AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029360.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029360.01.T01 MTR_5g096910 76.263 396 85 6 1 392 1 391 0.0 565
MsG0580029360.01.T01 MTR_5g037680 47.631 401 161 15 13 388 4 380 7.22e-105 317
MsG0580029360.01.T01 MTR_5g059430 45.169 414 190 14 10 393 19 425 1.50e-97 297
MsG0580029360.01.T01 MTR_6g086825 44.787 422 182 14 3 392 56 458 1.24e-96 296
MsG0580029360.01.T01 MTR_2g038680 43.692 428 176 16 6 392 6 409 4.40e-96 293
MsG0580029360.01.T01 MTR_0129s0070 44.361 399 182 13 14 391 14 393 1.03e-94 289
MsG0580029360.01.T01 MTR_7g017130 44.784 393 185 11 17 392 18 395 1.09e-94 289
MsG0580029360.01.T01 MTR_5g097330 45.771 402 178 15 14 390 13 399 1.40e-94 289
MsG0580029360.01.T01 MTR_5g069390 45.387 401 193 13 13 393 22 416 1.93e-93 289
MsG0580029360.01.T01 MTR_7g017170 43.457 405 185 12 17 392 18 407 7.06e-92 282
MsG0580029360.01.T01 MTR_4g130330 44.878 410 173 12 13 392 3 389 1.08e-90 279
MsG0580029360.01.T01 MTR_0129s0120 43.073 397 188 12 14 390 14 392 1.13e-90 279
MsG0580029360.01.T01 MTR_7g017040 43.392 401 184 10 15 391 14 395 1.14e-90 279
MsG0580029360.01.T01 MTR_4g028680 43.689 412 193 13 4 392 3 398 1.32e-90 279
MsG0580029360.01.T01 MTR_0134s0060 42.417 422 182 12 15 394 10 412 2.52e-90 278
MsG0580029360.01.T01 MTR_3g011120 43.750 384 183 10 12 384 9 370 3.80e-90 276
MsG0580029360.01.T01 MTR_6g090180 43.675 419 192 12 1 390 31 434 1.85e-89 277
MsG0580029360.01.T01 MTR_8g012090 45.478 387 134 15 1 363 1 334 4.40e-89 273
MsG0580029360.01.T01 MTR_4g028510 43.468 421 167 16 12 392 11 400 9.88e-89 276
MsG0580029360.01.T01 MTR_5g096920 86.842 152 19 1 244 394 1 152 1.28e-88 265
MsG0580029360.01.T01 MTR_0054s0090 44.235 425 183 14 1 392 1 404 1.67e-88 273
MsG0580029360.01.T01 MTR_8g063440 42.239 393 191 10 14 391 9 380 1.75e-88 273
MsG0580029360.01.T01 MTR_0054s0100 44.366 426 183 15 1 392 1 406 2.70e-88 273
MsG0580029360.01.T01 MTR_2g022000 43.276 409 181 13 1 372 1 395 6.26e-88 273
MsG0580029360.01.T01 MTR_6g079810 43.091 427 189 14 1 392 54 461 2.22e-87 273
MsG0580029360.01.T01 MTR_6g079770 41.981 424 179 13 15 393 15 416 3.15e-86 268
MsG0580029360.01.T01 MTR_4g102410 43.099 413 195 13 6 392 50 448 6.74e-86 268
MsG0580029360.01.T01 MTR_2g066170 40.842 404 205 12 3 392 1 384 7.74e-86 266
MsG0580029360.01.T01 MTR_4g117550 40.196 408 191 12 1 392 1 371 5.88e-85 263
MsG0580029360.01.T01 MTR_0129s0050 41.205 415 189 11 14 392 11 406 7.61e-85 264
MsG0580029360.01.T01 MTR_6g080680 42.206 417 174 13 8 388 4 389 1.26e-83 261
MsG0580029360.01.T01 MTR_2g066200 41.045 402 204 11 7 392 2 386 1.60e-83 260
MsG0580029360.01.T01 MTR_4g028660 41.912 408 201 13 4 390 3 395 2.92e-83 259
MsG0580029360.01.T01 MTR_4g027450 41.912 408 201 13 4 390 3 395 2.92e-83 259
MsG0580029360.01.T01 MTR_2g034700 42.448 384 190 11 12 387 9 369 2.98e-83 259
MsG0580029360.01.T01 MTR_5g097680 40.984 427 187 13 15 392 15 425 5.33e-83 260
MsG0580029360.01.T01 MTR_2g021800 40.476 420 204 12 1 386 1 408 1.27e-82 259
MsG0580029360.01.T01 MTR_2g021950 42.821 397 189 12 15 390 14 393 1.91e-82 258
MsG0580029360.01.T01 MTR_2g065840 39.043 397 202 10 16 392 11 387 2.87e-81 254
MsG0580029360.01.T01 MTR_8g464770 42.894 387 188 13 14 388 9 374 8.13e-81 253
MsG0580029360.01.T01 MTR_5g096630 42.998 407 189 11 17 392 18 412 8.87e-81 254
MsG0580029360.01.T01 MTR_5g097220 40.476 420 182 13 14 390 10 404 1.59e-80 253
MsG0580029360.01.T01 MTR_5g097350 42.021 376 190 12 26 390 25 383 4.11e-80 251
MsG0580029360.01.T01 MTR_6g461660 43.939 396 188 12 14 390 16 396 8.66e-80 251
MsG0580029360.01.T01 MTR_8g046310 40.909 396 199 10 4 389 3 373 1.48e-79 249
MsG0580029360.01.T01 MTR_5g096900 49.691 324 123 13 14 316 9 313 5.32e-79 246
MsG0580029360.01.T01 MTR_1g053510 39.573 422 199 13 3 389 1 401 9.04e-79 248
MsG0580029360.01.T01 MTR_8g039500 43.501 377 166 15 3 363 1 346 1.10e-78 246
MsG0580029360.01.T01 MTR_6g478230 41.706 422 179 14 6 392 16 405 3.28e-78 247
MsG0580029360.01.T01 MTR_4g055820 42.234 367 162 12 14 349 11 358 3.52e-78 245
MsG0580029360.01.T01 MTR_2g065860 39.348 399 201 10 14 392 9 386 5.04e-78 246
MsG0580029360.01.T01 MTR_7g069550 39.850 399 196 14 14 386 11 391 3.83e-77 244
MsG0580029360.01.T01 MTR_8g041270 41.320 409 192 15 15 392 13 404 4.87e-76 241
MsG0580029360.01.T01 MTR_5g091140 41.505 412 175 16 2 384 33 407 9.99e-76 241
MsG0580029360.01.T01 MTR_1g007450 41.514 383 177 13 17 372 12 374 1.31e-75 241
MsG0580029360.01.T01 MTR_5g092850 38.208 424 197 12 4 390 3 398 5.44e-75 239
MsG0580029360.01.T01 MTR_2g104340 39.558 407 193 15 15 392 12 394 4.66e-74 236
MsG0580029360.01.T01 MTR_8g033140 36.019 422 208 12 13 392 15 416 6.74e-74 236
MsG0580029360.01.T01 MTR_8g064890 39.949 393 207 11 12 392 11 386 8.05e-74 235
MsG0580029360.01.T01 MTR_8g033110 39.161 429 201 15 6 392 3 413 1.19e-73 236
MsG0580029360.01.T01 MTR_2g066150 37.940 398 199 10 3 392 1 358 2.04e-73 233
MsG0580029360.01.T01 MTR_8g467670 37.532 389 215 11 12 392 9 377 2.25e-73 234
MsG0580029360.01.T01 MTR_8g046200 38.161 435 200 14 4 389 3 417 2.42e-73 235
MsG0580029360.01.T01 MTR_5g024260 38.272 405 200 16 1 376 5 388 4.67e-73 234
MsG0580029360.01.T01 MTR_5g072060 39.583 384 169 12 12 369 1 347 5.78e-73 239
MsG0580029360.01.T01 MTR_1g007410 41.397 401 186 15 14 386 19 398 6.90e-73 233
MsG0580029360.01.T01 MTR_0831s0010 37.879 396 206 11 13 391 46 418 1.04e-72 233
MsG0580029360.01.T01 MTR_8g032980 36.916 428 200 10 13 391 12 418 1.83e-72 233
MsG0580029360.01.T01 MTR_2g021770 37.164 409 203 12 20 392 15 405 1.95e-72 232
MsG0580029360.01.T01 MTR_4g028750 41.645 377 173 13 13 363 12 367 3.20e-72 231
MsG0580029360.01.T01 MTR_2g104280 39.173 411 198 15 15 392 12 403 3.62e-72 231
MsG0580029360.01.T01 MTR_8g046220 37.204 422 187 12 13 389 13 401 4.82e-71 228
MsG0580029360.01.T01 MTR_7g079640 40.323 372 174 12 16 370 12 352 5.33e-71 228
MsG0580029360.01.T01 MTR_5g074850 40.347 404 175 14 6 370 24 400 3.23e-70 238
MsG0580029360.01.T01 MTR_8g018110 36.691 417 210 15 6 392 3 395 9.33e-68 220
MsG0580029360.01.T01 MTR_7g111700 39.756 410 180 16 1 391 1 362 1.88e-67 218
MsG0580029360.01.T01 MTR_8g033090 36.406 434 203 15 6 392 3 410 6.53e-67 218
MsG0580029360.01.T01 MTR_5g075370 38.480 408 191 14 13 384 4 387 7.46e-67 226
MsG0580029360.01.T01 MTR_6g090250 37.713 411 180 13 35 389 29 419 1.93e-65 214
MsG0580029360.01.T01 MTR_5g086590 47.500 240 117 5 140 376 5 238 9.91e-65 207
MsG0580029360.01.T01 MTR_8g013000 39.459 370 180 12 15 358 8 359 1.38e-64 212
MsG0580029360.01.T01 MTR_7g016930 40.056 357 164 10 14 355 13 334 8.84e-64 207
MsG0580029360.01.T01 MTR_4g014370 36.386 415 213 14 14 392 8 407 7.18e-63 207
MsG0580029360.01.T01 MTR_1g007430 39.828 349 155 14 28 352 7 324 1.59e-61 201
MsG0580029360.01.T01 MTR_8g064790 36.294 394 188 12 3 392 1 335 5.71e-61 200
MsG0580029360.01.T01 MTR_6g078010 41.160 362 155 14 54 389 1 330 1.31e-60 199
MsG0580029360.01.T01 MTR_8g036970 37.322 351 158 9 21 366 2 295 1.48e-60 200
MsG0580029360.01.T01 MTR_2g064950 36.908 401 196 12 15 385 8 381 2.05e-60 201
MsG0580029360.01.T01 MTR_5g074800 37.746 355 175 12 56 384 1 335 2.41e-59 196
MsG0580029360.01.T01 MTR_5g097850 43.369 279 99 7 126 392 12 243 3.43e-59 193
MsG0580029360.01.T01 MTR_5g092860 36.968 376 151 16 35 370 20 349 3.64e-59 196
MsG0580029360.01.T01 MTR_1g098180 34.988 403 184 13 13 391 15 363 9.03e-59 195
MsG0580029360.01.T01 MTR_5g043605 38.413 315 157 13 91 391 45 336 8.56e-57 190
MsG0580029360.01.T01 MTR_1g050308 34.663 401 173 14 3 392 23 345 2.16e-56 189
MsG0580029360.01.T01 MTR_5g097820 42.500 280 125 11 3 264 8 269 2.23e-56 186
MsG0580029360.01.T01 MTR_5g064700 37.209 387 172 16 56 392 1 366 7.30e-55 185
MsG0580029360.01.T01 MTR_6g079790 39.812 319 151 10 102 392 2 307 1.49e-53 180
MsG0580029360.01.T01 MTR_7g104710 39.339 333 130 11 1 308 1 286 2.43e-53 180
MsG0580029360.01.T01 MTR_8g063370 32.924 407 229 16 1 386 1 384 7.69e-53 181
MsG0580029360.01.T01 MTR_8g063330 37.602 367 171 18 13 349 10 348 1.77e-52 182
MsG0580029360.01.T01 MTR_8g033000 34.456 386 181 13 54 392 1 361 1.91e-51 176
MsG0580029360.01.T01 MTR_5g022850 33.666 401 180 13 15 392 14 351 4.71e-51 175
MsG0580029360.01.T01 MTR_5g068490 38.776 294 146 13 102 391 11 274 2.92e-50 171
MsG0580029360.01.T01 MTR_4g007940 33.520 358 193 10 56 391 5 339 3.20e-50 172
MsG0580029360.01.T01 MTR_1g050312 39.932 293 133 11 90 373 16 274 3.97e-50 171
MsG0580029360.01.T01 MTR_5g023970 49.462 186 86 5 214 392 10 194 1.83e-48 163
MsG0580029360.01.T01 MTR_6g090260 52.151 186 77 6 215 389 75 259 1.93e-48 165
MsG0580029360.01.T01 MTR_6g090260 41.176 119 52 3 6 123 9 110 4.87e-19 86.7
MsG0580029360.01.T01 MTR_7g023800 36.950 341 169 10 56 387 1 304 3.42e-48 166
MsG0580029360.01.T01 MTR_6g070880 39.764 254 104 8 14 238 29 262 9.47e-46 158
MsG0580029360.01.T01 MTR_6g071420 39.764 254 104 8 14 238 29 262 9.47e-46 158
MsG0580029360.01.T01 MTR_6g087620 39.274 303 127 11 90 372 1 266 1.44e-45 158
MsG0580029360.01.T01 MTR_5g097540 57.931 145 58 3 209 352 91 233 3.81e-45 158
MsG0580029360.01.T01 MTR_5g094350 36.721 305 116 10 15 281 11 276 1.39e-44 155
MsG0580029360.01.T01 MTR_6g004450 43.891 221 111 6 181 392 51 267 1.48e-44 155
MsG0580029360.01.T01 MTR_8g063350 32.754 403 187 18 1 385 1 337 7.24e-44 155
MsG0580029360.01.T01 MTR_5g076490 37.903 372 160 15 54 392 1 334 3.04e-43 154
MsG0580029360.01.T01 MTR_3g018750 39.076 238 116 5 179 390 3 237 3.15e-43 151
MsG0580029360.01.T01 MTR_2g021920 43.697 238 105 10 178 390 36 269 2.31e-42 149
MsG0580029360.01.T01 MTR_1g076810 40.000 270 130 12 6 262 8 258 4.51e-42 157
MsG0580029360.01.T01 MTR_5g098950 40.094 212 95 7 148 352 88 274 6.24e-40 143
MsG0580029360.01.T01 MTR_8g063310 29.136 405 221 15 14 386 19 389 7.25e-40 147
MsG0580029360.01.T01 MTR_6g465360 44.554 202 73 7 15 196 60 242 8.54e-39 140
MsG0580029360.01.T01 MTR_8g035690 36.803 269 134 7 159 394 38 303 3.28e-38 139
MsG0580029360.01.T01 MTR_5g037190 37.063 286 126 11 1 267 1 251 1.69e-37 136
MsG0580029360.01.T01 MTR_5g091150 41.395 215 81 7 102 301 2 186 2.11e-37 134
MsG0580029360.01.T01 MTR_5g066420 46.667 150 69 3 244 383 1 149 3.62e-35 127
MsG0580029360.01.T01 MTR_8g073570 39.674 184 94 5 9 190 2 170 5.70e-35 127
MsG0580029360.01.T01 MTR_2g104260 38.989 277 127 11 17 268 14 273 1.42e-34 129
MsG0580029360.01.T01 MTR_6g009350 42.328 189 94 7 181 357 10 195 2.87e-33 123
MsG0580029360.01.T01 MTR_7g019250 37.383 214 109 5 181 383 226 425 1.86e-32 127
MsG0580029360.01.T01 MTR_4g016000 38.384 198 107 7 153 344 2 190 6.01e-31 118
MsG0580029360.01.T01 MTR_1g115205 36.220 254 95 8 17 250 29 235 6.03e-31 119
MsG0580029360.01.T01 MTR_7g017150 41.837 196 104 6 205 392 72 265 4.12e-30 117
MsG0580029360.01.T01 MTR_5g096070 44.944 178 55 8 14 188 23 160 1.49e-29 112
MsG0580029360.01.T01 MTR_4g014370 36.181 199 115 4 202 392 141 335 1.53e-29 117
MsG0580029360.01.T01 MTR_4g014370 38.776 147 67 6 1 139 6 137 6.11e-17 81.6
MsG0580029360.01.T01 MTR_5g097650 42.857 168 65 5 3 165 8 149 2.08e-29 112
MsG0580029360.01.T01 MTR_6g079730 48.889 135 65 3 258 389 12 145 2.45e-29 111
MsG0580029360.01.T01 MTR_5g096050 58.491 106 28 2 244 333 1 106 5.47e-29 109
MsG0580029360.01.T01 MTR_7g017120 40.513 195 106 6 206 392 72 264 3.34e-28 112
MsG0580029360.01.T01 MTR_5g097660 50.943 106 52 0 288 393 14 119 4.79e-28 107
MsG0580029360.01.T01 MTR_1g047080 28.492 358 160 13 54 392 1 281 9.56e-27 108
MsG0580029360.01.T01 MTR_7g101200 33.333 222 108 10 150 356 40 236 2.46e-22 95.1
MsG0580029360.01.T01 MTR_2g028130 26.598 391 216 18 14 363 2 362 6.02e-22 97.1
MsG0580029360.01.T01 MTR_3g009310 26.393 341 206 11 3 331 22 329 2.70e-21 95.1
MsG0580029360.01.T01 MTR_1g097490 26.396 394 238 16 4 388 39 389 6.08e-21 94.0
MsG0580029360.01.T01 MTR_2g426070 26.316 380 227 17 12 364 1 354 7.44e-21 94.0
MsG0580029360.01.T01 MTR_8g041440 45.161 124 40 4 1 117 1 103 3.97e-20 85.5
MsG0580029360.01.T01 MTR_2g028140 27.949 390 211 22 14 363 2 361 6.23e-20 91.3
MsG0580029360.01.T01 MTR_3g047580 37.662 154 58 6 12 162 9 127 1.58e-19 84.3
MsG0580029360.01.T01 MTR_3g019290 31.278 227 94 7 6 221 3 178 2.11e-19 85.5
MsG0580029360.01.T01 MTR_3g030620 37.576 165 88 8 240 392 19 180 3.94e-19 84.7
MsG0580029360.01.T01 MTR_1g097560 24.808 391 245 14 5 388 24 372 5.72e-19 88.2
MsG0580029360.01.T01 MTR_2g022020 42.718 103 56 2 288 390 17 116 9.60e-19 81.6
MsG0580029360.01.T01 MTR_2g028110 26.519 362 219 14 17 363 4 333 1.27e-18 87.0
MsG0580029360.01.T01 MTR_4g061340 26.300 327 191 10 17 329 26 316 1.36e-18 87.0
MsG0580029360.01.T01 MTR_5g086780 43.689 103 54 2 271 370 127 228 1.07e-17 82.0
MsG0580029360.01.T01 MTR_5g086780 39.000 100 48 3 15 104 14 110 8.04e-11 62.0
MsG0580029360.01.T01 MTR_5g057790 27.439 328 179 17 17 328 46 330 1.82e-17 84.0
MsG0580029360.01.T01 MTR_3g011060 27.557 352 224 13 17 362 28 354 2.11e-17 83.6
MsG0580029360.01.T01 MTR_5g057710 26.126 333 177 15 17 328 46 330 2.23e-17 83.6
MsG0580029360.01.T01 MTR_1g097330 25.128 390 243 13 17 393 16 369 6.17e-17 82.4
MsG0580029360.01.T01 MTR_5g049560 34.437 151 87 4 54 195 1 148 6.44e-17 80.5
MsG0580029360.01.T01 MTR_5g036250 51.807 83 38 2 304 386 23 103 1.05e-16 78.2
MsG0580029360.01.T01 MTR_3g009260 28.349 321 174 17 20 329 44 319 2.49e-16 80.5
MsG0580029360.01.T01 MTR_1g068860 26.133 375 204 18 17 363 4 333 2.68e-16 80.1
MsG0580029360.01.T01 MTR_1g050305 52.941 85 34 3 294 373 21 104 3.01e-16 75.5
MsG0580029360.01.T01 MTR_4g107820 24.810 395 228 17 17 388 36 384 3.10e-16 80.1
MsG0580029360.01.T01 MTR_4g107780 24.810 395 228 17 17 388 36 384 3.10e-16 80.1
MsG0580029360.01.T01 MTR_4g107780 24.810 395 228 17 17 388 36 384 4.32e-16 79.7
MsG0580029360.01.T01 MTR_4g094400 43.119 109 43 3 237 326 3 111 4.40e-16 74.7
MsG0580029360.01.T01 MTR_4g107820 24.810 395 228 17 17 388 36 384 4.48e-16 79.7
MsG0580029360.01.T01 MTR_2g426060 26.829 369 222 18 17 361 6 350 4.86e-16 79.7
MsG0580029360.01.T01 MTR_4g133170 27.027 370 203 20 17 363 4 329 4.95e-16 79.3
MsG0580029360.01.T01 MTR_2g031720 25.995 377 216 18 12 363 1 339 5.65e-16 79.3
MsG0580029360.01.T01 MTR_2g426090 25.269 372 222 18 20 364 9 351 6.04e-16 79.3
MsG0580029360.01.T01 MTR_3g036430 26.343 391 216 17 6 388 9 335 6.36e-16 78.6
MsG0580029360.01.T01 MTR_0667s0010 24.675 385 225 17 12 363 1 353 6.52e-16 79.3
MsG0580029360.01.T01 MTR_3g013740 28.235 340 187 15 11 328 38 342 1.01e-15 78.6
MsG0580029360.01.T01 MTR_4g055060 25.587 383 232 16 17 381 30 377 1.15e-15 78.2
MsG0580029360.01.T01 MTR_3g014570 26.562 320 196 13 17 329 29 316 1.18e-15 78.2
MsG0580029360.01.T01 MTR_3g024110 26.498 317 188 13 17 328 101 377 1.30e-15 78.6
MsG0580029360.01.T01 MTR_1g068835 25.135 370 212 18 17 363 4 331 1.61e-15 77.8
MsG0580029360.01.T01 MTR_4g019990 23.032 343 213 11 12 329 1 317 1.76e-15 77.8
MsG0580029360.01.T01 MTR_4g116330 24.745 392 248 16 13 392 19 375 2.33e-15 77.4
MsG0580029360.01.T01 MTR_3g006670 26.586 331 191 14 17 333 49 341 2.39e-15 77.4
MsG0580029360.01.T01 MTR_2g426020 25.378 331 205 15 12 326 1 305 3.68e-15 77.0
MsG0580029360.01.T01 MTR_3g014540 26.380 326 187 15 17 328 29 315 3.78e-15 76.6
MsG0580029360.01.T01 MTR_2g028160 24.859 354 209 17 14 339 2 326 5.95e-15 76.3
MsG0580029360.01.T01 MTR_7g070440 25.323 387 225 15 14 374 4 352 7.27e-15 75.9
MsG0580029360.01.T01 MTR_3g013770 24.557 395 238 16 17 387 33 391 8.63e-15 75.9
MsG0580029360.01.T01 MTR_4g122850 25.000 376 228 16 28 381 12 355 9.42e-15 75.5
MsG0580029360.01.T01 MTR_6g048140 23.138 376 226 13 17 366 39 377 1.64e-14 75.1
MsG0580029360.01.T01 MTR_6g087660 40.000 120 59 3 4 114 5 120 2.14e-14 71.6
MsG0580029360.01.T01 MTR_2g031680 25.263 380 208 18 12 363 1 332 2.16e-14 74.3
MsG0580029360.01.T01 MTR_3g047540 51.562 64 30 1 214 276 5 68 2.27e-14 68.6
MsG0580029360.01.T01 MTR_3g009250 31.905 210 107 11 20 228 44 218 2.97e-14 72.4
MsG0580029360.01.T01 MTR_4g070550 24.808 391 219 19 14 364 2 357 4.03e-14 73.9
MsG0580029360.01.T01 MTR_1g009110 24.796 367 224 16 20 362 17 355 4.15e-14 73.6
MsG0580029360.01.T01 MTR_2g021050 24.631 406 221 21 17 389 5 358 6.64e-14 73.2
MsG0580029360.01.T01 MTR_7g407070 26.075 372 238 13 17 370 32 384 7.77e-14 72.8
MsG0580029360.01.T01 MTR_2g029990 27.129 317 195 16 18 328 52 338 1.26e-13 72.4
MsG0580029360.01.T01 MTR_3g007360 28.267 329 173 17 20 329 55 339 1.39e-13 72.0
MsG0580029360.01.T01 MTR_5g070080 23.990 396 258 16 16 392 9 380 1.59e-13 72.0
MsG0580029360.01.T01 MTR_2g078900 24.233 326 206 11 8 328 24 313 1.59e-13 71.6
MsG0580029360.01.T01 MTR_1g068875 26.558 369 207 20 17 363 4 330 1.83e-13 71.6
MsG0580029360.01.T01 MTR_7g013590 25.857 321 191 13 20 328 39 324 1.88e-13 71.6
MsG0580029360.01.T01 MTR_7g055930 24.654 361 218 11 19 342 15 358 2.34e-13 71.6
MsG0580029360.01.T01 MTR_7g066000 24.490 343 197 15 16 329 24 333 2.52e-13 71.2
MsG0580029360.01.T01 MTR_6g053260 25.401 374 221 16 17 366 337 676 2.53e-13 72.0
MsG0580029360.01.T01 MTR_3g072470 24.176 364 203 16 14 340 16 343 2.74e-13 71.2
MsG0580029360.01.T01 MTR_3g083640 24.768 323 189 15 17 328 55 334 3.17e-13 71.2
MsG0580029360.01.T01 MTR_3g007410 25.455 330 181 15 20 329 55 339 3.50e-13 70.9
MsG0580029360.01.T01 MTR_1g015730 24.069 349 188 15 12 329 4 306 3.87e-13 70.9
MsG0580029360.01.T01 MTR_7g056710 24.363 353 197 15 3 329 4 312 4.48e-13 70.5
MsG0580029360.01.T01 MTR_3g030250 24.235 392 231 18 8 380 28 372 4.77e-13 70.5
MsG0580029360.01.T01 MTR_5g070130 21.197 401 263 14 9 390 3 369 5.99e-13 70.1
MsG0580029360.01.T01 MTR_3g058480 27.178 287 174 10 17 293 39 300 6.70e-13 69.7
MsG0580029360.01.T01 MTR_3g030330 23.919 393 236 16 17 388 20 370 6.97e-13 69.7
MsG0580029360.01.T01 MTR_3g103020 22.251 391 254 15 16 392 19 373 7.05e-13 69.7
MsG0580029360.01.T01 MTR_3g007300 24.036 337 194 10 17 350 49 326 8.05e-13 69.7
MsG0580029360.01.T01 MTR_3g030240 25.072 347 201 18 17 358 40 332 1.26e-12 68.9
MsG0580029360.01.T01 MTR_3g011650 28.095 210 116 8 20 228 82 257 1.34e-12 68.2
MsG0580029360.01.T01 MTR_4g030830 24.260 338 202 13 14 326 6 314 1.46e-12 68.9
MsG0580029360.01.T01 MTR_4g109280 25.466 322 190 11 16 328 7 287 1.62e-12 68.6
MsG0580029360.01.T01 MTR_4g116330 24.359 390 213 16 13 392 19 336 1.72e-12 68.6
MsG0580029360.01.T01 MTR_2g055970 27.077 325 191 13 14 328 208 496 1.87e-12 69.3
MsG0580029360.01.T01 MTR_4g117780 24.485 388 245 16 17 392 11 362 1.99e-12 68.6
MsG0580029360.01.T01 MTR_0115s0020 23.421 380 232 13 10 358 3 354 2.33e-12 68.6
MsG0580029360.01.T01 MTR_3g083010 25.439 342 199 15 17 328 6 321 2.50e-12 68.6
MsG0580029360.01.T01 MTR_3g006530 25.521 384 227 18 4 367 30 374 2.79e-12 68.2
MsG0580029360.01.T01 MTR_1g071010 26.721 247 152 8 11 252 9 231 3.57e-12 67.8
MsG0580029360.01.T01 MTR_7g062100 23.645 406 234 16 13 383 20 384 3.78e-12 67.8
MsG0580029360.01.T01 MTR_3g010520 25.203 369 214 15 8 364 16 334 3.83e-12 67.4
MsG0580029360.01.T01 MTR_2g026010 26.042 384 197 19 17 363 4 337 6.15e-12 67.0
MsG0580029360.01.T01 MTR_7g056820 23.848 369 228 12 11 355 1 340 7.06e-12 66.6
MsG0580029360.01.T01 MTR_3g006500 23.370 368 228 14 17 367 17 347 8.86e-12 66.6
MsG0580029360.01.T01 MTR_1g088120 24.267 375 218 13 9 348 2 345 9.51e-12 66.6
MsG0580029360.01.T01 MTR_8g467140 25.926 324 192 14 16 328 31 317 1.54e-11 65.5
MsG0580029360.01.T01 MTR_6g027910 22.663 353 226 13 20 358 12 331 1.69e-11 65.5
MsG0580029360.01.T01 MTR_7g077990 24.706 340 190 13 17 329 17 317 1.69e-11 65.9
MsG0580029360.01.T01 MTR_7g078860 23.446 354 212 15 13 337 5 328 1.77e-11 65.5
MsG0580029360.01.T01 MTR_3g010590 25.397 315 189 13 17 328 39 310 1.95e-11 65.5
MsG0580029360.01.T01 MTR_6g048120 23.360 381 245 15 6 366 22 375 2.18e-11 65.5
MsG0580029360.01.T01 MTR_5g046300 25.155 322 191 13 17 329 4 284 2.80e-11 64.7
MsG0580029360.01.T01 MTR_5g046290 25.155 322 191 13 17 329 4 284 2.80e-11 64.7
MsG0580029360.01.T01 MTR_4g117770 23.057 386 247 14 20 392 14 362 4.75e-11 64.3
MsG0580029360.01.T01 MTR_4g117810 23.057 386 247 14 20 392 14 362 4.75e-11 64.3
MsG0580029360.01.T01 MTR_5g094360 37.963 108 59 3 158 257 40 147 5.34e-11 60.8
MsG0580029360.01.T01 MTR_6g053240 23.181 371 236 12 17 365 28 371 6.88e-11 63.9
MsG0580029360.01.T01 MTR_7g056760 24.036 337 213 12 11 326 17 331 6.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029360.01.T01 AT3G16210 26.197 355 198 17 14 359 2 301 2.51e-15 77.0
MsG0580029360.01.T01 AT3G06240 24.870 386 235 15 17 370 36 398 3.85e-15 77.0
MsG0580029360.01.T01 AT4G12560 25.130 386 226 18 15 372 2 352 6.16e-13 70.1
MsG0580029360.01.T01 AT4G12560 25.130 386 226 18 15 372 2 352 6.16e-13 70.1
MsG0580029360.01.T01 AT4G12560 25.130 386 226 18 15 372 2 352 6.16e-13 70.1
MsG0580029360.01.T01 AT1G62270 26.667 285 145 13 9 268 2 247 4.08e-12 67.8

Find 88 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTTCATCTTAACTTATA+TGG 0.155455 5:+95960551 MsG0580029360.01.T01:CDS
TTGATATTCCTGACTCTTAT+AGG 0.161008 5:+95960352 MsG0580029360.01.T01:CDS
TTAAGTTGTGTTAGTGTTAA+TGG 0.216776 5:+95960045 MsG0580029360.01.T01:CDS
GCATGGTGATGTTTATAATT+TGG 0.226663 5:+95960097 MsG0580029360.01.T01:CDS
TTGGTAGAATGCTTTCTTTA+TGG 0.238341 5:-95960809 None:intergenic
AAGTCAAATGATACTAAATT+TGG 0.249284 5:-95960435 None:intergenic
AATCGCTTTAAAGATTTAAA+AGG 0.254965 5:-95959751 None:intergenic
TGGTTATGACCGTGTTAAAA+AGG 0.269775 5:+95960206 MsG0580029360.01.T01:CDS
TAAAGATTTAAAAGGAAGTT+TGG 0.270597 5:-95959743 None:intergenic
CATGAGAGCAAACATCTATT+TGG 0.273666 5:+95960186 MsG0580029360.01.T01:CDS
TCAGTCTTTGCAAATGGATT+TGG 0.301422 5:-95959982 None:intergenic
GCAAAAGACACTTGGTGATA+TGG 0.311009 5:+95960517 MsG0580029360.01.T01:CDS
TACGATTTATATTCTTTCTC+TGG 0.340532 5:+95959925 MsG0580029360.01.T01:CDS
AATTTGAAGATAATTTCTTT+TGG 0.344456 5:+95960286 MsG0580029360.01.T01:CDS
TCTTCCAAGAGTTACTTCTA+AGG 0.349340 5:-95960320 None:intergenic
GGTACTAAGACAAAGAAATT+TGG 0.355022 5:+95960771 MsG0580029360.01.T01:CDS
TCCCCTTCAGTCTTTGCAAA+TGG 0.359728 5:-95959988 None:intergenic
TCATGCCGTGAATAGTATTC+AGG 0.375285 5:-95960168 None:intergenic
TACATAGATGATAGTGTTAA+GGG 0.388025 5:+95960495 MsG0580029360.01.T01:CDS
TTACATAGATGATAGTGTTA+AGG 0.389891 5:+95960494 MsG0580029360.01.T01:CDS
AGAAAGGAGTCAAATTAGAT+TGG 0.394512 5:+95959959 MsG0580029360.01.T01:CDS
ATCATCTATGTAAGAGGGTA+TGG 0.395419 5:-95960484 None:intergenic
AAAGAAAGCATTCTACCAAT+TGG 0.398241 5:+95960813 MsG0580029360.01.T01:CDS
CTCCTTGTCTTACATGTAAG+AGG 0.404869 5:-95959870 None:intergenic
AACACTATCATCTATGTAAG+AGG 0.406095 5:-95960490 None:intergenic
ATCTTGAATTCGTAGGTAGT+TGG 0.427615 5:-95960123 None:intergenic
ACCGATCTTATCAAACATTC+CGG 0.447345 5:-95960751 None:intergenic
GCCTTGTTTGATTTAAGTAC+CGG 0.454335 5:+95960732 MsG0580029360.01.T01:CDS
CTTTGTATCCGTTCTTACTA+CGG 0.465890 5:+95960072 MsG0580029360.01.T01:CDS
TCTTGAATTCGTAGGTAGTT+GGG 0.470651 5:-95960122 None:intergenic
ATGAACCTGAATACTATTCA+CGG 0.476937 5:+95960163 MsG0580029360.01.T01:CDS
TCTGGAGAGAGATTTGAGAA+AGG 0.481023 5:+95959943 MsG0580029360.01.T01:CDS
AGACACTTGGTGATATGGAA+TGG 0.481357 5:+95960522 MsG0580029360.01.T01:CDS
GACACTTGGTGATATGGAAT+GGG 0.491862 5:+95960523 MsG0580029360.01.T01:CDS
ACCGACTGCAACAACTGTTC+TGG 0.492580 5:+95959675 MsG0580029360.01.T01:CDS
GGACCCTTATCTTACGAGCT+TGG 0.496958 5:+95960648 MsG0580029360.01.T01:CDS
ATATCCAAGCTCGTAAGATA+AGG 0.497948 5:-95960652 None:intergenic
ATAGCCTTAGAAGTAACTCT+TGG 0.499919 5:+95960316 MsG0580029360.01.T01:CDS
ATAGAGAAAACAATATCATC+AGG 0.504138 5:-95959715 None:intergenic
CCGCAACAATTTCTTATCAA+AGG 0.506263 5:+95959834 MsG0580029360.01.T01:CDS
AATAATTGTCATCAAACAAG+AGG 0.506802 5:-95959798 None:intergenic
GAAGGGGACCCACTACCATC+TGG 0.508924 5:+95960003 MsG0580029360.01.T01:CDS
TCATCGATCCTATAAGAGTC+AGG 0.509945 5:-95960360 None:intergenic
GTATTCAGGTTCATCAAAGC+TGG 0.513962 5:-95960154 None:intergenic
ACATGGATGGAGTGTCTCAT+TGG 0.526077 5:+95960391 MsG0580029360.01.T01:CDS
TATCCAAGCTCGTAAGATAA+GGG 0.532969 5:-95960651 None:intergenic
CTTGGATATCCTATCGGAGG+GGG 0.533351 5:+95960666 MsG0580029360.01.T01:CDS
AAGAATATAAATCGTACAAA+GGG 0.533763 5:-95959918 None:intergenic
TGGACTAAACTCTTCATTGT+CGG 0.534607 5:+95960627 MsG0580029360.01.T01:CDS
GTGTTATAATGCAAGATTCA+CGG 0.537561 5:-95960461 None:intergenic
ATCCATTTGCAAAGACTGAA+GGG 0.539561 5:+95959986 MsG0580029360.01.T01:CDS
GGATGGAGTGTCTCATTGGT+TGG 0.541892 5:+95960395 MsG0580029360.01.T01:CDS
AGCTTGGATATCCTATCGGA+GGG 0.542118 5:+95960664 MsG0580029360.01.T01:CDS
AATCCATTTGCAAAGACTGA+AGG 0.552763 5:+95959985 MsG0580029360.01.T01:CDS
GATCGATGAACAAGTGTACA+TGG 0.554805 5:+95960374 MsG0580029360.01.T01:CDS
GAACAAACACCAGATGGTAG+TGG 0.560730 5:-95960012 None:intergenic
GATGGAGTGTCTCATTGGTT+GGG 0.563105 5:+95960396 MsG0580029360.01.T01:CDS
GAAAGCATTCTACCAATTGG+AGG 0.565886 5:+95960816 MsG0580029360.01.T01:CDS
CGTAGTAAGAACGGATACAA+AGG 0.568264 5:-95960071 None:intergenic
ACCGGAATGTTTGATAAGAT+CGG 0.571870 5:+95960750 MsG0580029360.01.T01:CDS
TACGAGCTTGGATATCCTAT+CGG 0.577090 5:+95960660 MsG0580029360.01.T01:CDS
AAAGAATATAAATCGTACAA+AGG 0.579399 5:-95959919 None:intergenic
TCATCTATGTAAGAGGGTAT+GGG 0.585592 5:-95960483 None:intergenic
ACTAAGACAAAGAAATTTGG+TGG 0.587641 5:+95960774 MsG0580029360.01.T01:CDS
TGTTAAGGGCAAAAGACACT+TGG 0.597442 5:+95960509 MsG0580029360.01.T01:CDS
TTGGATATCCTATCGGAGGG+GGG 0.601228 5:+95960667 MsG0580029360.01.T01:CDS
GTAGTAAGAACGGATACAAA+GGG 0.602051 5:-95960070 None:intergenic
AACTTGGAATAAAAGAATCG+TGG 0.605926 5:+95960607 MsG0580029360.01.T01:CDS
CCGTTCTTACTACGGTGGCA+TGG 0.606356 5:+95960080 MsG0580029360.01.T01:CDS
AAAGCATTCTACCAATTGGA+GGG 0.607225 5:+95960817 MsG0580029360.01.T01:CDS
CTCCTCTTACATGTAAGACA+AGG 0.608260 5:+95959868 MsG0580029360.01.T01:CDS
AGGAATGATCTTGAATTCGT+AGG 0.608557 5:-95960130 None:intergenic
TTGAATGTGTGCGTAAATCA+TGG 0.610042 5:+95959773 MsG0580029360.01.T01:CDS
GATGAACAAGTGTACATGGA+TGG 0.610726 5:+95960378 MsG0580029360.01.T01:CDS
CCATGCCACCGTAGTAAGAA+CGG 0.615503 5:-95960080 None:intergenic
ACCAGAACAGTTGTTGCAGT+CGG 0.618260 5:-95959676 None:intergenic
TTAGAAGAACAAACACCAGA+TGG 0.618898 5:-95960018 None:intergenic
ATAATTGTCATCAAACAAGA+GGG 0.622232 5:-95959797 None:intergenic
TGGATATCCTATCGGAGGGG+GGG 0.626789 5:+95960668 MsG0580029360.01.T01:CDS
TGTATCCGTTCTTACTACGG+TGG 0.628043 5:+95960075 MsG0580029360.01.T01:CDS
ACACTATCATCTATGTAAGA+GGG 0.629413 5:-95960489 None:intergenic
TCAGGTTCATCAAAGCTGGA+AGG 0.633027 5:-95960150 None:intergenic
AACAAACACCAGATGGTAGT+GGG 0.635358 5:-95960011 None:intergenic
GAGCTTGGATATCCTATCGG+AGG 0.645285 5:+95960663 MsG0580029360.01.T01:CDS
TCCATTTGCAAAGACTGAAG+GGG 0.651629 5:+95959987 MsG0580029360.01.T01:CDS
TCCGGTACTTAAATCAAACA+AGG 0.657510 5:-95960733 None:intergenic
CCTTTGATAAGAAATTGTTG+CGG 0.660954 5:-95959834 None:intergenic
GCTTGGATATCCTATCGGAG+GGG 0.675209 5:+95960665 MsG0580029360.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGAAGATAATTTCTTT+TGG + Chr5:95960286-95960305 MsG0580029360.01.T01:CDS 15.0%
!!! ATATTTCACATTTCAATTTT+AGG + Chr5:95960582-95960601 MsG0580029360.01.T01:CDS 15.0%
!!! ATCAAAATTTTGTAGATTAT+CGG + Chr5:95959893-95959912 MsG0580029360.01.T01:CDS 15.0%
!!! ATTTGAAGATAATTTCTTTT+GGG + Chr5:95960287-95960306 MsG0580029360.01.T01:CDS 15.0%
!!! TATTTCACATTTCAATTTTA+GGG + Chr5:95960583-95960602 MsG0580029360.01.T01:CDS 15.0%
!! AAAGAATATAAATCGTACAA+AGG - Chr5:95959922-95959941 None:intergenic 20.0%
!! AAGAATATAAATCGTACAAA+GGG - Chr5:95959921-95959940 None:intergenic 20.0%
!! AAGTCAAATGATACTAAATT+TGG - Chr5:95960438-95960457 None:intergenic 20.0%
!! TAAAGATTTAAAAGGAAGTT+TGG - Chr5:95959746-95959765 None:intergenic 20.0%
!!! AATCGCTTTAAAGATTTAAA+AGG - Chr5:95959754-95959773 None:intergenic 20.0%
!!! ATTTCACATTTCAATTTTAG+GGG + Chr5:95960584-95960603 MsG0580029360.01.T01:CDS 20.0%
! AATAATTGTCATCAAACAAG+AGG - Chr5:95959801-95959820 None:intergenic 25.0%
! ATAATTGTCATCAAACAAGA+GGG - Chr5:95959800-95959819 None:intergenic 25.0%
! ATAGAGAAAACAATATCATC+AGG - Chr5:95959718-95959737 None:intergenic 25.0%
! TACGATTTATATTCTTTCTC+TGG + Chr5:95959925-95959944 MsG0580029360.01.T01:CDS 25.0%
! TGCTTTCATCTTAACTTATA+TGG + Chr5:95960551-95960570 MsG0580029360.01.T01:CDS 25.0%
! TGTTAAAAAGGACTATAAGT+TGG + Chr5:95960218-95960237 MsG0580029360.01.T01:CDS 25.0%
!! ACTTATAGTCCTTTTTAACA+CGG - Chr5:95960218-95960237 None:intergenic 25.0%
!! TACATAGATGATAGTGTTAA+GGG + Chr5:95960495-95960514 MsG0580029360.01.T01:CDS 25.0%
!! TTAAGTTGTGTTAGTGTTAA+TGG + Chr5:95960045-95960064 MsG0580029360.01.T01:CDS 25.0%
!! TTACATAGATGATAGTGTTA+AGG + Chr5:95960494-95960513 MsG0580029360.01.T01:CDS 25.0%
AACACTATCATCTATGTAAG+AGG - Chr5:95960493-95960512 None:intergenic 30.0%
AACTTGGAATAAAAGAATCG+TGG + Chr5:95960607-95960626 MsG0580029360.01.T01:CDS 30.0%
ACACTATCATCTATGTAAGA+GGG - Chr5:95960492-95960511 None:intergenic 30.0%
ACTAAGACAAAGAAATTTGG+TGG + Chr5:95960774-95960793 MsG0580029360.01.T01:CDS 30.0%
AGAAAGGAGTCAAATTAGAT+TGG + Chr5:95959959-95959978 MsG0580029360.01.T01:CDS 30.0%
ATGAACCTGAATACTATTCA+CGG + Chr5:95960163-95960182 MsG0580029360.01.T01:CDS 30.0%
CCTTTGATAAGAAATTGTTG+CGG - Chr5:95959837-95959856 None:intergenic 30.0%
GGTACTAAGACAAAGAAATT+TGG + Chr5:95960771-95960790 MsG0580029360.01.T01:CDS 30.0%
GTGTTATAATGCAAGATTCA+CGG - Chr5:95960464-95960483 None:intergenic 30.0%
TTGATATTCCTGACTCTTAT+AGG + Chr5:95960352-95960371 MsG0580029360.01.T01:CDS 30.0%
TTGGTAGAATGCTTTCTTTA+TGG - Chr5:95960812-95960831 None:intergenic 30.0%
! GCATGGTGATGTTTATAATT+TGG + Chr5:95960097-95960116 MsG0580029360.01.T01:CDS 30.0%
!! AAAGAAAGCATTCTACCAAT+TGG + Chr5:95960813-95960832 MsG0580029360.01.T01:CDS 30.0%
!! ATTTCAATTTTAGGGGAACT+TGG + Chr5:95960591-95960610 MsG0580029360.01.T01:CDS 30.0%
AATCCATTTGCAAAGACTGA+AGG + Chr5:95959985-95960004 MsG0580029360.01.T01:CDS 35.0%
ACCGATCTTATCAAACATTC+CGG - Chr5:95960754-95960773 None:intergenic 35.0%
ACCGGAATGTTTGATAAGAT+CGG + Chr5:95960750-95960769 MsG0580029360.01.T01:CDS 35.0%
AGGAATGATCTTGAATTCGT+AGG - Chr5:95960133-95960152 None:intergenic 35.0%
ATATCCAAGCTCGTAAGATA+AGG - Chr5:95960655-95960674 None:intergenic 35.0%
ATCATCTATGTAAGAGGGTA+TGG - Chr5:95960487-95960506 None:intergenic 35.0%
ATCCATTTGCAAAGACTGAA+GGG + Chr5:95959986-95960005 MsG0580029360.01.T01:CDS 35.0%
ATCTTGAATTCGTAGGTAGT+TGG - Chr5:95960126-95960145 None:intergenic 35.0%
CATGAGAGCAAACATCTATT+TGG + Chr5:95960186-95960205 MsG0580029360.01.T01:CDS 35.0%
CCGCAACAATTTCTTATCAA+AGG + Chr5:95959834-95959853 MsG0580029360.01.T01:CDS 35.0%
CTTTGTATCCGTTCTTACTA+CGG + Chr5:95960072-95960091 MsG0580029360.01.T01:CDS 35.0%
GTAGTAAGAACGGATACAAA+GGG - Chr5:95960073-95960092 None:intergenic 35.0%
TATCCAAGCTCGTAAGATAA+GGG - Chr5:95960654-95960673 None:intergenic 35.0%
TCCGGTACTTAAATCAAACA+AGG - Chr5:95960736-95960755 None:intergenic 35.0%
TCTTCCAAGAGTTACTTCTA+AGG - Chr5:95960323-95960342 None:intergenic 35.0%
TCTTGAATTCGTAGGTAGTT+GGG - Chr5:95960125-95960144 None:intergenic 35.0%
TGGACTAAACTCTTCATTGT+CGG + Chr5:95960627-95960646 MsG0580029360.01.T01:CDS 35.0%
TGGTTATGACCGTGTTAAAA+AGG + Chr5:95960206-95960225 MsG0580029360.01.T01:CDS 35.0%
TTAGAAGAACAAACACCAGA+TGG - Chr5:95960021-95960040 None:intergenic 35.0%
TTGAATGTGTGCGTAAATCA+TGG + Chr5:95959773-95959792 MsG0580029360.01.T01:CDS 35.0%
! AAAGCATTCTACCAATTGGA+GGG + Chr5:95960817-95960836 MsG0580029360.01.T01:CDS 35.0%
! ATAGCCTTAGAAGTAACTCT+TGG + Chr5:95960316-95960335 MsG0580029360.01.T01:CDS 35.0%
! TCAGTCTTTGCAAATGGATT+TGG - Chr5:95959985-95960004 None:intergenic 35.0%
! TCATCTATGTAAGAGGGTAT+GGG - Chr5:95960486-95960505 None:intergenic 35.0%
!! GCCTTGTTTGATTTAAGTAC+CGG + Chr5:95960732-95960751 MsG0580029360.01.T01:CDS 35.0%
AACAAACACCAGATGGTAGT+GGG - Chr5:95960014-95960033 None:intergenic 40.0%
CGTAGTAAGAACGGATACAA+AGG - Chr5:95960074-95960093 None:intergenic 40.0%
CTCCTCTTACATGTAAGACA+AGG + Chr5:95959868-95959887 MsG0580029360.01.T01:CDS 40.0%
CTCCTTGTCTTACATGTAAG+AGG - Chr5:95959873-95959892 None:intergenic 40.0%
GATCGATGAACAAGTGTACA+TGG + Chr5:95960374-95960393 MsG0580029360.01.T01:CDS 40.0%
GATGAACAAGTGTACATGGA+TGG + Chr5:95960378-95960397 MsG0580029360.01.T01:CDS 40.0%
TACGAGCTTGGATATCCTAT+CGG + Chr5:95960660-95960679 MsG0580029360.01.T01:CDS 40.0%
TCATCGATCCTATAAGAGTC+AGG - Chr5:95960363-95960382 None:intergenic 40.0%
TCATGCCGTGAATAGTATTC+AGG - Chr5:95960171-95960190 None:intergenic 40.0%
TCCATTTGCAAAGACTGAAG+GGG + Chr5:95959987-95960006 MsG0580029360.01.T01:CDS 40.0%
TCTGGAGAGAGATTTGAGAA+AGG + Chr5:95959943-95959962 MsG0580029360.01.T01:CDS 40.0%
TGTTAAGGGCAAAAGACACT+TGG + Chr5:95960509-95960528 MsG0580029360.01.T01:CDS 40.0%
! AGACACTTGGTGATATGGAA+TGG + Chr5:95960522-95960541 MsG0580029360.01.T01:CDS 40.0%
! GACACTTGGTGATATGGAAT+GGG + Chr5:95960523-95960542 MsG0580029360.01.T01:CDS 40.0%
! GCAAAAGACACTTGGTGATA+TGG + Chr5:95960517-95960536 MsG0580029360.01.T01:CDS 40.0%
! GTATTCAGGTTCATCAAAGC+TGG - Chr5:95960157-95960176 None:intergenic 40.0%
!! GAAAGCATTCTACCAATTGG+AGG + Chr5:95960816-95960835 MsG0580029360.01.T01:CDS 40.0%
ACCAGAACAGTTGTTGCAGT+CGG - Chr5:95959679-95959698 None:intergenic 45.0%
AGCTTGGATATCCTATCGGA+GGG + Chr5:95960664-95960683 MsG0580029360.01.T01:CDS 45.0%
GAACAAACACCAGATGGTAG+TGG - Chr5:95960015-95960034 None:intergenic 45.0%
TCAGGTTCATCAAAGCTGGA+AGG - Chr5:95960153-95960172 None:intergenic 45.0%
TCCCCTTCAGTCTTTGCAAA+TGG - Chr5:95959991-95960010 None:intergenic 45.0%
TGTATCCGTTCTTACTACGG+TGG + Chr5:95960075-95960094 MsG0580029360.01.T01:CDS 45.0%
! ACATGGATGGAGTGTCTCAT+TGG + Chr5:95960391-95960410 MsG0580029360.01.T01:CDS 45.0%
! GATGGAGTGTCTCATTGGTT+GGG + Chr5:95960396-95960415 MsG0580029360.01.T01:CDS 45.0%
ACCGACTGCAACAACTGTTC+TGG + Chr5:95959675-95959694 MsG0580029360.01.T01:CDS 50.0%
CCATGCCACCGTAGTAAGAA+CGG - Chr5:95960083-95960102 None:intergenic 50.0%
CTTGGATATCCTATCGGAGG+GGG + Chr5:95960666-95960685 MsG0580029360.01.T01:CDS 50.0%
GAGCTTGGATATCCTATCGG+AGG + Chr5:95960663-95960682 MsG0580029360.01.T01:CDS 50.0%
GCTTGGATATCCTATCGGAG+GGG + Chr5:95960665-95960684 MsG0580029360.01.T01:CDS 50.0%
GGACCCTTATCTTACGAGCT+TGG + Chr5:95960648-95960667 MsG0580029360.01.T01:CDS 50.0%
TTGGATATCCTATCGGAGGG+GGG + Chr5:95960667-95960686 MsG0580029360.01.T01:CDS 50.0%
! GGATGGAGTGTCTCATTGGT+TGG + Chr5:95960395-95960414 MsG0580029360.01.T01:CDS 50.0%
CCGTTCTTACTACGGTGGCA+TGG + Chr5:95960080-95960099 MsG0580029360.01.T01:CDS 55.0%
TGGATATCCTATCGGAGGGG+GGG + Chr5:95960668-95960687 MsG0580029360.01.T01:CDS 55.0%
GAAGGGGACCCACTACCATC+TGG + Chr5:95960003-95960022 MsG0580029360.01.T01:CDS 60.0%
TCGTCGTCGTCGTCGTCATG+TGG - Chr5:95960264-95960283 None:intergenic 60.0%
CCTATCGGAGGGGGGGAGAA+AGG + Chr5:95960675-95960694 MsG0580029360.01.T01:CDS 65.0%
CCTTTCTCCCCCCCTCCGAT+AGG - Chr5:95960678-95960697 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 95959664 95960848 95959664 ID=MsG0580029360.01;Name=MsG0580029360.01
Chr5 mRNA 95959664 95960848 95959664 ID=MsG0580029360.01.T01;Parent=MsG0580029360.01;Name=MsG0580029360.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|394
Chr5 exon 95959664 95960848 95959664 ID=MsG0580029360.01.T01:exon:36024;Parent=MsG0580029360.01.T01
Chr5 CDS 95959664 95960848 95959664 ID=MsG0580029360.01.T01:cds;Parent=MsG0580029360.01.T01
Gene Sequence

>MsG0580029360.01.T01

ATGGAGATATCACCGACTGCAACAACTGTTCTGGTTAGCAGCAGTTATGTGCCTGATGATATTGTTTTCTCTATTCTCTCCAAACTTCCTTTTAAATCTTTAAAGCGATTTGAATGTGTGCGTAAATCATGGTCCCTCTTGTTTGATGACAATTATTTTATGAATATGTACCGCAACAATTTCTTATCAAAGGATCATACATCTCTCCTCTTACATGTAAGACAAGGAGATCAAAATTTTGTAGATTATCGGTACCCTTTGTACGATTTATATTCTTTCTCTGGAGAGAGATTTGAGAAAGGAGTCAAATTAGATTGGCCAAATCCATTTGCAAAGACTGAAGGGGACCCACTACCATCTGGTGTTTGTTCTTCTAAATTGTTAAGTTGTGTTAGTGTTAATGGCACCCTTTGTATCCGTTCTTACTACGGTGGCATGGTGATGTTTATAATTTGGAACCCAACTACCTACGAATTCAAGATCATTCCTTCCAGCTTTGATGAACCTGAATACTATTCACGGCATGAGAGCAAACATCTATTTGGTTATGACCGTGTTAAAAAGGACTATAAGTTGGTTCAGTTTGTAGATGAAACACCACATGACGACGACGACGACGAAGAATTTGAAGATAATTTCTTTTGGGAGATATATAGCCTTAGAAGTAACTCTTGGAAGAAATTAGACATTGATATTCCTGACTCTTATAGGATCGATGAACAAGTGTACATGGATGGAGTGTCTCATTGGTTGGGTAAAAGTAGAAAACATCCAAATTTAGTATCATTTGACTTCAGCCGTGAATCTTGCATTATAACACCCATACCCTCTTACATAGATGATAGTGTTAAGGGCAAAAGACACTTGGTGATATGGAATGGGTCTATTGCTTTCATCTTAACTTATATGGAGACATCTATATTTCACATTTCAATTTTAGGGGAACTTGGAATAAAAGAATCGTGGACTAAACTCTTCATTGTCGGACCCTTATCTTACGAGCTTGGATATCCTATCGGAGGGGGGGAGAAAGGCAAGATATTATTTAGAAGAAAAAACGATAAACTAGCCTTGTTTGATTTAAGTACCGGAATGTTTGATAAGATCGGTACTAAGACAAAGAAATTTGGTGGTAACATACTATTCCATAAAGAAAGCATTCTACCAATTGGAGGGAAAATATGA
Protein sequence

>MsG0580029360.01.T01

MEISPTATTVLVSSSYVPDDIVFSILSKLPFKSLKRFECVRKSWSLLFDDNYFMNMYRNNFLSKDHTSLLLHVRQGDQNFVDYRYPLYDLYSFSGERFEKGVKLDWPNPFAKTEGDPLPSGVCSSKLLSCVSVNGTLCIRSYYGGMVMFIIWNPTTYEFKIIPSSFDEPEYYSRHESKHLFGYDRVKKDYKLVQFVDETPHDDDDDEEFEDNFFWEIYSLRSNSWKKLDIDIPDSYRIDEQVYMDGVSHWLGKSRKHPNLVSFDFSRESCIITPIPSYIDDSVKGKRHLVIWNGSIAFILTYMETSIFHISILGELGIKESWTKLFIVGPLSYELGYPIGGGEKGKILFRRKNDKLALFDLSTGMFDKIGTKTKKFGGNILFHKESILPIGGKI*