
MsG0880043191.01.T01 AT3G23880 22.667 375 225 11 76 440 14 333 3.98e-13 71.2

Find 89 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTCTTCATATCAATTT+TGG 0.099674 8:+20350972 MsG0880043191.01.T01:CDS
TTACATGTGTATGTAAATTT+TGG 0.112266 8:+20350104 MsG0880043191.01.T01:CDS
TAGCAAATTTATCATAATTT+TGG 0.148242 8:-20350894 None:intergenic
TGGGGTTACGAAGATTATTT+TGG 0.177218 8:+20350805 MsG0880043191.01.T01:CDS
ATTGAAAAGGTTGGTGTTAA+AGG 0.179871 8:+20351147 MsG0880043191.01.T01:CDS
TTGCAGATTTAAGCAATTAA+TGG 0.197676 8:+20349383 MsG0880043191.01.T01:intron
GTCCAAATGATCAGACTTTA+TGG 0.212730 8:+20350659 MsG0880043191.01.T01:CDS
CTTCAGGACTTAGCCTTTAC+TGG 0.242896 8:+20348976 MsG0880043191.01.T01:five_prime_UTR
GAGAGATTTCTTGGGCAATT+TGG 0.271146 8:-20350074 None:intergenic
ACTTTGAATTCCTGTGTATA+TGG 0.277535 8:-20350457 None:intergenic
TTTGTTAACATTCATGGTTT+TGG 0.289029 8:+20350565 MsG0880043191.01.T01:CDS
AAATCTCTTGAGAGATTTCT+TGG 0.301437 8:-20350083 None:intergenic
CGGTTCCAGTTCTCTTCAAA+TGG 0.323803 8:-20350325 None:intergenic
CCAATAGGTTCCACCACTTC+TGG 0.325019 8:-20351048 None:intergenic
ACTCACGAAGATAGATGATT+TGG 0.338296 8:-20349534 None:intergenic
TTTGCTCTATCAGTTCCTTC+AGG 0.343099 8:+20348960 MsG0880043191.01.T01:five_prime_UTR
TGCCATAAAGTCTGATCATT+TGG 0.345721 8:-20350661 None:intergenic
TCCATTGCTATGATCGAGTA+TGG 0.348627 8:+20350940 MsG0880043191.01.T01:CDS
CCGTTATACCGTGAATGATT+TGG 0.352858 8:-20350733 None:intergenic
GGTTATTCAGTGAACTTTCA+TGG 0.355474 8:+20350769 MsG0880043191.01.T01:CDS
ATTGTTGGTTCTGTTGTTCA+TGG 0.359215 8:+20350361 MsG0880043191.01.T01:CDS
GCAAAATAACCAATCACTAA+TGG 0.368557 8:-20348942 None:intergenic
CCATTCTTCGCAACTCCAAT+AGG 0.380367 8:-20351063 None:intergenic
CTCTATCAAGGCAATGGAAA+TGG 0.392029 8:+20350394 MsG0880043191.01.T01:CDS
TCATGGGATGTGTCATTGGT+GGG 0.393030 8:+20350786 MsG0880043191.01.T01:CDS
TTAACAAAAGTAGGTGTAAG+AGG 0.394152 8:-20350550 None:intergenic
CCAGAAGTGGTGGAACCTAT+TGG 0.399917 8:+20351048 MsG0880043191.01.T01:CDS
AGAATAGCGTCAAGTTAGAT+TGG 0.415210 8:+20350296 MsG0880043191.01.T01:CDS
AAGGTCCTTCCATTAGTGAT+TGG 0.421912 8:+20348933 MsG0880043191.01.T01:five_prime_UTR
ATTATTATCATCATGGTCTT+CGG 0.432276 8:-20350242 None:intergenic
ACTTTCATGGGATGTGTCAT+TGG 0.436653 8:+20350782 MsG0880043191.01.T01:CDS
CCTATTGGAGTTGCGAAGAA+TGG 0.440197 8:+20351063 MsG0880043191.01.T01:CDS
CAAATCATTCACGGTATAAC+GGG 0.443122 8:+20350734 MsG0880043191.01.T01:CDS
CTATTGGAGTTGCGAAGAAT+GGG 0.447090 8:+20351064 MsG0880043191.01.T01:CDS
CACCTCCATTTGAAGAGAAC+TGG 0.451146 8:+20350320 MsG0880043191.01.T01:CDS
CCAAATCATTCACGGTATAA+CGG 0.456530 8:+20350733 MsG0880043191.01.T01:CDS
TTCATGGGATGTGTCATTGG+TGG 0.460844 8:+20350785 MsG0880043191.01.T01:CDS
TTACGTGTGCTTACCAGTAA+AGG 0.465529 8:-20348989 None:intergenic
TGTTTGTATGCAATTATCAA+TGG 0.466805 8:+20349991 MsG0880043191.01.T01:CDS
AATCTCTTGAGAGATTTCTT+GGG 0.486970 8:-20350082 None:intergenic
TAGGTTCCACCACTTCTGGC+AGG 0.490563 8:-20351044 None:intergenic
GGCATAATTTGTCTCTATCA+AGG 0.492798 8:+20350382 MsG0880043191.01.T01:CDS
TAACTATGTATTCCTCCGAT+TGG 0.493306 8:-20351216 None:intergenic
GAGTACCGATATGATTGAAA+AGG 0.494526 8:+20351134 MsG0880043191.01.T01:CDS
AATGAAAGTCTTCTTCCAAT+CGG 0.496190 8:+20351201 MsG0880043191.01.T01:CDS
ATTCTCAAAGCCTTTCCTCC+TGG 0.501198 8:+20350508 MsG0880043191.01.T01:CDS
AAAAGGTTGGTGTTAAAGGA+AGG 0.501978 8:+20351151 MsG0880043191.01.T01:CDS
ACTAGAGAACTCTTCACATT+GGG 0.503188 8:-20348903 None:intergenic
GTTATTCAGTGAACTTTCAT+GGG 0.505986 8:+20350770 MsG0880043191.01.T01:CDS
AAGGCATGAATGTTGTCAAA+TGG 0.506538 8:+20351170 MsG0880043191.01.T01:CDS
TTGAAATGCCAAATCATTCA+CGG 0.509218 8:+20350725 MsG0880043191.01.T01:CDS
CATGGGATGTGTCATTGGTG+GGG 0.512714 8:+20350787 MsG0880043191.01.T01:CDS
CTTCTATTGTAGCATAACAT+TGG 0.515732 8:+20349955 MsG0880043191.01.T01:intron
AAATGATCAGACTTTATGGC+AGG 0.518465 8:+20350663 MsG0880043191.01.T01:CDS
TGATAAATTTGCTAAACACT+TGG 0.522063 8:+20350903 MsG0880043191.01.T01:CDS
AAGCAGGAGTCTTCTTTAGG+AGG 0.534597 8:-20350216 None:intergenic
ATATATAATTATTATCATCA+TGG 0.534630 8:-20350249 None:intergenic
ATTTGTCTCTATCAAGGCAA+TGG 0.537183 8:+20350388 MsG0880043191.01.T01:CDS
GACTAGAGAACTCTTCACAT+TGG 0.538235 8:-20348904 None:intergenic
TAACAAAAGTAGGTGTAAGA+GGG 0.546342 8:-20350549 None:intergenic
CAGTTCTCTTCAAATGGAGG+TGG 0.548919 8:-20350319 None:intergenic
AGGTTCCACCACTTCTGGCA+GGG 0.548991 8:-20351043 None:intergenic
TAAGCAATTAATGGAGCAAG+AGG 0.550192 8:+20349392 MsG0880043191.01.T01:exon
AATTTGGTGTGGCAGACTCA+TGG 0.551909 8:+20350998 MsG0880043191.01.T01:CDS
TGGACCCCTGCCAGAAGTGG+TGG 0.552482 8:+20351038 MsG0880043191.01.T01:CDS
CCATGAATGTTAACAAAAGT+AGG 0.552922 8:-20350559 None:intergenic
TCCATACTCGATCATAGCAA+TGG 0.562685 8:-20350941 None:intergenic
TTGAAAATGCTCATAAACTG+AGG 0.569073 8:-20350145 None:intergenic
CAGTAAAGGCTAAGTCCTGA+AGG 0.574230 8:-20348975 None:intergenic
GGTTCCACCACTTCTGGCAG+GGG 0.576004 8:-20351042 None:intergenic
CATTGGACCCCTGCCAGAAG+TGG 0.576361 8:+20351035 MsG0880043191.01.T01:CDS
TAAATTTGCTAAACACTTGG+TGG 0.581311 8:+20350906 MsG0880043191.01.T01:CDS
TTCCAGTTCTCTTCAAATGG+AGG 0.585907 8:-20350322 None:intergenic
ATGGAAATGGCAATACCAGT+TGG 0.586799 8:+20350407 MsG0880043191.01.T01:CDS
GTGTGGCAGACTCATGGACG+AGG 0.590376 8:+20351004 MsG0880043191.01.T01:CDS
ACCGATATGATTGAAAAGGT+TGG 0.591232 8:+20351138 MsG0880043191.01.T01:CDS
CAAAGCAGGAGTTTCTTCAT+CGG 0.594821 8:-20349454 None:intergenic
AATAACCAATCACTAATGGA+AGG 0.606695 8:-20348938 None:intergenic
ATTGATATGAAGAAACAAAG+AGG 0.610144 8:-20350967 None:intergenic
ATATAAACGAAGAAGTGCAA+AGG 0.634675 8:+20351103 MsG0880043191.01.T01:CDS
ATCATTCACGGTATAACGGG+TGG 0.640727 8:+20350737 MsG0880043191.01.T01:CDS
GTAGATTCAAAAGAGCCACT+AGG 0.649765 8:-20350484 None:intergenic
TATAACGGGTGGCAAGACAC+TGG 0.654414 8:+20350748 MsG0880043191.01.T01:CDS
GAAAGTCTTCTTCCAATCGG+AGG 0.659223 8:+20351204 MsG0880043191.01.T01:CDS
ATGTCAAAAGAAATATCATG+AGG 0.679852 8:-20350046 None:intergenic
ACTGTGGAATCCATATACAC+AGG 0.683960 8:+20350447 MsG0880043191.01.T01:CDS
TATTGGAGTTGCGAAGAATG+GGG 0.686970 8:+20351065 MsG0880043191.01.T01:CDS
GAATTCAAAGTCATTCCTAG+TGG 0.708033 8:+20350469 MsG0880043191.01.T01:CDS
GAGTTCTCTAGTCTTAAACA+AGG 0.718512 8:+20348914 MsG0880043191.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAATTATTATCATCA+TGG - Chr8:20350252-20350271 None:intergenic 10.0%
!! AATTAGGAATTAAGTTAATT+TGG + Chr8:20349650-20349669 MsG0880043191.01.T01:intron 15.0%
!! AGTTAGTGATTATAATTATA+AGG + Chr8:20349295-20349314 MsG0880043191.01.T01:intron 15.0%
!!! AATTATATATTTTTGCTTTC+TGG + Chr8:20350262-20350281 MsG0880043191.01.T01:CDS 15.0%
!!! TAGCAAATTTATCATAATTT+TGG - Chr8:20350897-20350916 None:intergenic 15.0%
!! AACAATGTATAATATATGCA+AGG + Chr8:20349573-20349592 MsG0880043191.01.T01:intron 20.0%
!! ATAGCCTAAAAAGTAATTAT+TGG + Chr8:20350689-20350708 MsG0880043191.01.T01:CDS 20.0%
!! TAACTTAATTCCTAATTGAA+TGG - Chr8:20349647-20349666 None:intergenic 20.0%
!!! TACATGTGTATGTAAATTTT+GGG + Chr8:20350105-20350124 MsG0880043191.01.T01:CDS 20.0%
!!! TGTTTCTTCATATCAATTTT+GGG + Chr8:20350973-20350992 MsG0880043191.01.T01:CDS 20.0%
!!! TTACATGTGTATGTAAATTT+TGG + Chr8:20350104-20350123 MsG0880043191.01.T01:CDS 20.0%
!!! TTGTTTCTTCATATCAATTT+TGG + Chr8:20350972-20350991 MsG0880043191.01.T01:CDS 20.0%
! AACAAAGAGAAGAAGAAAAA+AGG + Chr8:20349427-20349446 MsG0880043191.01.T01:CDS 25.0%
! ACAGCGTATAAAAAACTAAA+AGG - Chr8:20349767-20349786 None:intergenic 25.0%
! ATGTCAAAAGAAATATCATG+AGG - Chr8:20350049-20350068 None:intergenic 25.0%
! ATTATTATCATCATGGTCTT+CGG - Chr8:20350245-20350264 None:intergenic 25.0%
! ATTCAAAATTGACATCAGAA+GGG + Chr8:20349256-20349275 MsG0880043191.01.T01:intron 25.0%
! ATTGATATGAAGAAACAAAG+AGG - Chr8:20350970-20350989 None:intergenic 25.0%
! CAACAATAAAAATATCTTCG+CGG - Chr8:20350348-20350367 None:intergenic 25.0%
! CCAGCTAAAATTGTTTAATA+TGG - Chr8:20349790-20349809 None:intergenic 25.0%
! CCTAAAAAGTAATTATTGGA+GGG + Chr8:20350693-20350712 MsG0880043191.01.T01:CDS 25.0%
! TATGCTACAATAGAAGAAAA+GGG - Chr8:20349951-20349970 None:intergenic 25.0%
! TGTATAATATATGCAAGGTT+CGG + Chr8:20349578-20349597 MsG0880043191.01.T01:intron 25.0%
! TGTTTGTATGCAATTATCAA+TGG + Chr8:20349991-20350010 MsG0880043191.01.T01:CDS 25.0%
! TTATGCTACAATAGAAGAAA+AGG - Chr8:20349952-20349971 None:intergenic 25.0%
! TTGCAGATTTAAGCAATTAA+TGG + Chr8:20349383-20349402 MsG0880043191.01.T01:intron 25.0%
!! TTTGTTAACATTCATGGTTT+TGG + Chr8:20350565-20350584 MsG0880043191.01.T01:CDS 25.0%
!!! ATATCAATTTTGGGTGAATT+TGG + Chr8:20350982-20351001 MsG0880043191.01.T01:CDS 25.0%
!!! CCATATTAAACAATTTTAGC+TGG + Chr8:20349787-20349806 MsG0880043191.01.T01:intron 25.0%
!!! CTTATGATTTTTTTTTTGGC+CGG - Chr8:20349613-20349632 None:intergenic 25.0%
!!! TATGGTGTTTGTGATTTTTT+TGG - Chr8:20349871-20349890 None:intergenic 25.0%
!!! TGATAAATTTGCTAAACACT+TGG + Chr8:20350903-20350922 MsG0880043191.01.T01:CDS 25.0%
!!! TGGGCTTATGATTTTTTTTT+TGG - Chr8:20349617-20349636 None:intergenic 25.0%
!!! TTATACTTTTTAAGTTGTGC+AGG + Chr8:20349061-20349080 MsG0880043191.01.T01:intron 25.0%
!!! TTATCATAATTTTGGCTCAA+GGG - Chr8:20350889-20350908 None:intergenic 25.0%
!!! TTATGATTTTTTTTTTGGCC+GGG - Chr8:20349612-20349631 None:intergenic 25.0%
!!! TTTATCATAATTTTGGCTCA+AGG - Chr8:20350890-20350909 None:intergenic 25.0%
!!! TTTTTTCTATTGATCAAAGC+AGG - Chr8:20349471-20349490 None:intergenic 25.0%
AAATCTCTTGAGAGATTTCT+TGG - Chr8:20350086-20350105 None:intergenic 30.0%
AAGAGAAGAAGAAAAAAGGA+AGG + Chr8:20349431-20349450 MsG0880043191.01.T01:CDS 30.0%
AATAACCAATCACTAATGGA+AGG - Chr8:20348941-20348960 None:intergenic 30.0%
AATCTCTTGAGAGATTTCTT+GGG - Chr8:20350085-20350104 None:intergenic 30.0%
AATGAAAGTCTTCTTCCAAT+CGG + Chr8:20351201-20351220 MsG0880043191.01.T01:CDS 30.0%
AATGGCACTCACTAAAAAAA+AGG + Chr8:20350009-20350028 MsG0880043191.01.T01:CDS 30.0%
ACTTTGAATTCCTGTGTATA+TGG - Chr8:20350460-20350479 None:intergenic 30.0%
AGCACAATTGTTGAGAAAAA+TGG - Chr8:20349907-20349926 None:intergenic 30.0%
ATAGCATTGTGAAATAAGTG+TGG - Chr8:20349323-20349342 None:intergenic 30.0%
CCATGAATGTTAACAAAAGT+AGG - Chr8:20350562-20350581 None:intergenic 30.0%
CTAATTGAATGGAGATGATT+GGG - Chr8:20349636-20349655 None:intergenic 30.0%
CTTCTATTGTAGCATAACAT+TGG + Chr8:20349955-20349974 MsG0880043191.01.T01:intron 30.0%
GATTCAAAATTGACATCAGA+AGG + Chr8:20349255-20349274 MsG0880043191.01.T01:intron 30.0%
GCAAAATAACCAATCACTAA+TGG - Chr8:20348945-20348964 None:intergenic 30.0%
GCCTAAAAAGTAATTATTGG+AGG + Chr8:20350692-20350711 MsG0880043191.01.T01:CDS 30.0%
GTATAATATATGCAAGGTTC+GGG + Chr8:20349579-20349598 MsG0880043191.01.T01:intron 30.0%
GTTATTCAGTGAACTTTCAT+GGG + Chr8:20350770-20350789 MsG0880043191.01.T01:CDS 30.0%
TAACAAAAGTAGGTGTAAGA+GGG - Chr8:20350552-20350571 None:intergenic 30.0%
TATAATATATGCAAGGTTCG+GGG + Chr8:20349580-20349599 MsG0880043191.01.T01:intron 30.0%
TGAGCACTTTATAGCAAATA+TGG + Chr8:20349100-20349119 MsG0880043191.01.T01:intron 30.0%
TTAACAAAAGTAGGTGTAAG+AGG - Chr8:20350553-20350572 None:intergenic 30.0%
TTGAAAATGCTCATAAACTG+AGG - Chr8:20350148-20350167 None:intergenic 30.0%
TTGAAATGCCAAATCATTCA+CGG + Chr8:20350725-20350744 MsG0880043191.01.T01:CDS 30.0%
TTGGTATTGCAGAATGAATT+AGG + Chr8:20349669-20349688 MsG0880043191.01.T01:intron 30.0%
TTGTGCAAAAAATAGTACTG+TGG + Chr8:20350431-20350450 MsG0880043191.01.T01:CDS 30.0%
! ACCAACCTTTTCAATCATAT+CGG - Chr8:20351142-20351161 None:intergenic 30.0%
! ATATAAACGAAGAAGTGCAA+AGG + Chr8:20351103-20351122 MsG0880043191.01.T01:CDS 30.0%
!! ATTGAAAAGGTTGGTGTTAA+AGG + Chr8:20351147-20351166 MsG0880043191.01.T01:CDS 30.0%
!! CCTACTTTTGTTAACATTCA+TGG + Chr8:20350559-20350578 MsG0880043191.01.T01:CDS 30.0%
!! CGCGAAGATATTTTTATTGT+TGG + Chr8:20350346-20350365 MsG0880043191.01.T01:CDS 30.0%
!! TAAATTTGCTAAACACTTGG+TGG + Chr8:20350906-20350925 MsG0880043191.01.T01:CDS 30.0%
!! TCTAGCTTCTTCAATTTTTG+TGG - Chr8:20349232-20349251 None:intergenic 30.0%
!!! CCCTCCAATAATTACTTTTT+AGG - Chr8:20350696-20350715 None:intergenic 30.0%
!!! TATCATAATTTTGGCTCAAG+GGG - Chr8:20350888-20350907 None:intergenic 30.0%
!!! TATTTTTTGCACAATCCAAC+TGG - Chr8:20350425-20350444 None:intergenic 30.0%
AAAAAGCAGGAGTCTTCTTT+AGG - Chr8:20350222-20350241 None:intergenic 35.0%
AAATGATCAGACTTTATGGC+AGG + Chr8:20350663-20350682 MsG0880043191.01.T01:CDS 35.0%
AAGACGAACACAATTACAAC+AGG - Chr8:20349359-20349378 None:intergenic 35.0%
AAGGCATGAATGTTGTCAAA+TGG + Chr8:20351170-20351189 MsG0880043191.01.T01:CDS 35.0%
ACACATATAAGACCATTGGA+AGG - Chr8:20349017-20349036 None:intergenic 35.0%
ACCGATATGATTGAAAAGGT+TGG + Chr8:20351138-20351157 MsG0880043191.01.T01:CDS 35.0%
ACTAGAGAACTCTTCACATT+GGG - Chr8:20348906-20348925 None:intergenic 35.0%
ACTCACGAAGATAGATGATT+TGG - Chr8:20349537-20349556 None:intergenic 35.0%
AGAATAGCGTCAAGTTAGAT+TGG + Chr8:20350296-20350315 MsG0880043191.01.T01:CDS 35.0%
ATTTGTCTCTATCAAGGCAA+TGG + Chr8:20350388-20350407 MsG0880043191.01.T01:CDS 35.0%
CAAATATGGCGTCAAAAGTT+AGG + Chr8:20349114-20349133 MsG0880043191.01.T01:intron 35.0%
CAAATCATTCACGGTATAAC+GGG + Chr8:20350734-20350753 MsG0880043191.01.T01:CDS 35.0%
CCAAATCATTCACGGTATAA+CGG + Chr8:20350733-20350752 MsG0880043191.01.T01:CDS 35.0%
CCAATCATCTCCATTCAATT+AGG + Chr8:20349634-20349653 MsG0880043191.01.T01:intron 35.0%
CCTAATTGAATGGAGATGAT+TGG - Chr8:20349637-20349656 None:intergenic 35.0%
GAATTCAAAGTCATTCCTAG+TGG + Chr8:20350469-20350488 MsG0880043191.01.T01:CDS 35.0%
GCTTACACATATAAGACCAT+TGG - Chr8:20349021-20349040 None:intergenic 35.0%
GGTTATTCAGTGAACTTTCA+TGG + Chr8:20350769-20350788 MsG0880043191.01.T01:CDS 35.0%
GTCCAAATGATCAGACTTTA+TGG + Chr8:20350659-20350678 MsG0880043191.01.T01:CDS 35.0%
TAACTATGTATTCCTCCGAT+TGG - Chr8:20351219-20351238 None:intergenic 35.0%
TAAGCAATTAATGGAGCAAG+AGG + Chr8:20349392-20349411 MsG0880043191.01.T01:exon 35.0%
TCATCAAGAACTTGTCTCAA+AGG - Chr8:20349153-20349172 None:intergenic 35.0%
TGCCATAAAGTCTGATCATT+TGG - Chr8:20350664-20350683 None:intergenic 35.0%
! ATAATCACTAACTTGTCACC+AGG - Chr8:20349288-20349307 None:intergenic 35.0%
! GGCATAATTTGTCTCTATCA+AGG + Chr8:20350382-20350401 MsG0880043191.01.T01:CDS 35.0%
! GGGGTTACGAAGATTATTTT+GGG + Chr8:20350806-20350825 MsG0880043191.01.T01:CDS 35.0%
! TAATCACTAACTTGTCACCA+GGG - Chr8:20349287-20349306 None:intergenic 35.0%
! TGGGGTTACGAAGATTATTT+TGG + Chr8:20350805-20350824 MsG0880043191.01.T01:CDS 35.0%
!! AAAAGGTTGGTGTTAAAGGA+AGG + Chr8:20351151-20351170 MsG0880043191.01.T01:CDS 35.0%
!! AATTTTGGGTGAATTTGGTG+TGG + Chr8:20350987-20351006 MsG0880043191.01.T01:CDS 35.0%
!! ATTGTTGGTTCTGTTGTTCA+TGG + Chr8:20350361-20350380 MsG0880043191.01.T01:CDS 35.0%
!! GAGTACCGATATGATTGAAA+AGG + Chr8:20351134-20351153 MsG0880043191.01.T01:CDS 35.0%
!! GAGTTCTCTAGTCTTAAACA+AGG + Chr8:20348914-20348933 MsG0880043191.01.T01:five_prime_UTR 35.0%
!! GGGTTACGAAGATTATTTTG+GGG + Chr8:20350807-20350826 MsG0880043191.01.T01:CDS 35.0%
!! TGTAACGATGTTTTCAAGCA+TGG + Chr8:20350637-20350656 MsG0880043191.01.T01:CDS 35.0%
!!! AATGGACAGCGTCATTTTTA+TGG - Chr8:20349889-20349908 None:intergenic 35.0%
!!! GGTGTTTGTGATTTTTTTGG+TGG - Chr8:20349868-20349887 None:intergenic 35.0%
!!! TTATTTTGGGGATCAAGTGT+TGG + Chr8:20350819-20350838 MsG0880043191.01.T01:CDS 35.0%
AAGGTCCTTCCATTAGTGAT+TGG + Chr8:20348933-20348952 MsG0880043191.01.T01:five_prime_UTR 40.0%
ACTGTGGAATCCATATACAC+AGG + Chr8:20350447-20350466 MsG0880043191.01.T01:CDS 40.0%
ACTTTCATGGGATGTGTCAT+TGG + Chr8:20350782-20350801 MsG0880043191.01.T01:CDS 40.0%
AGATCTTCAAAAACTGAGCC+AGG - Chr8:20350529-20350548 None:intergenic 40.0%
ATATGGCGTCAAAAGTTAGG+AGG + Chr8:20349117-20349136 MsG0880043191.01.T01:intron 40.0%
ATGGAAATGGCAATACCAGT+TGG + Chr8:20350407-20350426 MsG0880043191.01.T01:CDS 40.0%
CAAAGCAGGAGTTTCTTCAT+CGG - Chr8:20349457-20349476 None:intergenic 40.0%
CCGTTATACCGTGAATGATT+TGG - Chr8:20350736-20350755 None:intergenic 40.0%
CTATTGGAGTTGCGAAGAAT+GGG + Chr8:20351064-20351083 MsG0880043191.01.T01:CDS 40.0%
CTCTATCAAGGCAATGGAAA+TGG + Chr8:20350394-20350413 MsG0880043191.01.T01:CDS 40.0%
GAAATTTGTAGACCCAATGC+AGG + Chr8:20349179-20349198 MsG0880043191.01.T01:intron 40.0%
GACTAGAGAACTCTTCACAT+TGG - Chr8:20348907-20348926 None:intergenic 40.0%
GAGAGATTTCTTGGGCAATT+TGG - Chr8:20350077-20350096 None:intergenic 40.0%
GTAGATTCAAAAGAGCCACT+AGG - Chr8:20350487-20350506 None:intergenic 40.0%
TATTGGAGTTGCGAAGAATG+GGG + Chr8:20351065-20351084 MsG0880043191.01.T01:CDS 40.0%
TCCATACTCGATCATAGCAA+TGG - Chr8:20350944-20350963 None:intergenic 40.0%
TCCATTGCTATGATCGAGTA+TGG + Chr8:20350940-20350959 MsG0880043191.01.T01:CDS 40.0%
TTACGTGTGCTTACCAGTAA+AGG - Chr8:20348992-20349011 None:intergenic 40.0%
TTCCAGTTCTCTTCAAATGG+AGG - Chr8:20350325-20350344 None:intergenic 40.0%
TTTGCTCTATCAGTTCCTTC+AGG + Chr8:20348960-20348979 MsG0880043191.01.T01:five_prime_UTR 40.0%
! CTGACTTTTGAACCTGCATT+GGG - Chr8:20349194-20349213 None:intergenic 40.0%
!! ACTGACTTTTGAACCTGCAT+TGG - Chr8:20349195-20349214 None:intergenic 40.0%
!!! ATAATTTTGGCTCAAGGGGA+AGG - Chr8:20350884-20350903 None:intergenic 40.0%
!!! TAATTTTGGCTCAAGGGGAA+GGG - Chr8:20350883-20350902 None:intergenic 40.0%
AAAAACTGAGCCAGGAGGAA+AGG - Chr8:20350521-20350540 None:intergenic 45.0%
AAGCAGGAGTCTTCTTTAGG+AGG - Chr8:20350219-20350238 None:intergenic 45.0%
ATTCTCAAAGCCTTTCCTCC+TGG + Chr8:20350508-20350527 MsG0880043191.01.T01:CDS 45.0%
CACCTCCATTTGAAGAGAAC+TGG + Chr8:20350320-20350339 MsG0880043191.01.T01:CDS 45.0%
CAGTAAAGGCTAAGTCCTGA+AGG - Chr8:20348978-20348997 None:intergenic 45.0%
CAGTTCTCTTCAAATGGAGG+TGG - Chr8:20350322-20350341 None:intergenic 45.0%
CCATTCTTCGCAACTCCAAT+AGG - Chr8:20351066-20351085 None:intergenic 45.0%
CCTATTGGAGTTGCGAAGAA+TGG + Chr8:20351063-20351082 MsG0880043191.01.T01:CDS 45.0%
CGGTTCCAGTTCTCTTCAAA+TGG - Chr8:20350328-20350347 None:intergenic 45.0%
GAAAGTCTTCTTCCAATCGG+AGG + Chr8:20351204-20351223 MsG0880043191.01.T01:CDS 45.0%
GCACACGTAAAACCTTCCAA+TGG + Chr8:20349002-20349021 MsG0880043191.01.T01:intron 45.0%
TCATGGTCTTCGGAAAAAGC+AGG - Chr8:20350235-20350254 None:intergenic 45.0%
TCTTCAAAAACTGAGCCAGG+AGG - Chr8:20350526-20350545 None:intergenic 45.0%
! ATCATTCACGGTATAACGGG+TGG + Chr8:20350737-20350756 MsG0880043191.01.T01:CDS 45.0%
! CTTCAGGACTTAGCCTTTAC+TGG + Chr8:20348976-20348995 MsG0880043191.01.T01:five_prime_UTR 45.0%
! TCATGGGATGTGTCATTGGT+GGG + Chr8:20350786-20350805 MsG0880043191.01.T01:CDS 45.0%
! TTCATGGGATGTGTCATTGG+TGG + Chr8:20350785-20350804 MsG0880043191.01.T01:CDS 45.0%
!! AATTTGGTGTGGCAGACTCA+TGG + Chr8:20350998-20351017 MsG0880043191.01.T01:CDS 45.0%
!! TGGACGAGGCTTTTTAGCAT+TGG + Chr8:20351018-20351037 MsG0880043191.01.T01:CDS 45.0%
CCAATAGGTTCCACCACTTC+TGG - Chr8:20351051-20351070 None:intergenic 50.0%
! ACTAACTTGTCACCAGGGTG+TGG - Chr8:20349282-20349301 None:intergenic 50.0%
! CATGGGATGTGTCATTGGTG+GGG + Chr8:20350787-20350806 MsG0880043191.01.T01:CDS 50.0%
! CCAGAAGTGGTGGAACCTAT+TGG + Chr8:20351048-20351067 MsG0880043191.01.T01:CDS 50.0%
!! TATAACGGGTGGCAAGACAC+TGG + Chr8:20350748-20350767 MsG0880043191.01.T01:CDS 50.0%
AGGTTCCACCACTTCTGGCA+GGG - Chr8:20351046-20351065 None:intergenic 55.0%
CAAGGTTCGGGGTTCAAACC+CGG + Chr8:20349591-20349610 MsG0880043191.01.T01:intron 55.0%
TAGGTTCCACCACTTCTGGC+AGG - Chr8:20351047-20351066 None:intergenic 55.0%
ACATCAGAAGGGCCACACCC+TGG + Chr8:20349267-20349286 MsG0880043191.01.T01:intron 60.0%
CATTGGACCCCTGCCAGAAG+TGG + Chr8:20351035-20351054 MsG0880043191.01.T01:CDS 60.0%
GGTTCCACCACTTCTGGCAG+GGG - Chr8:20351045-20351064 None:intergenic 60.0%
GTGTGGCAGACTCATGGACG+AGG + Chr8:20351004-20351023 MsG0880043191.01.T01:CDS 60.0%
TGGACCCCTGCCAGAAGTGG+TGG + Chr8:20351038-20351057 MsG0880043191.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 20348894 20351239 20348894 ID=MsG0880043191.01;Name=MsG0880043191.01
Chr8 mRNA 20348894 20351239 20348894 ID=MsG0880043191.01.T01;Parent=MsG0880043191.01;Name=MsG0880043191.01.T01;_AED=0.19;_eAED=0.19;_QI=117|0|0|0.33|1|1|3|0|473
Chr8 exon 20348894 20348997 20348894 ID=MsG0880043191.01.T01:exon:4138;Parent=MsG0880043191.01.T01
Chr8 exon 20349389 20349550 20349389 ID=MsG0880043191.01.T01:exon:4139;Parent=MsG0880043191.01.T01
Chr8 exon 20349967 20351239 20349967 ID=MsG0880043191.01.T01:exon:4140;Parent=MsG0880043191.01.T01
Chr8 five_prime_UTR 20348894 20348997 20348894 ID=MsG0880043191.01.T01:five_prime_utr;Parent=MsG0880043191.01.T01
Chr8 five_prime_UTR 20349389 20349401 20349389 ID=MsG0880043191.01.T01:five_prime_utr;Parent=MsG0880043191.01.T01
Chr8 CDS 20349402 20349550 20349402 ID=MsG0880043191.01.T01:cds;Parent=MsG0880043191.01.T01
Chr8 CDS 20349967 20351239 20349967 ID=MsG0880043191.01.T01:cds;Parent=MsG0880043191.01.T01
Gene Sequence

>MsG0880043191.01.T01

ATGGAGCAAGAGGCAAAGAAGAAACAACAAAGAGAAGAAGAAAAAAGGAAGGCCGATGAAGAAACTCCTGCTTTGATCAATAGAAAAAAAATGACAAAATTAAGAACATACAAGAGTGAGACTAATCATAAGCCAAATCATCTATCTTCCATAACATTGGTTTTCACTGCATCTGTTTGTATGCAATTATCAATGGCACTCACTAAAAAAAAGGTTAGCAATTATATACCTCATGATATTTCTTTTGACATTCTATCCAAATTGCCCAAGAAATCTCTCAAGAGATTTACATGTGTATGTAAATTTTGGGCTAATTTATTTGAAAAACCTCAGTTTATGAGCATTTTCAAGAACAATTTATTACTAGCTAAATATGATGATTATCATAATTCACGTCTCCTCCTAAAGAAGACTCCTGCTTTTTCCGAAGACCATGATGATAATAATTATATATTTTTGCTTTCTGGTGAGACGTTTGAGAATAGCGTCAAGTTAGATTGGCCACCTCCATTTGAAGAGAACTGGAACCGCGAAGATATTTTTATTGTTGGTTCTGTTGTTCATGGCATAATTTGTCTCTATCAAGGCAATGGAAATGGCAATACCAGTTGGATTGTGCAAAAAATAGTACTGTGGAATCCATATACACAGGAATTCAAAGTCATTCCTAGTGGCTCTTTTGAATCTACAATTCTCAAAGCCTTTCCTCCTGGCTCAGTTTTTGAAGATCTCCCTCTTACACCTACTTTTGTTAACATTCATGGTTTTGGATATGACTCTGTGACAGATGACTACAAGTTGATTCGATATTTTTGTATATGTAACGATGTTTTCAAGCATGGTCCAAATGATCAGACTTTATGGCAGGTTTATAGCCTAAAAAGTAATTATTGGAGGGATCTTCAAGTTGAAATGCCAAATCATTCACGGTATAACGGGTGGCAAGACACTGGTTATTCAGTGAACTTTCATGGGATGTGTCATTGGTGGGGTTACGAAGATTATTTTGGGGATCAAGTGTTGGTATCATTTAACTTGAGTGACGAGAACTTCGTCAAAACACCCTTCCCCTTGAGCCAAAATTATGATAAATTTGCTAAACACTTGGTGGTGTTGAAAGAATCCATTGCTATGATCGAGTATGGAGATCCTCTTTGTTTCTTCATATCAATTTTGGGTGAATTTGGTGTGGCAGACTCATGGACGAGGCTTTTTAGCATTGGACCCCTGCCAGAAGTGGTGGAACCTATTGGAGTTGCGAAGAATGGGGATATATTTTACTTAAATATAAACGAAGAAGTGCAAAGGTTTAATTTGAGTACCGATATGATTGAAAAGGTTGGTGTTAAAGGAAGGCATGAATGTTGTCAAATGGTTATTTATAATGAAAGTCTTCTTCCAATCGGAGGAATACATAGTTAA

Protein sequence

>MsG0880043191.01.T01

MEQEAKKKQQREEEKRKADEETPALINRKKMTKLRTYKSETNHKPNHLSSITLVFTASVCMQLSMALTKKKVSNYIPHDISFDILSKLPKKSLKRFTCVCKFWANLFEKPQFMSIFKNNLLLAKYDDYHNSRLLLKKTPAFSEDHDDNNYIFLLSGETFENSVKLDWPPPFEENWNREDIFIVGSVVHGIICLYQGNGNGNTSWIVQKIVLWNPYTQEFKVIPSGSFESTILKAFPPGSVFEDLPLTPTFVNIHGFGYDSVTDDYKLIRYFCICNDVFKHGPNDQTLWQVYSLKSNYWRDLQVEMPNHSRYNGWQDTGYSVNFHGMCHWWGYEDYFGDQVLVSFNLSDENFVKTPFPLSQNYDKFAKHLVVLKESIAMIEYGDPLCFFISILGEFGVADSWTRLFSIGPLPEVVEPIGVAKNGDIFYLNINEEVQRFNLSTDMIEKVGVKGRHECCQMVIYNESLLPIGGIHS*