AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025208.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025208.01.T01 MTR_5g024260 86.224 392 40 5 1 379 7 397 0.0 674
MsG0580025208.01.T01 MTR_3g011120 59.432 387 132 10 1 380 1 369 7.55e-143 411
MsG0580025208.01.T01 MTR_8g467670 53.924 395 159 7 5 392 2 380 2.12e-134 390
MsG0580025208.01.T01 MTR_2g066200 48.284 408 176 12 1 392 1 389 2.30e-114 339
MsG0580025208.01.T01 MTR_2g066170 48.889 405 176 14 1 392 1 387 1.14e-112 335
MsG0580025208.01.T01 MTR_8g063440 47.015 402 185 7 1 392 1 384 3.09e-108 323
MsG0580025208.01.T01 MTR_2g034700 49.492 394 167 10 3 388 4 373 9.30e-108 322
MsG0580025208.01.T01 MTR_1g098180 49.254 402 143 14 1 384 1 359 2.27e-104 313
MsG0580025208.01.T01 MTR_2g066150 45.202 396 178 7 1 392 1 361 4.65e-104 311
MsG0580025208.01.T01 MTR_8g464770 46.966 379 179 8 14 384 9 373 1.43e-100 303
MsG0580025208.01.T01 MTR_8g039500 50.538 372 146 16 1 360 1 346 1.60e-99 300
MsG0580025208.01.T01 MTR_8g064890 47.174 407 182 12 1 392 1 389 3.40e-99 300
MsG0580025208.01.T01 MTR_0129s0120 45.610 410 187 15 1 390 2 395 4.07e-97 295
MsG0580025208.01.T01 MTR_6g086825 44.794 413 190 12 7 392 60 461 1.11e-96 296
MsG0580025208.01.T01 MTR_2g021800 43.541 418 184 14 14 392 13 417 3.06e-96 293
MsG0580025208.01.T01 MTR_4g028680 46.845 412 175 17 8 392 7 401 2.47e-95 291
MsG0580025208.01.T01 MTR_2g065860 43.909 394 199 9 11 392 6 389 2.97e-95 290
MsG0580025208.01.T01 MTR_4g028510 46.341 410 182 16 7 391 6 402 5.47e-95 292
MsG0580025208.01.T01 MTR_4g102410 43.735 423 189 12 3 389 39 448 1.82e-94 290
MsG0580025208.01.T01 MTR_2g022000 43.099 413 184 15 14 388 13 412 2.72e-93 286
MsG0580025208.01.T01 MTR_0129s0050 42.788 416 188 11 11 391 8 408 6.42e-93 285
MsG0580025208.01.T01 MTR_0129s0070 45.146 412 190 15 1 392 2 397 6.44e-93 285
MsG0580025208.01.T01 MTR_2g021770 41.469 422 203 14 1 392 1 408 1.46e-92 284
MsG0580025208.01.T01 MTR_0054s0100 42.716 405 195 12 15 392 15 409 7.77e-91 280
MsG0580025208.01.T01 MTR_2g021950 42.965 398 196 13 9 387 8 393 8.80e-91 279
MsG0580025208.01.T01 MTR_0054s0090 42.344 418 196 14 8 392 2 407 1.43e-90 279
MsG0580025208.01.T01 MTR_6g090180 42.512 414 197 13 6 388 32 435 2.86e-90 279
MsG0580025208.01.T01 MTR_0831s0010 44.081 397 193 10 4 387 37 417 4.85e-90 278
MsG0580025208.01.T01 MTR_2g065840 44.226 407 191 16 1 390 1 388 4.94e-90 277
MsG0580025208.01.T01 MTR_6g079770 41.787 414 195 12 15 392 15 418 2.61e-89 276
MsG0580025208.01.T01 MTR_8g012090 47.075 359 141 13 14 360 13 334 5.23e-89 272
MsG0580025208.01.T01 MTR_8g064790 44.697 396 157 11 1 392 1 338 1.29e-88 271
MsG0580025208.01.T01 MTR_4g028750 46.257 374 167 14 8 360 7 367 1.30e-88 273
MsG0580025208.01.T01 MTR_7g017130 40.712 393 204 9 17 392 18 398 1.82e-88 273
MsG0580025208.01.T01 MTR_7g017040 42.211 398 196 10 15 391 14 398 2.36e-88 273
MsG0580025208.01.T01 MTR_5g043605 45.274 402 135 15 1 386 2 334 8.85e-88 270
MsG0580025208.01.T01 MTR_6g079810 42.891 422 188 17 6 389 55 461 1.93e-87 273
MsG0580025208.01.T01 MTR_0134s0060 40.767 417 195 13 15 392 10 413 3.36e-87 270
MsG0580025208.01.T01 MTR_5g097330 41.363 411 196 14 10 391 9 403 3.61e-87 270
MsG0580025208.01.T01 MTR_5g037680 40.909 396 190 11 13 384 4 379 5.64e-87 271
MsG0580025208.01.T01 MTR_4g014370 41.546 414 196 10 14 392 8 410 2.69e-86 268
MsG0580025208.01.T01 MTR_4g028660 42.469 405 194 16 8 388 7 396 3.90e-86 267
MsG0580025208.01.T01 MTR_4g027450 42.469 405 194 16 8 388 7 396 3.90e-86 267
MsG0580025208.01.T01 MTR_7g017170 40.000 405 202 11 17 392 18 410 8.16e-86 266
MsG0580025208.01.T01 MTR_4g117550 40.633 411 188 12 1 392 1 374 2.04e-85 265
MsG0580025208.01.T01 MTR_5g096630 41.523 407 196 12 17 391 18 414 2.33e-85 266
MsG0580025208.01.T01 MTR_4g130330 42.683 410 183 17 13 391 3 391 2.42e-85 265
MsG0580025208.01.T01 MTR_6g080680 42.643 401 196 12 2 384 4 388 2.75e-85 265
MsG0580025208.01.T01 MTR_2g038680 41.205 415 189 14 14 390 13 410 8.10e-85 264
MsG0580025208.01.T01 MTR_7g069550 40.967 393 197 11 14 383 11 391 8.46e-85 263
MsG0580025208.01.T01 MTR_1g050308 41.000 400 154 11 1 392 23 348 1.87e-84 261
MsG0580025208.01.T01 MTR_5g059430 40.143 421 198 14 9 389 18 424 7.32e-84 262
MsG0580025208.01.T01 MTR_5g097220 41.080 426 192 15 6 391 2 408 1.77e-83 261
MsG0580025208.01.T01 MTR_5g069390 40.295 407 212 11 9 391 18 417 4.35e-82 260
MsG0580025208.01.T01 MTR_7g079640 42.703 370 187 9 7 369 3 354 5.79e-82 256
MsG0580025208.01.T01 MTR_8g036970 45.556 360 126 12 21 369 2 302 1.10e-81 255
MsG0580025208.01.T01 MTR_1g007410 41.500 400 194 11 14 388 19 403 6.17e-81 254
MsG0580025208.01.T01 MTR_1g007450 40.955 398 198 11 1 377 1 382 8.51e-81 254
MsG0580025208.01.T01 MTR_8g046310 41.645 389 197 11 7 386 6 373 1.32e-80 252
MsG0580025208.01.T01 MTR_5g097350 41.534 378 188 13 26 388 25 384 1.76e-80 252
MsG0580025208.01.T01 MTR_4g055820 43.514 370 167 12 6 346 3 359 2.30e-80 251
MsG0580025208.01.T01 MTR_8g033110 41.509 424 191 15 10 391 7 415 3.73e-79 249
MsG0580025208.01.T01 MTR_8g063330 41.667 360 183 9 1 345 1 348 3.76e-79 251
MsG0580025208.01.T01 MTR_5g096910 39.899 396 208 13 11 390 11 392 6.23e-79 248
MsG0580025208.01.T01 MTR_8g033140 42.424 429 184 18 8 392 10 419 1.10e-78 248
MsG0580025208.01.T01 MTR_5g097680 40.566 424 204 14 10 391 10 427 1.28e-78 249
MsG0580025208.01.T01 MTR_6g478230 39.765 425 199 14 3 392 6 408 1.79e-77 245
MsG0580025208.01.T01 MTR_1g053510 40.920 413 189 13 10 386 8 401 1.16e-76 243
MsG0580025208.01.T01 MTR_2g064950 38.832 394 194 11 15 382 8 380 1.31e-75 240
MsG0580025208.01.T01 MTR_8g033090 40.094 424 194 14 10 391 7 412 2.68e-74 237
MsG0580025208.01.T01 MTR_8g018110 39.904 416 191 13 10 391 7 397 1.20e-72 232
MsG0580025208.01.T01 MTR_8g046200 40.275 437 179 16 7 386 6 417 1.42e-72 233
MsG0580025208.01.T01 MTR_8g032980 38.952 439 200 16 4 392 2 422 5.72e-72 231
MsG0580025208.01.T01 MTR_8g063370 40.409 391 197 11 3 382 18 383 1.58e-71 229
MsG0580025208.01.T01 MTR_8g063310 37.692 390 202 14 14 382 19 388 1.61e-71 229
MsG0580025208.01.T01 MTR_8g013000 38.520 392 202 13 15 379 8 387 6.04e-71 228
MsG0580025208.01.T01 MTR_2g104280 40.049 412 194 16 15 391 12 405 2.68e-70 226
MsG0580025208.01.T01 MTR_2g104340 38.821 407 199 16 15 392 12 397 2.75e-70 226
MsG0580025208.01.T01 MTR_8g041270 37.793 426 212 17 1 392 1 407 3.34e-70 226
MsG0580025208.01.T01 MTR_8g046220 38.118 425 202 11 1 387 1 402 3.43e-70 226
MsG0580025208.01.T01 MTR_6g461660 39.552 402 208 13 11 391 13 400 3.09e-69 224
MsG0580025208.01.T01 MTR_5g072060 39.894 376 172 12 15 367 4 348 4.43e-69 229
MsG0580025208.01.T01 MTR_5g092850 38.929 411 195 15 12 388 11 399 6.32e-69 223
MsG0580025208.01.T01 MTR_4g007940 41.880 351 165 13 68 392 5 342 1.08e-67 218
MsG0580025208.01.T01 MTR_6g090250 38.346 399 195 12 35 388 29 421 5.13e-67 218
MsG0580025208.01.T01 MTR_6g078010 39.255 349 177 11 54 386 1 330 9.19e-67 216
MsG0580025208.01.T01 MTR_7g111700 40.399 401 167 16 16 392 14 366 1.55e-66 216
MsG0580025208.01.T01 MTR_5g091140 40.000 375 169 13 16 365 47 390 1.67e-65 214
MsG0580025208.01.T01 MTR_5g068490 46.026 302 127 14 96 392 8 278 3.58e-65 209
MsG0580025208.01.T01 MTR_7g016930 40.566 318 153 7 14 321 13 304 3.99e-65 211
MsG0580025208.01.T01 MTR_5g074800 39.143 350 177 12 56 383 1 336 9.05e-65 210
MsG0580025208.01.T01 MTR_5g074850 39.651 401 187 18 1 368 23 401 5.91e-63 217
MsG0580025208.01.T01 MTR_1g007430 43.529 340 151 13 28 348 7 324 6.28e-63 205
MsG0580025208.01.T01 MTR_1g050312 42.308 312 139 10 77 380 6 284 6.20e-62 201
MsG0580025208.01.T01 MTR_8g063350 36.126 382 176 11 13 381 10 336 2.74e-61 201
MsG0580025208.01.T01 MTR_5g096900 43.614 321 144 10 14 313 9 313 1.09e-60 199
MsG0580025208.01.T01 MTR_5g075370 36.735 392 194 18 13 368 4 377 6.08e-56 196
MsG0580025208.01.T01 MTR_4g014370 34.197 386 181 10 14 392 19 338 8.08e-55 184
MsG0580025208.01.T01 MTR_6g079790 38.629 321 154 11 95 392 10 310 1.65e-54 182
MsG0580025208.01.T01 MTR_2g021920 45.798 238 102 8 172 387 37 269 1.70e-54 181
MsG0580025208.01.T01 MTR_5g064700 38.123 341 168 12 87 391 35 368 6.60e-54 182
MsG0580025208.01.T01 MTR_5g092860 37.097 372 173 15 24 366 9 348 1.05e-52 179
MsG0580025208.01.T01 MTR_6g004450 44.872 234 102 9 171 390 48 268 1.62e-52 176
MsG0580025208.01.T01 MTR_5g022850 32.836 402 185 11 15 392 14 354 1.65e-52 179
MsG0580025208.01.T01 MTR_5g076490 37.875 367 168 12 54 391 1 336 2.40e-52 177
MsG0580025208.01.T01 MTR_5g097820 39.394 264 132 8 10 255 16 269 1.64e-50 171
MsG0580025208.01.T01 MTR_5g086590 43.111 225 119 6 141 363 14 231 3.32e-50 169
MsG0580025208.01.T01 MTR_7g023800 36.000 350 165 12 56 388 1 308 5.48e-50 171
MsG0580025208.01.T01 MTR_6g087620 36.741 313 146 12 87 381 1 279 5.69e-50 170
MsG0580025208.01.T01 MTR_5g094350 38.328 287 129 7 11 269 7 273 2.50e-49 168
MsG0580025208.01.T01 MTR_7g104710 38.838 327 133 12 1 303 1 284 1.17e-48 167
MsG0580025208.01.T01 MTR_8g033000 34.748 377 193 11 54 391 1 363 1.85e-47 166
MsG0580025208.01.T01 MTR_1g076810 46.087 230 104 10 14 233 15 234 9.75e-45 164
MsG0580025208.01.T01 MTR_8g073570 47.953 171 79 3 15 183 8 170 8.55e-44 150
MsG0580025208.01.T01 MTR_6g070880 40.562 249 109 10 7 223 16 257 2.12e-43 152
MsG0580025208.01.T01 MTR_6g071420 40.562 249 109 10 7 223 16 257 2.12e-43 152
MsG0580025208.01.T01 MTR_4g016000 41.704 223 104 7 145 356 2 209 3.24e-43 150
MsG0580025208.01.T01 MTR_5g097850 37.589 282 118 9 116 390 14 244 6.15e-43 150
MsG0580025208.01.T01 MTR_5g037190 38.346 266 137 7 1 256 1 249 3.84e-41 145
MsG0580025208.01.T01 MTR_5g023970 44.103 195 98 6 203 392 9 197 1.09e-40 143
MsG0580025208.01.T01 MTR_6g090260 42.051 195 98 6 203 388 73 261 2.26e-40 144
MsG0580025208.01.T01 MTR_6g090260 57.576 66 24 1 1 66 8 69 9.85e-15 73.9
MsG0580025208.01.T01 MTR_6g465360 39.167 240 99 8 1 207 51 276 2.80e-40 144
MsG0580025208.01.T01 MTR_3g018750 39.600 250 112 10 171 391 2 241 5.52e-40 142
MsG0580025208.01.T01 MTR_5g098950 40.000 215 93 4 142 349 90 275 7.93e-39 140
MsG0580025208.01.T01 MTR_7g019250 38.865 229 115 5 154 373 206 418 7.58e-38 142
MsG0580025208.01.T01 MTR_1g115205 40.467 257 95 12 6 242 18 236 3.21e-37 135
MsG0580025208.01.T01 MTR_2g104260 37.455 275 131 11 17 262 14 276 4.51e-36 133
MsG0580025208.01.T01 MTR_3g019290 39.171 217 78 5 7 211 4 178 9.70e-35 127
MsG0580025208.01.T01 MTR_3g047580 48.101 158 47 5 1 154 1 127 2.12e-33 121
MsG0580025208.01.T01 MTR_6g009350 39.109 202 96 7 169 354 5 195 1.28e-32 121
MsG0580025208.01.T01 MTR_8g035690 36.232 276 125 10 153 390 40 302 7.70e-31 120
MsG0580025208.01.T01 MTR_6g079730 46.377 138 70 3 251 388 14 147 1.08e-29 112
MsG0580025208.01.T01 MTR_1g047080 30.747 348 168 12 54 392 1 284 5.95e-28 112
MsG0580025208.01.T01 MTR_7g017120 36.946 203 115 7 196 392 72 267 3.21e-27 109
MsG0580025208.01.T01 MTR_5g097650 42.405 158 70 7 4 157 9 149 6.69e-27 105
MsG0580025208.01.T01 MTR_7g017150 37.949 195 108 7 204 392 81 268 1.00e-26 107
MsG0580025208.01.T01 MTR_5g097540 42.466 146 75 3 204 348 96 233 3.72e-26 107
MsG0580025208.01.T01 MTR_5g096920 36.129 155 92 3 236 389 2 150 1.84e-25 101
MsG0580025208.01.T01 MTR_5g066420 43.939 132 67 4 251 380 23 149 1.53e-24 98.6
MsG0580025208.01.T01 MTR_3g030620 37.805 164 91 6 233 389 21 180 3.98e-23 95.9
MsG0580025208.01.T01 MTR_5g096070 38.012 171 68 6 14 180 23 159 1.34e-22 93.6
MsG0580025208.01.T01 MTR_2g022020 42.857 119 63 3 269 387 3 116 1.96e-22 92.0
MsG0580025208.01.T01 MTR_7g101200 36.866 217 98 11 142 347 40 228 3.96e-22 94.4
MsG0580025208.01.T01 MTR_2g046900 29.377 337 182 18 16 333 27 326 6.24e-21 94.0
MsG0580025208.01.T01 MTR_5g097660 41.964 112 63 2 278 388 7 117 4.33e-20 85.5
MsG0580025208.01.T01 MTR_1g050305 58.824 85 29 3 291 370 21 104 4.35e-19 83.6
MsG0580025208.01.T01 MTR_3g006670 28.371 356 192 14 17 353 49 360 6.64e-19 88.2
MsG0580025208.01.T01 MTR_2g024110 24.850 334 201 15 17 335 4 302 8.49e-19 87.4
MsG0580025208.01.T01 MTR_4g023090 25.501 349 221 10 4 343 5 323 2.34e-18 86.3
MsG0580025208.01.T01 MTR_4g094365 26.131 398 227 17 16 389 7 361 6.16e-18 84.7
MsG0580025208.01.T01 MTR_3g047540 45.000 80 44 0 201 280 2 81 6.98e-18 78.6
MsG0580025208.01.T01 MTR_1g037540 26.667 390 213 17 14 356 2 365 8.29e-18 84.7
MsG0580025208.01.T01 MTR_3g007360 29.697 330 174 17 25 332 60 353 9.78e-18 84.7
MsG0580025208.01.T01 MTR_4g133170 25.069 363 216 16 17 360 4 329 1.37e-17 84.0
MsG0580025208.01.T01 MTR_1g050542 26.209 393 217 18 17 384 58 402 2.01e-17 83.6
MsG0580025208.01.T01 MTR_8g041440 42.157 102 43 1 14 115 12 97 2.86e-17 77.8
MsG0580025208.01.T01 MTR_4g055060 26.332 319 194 12 17 323 30 319 5.67e-17 82.4
MsG0580025208.01.T01 MTR_3g013740 25.798 376 233 15 14 367 41 392 5.86e-17 82.4
MsG0580025208.01.T01 MTR_5g091150 36.957 184 74 8 116 296 40 184 7.51e-17 79.0
MsG0580025208.01.T01 MTR_3g007410 29.846 325 180 16 25 332 60 353 8.65e-17 81.6
MsG0580025208.01.T01 MTR_3g014540 26.250 320 192 13 17 325 29 315 9.45e-17 81.6
MsG0580025208.01.T01 MTR_1g054575 27.042 355 175 16 17 336 52 357 1.11e-16 82.4
MsG0580025208.01.T01 MTR_5g086780 53.846 78 35 1 286 363 148 224 1.28e-16 79.0
MsG0580025208.01.T01 MTR_5g086780 63.265 49 18 0 11 59 10 58 8.75e-11 62.0
MsG0580025208.01.T01 MTR_7g070440 25.405 370 210 13 15 353 5 339 1.49e-16 80.9
MsG0580025208.01.T01 MTR_2g426020 25.378 331 202 11 12 323 1 305 1.60e-16 80.9
MsG0580025208.01.T01 MTR_1g097560 24.808 391 228 15 11 384 30 371 1.82e-16 80.5
MsG0580025208.01.T01 MTR_4g117850 25.140 358 211 14 16 351 22 344 2.69e-16 80.1
MsG0580025208.01.T01 MTR_0627s0010 26.346 353 192 18 17 328 38 363 8.54e-16 79.0
MsG0580025208.01.T01 MTR_2g426060 25.183 409 239 17 12 386 1 376 1.28e-15 78.2
MsG0580025208.01.T01 MTR_3g083010 26.149 348 205 14 17 335 6 330 1.61e-15 78.2
MsG0580025208.01.T01 MTR_5g036250 51.807 83 38 2 301 383 23 103 2.13e-15 74.3
MsG0580025208.01.T01 MTR_3g014570 25.691 362 194 15 17 353 29 340 2.26e-15 77.4
MsG0580025208.01.T01 MTR_2g021050 24.865 370 218 16 17 367 5 333 2.32e-15 77.4
MsG0580025208.01.T01 MTR_2g046830 27.246 334 187 17 16 332 24 318 2.63e-15 77.4
MsG0580025208.01.T01 MTR_3g009310 25.153 326 199 13 17 333 42 331 2.95e-15 77.0
MsG0580025208.01.T01 MTR_3g007270 26.536 358 205 14 17 353 47 367 4.34e-15 76.6
MsG0580025208.01.T01 MTR_8g101580 25.272 368 209 17 2 346 30 354 4.39e-15 76.6
MsG0580025208.01.T01 MTR_4g116330 25.495 404 243 16 7 391 13 377 6.69e-15 75.9
MsG0580025208.01.T01 MTR_2g425980 24.874 398 251 14 14 386 2 376 8.04e-15 75.9
MsG0580025208.01.T01 MTR_7g055930 28.295 258 158 8 11 246 7 259 8.48e-15 75.9
MsG0580025208.01.T01 MTR_0667s0010 26.506 332 196 15 12 323 1 304 8.89e-15 75.9
MsG0580025208.01.T01 MTR_3g034130 26.271 354 200 19 16 343 8 326 9.98e-15 75.5
MsG0580025208.01.T01 MTR_7g407070 26.524 328 202 12 17 326 32 338 1.05e-14 75.5
MsG0580025208.01.T01 MTR_4g031770 25.538 325 187 12 17 325 4 289 1.71e-14 74.7
MsG0580025208.01.T01 MTR_2g025420 24.348 345 226 13 12 335 1 331 1.81e-14 75.1
MsG0580025208.01.T01 MTR_5g057790 26.480 321 188 11 17 325 46 330 2.13e-14 74.7
MsG0580025208.01.T01 MTR_2g026010 24.879 414 230 18 17 388 4 378 3.36e-14 73.9
MsG0580025208.01.T01 MTR_5g011200 23.098 368 236 13 1 356 1 333 3.86e-14 73.6
MsG0580025208.01.T01 MTR_4g023070 25.472 318 189 14 17 321 3 285 3.89e-14 73.6
MsG0580025208.01.T01 MTR_4g023120 26.266 316 185 15 17 319 3 283 4.04e-14 73.6
MsG0580025208.01.T01 MTR_4g070550 26.567 335 202 14 14 325 2 315 4.60e-14 73.6
MsG0580025208.01.T01 MTR_2g031720 23.200 375 240 15 12 367 1 346 5.35e-14 73.2
MsG0580025208.01.T01 MTR_4g021785 25.377 398 222 18 16 391 8 352 5.83e-14 72.8
MsG0580025208.01.T01 MTR_1g097490 25.135 370 218 16 11 364 43 369 8.17e-14 72.8
MsG0580025208.01.T01 MTR_3g007430 24.850 334 212 11 25 350 51 353 8.54e-14 72.8
MsG0580025208.01.T01 MTR_3g013770 24.661 369 183 14 3 334 19 329 8.74e-14 72.8
MsG0580025208.01.T01 MTR_4g023440 28.287 251 145 11 4 247 5 227 1.07e-13 72.0
MsG0580025208.01.T01 MTR_1g068860 24.800 375 220 17 17 367 4 340 1.46e-13 72.0
MsG0580025208.01.T01 MTR_7g055870 27.907 258 159 9 11 246 7 259 1.47e-13 72.0
MsG0580025208.01.T01 MTR_0707s0020 24.444 405 229 15 16 362 25 410 1.81e-13 72.0
MsG0580025208.01.T01 MTR_3g034160 25.387 323 195 15 16 321 8 301 1.91e-13 71.6
MsG0580025208.01.T01 MTR_3g058470 24.110 365 210 16 17 365 37 350 1.97e-13 71.6
MsG0580025208.01.T01 MTR_6g053260 26.154 325 187 14 17 325 337 624 2.02e-13 72.4
MsG0580025208.01.T01 MTR_8g467140 29.249 253 139 12 16 256 31 255 2.13e-13 70.9
MsG0580025208.01.T01 MTR_5g070080 23.951 405 244 15 16 389 9 380 2.25e-13 71.2
MsG0580025208.01.T01 MTR_6g087660 52.857 70 31 1 10 77 11 80 2.94e-13 68.6
MsG0580025208.01.T01 MTR_4g023080 23.797 395 231 15 16 391 8 351 2.97e-13 70.9
MsG0580025208.01.T01 MTR_1g068875 23.545 378 218 16 17 367 4 337 3.33e-13 70.9
MsG0580025208.01.T01 MTR_2g021190 23.367 398 231 16 1 380 1 342 3.40e-13 70.9
MsG0580025208.01.T01 MTR_1g094210 26.667 330 171 15 13 323 53 330 3.56e-13 70.9
MsG0580025208.01.T01 MTR_1g094210 26.667 330 171 15 13 323 53 330 3.74e-13 70.9
MsG0580025208.01.T01 MTR_3g436150 23.846 390 215 14 17 367 32 378 4.55e-13 70.5
MsG0580025208.01.T01 MTR_2g047832 26.857 350 188 19 16 332 28 342 4.85e-13 70.5
MsG0580025208.01.T01 MTR_6g086920 25.266 376 204 15 16 333 37 393 6.65e-13 70.5
MsG0580025208.01.T01 MTR_4g117770 24.694 409 237 18 8 391 2 364 8.81e-13 69.3
MsG0580025208.01.T01 MTR_4g117810 24.694 409 237 18 8 391 2 364 8.81e-13 69.3
MsG0580025208.01.T01 MTR_4g023150 24.937 397 246 16 6 391 2 357 8.95e-13 69.3
MsG0580025208.01.T01 MTR_4g118370 30.172 232 114 10 124 343 15 210 9.97e-13 68.2
MsG0580025208.01.T01 MTR_5g070088 24.938 405 249 14 13 389 3 380 1.02e-12 69.3
MsG0580025208.01.T01 MTR_6g048120 26.203 374 217 17 17 364 36 376 1.14e-12 69.3
MsG0580025208.01.T01 MTR_3g034180 25.000 332 203 15 7 321 113 415 1.17e-12 69.7
MsG0580025208.01.T01 MTR_4g116330 28.462 260 153 10 7 259 13 246 1.28e-12 68.9
MsG0580025208.01.T01 MTR_5g057710 26.398 322 187 14 17 325 46 330 1.35e-12 68.9
MsG0580025208.01.T01 MTR_5g010560 26.016 369 199 20 18 334 45 391 2.37e-12 68.6
MsG0580025208.01.T01 MTR_7g028660 24.479 384 229 18 13 366 7 359 2.46e-12 68.2
MsG0580025208.01.T01 MTR_5g021880 28.111 217 131 9 119 326 183 383 2.76e-12 68.6
MsG0580025208.01.T01 MTR_3g097190 50.000 58 28 1 310 367 28 84 2.85e-12 65.5
MsG0580025208.01.T01 MTR_5g021880 28.111 217 131 9 119 326 183 383 2.91e-12 68.2
MsG0580025208.01.T01 MTR_5g021880 28.111 217 131 9 119 326 183 383 3.34e-12 68.2
MsG0580025208.01.T01 MTR_4g117780 23.762 404 247 16 8 391 2 364 4.18e-12 67.4
MsG0580025208.01.T01 MTR_3g010590 23.397 312 196 9 17 325 39 310 4.76e-12 67.4
MsG0580025208.01.T01 MTR_3g030330 25.077 323 182 11 17 325 20 296 5.32e-12 67.0
MsG0580025208.01.T01 MTR_3g058440 27.092 251 156 10 15 256 33 265 5.48e-12 66.6
MsG0580025208.01.T01 MTR_6g053240 25.776 322 197 13 17 325 28 320 6.21e-12 67.0
MsG0580025208.01.T01 MTR_3g011100 27.545 334 174 17 17 325 235 525 6.61e-12 67.4
MsG0580025208.01.T01 MTR_4g134560 27.046 281 160 15 122 380 176 433 8.20e-12 67.0
MsG0580025208.01.T01 MTR_2g055970 28.137 263 145 14 8 256 202 434 8.38e-12 67.0
MsG0580025208.01.T01 MTR_5g021860 28.636 220 124 12 119 326 172 370 8.43e-12 67.0
MsG0580025208.01.T01 MTR_5g021860 28.636 220 124 12 119 326 172 370 8.53e-12 67.0
MsG0580025208.01.T01 MTR_1g009110 26.244 221 146 7 5 219 2 211 8.55e-12 66.6
MsG0580025208.01.T01 MTR_4g094400 37.615 109 49 4 231 323 6 111 9.19e-12 62.4
MsG0580025208.01.T01 MTR_4g027370 28.182 220 125 12 119 326 172 370 1.10e-11 66.6
MsG0580025208.01.T01 MTR_6g016285 26.254 339 197 13 17 326 21 335 1.22e-11 66.2
MsG0580025208.01.T01 MTR_1g055375 26.398 322 199 12 15 325 2 296 1.22e-11 65.9
MsG0580025208.01.T01 MTR_6g046320 23.164 354 213 16 17 326 39 377 1.51e-11 66.2
MsG0580025208.01.T01 MTR_7g055850 28.502 207 123 7 11 196 7 209 1.95e-11 64.7
MsG0580025208.01.T01 MTR_3g464500 25.911 247 155 9 6 246 16 240 2.21e-11 65.5
MsG0580025208.01.T01 MTR_2g025960 27.273 198 108 9 145 323 33 213 2.25e-11 64.7
MsG0580025208.01.T01 MTR_4g117430 35.507 138 68 8 143 273 16 139 2.54e-11 62.0
MsG0580025208.01.T01 MTR_2g031680 23.861 373 233 15 12 367 1 339 2.75e-11 65.1
MsG0580025208.01.T01 MTR_6g027910 23.099 355 216 17 20 353 12 330 2.90e-11 64.7
MsG0580025208.01.T01 MTR_2g047892 24.309 362 181 16 6 323 11 323 3.02e-11 65.1
MsG0580025208.01.T01 MTR_4g023190 24.937 397 245 16 6 391 2 356 3.95e-11 64.3
MsG0580025208.01.T01 MTR_5g022420 23.398 359 217 17 16 358 26 342 5.51e-11 63.9
MsG0580025208.01.T01 MTR_7g007300 25.000 320 185 12 17 325 103 378 6.30e-11 64.3
MsG0580025208.01.T01 MTR_3g083640 23.988 321 191 11 17 325 55 334 8.45e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025208.01.T01 AT3G06240 28.169 355 195 16 5 322 24 355 1.10e-23 102
MsG0580025208.01.T01 AT4G12560 22.693 401 258 15 17 392 4 377 4.42e-14 73.9
MsG0580025208.01.T01 AT4G12560 22.693 401 258 15 17 392 4 377 4.42e-14 73.9
MsG0580025208.01.T01 AT4G12560 22.693 401 258 15 17 392 4 377 4.42e-14 73.9
MsG0580025208.01.T01 AT3G16210 23.148 324 193 12 14 331 2 275 1.32e-11 65.9
MsG0580025208.01.T01 AT1G53550 23.636 275 167 11 17 280 35 277 8.32e-11 63.5

Find 78 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCTCAAATATCAATTT+TGG 0.072681 5:+15340816 MsG0580025208.01.T01:CDS
TTAAAACACCATTCCATTTC+TGG 0.118822 5:-15340574 None:intergenic
TGGAACGTTTATTTGCTTTC+TGG 0.200248 5:+15340160 MsG0580025208.01.T01:CDS
GCAGAACCCAAAACACTAAT+AGG 0.213860 5:-15340244 None:intergenic
TGTTAACCCTATTAGTGTTT+TGG 0.217140 5:+15340237 MsG0580025208.01.T01:CDS
TTTCCTTGTAAATAACTATC+TGG 0.237468 5:-15341032 None:intergenic
GTTGATCTGACGATGTTAAA+TGG 0.246131 5:+15340757 MsG0580025208.01.T01:CDS
AGCATCTGGGTCCTGATAAT+TGG 0.255119 5:+15340140 MsG0580025208.01.T01:CDS
GTGTCAAGCCGGATCCCTTT+TGG 0.280617 5:+15340500 MsG0580025208.01.T01:CDS
TTGCCACCCATTCCAGAGTT+TGG 0.317019 5:+15340214 MsG0580025208.01.T01:CDS
AACAGATGAGAAGAAGAAAA+AGG 0.328905 5:+15339916 MsG0580025208.01.T01:CDS
TCTCGTTCTAAAACAGCATC+TGG 0.341822 5:+15340126 MsG0580025208.01.T01:CDS
AAATAAACGTTCCAATTATC+AGG 0.351173 5:-15340151 None:intergenic
ATGGGGTGTGTCATTGGTGG+GGG 0.360485 5:+15340614 MsG0580025208.01.T01:CDS
AACAGTGATGTGTACTTCAA+TGG 0.378393 5:+15340595 MsG0580025208.01.T01:CDS
AATGGGGTGTGTCATTGGTG+GGG 0.380934 5:+15340613 MsG0580025208.01.T01:CDS
TTTCTTGTGTTCACAAATCA+TGG 0.385617 5:+15340017 MsG0580025208.01.T01:CDS
AAACGCTTAACAGATTTAAC+AGG 0.386399 5:-15339995 None:intergenic
ACTTTCATTTCCCCGGTGGC+AGG 0.388834 5:-15340343 None:intergenic
TAAACTATATATCTCCCAAA+AGG 0.397637 5:-15340515 None:intergenic
ACTTCAATGGGGTGTGTCAT+TGG 0.410415 5:+15340608 MsG0580025208.01.T01:CDS
CAATGGGGTGTGTCATTGGT+GGG 0.434756 5:+15340612 MsG0580025208.01.T01:CDS
TCAATGGGGTGTGTCATTGG+TGG 0.446446 5:+15340611 MsG0580025208.01.T01:CDS
TTCCTTGTAAATAACTATCT+GGG 0.455254 5:-15341031 None:intergenic
CAGAACCCAAAACACTAATA+GGG 0.460452 5:-15340243 None:intergenic
GCTTGTTTAGATTTAGCTAC+CGG 0.460627 5:+15340967 MsG0580025208.01.T01:CDS
ACAGTGATGTGTACTTCAAT+GGG 0.469430 5:+15340596 MsG0580025208.01.T01:CDS
AAACTATATATCTCCCAAAA+GGG 0.486468 5:-15340514 None:intergenic
ATGAGATTTGAATATGAGAT+TGG 0.488462 5:-15340083 None:intergenic
AACTTGGTGTCAAGGAATCA+TGG 0.489261 5:+15340842 MsG0580025208.01.T01:CDS
TTGATCTGACGATGTTAAAT+GGG 0.503281 5:+15340758 MsG0580025208.01.T01:CDS
AGGAATGACTTTCATTTCCC+CGG 0.504576 5:-15340350 None:intergenic
TTTGGGTGAACTTGGTGTCA+AGG 0.504706 5:+15340834 MsG0580025208.01.T01:CDS
TGGGGTGTGTCATTGGTGGG+GGG 0.510206 5:+15340615 MsG0580025208.01.T01:CDS
TCCTATCGGAGTAGGGAAGA+AGG 0.511386 5:+15340906 MsG0580025208.01.T01:CDS
CCCTTCTTCCCTACTCCGAT+AGG 0.514427 5:-15340907 None:intergenic
TATATCTCCCAAAAGGGATC+CGG 0.517462 5:-15340508 None:intergenic
TTAACACCAAACTCTGGAAT+GGG 0.519590 5:-15340220 None:intergenic
CTTTCATTTCCCCGGTGGCA+GGG 0.530745 5:-15340342 None:intergenic
TTACATAATACAGCAAATAC+AGG 0.532461 5:-15340319 None:intergenic
GGCCCAGATAGTTATTTACA+AGG 0.532597 5:+15341029 MsG0580025208.01.T01:CDS
CTTGTTTAGATTTAGCTACC+GGG 0.533159 5:+15340968 MsG0580025208.01.T01:CDS
GTTAACACCAAACTCTGGAA+TGG 0.537102 5:-15340221 None:intergenic
ATCTAATGATGGTGTCAAGC+CGG 0.538693 5:+15340489 MsG0580025208.01.T01:CDS
TATTCTACTGAATCTAATGA+TGG 0.540377 5:+15340478 MsG0580025208.01.T01:CDS
TTAGTCCTTTGATCGGATGA+AGG 0.542660 5:-15341056 None:intergenic
TAATTGTTTAGTCCTTTGAT+CGG 0.542805 5:-15341063 None:intergenic
AAAATTTCAGTGGTAAACTC+AGG 0.543205 5:-15340394 None:intergenic
ACTATCAAATGAATCTTCTG+AGG 0.543421 5:-15340707 None:intergenic
ATTAAGCATCCTATCGGAGT+AGG 0.547879 5:+15340898 MsG0580025208.01.T01:CDS
GGTTGAAACTCAGCAAGACT+AGG 0.554879 5:-15340373 None:intergenic
GTATTATGTAACCCTGCCAC+CGG 0.559940 5:+15340331 MsG0580025208.01.T01:CDS
CTTTATAGTCGTCTCTAACA+TGG 0.561393 5:-15340438 None:intergenic
ATAGGGTTAACACCAAACTC+TGG 0.563076 5:-15340226 None:intergenic
CTATAAAGTCATTCAAATTG+TGG 0.564912 5:+15340453 MsG0580025208.01.T01:CDS
TATTATGTAACCCTGCCACC+GGG 0.566531 5:+15340332 MsG0580025208.01.T01:CDS
GAAAACCTTCATCCGATCAA+AGG 0.570664 5:+15341051 MsG0580025208.01.T01:CDS
TTAAGCATCCTATCGGAGTA+GGG 0.578277 5:+15340899 MsG0580025208.01.T01:CDS
CCTATCGGAGTAGGGAAGAA+GGG 0.578979 5:+15340907 MsG0580025208.01.T01:CDS
CTATCAAATGAATCTTCTGA+GGG 0.580878 5:-15340706 None:intergenic
CTCGTTCTAAAACAGCATCT+GGG 0.594954 5:+15340127 MsG0580025208.01.T01:CDS
TCTTGCATTAAGCATCCTAT+CGG 0.602821 5:+15340892 MsG0580025208.01.T01:CDS
AGGATGCTTAATGCAAGACA+AGG 0.603387 5:-15340887 None:intergenic
AATGAATCTTCTGAGGGTGG+AGG 0.608981 5:-15340700 None:intergenic
TTGATATGCCAGAAATGGAA+TGG 0.612721 5:+15340566 MsG0580025208.01.T01:CDS
TCAAATGAATCTTCTGAGGG+TGG 0.617865 5:-15340703 None:intergenic
TGCAAGACAAGGGCTCAACA+TGG 0.621341 5:-15340876 None:intergenic
ACACCAAACTCTGGAATGGG+TGG 0.622669 5:-15340217 None:intergenic
TGTTGAAGTAATGCAATATG+AGG 0.624415 5:+15341008 MsG0580025208.01.T01:CDS
TGAAACTCAGCAAGACTAGG+AGG 0.652522 5:-15340370 None:intergenic
ATCAATCTTCTCAATCACCC+CGG 0.662077 5:-15340986 None:intergenic
AGACGTGTATCATCGTAGAG+TGG 0.680279 5:-15340106 None:intergenic
TTGTTTAGATTTAGCTACCG+GGG 0.683694 5:+15340969 MsG0580025208.01.T01:CDS
GGATGCTTAATGCAAGACAA+GGG 0.705661 5:-15340886 None:intergenic
ATTTGAATATGAGATTGGTG+CGG 0.722141 5:-15340078 None:intergenic
AATGACTTTCATTTCCCCGG+TGG 0.738408 5:-15340347 None:intergenic
ATTATGTAACCCTGCCACCG+GGG 0.770468 5:+15340333 MsG0580025208.01.T01:CDS
CAGTGATGTGTACTTCAATG+GGG 0.772661 5:+15340597 MsG0580025208.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAATAATCAAAGATTTT+TGG + Chr5:15340639-15340658 MsG0580025208.01.T01:CDS 15.0%
!! ATAGTTTAAAAACTAACTCA+TGG + Chr5:15340530-15340549 MsG0580025208.01.T01:CDS 20.0%
!!! TCTTCTCAAATATCAATTTT+GGG + Chr5:15340817-15340836 MsG0580025208.01.T01:CDS 20.0%
! AAACTATATATCTCCCAAAA+GGG - Chr5:15340517-15340536 None:intergenic 25.0%
! AAATAAACGTTCCAATTATC+AGG - Chr5:15340154-15340173 None:intergenic 25.0%
! ATGAGATTTGAATATGAGAT+TGG - Chr5:15340086-15340105 None:intergenic 25.0%
! CTATAAAGTCATTCAAATTG+TGG + Chr5:15340453-15340472 MsG0580025208.01.T01:CDS 25.0%
! GGAACATGTTCATAAAAATA+GGG - Chr5:15340060-15340079 None:intergenic 25.0%
! TAAACTATATATCTCCCAAA+AGG - Chr5:15340518-15340537 None:intergenic 25.0%
! TAATTGTTTAGTCCTTTGAT+CGG - Chr5:15341066-15341085 None:intergenic 25.0%
! TATTCTACTGAATCTAATGA+TGG + Chr5:15340478-15340497 MsG0580025208.01.T01:CDS 25.0%
! TTACATAATACAGCAAATAC+AGG - Chr5:15340322-15340341 None:intergenic 25.0%
! TTCCTTGTAAATAACTATCT+GGG - Chr5:15341034-15341053 None:intergenic 25.0%
! TTTCCTTGTAAATAACTATC+TGG - Chr5:15341035-15341054 None:intergenic 25.0%
!! GTCTTCTCAAATATCAATTT+TGG + Chr5:15340816-15340835 MsG0580025208.01.T01:CDS 25.0%
AAAATTTCAGTGGTAAACTC+AGG - Chr5:15340397-15340416 None:intergenic 30.0%
AAACGCTTAACAGATTTAAC+AGG - Chr5:15339998-15340017 None:intergenic 30.0%
AACAGATGAGAAGAAGAAAA+AGG + Chr5:15339916-15339935 MsG0580025208.01.T01:CDS 30.0%
ACTATCAAATGAATCTTCTG+AGG - Chr5:15340710-15340729 None:intergenic 30.0%
ATACAAAAAGCAATGTCATC+TGG - Chr5:15339962-15339981 None:intergenic 30.0%
ATTTGAATATGAGATTGGTG+CGG - Chr5:15340081-15340100 None:intergenic 30.0%
CGGAACATGTTCATAAAAAT+AGG - Chr5:15340061-15340080 None:intergenic 30.0%
CTATCAAATGAATCTTCTGA+GGG - Chr5:15340709-15340728 None:intergenic 30.0%
TGTTGAAGTAATGCAATATG+AGG + Chr5:15341008-15341027 MsG0580025208.01.T01:CDS 30.0%
TTAAAACACCATTCCATTTC+TGG - Chr5:15340577-15340596 None:intergenic 30.0%
TTGATCTGACGATGTTAAAT+GGG + Chr5:15340758-15340777 MsG0580025208.01.T01:CDS 30.0%
TTTCTTGTGTTCACAAATCA+TGG + Chr5:15340017-15340036 MsG0580025208.01.T01:CDS 30.0%
! ACCACTGAAATTTTTCTTCA+TGG + Chr5:15340403-15340422 MsG0580025208.01.T01:CDS 30.0%
! CCACTGAAATTTTTCTTCAT+GGG + Chr5:15340404-15340423 MsG0580025208.01.T01:CDS 30.0%
! GAAATTTTTCTTCATGGGTT+TGG + Chr5:15340409-15340428 MsG0580025208.01.T01:CDS 30.0%
! GTTAACCCTATTAGTGTTTT+GGG + Chr5:15340238-15340257 MsG0580025208.01.T01:CDS 30.0%
! TGTTAACCCTATTAGTGTTT+TGG + Chr5:15340237-15340256 MsG0580025208.01.T01:CDS 30.0%
! TTTTTCTTCTTCTCATCTGT+TGG - Chr5:15339917-15339936 None:intergenic 30.0%
!! ATATCAATTTTGGGTGAACT+TGG + Chr5:15340826-15340845 MsG0580025208.01.T01:CDS 30.0%
!! CAATTTTGATATGCCAGAAA+TGG + Chr5:15340561-15340580 MsG0580025208.01.T01:CDS 30.0%
!!! TAGTTTTGATGTTGATCTGA+CGG + Chr5:15340726-15340745 MsG0580025208.01.T01:CDS 30.0%
AACAGTGATGTGTACTTCAA+TGG + Chr5:15340595-15340614 MsG0580025208.01.T01:CDS 35.0%
ACAGTGATGTGTACTTCAAT+GGG + Chr5:15340596-15340615 MsG0580025208.01.T01:CDS 35.0%
AGATGAGAAGAAGAAAAAGG+AGG + Chr5:15339919-15339938 MsG0580025208.01.T01:CDS 35.0%
CAGAACCCAAAACACTAATA+GGG - Chr5:15340246-15340265 None:intergenic 35.0%
CCCATGAAGAAAAATTTCAG+TGG - Chr5:15340407-15340426 None:intergenic 35.0%
CTTGTTTAGATTTAGCTACC+GGG + Chr5:15340968-15340987 MsG0580025208.01.T01:CDS 35.0%
CTTTATAGTCGTCTCTAACA+TGG - Chr5:15340441-15340460 None:intergenic 35.0%
GCTTGTTTAGATTTAGCTAC+CGG + Chr5:15340967-15340986 MsG0580025208.01.T01:CDS 35.0%
GTTGATCTGACGATGTTAAA+TGG + Chr5:15340757-15340776 MsG0580025208.01.T01:CDS 35.0%
TCTTGCATTAAGCATCCTAT+CGG + Chr5:15340892-15340911 MsG0580025208.01.T01:CDS 35.0%
TGGAACGTTTATTTGCTTTC+TGG + Chr5:15340160-15340179 MsG0580025208.01.T01:CDS 35.0%
TTGATATGCCAGAAATGGAA+TGG + Chr5:15340566-15340585 MsG0580025208.01.T01:CDS 35.0%
TTGTTTAGATTTAGCTACCG+GGG + Chr5:15340969-15340988 MsG0580025208.01.T01:CDS 35.0%
!! AGTTTTGATGTTGATCTGAC+GGG + Chr5:15340727-15340746 MsG0580025208.01.T01:CDS 35.0%
!! TTAACACCAAACTCTGGAAT+GGG - Chr5:15340223-15340242 None:intergenic 35.0%
!!! GTTTTGGGTTCTGCTATTAA+TGG + Chr5:15340253-15340272 MsG0580025208.01.T01:CDS 35.0%
AGGAATGACTTTCATTTCCC+CGG - Chr5:15340353-15340372 None:intergenic 40.0%
AGGATGCTTAATGCAAGACA+AGG - Chr5:15340890-15340909 None:intergenic 40.0%
ATAGGGTTAACACCAAACTC+TGG - Chr5:15340229-15340248 None:intergenic 40.0%
ATCAATCTTCTCAATCACCC+CGG - Chr5:15340989-15341008 None:intergenic 40.0%
ATTAAGCATCCTATCGGAGT+AGG + Chr5:15340898-15340917 MsG0580025208.01.T01:CDS 40.0%
CAGTGATGTGTACTTCAATG+GGG + Chr5:15340597-15340616 MsG0580025208.01.T01:CDS 40.0%
GAAAACCTTCATCCGATCAA+AGG + Chr5:15341051-15341070 MsG0580025208.01.T01:CDS 40.0%
GCAGAACCCAAAACACTAAT+AGG - Chr5:15340247-15340266 None:intergenic 40.0%
GGATGCTTAATGCAAGACAA+GGG - Chr5:15340889-15340908 None:intergenic 40.0%
GGCCCAGATAGTTATTTACA+AGG + Chr5:15341029-15341048 MsG0580025208.01.T01:CDS 40.0%
TATATCTCCCAAAAGGGATC+CGG - Chr5:15340511-15340530 None:intergenic 40.0%
TTAAGCATCCTATCGGAGTA+GGG + Chr5:15340899-15340918 MsG0580025208.01.T01:CDS 40.0%
TTAGTCCTTTGATCGGATGA+AGG - Chr5:15341059-15341078 None:intergenic 40.0%
! ATCTAATGATGGTGTCAAGC+CGG + Chr5:15340489-15340508 MsG0580025208.01.T01:CDS 40.0%
! GTTAACACCAAACTCTGGAA+TGG - Chr5:15340224-15340243 None:intergenic 40.0%
! TCAAATGAATCTTCTGAGGG+TGG - Chr5:15340706-15340725 None:intergenic 40.0%
!! AACTTGGTGTCAAGGAATCA+TGG + Chr5:15340842-15340861 MsG0580025208.01.T01:CDS 40.0%
!! CTCGTTCTAAAACAGCATCT+GGG + Chr5:15340127-15340146 MsG0580025208.01.T01:CDS 40.0%
!! TCTCGTTCTAAAACAGCATC+TGG + Chr5:15340126-15340145 MsG0580025208.01.T01:CDS 40.0%
AATGACTTTCATTTCCCCGG+TGG - Chr5:15340350-15340369 None:intergenic 45.0%
ACTTCAATGGGGTGTGTCAT+TGG + Chr5:15340608-15340627 MsG0580025208.01.T01:CDS 45.0%
AGACGTGTATCATCGTAGAG+TGG - Chr5:15340109-15340128 None:intergenic 45.0%
AGCATCTGGGTCCTGATAAT+TGG + Chr5:15340140-15340159 MsG0580025208.01.T01:CDS 45.0%
GGTTGAAACTCAGCAAGACT+AGG - Chr5:15340376-15340395 None:intergenic 45.0%
GTATTATGTAACCCTGCCAC+CGG + Chr5:15340331-15340350 MsG0580025208.01.T01:CDS 45.0%
TATTATGTAACCCTGCCACC+GGG + Chr5:15340332-15340351 MsG0580025208.01.T01:CDS 45.0%
TGAAACTCAGCAAGACTAGG+AGG - Chr5:15340373-15340392 None:intergenic 45.0%
! AATGAATCTTCTGAGGGTGG+AGG - Chr5:15340703-15340722 None:intergenic 45.0%
!! TTTGGGTGAACTTGGTGTCA+AGG + Chr5:15340834-15340853 MsG0580025208.01.T01:CDS 45.0%
ATTATGTAACCCTGCCACCG+GGG + Chr5:15340333-15340352 MsG0580025208.01.T01:CDS 50.0%
CCTATCGGAGTAGGGAAGAA+GGG + Chr5:15340907-15340926 MsG0580025208.01.T01:CDS 50.0%
TCCTATCGGAGTAGGGAAGA+AGG + Chr5:15340906-15340925 MsG0580025208.01.T01:CDS 50.0%
TGCAAGACAAGGGCTCAACA+TGG - Chr5:15340879-15340898 None:intergenic 50.0%
TTGCCACCCATTCCAGAGTT+TGG + Chr5:15340214-15340233 MsG0580025208.01.T01:CDS 50.0%
! AATGGGGTGTGTCATTGGTG+GGG + Chr5:15340613-15340632 MsG0580025208.01.T01:CDS 50.0%
! CAATGGGGTGTGTCATTGGT+GGG + Chr5:15340612-15340631 MsG0580025208.01.T01:CDS 50.0%
! TCAATGGGGTGTGTCATTGG+TGG + Chr5:15340611-15340630 MsG0580025208.01.T01:CDS 50.0%
! TGTCAAGCCGGATCCCTTTT+GGG + Chr5:15340501-15340520 MsG0580025208.01.T01:CDS 50.0%
!! ACACCAAACTCTGGAATGGG+TGG - Chr5:15340220-15340239 None:intergenic 50.0%
ACTTTCATTTCCCCGGTGGC+AGG - Chr5:15340346-15340365 None:intergenic 55.0%
CCCTTCTTCCCTACTCCGAT+AGG - Chr5:15340910-15340929 None:intergenic 55.0%
CTTTCATTTCCCCGGTGGCA+GGG - Chr5:15340345-15340364 None:intergenic 55.0%
! ATGGGGTGTGTCATTGGTGG+GGG + Chr5:15340614-15340633 MsG0580025208.01.T01:CDS 55.0%
! GTGTCAAGCCGGATCCCTTT+TGG + Chr5:15340500-15340519 MsG0580025208.01.T01:CDS 55.0%
! TGGGGTGTGTCATTGGTGGG+GGG + Chr5:15340615-15340634 MsG0580025208.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 15339908 15341086 15339908 ID=MsG0580025208.01;Name=MsG0580025208.01
Chr5 mRNA 15339908 15341086 15339908 ID=MsG0580025208.01.T01;Parent=MsG0580025208.01;Name=MsG0580025208.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|392
Chr5 exon 15339908 15341086 15339908 ID=MsG0580025208.01.T01:exon:6203;Parent=MsG0580025208.01.T01
Chr5 CDS 15339908 15341086 15339908 ID=MsG0580025208.01.T01:cds;Parent=MsG0580025208.01.T01
Gene Sequence

>MsG0580025208.01.T01

ATGTCTCCAACAGATGAGAAGAAGAAAAAGGAGGTTAGTAGTAGCTATATACCAGATGACATTGCTTTTTGTATTCTCTCTAAACTTCCTGTTAAATCTGTTAAGCGTTTTTCTTGTGTTCACAAATCATGGTCTCTTTTGTTTGAAAACCCTATTTTTATGAACATGTTCCGCACCAATCTCATATTCAAATCTCATCCACTCTACGATGATACACGTCTCGTTCTAAAACAGCATCTGGGTCCTGATAATTGGAACGTTTATTTGCTTTCTGGAGATAAGTTTGAGAATAAAGTGAAATTTGATTTGCCACCCATTCCAGAGTTTGGTGTTAACCCTATTAGTGTTTTGGGTTCTGCTATTAATGGTGTTCTTTGTCTTCACGATTACGATGATACTCGTACAACATCACCTGTATTTGCTGTATTATGTAACCCTGCCACCGGGGAAATGAAAGTCATTCCTCCTAGTCTTGCTGAGTTTCAACCTGAGTTTACCACTGAAATTTTTCTTCATGGGTTTGGATATGACCATGTTAGAGACGACTATAAAGTCATTCAAATTGTGGAGTATTCTACTGAATCTAATGATGGTGTCAAGCCGGATCCCTTTTGGGAGATATATAGTTTAAAAACTAACTCATGGACAAAGATCAATTTTGATATGCCAGAAATGGAATGGTGTTTTAACAGTGATGTGTACTTCAATGGGGTGTGTCATTGGTGGGGGGAAAGAAATAATCAAAGATTTTTGGTGTCATTTAACTTGTGCAATGATGTGTGCGTTCTTACACCTCCACCCTCAGAAGATTCATTTGATAGTTTTGATGTTGATCTGACGGGTTTTTATGTTGATCTGACGATGTTAAATGGGTTTGTTGCTATTATAACTTATTGCAAAAAGACTAAGTCTTCTCAAATATCAATTTTGGGTGAACTTGGTGTCAAGGAATCATGGATTAGACTCTTCCATGTTGAGCCCTTGTCTTGCATTAAGCATCCTATCGGAGTAGGGAAGAAGGGAAATATATTCTTCATAAAAAAAGAAGATGATGAACTAGCTTGTTTAGATTTAGCTACCGGGGTGATTGAGAAGATTGATGTTGAAGTAATGCAATATGAGGCCCAGATAGTTATTTACAAGGAAAACCTTCATCCGATCAAAGGACTAAACAATTAA
Protein sequence

>MsG0580025208.01.T01

MSPTDEKKKKEVSSSYIPDDIAFCILSKLPVKSVKRFSCVHKSWSLLFENPIFMNMFRTNLIFKSHPLYDDTRLVLKQHLGPDNWNVYLLSGDKFENKVKFDLPPIPEFGVNPISVLGSAINGVLCLHDYDDTRTTSPVFAVLCNPATGEMKVIPPSLAEFQPEFTTEIFLHGFGYDHVRDDYKVIQIVEYSTESNDGVKPDPFWEIYSLKTNSWTKINFDMPEMEWCFNSDVYFNGVCHWWGERNNQRFLVSFNLCNDVCVLTPPPSEDSFDSFDVDLTGFYVDLTMLNGFVAIITYCKKTKSSQISILGELGVKESWIRLFHVEPLSCIKHPIGVGKKGNIFFIKKEDDELACLDLATGVIEKIDVEVMQYEAQIVIYKENLHPIKGLNN*