AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000831.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000831.01.T01 MTR_1g007450 60.743 377 136 3 1 367 1 375 1.34e-146 421
MsG0180000831.01.T01 MTR_1g007430 59.327 327 110 2 23 340 7 319 1.32e-122 357
MsG0180000831.01.T01 MTR_0129s0070 52.151 372 163 5 6 368 11 376 2.84e-117 346
MsG0180000831.01.T01 MTR_0129s0120 51.596 376 167 5 2 368 7 376 1.85e-115 341
MsG0180000831.01.T01 MTR_8g063440 47.368 380 175 10 1 370 1 365 8.62e-108 321
MsG0180000831.01.T01 MTR_8g464770 48.031 381 168 12 1 370 1 362 6.66e-103 308
MsG0180000831.01.T01 MTR_2g022000 47.570 391 172 11 7 368 11 397 3.51e-101 306
MsG0180000831.01.T01 MTR_5g097330 46.512 387 179 11 1 368 5 382 1.76e-100 303
MsG0180000831.01.T01 MTR_4g102410 45.312 384 195 6 1 370 50 432 2.34e-99 302
MsG0180000831.01.T01 MTR_0129s0050 47.074 393 174 8 2 368 4 388 8.24e-99 299
MsG0180000831.01.T01 MTR_2g021800 45.685 394 176 13 7 368 11 398 1.80e-96 293
MsG0180000831.01.T01 MTR_7g069550 44.648 383 175 12 2 360 4 373 2.71e-96 292
MsG0180000831.01.T01 MTR_4g028510 47.123 365 170 11 12 359 16 374 6.51e-96 293
MsG0180000831.01.T01 MTR_8g012090 48.370 368 140 11 1 356 5 334 1.06e-94 286
MsG0180000831.01.T01 MTR_4g028660 44.920 374 185 10 1 359 4 371 3.50e-94 287
MsG0180000831.01.T01 MTR_4g027450 44.920 374 185 10 1 359 4 371 3.50e-94 287
MsG0180000831.01.T01 MTR_1g007410 45.526 380 176 11 1 360 11 379 1.32e-93 286
MsG0180000831.01.T01 MTR_3g011120 44.063 379 182 13 2 370 4 362 2.84e-93 284
MsG0180000831.01.T01 MTR_6g086825 46.133 375 169 11 10 360 68 433 4.64e-93 286
MsG0180000831.01.T01 MTR_4g117550 44.211 380 164 11 3 368 8 353 4.69e-93 283
MsG0180000831.01.T01 MTR_0054s0100 46.094 384 173 12 2 360 7 381 5.26e-93 284
MsG0180000831.01.T01 MTR_5g097350 45.767 378 173 12 4 367 8 367 6.09e-93 283
MsG0180000831.01.T01 MTR_2g066170 44.180 378 193 11 1 370 1 368 1.14e-92 283
MsG0180000831.01.T01 MTR_6g079770 44.961 387 178 10 4 360 9 390 2.62e-91 280
MsG0180000831.01.T01 MTR_6g090180 45.000 380 183 10 2 360 37 411 5.47e-91 280
MsG0180000831.01.T01 MTR_7g017130 45.822 371 183 9 1 360 7 370 5.83e-91 279
MsG0180000831.01.T01 MTR_7g017170 45.822 371 183 9 1 360 7 370 6.44e-91 279
MsG0180000831.01.T01 MTR_6g079810 45.524 391 181 12 2 367 59 442 9.04e-91 280
MsG0180000831.01.T01 MTR_6g080680 45.213 376 173 10 2 360 9 368 1.17e-90 278
MsG0180000831.01.T01 MTR_0054s0090 45.833 384 172 13 2 360 7 379 2.59e-90 277
MsG0180000831.01.T01 MTR_4g028680 45.187 374 185 10 1 359 4 372 4.51e-90 276
MsG0180000831.01.T01 MTR_4g130330 45.753 365 176 9 11 360 6 363 6.88e-90 276
MsG0180000831.01.T01 MTR_8g467670 43.802 363 183 11 11 368 13 359 2.72e-89 274
MsG0180000831.01.T01 MTR_0134s0060 44.103 390 183 12 1 360 1 385 4.86e-89 274
MsG0180000831.01.T01 MTR_2g021770 43.523 386 178 12 5 360 5 380 5.98e-89 274
MsG0180000831.01.T01 MTR_7g017040 45.845 373 175 12 5 360 9 371 7.94e-89 273
MsG0180000831.01.T01 MTR_5g097220 43.392 401 176 14 7 373 8 391 1.49e-88 273
MsG0180000831.01.T01 MTR_2g021950 43.536 379 197 11 1 367 5 378 2.33e-88 272
MsG0180000831.01.T01 MTR_2g066200 43.360 369 192 10 1 360 1 361 4.40e-88 271
MsG0180000831.01.T01 MTR_2g065860 42.473 372 191 10 1 360 1 361 5.69e-87 268
MsG0180000831.01.T01 MTR_2g038680 42.963 405 179 15 1 370 5 392 1.17e-86 268
MsG0180000831.01.T01 MTR_2g064950 43.077 390 181 11 3 369 1 372 1.19e-86 268
MsG0180000831.01.T01 MTR_2g065840 42.969 384 190 12 1 370 1 369 7.03e-86 265
MsG0180000831.01.T01 MTR_4g055820 44.262 366 170 10 2 343 4 359 1.23e-85 264
MsG0180000831.01.T01 MTR_6g461660 43.814 388 184 11 1 368 8 381 4.31e-85 264
MsG0180000831.01.T01 MTR_4g028750 42.400 375 192 10 1 359 4 370 5.42e-85 263
MsG0180000831.01.T01 MTR_4g014370 43.077 390 184 10 1 360 1 382 6.05e-85 264
MsG0180000831.01.T01 MTR_8g039500 43.902 369 171 10 1 356 1 346 1.11e-84 261
MsG0180000831.01.T01 MTR_2g034700 46.467 368 157 14 6 359 7 348 1.66e-84 261
MsG0180000831.01.T01 MTR_5g096630 41.688 391 206 7 1 370 7 396 7.25e-84 261
MsG0180000831.01.T01 MTR_2g104340 43.299 388 189 11 2 370 4 379 2.45e-83 259
MsG0180000831.01.T01 MTR_5g037680 43.005 386 178 14 7 370 3 368 2.52e-83 261
MsG0180000831.01.T01 MTR_8g041270 42.711 391 188 12 6 370 9 389 4.27e-83 259
MsG0180000831.01.T01 MTR_2g066150 42.667 375 177 12 1 370 1 342 1.18e-81 254
MsG0180000831.01.T01 MTR_5g092850 41.645 377 173 14 11 359 15 372 5.44e-81 253
MsG0180000831.01.T01 MTR_2g104280 42.051 390 179 14 3 360 5 379 8.05e-81 253
MsG0180000831.01.T01 MTR_7g079640 45.576 373 162 16 2 360 4 349 2.34e-79 248
MsG0180000831.01.T01 MTR_5g059430 41.772 395 191 12 4 365 15 403 2.49e-79 250
MsG0180000831.01.T01 MTR_0831s0010 41.623 382 184 14 2 365 38 398 2.78e-79 249
MsG0180000831.01.T01 MTR_5g091140 42.119 387 177 12 1 367 37 396 1.49e-78 248
MsG0180000831.01.T01 MTR_8g013000 43.370 362 171 13 3 342 1 350 2.78e-78 246
MsG0180000831.01.T01 MTR_5g069390 41.131 389 196 12 4 366 15 396 1.41e-77 248
MsG0180000831.01.T01 MTR_1g053510 40.153 391 183 13 2 358 4 377 1.05e-76 243
MsG0180000831.01.T01 MTR_5g024260 42.895 373 178 18 10 360 20 379 3.78e-76 241
MsG0180000831.01.T01 MTR_6g478230 41.711 374 177 10 10 360 25 380 7.56e-76 241
MsG0180000831.01.T01 MTR_7g111700 42.480 379 151 13 10 367 13 345 1.21e-75 238
MsG0180000831.01.T01 MTR_5g072060 43.700 373 157 11 10 360 4 345 3.85e-75 244
MsG0180000831.01.T01 MTR_4g007940 41.441 333 162 10 61 371 4 325 9.74e-75 235
MsG0180000831.01.T01 MTR_5g097680 41.013 395 192 12 5 360 10 402 1.43e-74 238
MsG0180000831.01.T01 MTR_8g064890 40.214 373 198 9 1 360 1 361 9.13e-74 234
MsG0180000831.01.T01 MTR_8g063330 41.504 359 182 10 1 342 1 348 2.45e-73 236
MsG0180000831.01.T01 MTR_5g043605 39.024 369 152 12 8 370 21 322 8.60e-73 231
MsG0180000831.01.T01 MTR_5g096910 39.840 374 193 12 2 359 7 364 9.18e-73 232
MsG0180000831.01.T01 MTR_7g016930 45.312 320 145 7 5 318 9 304 1.24e-72 229
MsG0180000831.01.T01 MTR_8g046310 39.791 382 193 14 2 370 3 360 2.01e-71 228
MsG0180000831.01.T01 MTR_8g046200 38.061 423 187 17 2 370 3 404 3.95e-71 228
MsG0180000831.01.T01 MTR_8g033140 36.591 399 195 11 10 368 17 397 3.68e-70 226
MsG0180000831.01.T01 MTR_8g033090 38.560 389 184 13 11 360 13 385 1.81e-68 221
MsG0180000831.01.T01 MTR_5g074800 43.750 320 149 10 60 360 11 318 3.40e-68 218
MsG0180000831.01.T01 MTR_8g036970 37.845 362 157 9 16 368 2 304 7.44e-68 218
MsG0180000831.01.T01 MTR_6g078010 40.828 338 167 11 50 373 2 320 8.81e-68 218
MsG0180000831.01.T01 MTR_5g074850 39.340 394 181 17 2 359 25 396 1.40e-67 229
MsG0180000831.01.T01 MTR_1g098180 39.257 377 170 13 2 360 4 339 6.74e-67 216
MsG0180000831.01.T01 MTR_8g033110 38.155 401 194 15 1 360 1 388 9.88e-67 217
MsG0180000831.01.T01 MTR_6g090250 39.785 372 176 11 32 360 31 397 1.56e-66 216
MsG0180000831.01.T01 MTR_5g075370 38.462 390 175 17 11 359 7 372 7.38e-66 223
MsG0180000831.01.T01 MTR_8g046220 36.788 386 188 9 10 360 15 379 2.11e-65 213
MsG0180000831.01.T01 MTR_1g050308 37.330 367 157 10 1 360 23 323 4.30e-65 211
MsG0180000831.01.T01 MTR_5g092860 37.838 370 160 13 24 360 14 346 1.42e-64 210
MsG0180000831.01.T01 MTR_5g086590 46.091 243 111 6 131 370 13 238 1.79e-64 205
MsG0180000831.01.T01 MTR_8g032980 36.842 399 186 14 10 360 14 394 2.73e-63 208
MsG0180000831.01.T01 MTR_8g063370 36.585 369 204 13 3 360 15 364 5.05e-62 204
MsG0180000831.01.T01 MTR_8g018110 37.659 393 189 17 1 360 1 370 5.09e-61 201
MsG0180000831.01.T01 MTR_5g096900 41.212 330 157 10 1 310 1 313 6.78e-61 199
MsG0180000831.01.T01 MTR_5g068490 43.657 268 126 9 93 360 9 251 1.57e-60 196
MsG0180000831.01.T01 MTR_8g063310 36.022 372 208 10 4 360 14 370 2.35e-60 200
MsG0180000831.01.T01 MTR_8g064790 37.151 358 168 7 5 360 8 310 7.69e-60 197
MsG0180000831.01.T01 MTR_5g022850 37.405 393 162 13 1 370 5 336 4.45e-59 195
MsG0180000831.01.T01 MTR_6g079790 42.456 285 141 8 95 360 2 282 5.95e-59 193
MsG0180000831.01.T01 MTR_8g063350 33.884 363 170 12 11 360 13 318 4.70e-57 189
MsG0180000831.01.T01 MTR_2g021920 44.094 254 113 7 139 367 5 254 1.93e-55 183
MsG0180000831.01.T01 MTR_5g064700 40.346 347 164 16 59 368 10 350 4.79e-54 182
MsG0180000831.01.T01 MTR_1g050312 41.176 289 129 11 80 360 13 268 8.54e-54 179
MsG0180000831.01.T01 MTR_7g104710 39.677 310 144 8 4 302 9 286 2.43e-52 177
MsG0180000831.01.T01 MTR_6g087620 40.636 283 129 8 88 359 6 260 5.05e-52 174
MsG0180000831.01.T01 MTR_4g014370 36.066 366 161 10 1 360 12 310 1.98e-50 172
MsG0180000831.01.T01 MTR_5g097820 40.977 266 132 12 5 255 14 269 3.11e-50 169
MsG0180000831.01.T01 MTR_5g037190 43.123 269 118 11 1 257 5 250 6.10e-50 168
MsG0180000831.01.T01 MTR_5g023970 54.651 172 73 4 197 368 9 175 1.10e-49 166
MsG0180000831.01.T01 MTR_7g023800 39.228 311 138 9 61 360 14 284 1.96e-49 169
MsG0180000831.01.T01 MTR_6g070880 43.750 240 101 10 7 219 27 259 1.01e-48 166
MsG0180000831.01.T01 MTR_6g071420 43.750 240 101 10 7 219 27 259 1.01e-48 166
MsG0180000831.01.T01 MTR_1g076810 44.595 222 115 6 4 219 10 229 2.60e-48 173
MsG0180000831.01.T01 MTR_6g004450 47.087 206 88 6 164 360 49 242 1.77e-46 160
MsG0180000831.01.T01 MTR_3g018750 44.651 215 94 5 164 359 3 211 6.66e-45 155
MsG0180000831.01.T01 MTR_6g090260 45.361 194 92 4 188 370 54 244 2.39e-44 154
MsG0180000831.01.T01 MTR_6g009350 46.114 193 91 5 165 350 9 195 3.07e-43 149
MsG0180000831.01.T01 MTR_5g098950 43.925 214 84 4 133 342 90 271 3.21e-43 151
MsG0180000831.01.T01 MTR_8g073570 47.159 176 86 5 1 175 1 170 3.48e-43 148
MsG0180000831.01.T01 MTR_5g076490 37.690 329 160 12 55 360 2 308 1.05e-42 152
MsG0180000831.01.T01 MTR_4g016000 41.546 207 96 9 136 336 2 189 3.27e-41 144
MsG0180000831.01.T01 MTR_2g104260 38.652 282 141 10 2 261 4 275 6.71e-41 145
MsG0180000831.01.T01 MTR_7g019250 38.697 261 122 8 123 371 185 419 2.43e-39 146
MsG0180000831.01.T01 MTR_5g094350 35.294 289 142 10 8 272 9 276 3.80e-39 141
MsG0180000831.01.T01 MTR_8g033000 32.622 328 169 14 83 369 28 344 4.65e-39 143
MsG0180000831.01.T01 MTR_5g097850 34.328 268 112 7 104 360 5 219 4.78e-39 140
MsG0180000831.01.T01 MTR_6g465360 41.048 229 113 11 1 215 51 271 1.94e-37 137
MsG0180000831.01.T01 MTR_1g115205 36.719 256 96 10 4 238 25 235 2.80e-34 127
MsG0180000831.01.T01 MTR_7g017120 42.938 177 94 4 192 367 74 244 2.02e-29 114
MsG0180000831.01.T01 MTR_7g017150 42.938 177 94 4 192 367 75 245 3.66e-29 114
MsG0180000831.01.T01 MTR_7g101200 36.937 222 103 10 130 344 37 228 1.75e-28 111
MsG0180000831.01.T01 MTR_8g035690 36.820 239 105 7 156 360 50 276 1.88e-28 113
MsG0180000831.01.T01 MTR_5g096920 48.800 125 58 3 233 356 2 121 6.41e-27 104
MsG0180000831.01.T01 MTR_5g066420 46.154 143 70 4 233 370 2 142 1.02e-26 104
MsG0180000831.01.T01 MTR_4g116330 29.700 367 215 15 6 362 17 350 1.69e-26 109
MsG0180000831.01.T01 MTR_6g079730 50.000 110 55 0 251 360 14 123 2.93e-26 102
MsG0180000831.01.T01 MTR_2g021150 28.841 371 219 17 11 364 13 355 4.44e-26 107
MsG0180000831.01.T01 MTR_3g019290 33.803 213 98 8 1 205 1 178 1.33e-25 102
MsG0180000831.01.T01 MTR_5g097650 42.177 147 72 5 10 154 20 155 2.12e-25 100
MsG0180000831.01.T01 MTR_5g097540 42.759 145 73 4 198 342 96 230 2.95e-25 104
MsG0180000831.01.T01 MTR_4g023080 26.781 351 220 8 6 353 3 319 3.42e-25 105
MsG0180000831.01.T01 MTR_3g014540 28.329 353 217 13 12 359 29 350 6.20e-25 104
MsG0180000831.01.T01 MTR_3g030620 43.796 137 72 2 228 360 19 154 7.20e-25 100
MsG0180000831.01.T01 MTR_4g021785 27.089 347 215 9 11 353 8 320 8.53e-25 103
MsG0180000831.01.T01 MTR_3g047580 38.255 149 66 4 1 145 1 127 1.55e-24 97.8
MsG0180000831.01.T01 MTR_5g091150 34.746 236 94 9 95 308 2 199 2.12e-24 99.8
MsG0180000831.01.T01 MTR_4g133170 26.330 376 221 19 12 369 4 341 2.09e-23 100
MsG0180000831.01.T01 MTR_3g013740 27.344 384 216 18 7 360 39 389 3.24e-23 100
MsG0180000831.01.T01 MTR_5g086780 45.614 114 62 0 246 359 111 224 6.75e-23 96.3
MsG0180000831.01.T01 MTR_5g086780 62.000 50 19 0 3 52 7 56 1.71e-12 67.0
MsG0180000831.01.T01 MTR_3g007410 28.213 319 183 14 15 322 55 338 9.23e-23 99.0
MsG0180000831.01.T01 MTR_5g057790 29.321 324 177 12 12 322 46 330 1.22e-22 98.6
MsG0180000831.01.T01 MTR_5g096070 36.842 171 73 6 6 172 20 159 5.22e-22 91.7
MsG0180000831.01.T01 MTR_1g097560 29.096 354 208 19 12 359 36 352 1.22e-21 95.5
MsG0180000831.01.T01 MTR_3g007360 27.900 319 184 14 15 322 55 338 1.62e-21 95.5
MsG0180000831.01.T01 MTR_4g023090 27.485 342 213 12 6 340 10 323 3.00e-21 94.4
MsG0180000831.01.T01 MTR_1g068835 25.753 365 232 16 12 365 4 340 3.37e-21 94.4
MsG0180000831.01.T01 MTR_2g046920 26.994 326 183 14 11 322 23 307 3.60e-21 94.0
MsG0180000831.01.T01 MTR_3g103020 26.761 355 216 12 11 353 19 341 3.75e-21 94.0
MsG0180000831.01.T01 MTR_5g057710 29.538 325 175 13 12 322 46 330 4.06e-21 94.4
MsG0180000831.01.T01 MTR_3g034130 27.500 360 224 15 7 353 4 339 1.02e-20 92.8
MsG0180000831.01.T01 MTR_5g036250 53.488 86 39 1 283 368 8 92 1.10e-20 89.0
MsG0180000831.01.T01 MTR_8g101580 25.068 367 217 15 12 359 45 372 1.44e-20 92.8
MsG0180000831.01.T01 MTR_3g014570 29.063 320 185 14 12 322 29 315 2.13e-20 92.0
MsG0180000831.01.T01 MTR_2g028130 22.727 396 235 16 12 365 5 371 2.67e-20 92.0
MsG0180000831.01.T01 MTR_1g094210 24.800 375 208 15 12 363 57 380 3.28e-20 91.7
MsG0180000831.01.T01 MTR_2g046900 27.900 319 197 12 11 322 27 319 3.30e-20 91.7
MsG0180000831.01.T01 MTR_1g094210 25.393 382 206 16 12 365 57 387 3.84e-20 91.3
MsG0180000831.01.T01 MTR_2g031720 26.359 368 232 14 12 365 6 348 4.34e-20 91.3
MsG0180000831.01.T01 MTR_7g407070 27.964 329 192 14 12 320 32 335 6.86e-20 90.9
MsG0180000831.01.T01 MTR_5g097660 52.747 91 42 1 271 360 3 93 7.32e-20 84.7
MsG0180000831.01.T01 MTR_2g024110 26.875 320 197 16 12 323 4 294 9.22e-20 90.1
MsG0180000831.01.T01 MTR_3g013770 27.193 342 220 13 12 350 33 348 9.53e-20 90.1
MsG0180000831.01.T01 MTR_0667s0010 26.627 338 184 17 12 322 6 306 1.03e-19 90.1
MsG0180000831.01.T01 MTR_4g117780 27.195 353 213 14 12 353 11 330 1.77e-19 89.0
MsG0180000831.01.T01 MTR_3g034180 28.926 363 216 16 6 353 117 452 2.31e-19 89.7
MsG0180000831.01.T01 MTR_3g006570 24.709 344 219 13 12 350 21 329 2.50e-19 89.0
MsG0180000831.01.T01 MTR_4g094400 47.619 105 42 2 229 320 7 111 4.07e-19 83.2
MsG0180000831.01.T01 MTR_5g096050 44.554 101 42 1 225 325 18 104 4.25e-19 82.8
MsG0180000831.01.T01 MTR_1g068860 25.745 369 229 16 12 365 4 342 4.36e-19 88.2
MsG0180000831.01.T01 MTR_2g029990 26.331 338 222 13 13 350 52 362 5.61e-19 88.2
MsG0180000831.01.T01 MTR_1g097330 27.500 320 185 13 12 322 16 297 6.37e-19 88.2
MsG0180000831.01.T01 MTR_4g116330 28.610 367 180 16 6 362 17 311 6.37e-19 87.0
MsG0180000831.01.T01 MTR_3g006530 25.000 356 212 16 12 352 40 355 6.49e-19 87.8
MsG0180000831.01.T01 MTR_1g054575 28.947 342 199 15 12 347 52 355 6.61e-19 89.0
MsG0180000831.01.T01 MTR_4g023130 25.356 351 184 9 6 353 3 278 9.30e-19 86.3
MsG0180000831.01.T01 MTR_2g055970 27.348 362 226 12 4 357 203 535 9.99e-19 88.2
MsG0180000831.01.T01 MTR_2g028140 25.434 346 194 14 12 322 5 321 1.07e-18 87.4
MsG0180000831.01.T01 MTR_7g070440 25.886 367 210 14 9 347 4 336 1.30e-18 86.7
MsG0180000831.01.T01 MTR_1g068875 24.932 369 229 17 12 365 4 339 1.96e-18 86.3
MsG0180000831.01.T01 MTR_2g022020 40.594 101 59 1 267 367 2 101 2.56e-18 80.5
MsG0180000831.01.T01 MTR_2g028160 25.641 351 202 16 12 332 5 326 2.66e-18 86.3
MsG0180000831.01.T01 MTR_4g107820 26.230 366 217 14 12 363 36 362 3.01e-18 85.9
MsG0180000831.01.T01 MTR_4g107780 26.230 366 217 14 12 363 36 362 3.01e-18 85.9
MsG0180000831.01.T01 MTR_2g026010 25.984 381 217 16 12 365 4 346 3.45e-18 85.9
MsG0180000831.01.T01 MTR_4g109270 26.997 363 201 15 12 353 8 327 3.66e-18 85.1
MsG0180000831.01.T01 MTR_7g055870 26.722 363 206 12 14 337 15 356 3.74e-18 85.9
MsG0180000831.01.T01 MTR_4g107780 26.230 366 217 14 12 363 36 362 3.79e-18 85.9
MsG0180000831.01.T01 MTR_4g107820 26.230 366 217 14 12 363 36 362 3.93e-18 85.5
MsG0180000831.01.T01 MTR_4g061340 27.660 329 181 14 12 322 26 315 4.64e-18 85.1
MsG0180000831.01.T01 MTR_2g021155 28.339 307 193 14 15 320 39 319 4.68e-18 86.7
MsG0180000831.01.T01 MTR_4g023440 27.451 357 169 17 11 353 17 297 4.85e-18 84.7
MsG0180000831.01.T01 MTR_4g094365 26.197 355 230 12 3 353 1 327 5.40e-18 84.7
MsG0180000831.01.T01 MTR_3g007330 25.472 318 192 14 12 322 48 327 7.71e-18 84.7
MsG0180000831.01.T01 MTR_4g024890 24.933 373 210 15 11 347 9 347 1.17e-17 84.0
MsG0180000831.01.T01 MTR_2g024100 24.282 383 234 16 14 365 9 366 1.30e-17 84.0
MsG0180000831.01.T01 MTR_2g021050 25.067 371 221 15 12 365 5 335 1.53e-17 83.6
MsG0180000831.01.T01 MTR_4g055060 25.994 327 193 15 12 323 30 322 1.60e-17 83.6
MsG0180000831.01.T01 MTR_4g117770 27.147 361 205 17 11 353 10 330 1.67e-17 83.6
MsG0180000831.01.T01 MTR_4g117810 27.147 361 205 17 11 353 10 330 1.67e-17 83.6
MsG0180000831.01.T01 MTR_3g047540 54.286 70 26 2 198 267 5 68 1.97e-17 77.0
MsG0180000831.01.T01 MTR_2g031680 26.415 371 221 16 12 365 6 341 2.26e-17 83.2
MsG0180000831.01.T01 MTR_2g426020 25.065 383 231 20 12 365 6 361 2.31e-17 83.2
MsG0180000831.01.T01 MTR_3g007430 25.240 313 199 13 15 322 46 328 2.70e-17 82.8
MsG0180000831.01.T01 MTR_8g467140 27.077 325 186 13 11 322 31 317 2.73e-17 82.4
MsG0180000831.01.T01 MTR_2g425980 25.469 373 231 17 12 359 5 355 3.61e-17 82.8
MsG0180000831.01.T01 MTR_1g097490 28.371 356 211 16 12 359 49 368 4.33e-17 82.4
MsG0180000831.01.T01 MTR_5g011200 25.872 344 220 16 12 350 17 330 4.55e-17 82.0
MsG0180000831.01.T01 MTR_4g117750 28.571 357 205 17 11 353 2 322 5.21e-17 82.8
MsG0180000831.01.T01 MTR_3g009310 29.503 322 181 17 12 323 42 327 6.67e-17 82.0
MsG0180000831.01.T01 MTR_3g034160 28.255 361 222 13 6 353 3 339 7.70e-17 81.6
MsG0180000831.01.T01 MTR_2g021860 44.086 93 49 3 93 183 13 104 9.41e-17 77.0
MsG0180000831.01.T01 MTR_3g010430 24.725 364 218 15 12 360 36 358 1.03e-16 81.6
MsG0180000831.01.T01 MTR_2g028110 25.000 376 223 16 12 365 4 342 1.10e-16 81.3
MsG0180000831.01.T01 MTR_2g047832 25.074 339 193 13 11 322 28 332 1.10e-16 81.3
MsG0180000831.01.T01 MTR_1g047080 28.916 249 135 13 50 287 2 219 1.13e-16 80.1
MsG0180000831.01.T01 MTR_3g011060 26.171 363 221 14 12 359 28 358 2.13e-16 80.5
MsG0180000831.01.T01 MTR_7g055977 25.936 374 197 13 11 343 6 340 2.52e-16 80.1
MsG0180000831.01.T01 MTR_2g021190 24.198 343 230 13 12 352 21 335 2.62e-16 80.1
MsG0180000831.01.T01 MTR_6g048120 25.843 356 217 17 12 352 36 359 2.77e-16 80.1
MsG0180000831.01.T01 MTR_0115s0020 25.568 352 236 15 12 347 10 351 3.55e-16 79.7
MsG0180000831.01.T01 MTR_3g030350 24.490 343 218 15 12 350 35 340 3.76e-16 79.7
MsG0180000831.01.T01 MTR_1g050305 55.263 76 29 2 290 360 23 98 4.76e-16 74.7
MsG0180000831.01.T01 MTR_2g046830 26.316 323 189 16 11 322 24 308 7.60e-16 79.0
MsG0180000831.01.T01 MTR_5g057020 27.160 324 169 14 12 322 46 315 8.92e-16 78.2
MsG0180000831.01.T01 MTR_5g022420 25.698 358 215 17 11 356 26 344 1.29e-15 77.8
MsG0180000831.01.T01 MTR_2g031640 25.532 376 221 17 12 365 6 344 2.30e-15 77.0
MsG0180000831.01.T01 MTR_7g055930 25.069 363 212 12 14 337 15 356 3.16e-15 77.0
MsG0180000831.01.T01 MTR_1g442850 25.298 336 195 14 10 322 3 305 4.82e-15 76.3
MsG0180000831.01.T01 MTR_2g426070 24.607 382 233 17 13 365 7 362 4.89e-15 76.3
MsG0180000831.01.T01 MTR_4g023380 23.158 380 223 11 1 353 5 342 4.92e-15 76.3
MsG0180000831.01.T01 MTR_6g048140 25.466 322 192 12 12 320 39 325 5.77e-15 76.3
MsG0180000831.01.T01 MTR_4g023070 24.654 361 225 13 12 353 3 335 6.56e-15 75.9
MsG0180000831.01.T01 MTR_3g083010 23.200 375 232 15 12 353 6 357 6.90e-15 75.9
MsG0180000831.01.T01 MTR_3g058480 26.316 285 166 13 12 280 39 295 8.13e-15 75.1
MsG0180000831.01.T01 MTR_3g036290 24.561 342 210 14 12 350 22 318 8.47e-15 75.5
MsG0180000831.01.T01 MTR_6g016285 26.396 394 200 20 12 348 21 381 9.90e-15 75.5
MsG0180000831.01.T01 MTR_2g426060 24.804 383 234 21 12 366 6 362 1.00e-14 75.5
MsG0180000831.01.T01 MTR_7g061060 22.571 350 204 13 3 323 4 315 1.31e-14 75.1
MsG0180000831.01.T01 MTR_3g024110 25.000 356 195 16 12 350 101 401 1.68e-14 75.1
MsG0180000831.01.T01 MTR_6g053240 24.138 319 204 14 12 320 28 318 2.04e-14 74.3
MsG0180000831.01.T01 MTR_2g046800 24.740 384 225 17 12 359 14 369 3.21e-14 73.9
MsG0180000831.01.T01 MTR_3g058470 23.839 323 178 13 12 322 37 303 5.31e-14 73.2
MsG0180000831.01.T01 MTR_4g031770 26.480 321 185 16 12 319 4 286 5.56e-14 72.8
MsG0180000831.01.T01 MTR_1g054725 25.568 352 207 20 10 347 18 328 5.57e-14 72.8
MsG0180000831.01.T01 MTR_3g036430 23.315 356 196 16 12 358 20 307 6.09e-14 72.8
MsG0180000831.01.T01 MTR_4g030110 23.469 392 212 15 2 352 20 364 6.62e-14 72.8
MsG0180000831.01.T01 MTR_8g041440 34.821 112 47 3 3 106 6 99 6.95e-14 68.2
MsG0180000831.01.T01 MTR_5g070080 27.013 385 194 18 11 353 9 348 7.23e-14 72.8
MsG0180000831.01.T01 MTR_2g078900 24.079 353 206 18 12 350 33 337 7.54e-14 72.4
MsG0180000831.01.T01 MTR_3g036335 23.276 348 220 17 12 350 41 350 9.73e-14 72.4
MsG0180000831.01.T01 MTR_3g436150 27.795 331 184 15 12 320 32 329 1.06e-13 72.4
MsG0180000831.01.T01 MTR_8g013010 29.213 267 149 14 4 257 43 282 1.61e-13 71.2
MsG0180000831.01.T01 MTR_7g056710 23.939 330 200 12 11 323 17 312 1.62e-13 71.6
MsG0180000831.01.T01 MTR_1g009110 25.140 358 222 15 14 353 16 345 2.26e-13 71.2
MsG0180000831.01.T01 MTR_2g426090 24.934 377 231 19 15 365 9 359 2.45e-13 71.2
MsG0180000831.01.T01 MTR_3g030330 24.444 315 196 13 12 322 20 296 2.48e-13 70.9
MsG0180000831.01.T01 MTR_5g094360 36.538 104 57 3 141 236 40 142 2.65e-13 67.4
MsG0180000831.01.T01 MTR_2g078850 25.141 354 198 15 15 350 33 337 3.54e-13 70.5
MsG0180000831.01.T01 MTR_7g057270 26.087 345 189 14 12 322 26 338 4.20e-13 70.5
MsG0180000831.01.T01 MTR_2g021252 24.340 341 197 17 20 350 55 344 4.20e-13 70.5
MsG0180000831.01.T01 MTR_2g025420 23.684 342 205 15 12 322 6 322 6.98e-13 69.7
MsG0180000831.01.T01 MTR_3g009240 24.601 313 202 12 12 322 36 316 7.07e-13 69.7
MsG0180000831.01.T01 MTR_0627s0010 22.449 343 220 11 12 325 38 363 7.26e-13 69.7
MsG0180000831.01.T01 MTR_3g058440 25.806 279 177 12 12 282 35 291 7.45e-13 68.9
MsG0180000831.01.T01 MTR_7g056290 24.198 343 195 13 14 322 24 335 8.32e-13 69.7
MsG0180000831.01.T01 MTR_2g461450 23.967 363 209 17 12 349 18 338 8.50e-13 69.3
MsG0180000831.01.T01 MTR_5g070130 24.862 362 231 13 6 353 5 339 8.91e-13 69.3
MsG0180000831.01.T01 MTR_4g108820 25.157 318 174 11 5 322 35 288 8.97e-13 68.9
MsG0180000831.01.T01 MTR_7g062100 23.925 372 214 15 12 348 24 361 9.10e-13 69.3
MsG0180000831.01.T01 MTR_7g061090 22.636 349 199 13 11 322 21 335 1.12e-12 69.3
MsG0180000831.01.T01 MTR_5g007610 23.881 335 194 13 12 323 41 337 1.12e-12 69.3
MsG0180000831.01.T01 MTR_6g021880 24.272 309 202 13 23 322 31 316 1.30e-12 68.9
MsG0180000831.01.T01 MTR_7g066000 22.849 337 207 11 11 322 24 332 1.47e-12 68.9
MsG0180000831.01.T01 MTR_3g010970 23.392 342 207 13 15 350 51 343 1.76e-12 68.6
MsG0180000831.01.T01 MTR_4g109280 27.066 351 213 15 10 353 6 320 1.91e-12 68.2
MsG0180000831.01.T01 MTR_3g097190 42.466 73 42 0 288 360 9 81 2.85e-12 65.1
MsG0180000831.01.T01 MTR_8g040935 30.625 160 100 5 200 353 15 169 3.04e-12 65.9
MsG0180000831.01.T01 MTR_8g032390 26.912 353 197 16 11 353 39 340 3.06e-12 67.8
MsG0180000831.01.T01 MTR_3g007270 24.850 334 197 14 12 325 47 346 3.31e-12 67.8
MsG0180000831.01.T01 MTR_6g087660 45.455 88 44 2 5 88 10 97 3.32e-12 65.5
MsG0180000831.01.T01 MTR_5g057643 31.073 177 94 6 12 178 46 204 3.33e-12 66.6
MsG0180000831.01.T01 MTR_7g056003 25.588 340 188 14 14 322 17 322 3.65e-12 67.8
MsG0180000831.01.T01 MTR_7g007300 24.259 371 210 18 12 360 103 424 4.90e-12 67.4
MsG0180000831.01.T01 MTR_6g060650 28.212 358 224 17 6 353 2 336 4.93e-12 67.0
MsG0180000831.01.T01 MTR_4g030830 23.457 405 236 18 6 367 3 376 6.69e-12 66.6
MsG0180000831.01.T01 MTR_7g056390 23.907 343 196 14 14 322 20 331 6.76e-12 67.0
MsG0180000831.01.T01 MTR_3g009260 26.899 316 182 16 15 322 44 318 9.77e-12 66.2
MsG0180000831.01.T01 MTR_4g080200 25.287 261 156 9 15 267 6 235 1.06e-11 65.9
MsG0180000831.01.T01 MTR_7g061050 21.777 349 203 14 3 322 4 311 1.07e-11 66.2
MsG0180000831.01.T01 MTR_2g031700 26.255 259 148 12 12 261 6 230 1.13e-11 65.5
MsG0180000831.01.T01 MTR_8g062660 22.739 387 230 17 1 365 11 350 1.35e-11 66.2
MsG0180000831.01.T01 MTR_7g062060 24.451 364 203 17 1 323 1 333 1.50e-11 65.9
MsG0180000831.01.T01 MTR_8g099460 23.545 378 234 16 12 365 5 351 1.55e-11 65.9
MsG0180000831.01.T01 MTR_6g065980 24.367 316 189 14 12 322 16 286 1.93e-11 65.1
MsG0180000831.01.T01 MTR_6g007135 24.444 315 208 15 15 322 29 320 2.04e-11 65.1
MsG0180000831.01.T01 MTR_5g010550 22.525 404 233 15 12 361 44 421 2.06e-11 65.5
MsG0180000831.01.T01 MTR_7g060940 22.843 394 230 15 12 368 22 378 2.09e-11 65.1
MsG0180000831.01.T01 MTR_1g088120 24.069 349 196 12 11 322 9 325 2.15e-11 65.5
MsG0180000831.01.T01 MTR_1g068905 24.314 255 145 11 12 261 4 215 2.17e-11 64.7
MsG0180000831.01.T01 MTR_5g010550 22.525 404 233 15 12 361 58 435 2.25e-11 65.5
MsG0180000831.01.T01 MTR_3g010870 23.596 356 201 16 12 350 37 338 2.36e-11 65.1
MsG0180000831.01.T01 MTR_4g118380 26.558 369 227 15 6 353 2 347 2.49e-11 64.7
MsG0180000831.01.T01 MTR_4g013180 23.810 336 204 12 11 322 10 317 2.63e-11 65.1
MsG0180000831.01.T01 MTR_2g021210 25.797 345 206 20 12 350 84 384 2.99e-11 65.1
MsG0180000831.01.T01 MTR_4g023150 24.650 357 231 12 3 353 1 325 3.17e-11 64.3
MsG0180000831.01.T01 MTR_4g023190 24.377 361 226 12 3 353 1 324 3.24e-11 64.3
MsG0180000831.01.T01 MTR_7g050480 24.745 392 223 20 11 368 21 374 3.58e-11 64.7
MsG0180000831.01.T01 MTR_5g057040 31.073 177 94 6 12 178 46 204 3.66e-11 65.5
MsG0180000831.01.T01 MTR_8g073550 27.907 215 117 11 11 214 29 216 3.78e-11 62.8
MsG0180000831.01.T01 MTR_3g023940 23.770 366 222 12 12 359 34 360 3.93e-11 64.3
MsG0180000831.01.T01 MTR_7g050520 23.724 392 227 19 11 368 21 374 5.14e-11 63.9
MsG0180000831.01.T01 MTR_0064s0160 24.528 371 244 14 11 360 41 396 5.57e-11 63.9
MsG0180000831.01.T01 MTR_7g028660 23.035 369 232 11 11 354 10 351 6.43e-11 63.5
MsG0180000831.01.T01 MTR_5g046300 25.079 315 193 15 12 320 4 281 6.89e-11 63.5
MsG0180000831.01.T01 MTR_5g046290 25.079 315 193 15 12 320 4 281 6.89e-11 63.5
MsG0180000831.01.T01 MTR_7g013590 22.872 376 237 16 15 372 39 379 7.08e-11 63.5
MsG0180000831.01.T01 MTR_7g077070 22.606 376 229 14 12 342 16 374 9.52e-11 63.5
MsG0180000831.01.T01 MTR_3g083640 24.308 325 181 15 12 319 55 331 9.82e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000831.01.T01 AT3G06240 24.297 391 236 15 12 367 36 401 9.26e-19 87.8
MsG0180000831.01.T01 AT4G12560 25.767 326 203 13 12 323 4 304 1.87e-16 80.9
MsG0180000831.01.T01 AT4G12560 25.767 326 203 13 12 323 4 304 1.87e-16 80.9
MsG0180000831.01.T01 AT4G12560 25.767 326 203 13 12 323 4 304 1.87e-16 80.9
MsG0180000831.01.T01 AT5G15660 24.290 317 207 13 12 324 28 315 4.09e-12 67.8
MsG0180000831.01.T01 AT4G22390 25.157 318 186 16 82 368 55 351 5.72e-12 67.0
MsG0180000831.01.T01 AT4G22390 25.157 318 186 16 82 368 55 351 6.59e-12 67.0
MsG0180000831.01.T01 AT3G16210 26.437 174 102 7 10 182 3 151 5.73e-11 63.9
MsG0180000831.01.T01 AT5G62660 24.085 328 175 14 12 316 41 317 9.71e-11 63.2

Find 69 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAACATGCTCTTGAAATT+AGG 0.074484 1:-11830072 None:intergenic
ATTCTTGGTTCTGGAATTAA+TGG 0.146238 1:+11830270 MsG0180000831.01.T01:CDS
ATCATTGTAATAGGAATTAT+TGG 0.235142 1:-11830109 None:intergenic
AGATATTGATAAGGTATATT+TGG 0.239767 1:+11830668 MsG0180000831.01.T01:CDS
AAAACATGCTCTTGAAATTA+GGG 0.240368 1:-11830071 None:intergenic
GCTCTTGATATTAATATTCT+TGG 0.257367 1:+11830255 MsG0180000831.01.T01:CDS
CAAGGAGGGCTTGGCATTAC+AGG 0.262679 1:+11831014 MsG0180000831.01.T01:CDS
AATTACTATCTGAGAATAAA+AGG 0.286475 1:-11831041 None:intergenic
TACCTATCTATTACATTAGA+TGG 0.300250 1:-11830396 None:intergenic
ATTTGTCTTGGGCTTCCTAT+TGG 0.302252 1:+11830912 MsG0180000831.01.T01:CDS
TACGTCCACGCCTTCATATA+TGG 0.307569 1:+11830725 MsG0180000831.01.T01:CDS
ACGTTGACTTCCTCAATAGA+TGG 0.314765 1:-11830345 None:intergenic
GATATTAATATTCTTGGTTC+TGG 0.322777 1:+11830261 MsG0180000831.01.T01:CDS
TTGAGCAAGTGTACACTAAT+GGG 0.323162 1:+11830616 MsG0180000831.01.T01:CDS
CTCATGGAAGAAACTTGATT+TGG 0.337996 1:+11830557 MsG0180000831.01.T01:CDS
AGGCTATATATCTCCCATAA+AGG 0.347292 1:-11830525 None:intergenic
GAGACATGAATCATTGTAAT+AGG 0.347361 1:-11830118 None:intergenic
CCATTCTTTCCTACTCCAAT+AGG 0.354840 1:-11830927 None:intergenic
TTTGAGCAAGTGTACACTAA+TGG 0.365730 1:+11830615 MsG0180000831.01.T01:CDS
GGAAGCCCAAGACAAATTAA+TGG 0.366795 1:-11830906 None:intergenic
ACAATAAAATCAAATTAGAT+TGG 0.369866 1:+11830211 MsG0180000831.01.T01:CDS
ATATTTGGTGTCATTTGATC+TGG 0.374089 1:+11830683 MsG0180000831.01.T01:CDS
ATTGTTTGTCTCTATGTTGA+TGG 0.391532 1:+11830294 MsG0180000831.01.T01:CDS
ATTGAACCATTAATTTGTCT+TGG 0.400705 1:+11830900 MsG0180000831.01.T01:CDS
TTGAACCATTAATTTGTCTT+GGG 0.402484 1:+11830901 MsG0180000831.01.T01:CDS
TCAAGAGCATCTTCTTGAAA+TGG 0.404173 1:-11830240 None:intergenic
TCAGCACTCAAATTATTAGT+TGG 0.405651 1:-11830585 None:intergenic
CGTCAATGAAGATGAAGAAT+TGG 0.408136 1:+11830962 MsG0180000831.01.T01:CDS
TGATAGTATTGATTCTGAAT+TGG 0.411998 1:+11830749 MsG0180000831.01.T01:CDS
ATATCTATTCTGGGTGAAAT+CGG 0.415616 1:+11830846 MsG0180000831.01.T01:CDS
ATAGAGAAGACAAGATCATT+AGG 0.422129 1:-11829973 None:intergenic
TACACATTTAAATCGGTTCA+AGG 0.442878 1:-11830019 None:intergenic
GGCTATATATCTCCCATAAA+GGG 0.443388 1:-11830524 None:intergenic
AGGTATCAACATCATGGGTT+TGG 0.450383 1:+11830414 MsG0180000831.01.T01:CDS
TTATGTCAGAGATGACTATA+AGG 0.451106 1:+11830443 MsG0180000831.01.T01:CDS
AATGGGGTGTGCCATTGGTT+GGG 0.465976 1:+11830633 MsG0180000831.01.T01:CDS
ATCTATATAATAATTTAGAT+CGG 0.468449 1:-11830490 None:intergenic
TTAAATGTGTACGAAAATCA+TGG 0.472002 1:+11830031 MsG0180000831.01.T01:CDS
ACACTAATGGGGTGTGCCAT+TGG 0.481327 1:+11830628 MsG0180000831.01.T01:CDS
TAATGGGGTGTGCCATTGGT+TGG 0.483973 1:+11830632 MsG0180000831.01.T01:CDS
TACCATCTAATGTAATAGAT+AGG 0.490098 1:+11830394 MsG0180000831.01.T01:CDS
TGTGCCATTGGTTGGGCGAA+AGG 0.492765 1:+11830640 MsG0180000831.01.T01:CDS
CCTATTGGAGTAGGAAAGAA+TGG 0.493014 1:+11830927 MsG0180000831.01.T01:CDS
AAATCGGTGTAAAAGAATCA+TGG 0.495574 1:+11830862 MsG0180000831.01.T01:CDS
CTTGGGCTTCCTATTGGAGT+AGG 0.500241 1:+11830918 MsG0180000831.01.T01:CDS
TCTATATAATAATTTAGATC+GGG 0.502088 1:-11830489 None:intergenic
TAGTATTGATTCTGAATTGG+AGG 0.518636 1:+11830752 MsG0180000831.01.T01:CDS
AAGGAAAATAGATATTGATA+AGG 0.522014 1:+11830659 MsG0180000831.01.T01:CDS
ATAGATAGGTATCAACATCA+TGG 0.524241 1:+11830408 MsG0180000831.01.T01:CDS
CGTTGACTTCCTCAATAGAT+GGG 0.534374 1:-11830344 None:intergenic
GACACAATTCAAGGAGGGCT+TGG 0.536439 1:+11831005 MsG0180000831.01.T01:CDS
ATACTATCATCCATATATGA+AGG 0.541720 1:-11830735 None:intergenic
TTAAGTACAGACACAATTCA+AGG 0.548114 1:+11830996 MsG0180000831.01.T01:CDS
ATCATTGGATATCAAAGCAA+TGG 0.552110 1:-11830802 None:intergenic
GTCATTTGATCTGGCTAATG+AGG 0.552856 1:+11830692 MsG0180000831.01.T01:CDS
AATGGCTCTTTCAAATGAGA+AGG 0.555311 1:+11829936 None:intergenic
ATAGCCTTAAAAGCAACTCA+TGG 0.556796 1:+11830541 MsG0180000831.01.T01:CDS
ACTGTGGAACCCATCTATTG+AGG 0.561945 1:+11830335 MsG0180000831.01.T01:CDS
TAAATGTGTACGAAAATCAT+GGG 0.561957 1:+11830032 MsG0180000831.01.T01:CDS
GCATCTTCTTGAAATGGATA+CGG 0.564418 1:-11830234 None:intergenic
TAGATGGTATTGACACACTT+CGG 0.584242 1:-11830380 None:intergenic
ATTGACACACTTCGGTTGCG+AGG 0.585703 1:-11830372 None:intergenic
TAGATAGGTATCAACATCAT+GGG 0.587798 1:+11830409 MsG0180000831.01.T01:CDS
GTACAGACACAATTCAAGGA+GGG 0.601660 1:+11831000 MsG0180000831.01.T01:CDS
TGAGCAAGTGTACACTAATG+GGG 0.614552 1:+11830617 MsG0180000831.01.T01:CDS
ATCATCCATATATGAAGGCG+TGG 0.615754 1:-11830730 None:intergenic
CCAGAAAATAAGCTCAACAA+AGG 0.625019 1:-11830177 None:intergenic
CTGACAAAGTGTGCTTTACG+AGG 0.651024 1:-11830140 None:intergenic
AGTACAGACACAATTCAAGG+AGG 0.686556 1:+11830999 MsG0180000831.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATATAATAATTTAGAT+CGG - Chr1:11830493-11830512 None:intergenic 10.0%
!! ACAATAAAATCAAATTAGAT+TGG + Chr1:11830211-11830230 MsG0180000831.01.T01:CDS 15.0%
!! TCTATATAATAATTTAGATC+GGG - Chr1:11830492-11830511 None:intergenic 15.0%
!! AAGGAAAATAGATATTGATA+AGG + Chr1:11830659-11830678 MsG0180000831.01.T01:CDS 20.0%
!! AGATATTGATAAGGTATATT+TGG + Chr1:11830668-11830687 MsG0180000831.01.T01:CDS 20.0%
!! ATCATTGTAATAGGAATTAT+TGG - Chr1:11830112-11830131 None:intergenic 20.0%
!!! ATTTTCGTACACATTTAAAT+CGG - Chr1:11830029-11830048 None:intergenic 20.0%
!!! TTAATTCAAAAGTTTTACTG+TGG + Chr1:11830319-11830338 MsG0180000831.01.T01:CDS 20.0%
! AAAACATGCTCTTGAAATTA+GGG - Chr1:11830074-11830093 None:intergenic 25.0%
! ATACTATCATCCATATATGA+AGG - Chr1:11830738-11830757 None:intergenic 25.0%
! GATATTAATATTCTTGGTTC+TGG + Chr1:11830261-11830280 MsG0180000831.01.T01:CDS 25.0%
! GCTCTTGATATTAATATTCT+TGG + Chr1:11830255-11830274 MsG0180000831.01.T01:CDS 25.0%
! TAAATGTGTACGAAAATCAT+GGG + Chr1:11830032-11830051 MsG0180000831.01.T01:CDS 25.0%
! TACCATCTAATGTAATAGAT+AGG + Chr1:11830394-11830413 MsG0180000831.01.T01:CDS 25.0%
! TACCTATCTATTACATTAGA+TGG - Chr1:11830399-11830418 None:intergenic 25.0%
! TTAAATGTGTACGAAAATCA+TGG + Chr1:11830031-11830050 MsG0180000831.01.T01:CDS 25.0%
!! ACTTTTCACATATCTATTCT+GGG + Chr1:11830837-11830856 MsG0180000831.01.T01:CDS 25.0%
!! ATATGTTTTACAACCCTTTA+TGG + Chr1:11830511-11830530 MsG0180000831.01.T01:CDS 25.0%
!! TACTTTTCACATATCTATTC+TGG + Chr1:11830836-11830855 MsG0180000831.01.T01:CDS 25.0%
!! TATGTTTTACAACCCTTTAT+GGG + Chr1:11830512-11830531 MsG0180000831.01.T01:CDS 25.0%
!!! ATTGAACCATTAATTTGTCT+TGG + Chr1:11830900-11830919 MsG0180000831.01.T01:CDS 25.0%
!!! TGATAGTATTGATTCTGAAT+TGG + Chr1:11830749-11830768 MsG0180000831.01.T01:CDS 25.0%
!!! TTGAACCATTAATTTGTCTT+GGG + Chr1:11830901-11830920 MsG0180000831.01.T01:CDS 25.0%
AAATCGGTGTAAAAGAATCA+TGG + Chr1:11830862-11830881 MsG0180000831.01.T01:CDS 30.0%
ATAGAGAAGACAAGATCATT+AGG - Chr1:11829976-11829995 None:intergenic 30.0%
ATAGATAGGTATCAACATCA+TGG + Chr1:11830408-11830427 MsG0180000831.01.T01:CDS 30.0%
ATATCTATTCTGGGTGAAAT+CGG + Chr1:11830846-11830865 MsG0180000831.01.T01:CDS 30.0%
ATCATTGGATATCAAAGCAA+TGG - Chr1:11830805-11830824 None:intergenic 30.0%
ATTGTTTGTCTCTATGTTGA+TGG + Chr1:11830294-11830313 MsG0180000831.01.T01:CDS 30.0%
CAAAACATGCTCTTGAAATT+AGG - Chr1:11830075-11830094 None:intergenic 30.0%
GAGACATGAATCATTGTAAT+AGG - Chr1:11830121-11830140 None:intergenic 30.0%
TAGATAGGTATCAACATCAT+GGG + Chr1:11830409-11830428 MsG0180000831.01.T01:CDS 30.0%
TCAGCACTCAAATTATTAGT+TGG - Chr1:11830588-11830607 None:intergenic 30.0%
TTAAGTACAGACACAATTCA+AGG + Chr1:11830996-11831015 MsG0180000831.01.T01:CDS 30.0%
TTATGTCAGAGATGACTATA+AGG + Chr1:11830443-11830462 MsG0180000831.01.T01:CDS 30.0%
! AATTAGGGTTTTCAAATGAG+AGG - Chr1:11830059-11830078 None:intergenic 30.0%
! AGTAGTGATTTTTGCATCAT+TGG - Chr1:11830820-11830839 None:intergenic 30.0%
! ATTAGGGTTTTCAAATGAGA+GGG - Chr1:11830058-11830077 None:intergenic 30.0%
! TACACATTTAAATCGGTTCA+AGG - Chr1:11830022-11830041 None:intergenic 30.0%
!! ATATTTGGTGTCATTTGATC+TGG + Chr1:11830683-11830702 MsG0180000831.01.T01:CDS 30.0%
!! ATTCTTGGTTCTGGAATTAA+TGG + Chr1:11830270-11830289 MsG0180000831.01.T01:CDS 30.0%
!! TAGTATTGATTCTGAATTGG+AGG + Chr1:11830752-11830771 MsG0180000831.01.T01:CDS 30.0%
AGGCTATATATCTCCCATAA+AGG - Chr1:11830528-11830547 None:intergenic 35.0%
CCAGAAAATAAGCTCAACAA+AGG - Chr1:11830180-11830199 None:intergenic 35.0%
CGTCAATGAAGATGAAGAAT+TGG + Chr1:11830962-11830981 MsG0180000831.01.T01:CDS 35.0%
CTCATGGAAGAAACTTGATT+TGG + Chr1:11830557-11830576 MsG0180000831.01.T01:CDS 35.0%
GCATCTTCTTGAAATGGATA+CGG - Chr1:11830237-11830256 None:intergenic 35.0%
GGCTATATATCTCCCATAAA+GGG - Chr1:11830527-11830546 None:intergenic 35.0%
TTGAGCAAGTGTACACTAAT+GGG + Chr1:11830616-11830635 MsG0180000831.01.T01:CDS 35.0%
TTTGAGCAAGTGTACACTAA+TGG + Chr1:11830615-11830634 MsG0180000831.01.T01:CDS 35.0%
! ATAGCCTTAAAAGCAACTCA+TGG + Chr1:11830541-11830560 MsG0180000831.01.T01:CDS 35.0%
!! AATCGGTTCAAGGATTTTAG+AGG - Chr1:11830012-11830031 None:intergenic 35.0%
!! CCTTTGTTGAGCTTATTTTC+TGG + Chr1:11830177-11830196 MsG0180000831.01.T01:CDS 35.0%
!! TAGATGGTATTGACACACTT+CGG - Chr1:11830383-11830402 None:intergenic 35.0%
!! TCAAGAGCATCTTCTTGAAA+TGG - Chr1:11830243-11830262 None:intergenic 35.0%
!! TGAGCTTATTTTCTGGTGAT+AGG + Chr1:11830184-11830203 MsG0180000831.01.T01:CDS 35.0%
!!! TCTTCCATGAGTTGCTTTTA+AGG - Chr1:11830548-11830567 None:intergenic 35.0%
AGGTATCAACATCATGGGTT+TGG + Chr1:11830414-11830433 MsG0180000831.01.T01:CDS 40.0%
AGTACAGACACAATTCAAGG+AGG + Chr1:11830999-11831018 MsG0180000831.01.T01:CDS 40.0%
ATCATCCATATATGAAGGCG+TGG - Chr1:11830733-11830752 None:intergenic 40.0%
ATTTGTCTTGGGCTTCCTAT+TGG + Chr1:11830912-11830931 MsG0180000831.01.T01:CDS 40.0%
CCATTCTTTCCTACTCCAAT+AGG - Chr1:11830930-11830949 None:intergenic 40.0%
CCTATTGGAGTAGGAAAGAA+TGG + Chr1:11830927-11830946 MsG0180000831.01.T01:CDS 40.0%
GGAAGCCCAAGACAAATTAA+TGG - Chr1:11830909-11830928 None:intergenic 40.0%
GTACAGACACAATTCAAGGA+GGG + Chr1:11831000-11831019 MsG0180000831.01.T01:CDS 40.0%
GTCATTTGATCTGGCTAATG+AGG + Chr1:11830692-11830711 MsG0180000831.01.T01:CDS 40.0%
TGAGCAAGTGTACACTAATG+GGG + Chr1:11830617-11830636 MsG0180000831.01.T01:CDS 40.0%
!! ACGTTGACTTCCTCAATAGA+TGG - Chr1:11830348-11830367 None:intergenic 40.0%
!! CGTTGACTTCCTCAATAGAT+GGG - Chr1:11830347-11830366 None:intergenic 40.0%
ACTGTGGAACCCATCTATTG+AGG + Chr1:11830335-11830354 MsG0180000831.01.T01:CDS 45.0%
CTGACAAAGTGTGCTTTACG+AGG - Chr1:11830143-11830162 None:intergenic 45.0%
TACGTCCACGCCTTCATATA+TGG + Chr1:11830725-11830744 MsG0180000831.01.T01:CDS 45.0%
! TTTTCCTTTCGCCCAACCAA+TGG - Chr1:11830647-11830666 None:intergenic 45.0%
ACACTAATGGGGTGTGCCAT+TGG + Chr1:11830628-11830647 MsG0180000831.01.T01:CDS 50.0%
ATTGACACACTTCGGTTGCG+AGG - Chr1:11830375-11830394 None:intergenic 50.0%
CTTGGGCTTCCTATTGGAGT+AGG + Chr1:11830918-11830937 MsG0180000831.01.T01:CDS 50.0%
GACACAATTCAAGGAGGGCT+TGG + Chr1:11831005-11831024 MsG0180000831.01.T01:CDS 50.0%
! AATGGGGTGTGCCATTGGTT+GGG + Chr1:11830633-11830652 MsG0180000831.01.T01:CDS 50.0%
! TAATGGGGTGTGCCATTGGT+TGG + Chr1:11830632-11830651 MsG0180000831.01.T01:CDS 50.0%
CAAGGAGGGCTTGGCATTAC+AGG + Chr1:11831014-11831033 MsG0180000831.01.T01:CDS 55.0%
! TGTGCCATTGGTTGGGCGAA+AGG + Chr1:11830640-11830659 MsG0180000831.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11829937 11831058 11829937 ID=MsG0180000831.01;Name=MsG0180000831.01
Chr1 mRNA 11829937 11831058 11829937 ID=MsG0180000831.01.T01;Parent=MsG0180000831.01;Name=MsG0180000831.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|373
Chr1 exon 11829937 11831058 11829937 ID=MsG0180000831.01.T01:exon:558;Parent=MsG0180000831.01.T01
Chr1 CDS 11829937 11831058 11829937 ID=MsG0180000831.01.T01:cds;Parent=MsG0180000831.01.T01
Gene Sequence

>MsG0180000831.01.T01

ATGGCTCTTTCAAATGAGAAGGTTAGAAATTATATACCTAATGATCTTGTCTTCTCTATTATGTCAAAAGTGCCTCTAAAATCCTTGAACCGATTTAAATGTGTACGAAAATCATGGGCCCTCTCATTTGAAAACCCTAATTTCAAGAGCATGTTTTGCAAAAGTGTTATCTCCAATAATTCCTATTACAATGATTCATGTCTCCTCGTAAAGCACACTTTGTCAGATCTTGATAAGCAACCTTTGTTGAGCTTATTTTCTGGTGATAGGTTTGACAATAAAATCAAATTAGATTGGCCGTATCCATTTCAAGAAGATGCTCTTGATATTAATATTCTTGGTTCTGGAATTAATGGAATTGTTTGTCTCTATGTTGATGGTATTAATTCAAAAGTTTTACTGTGGAACCCATCTATTGAGGAAGTCAACGTCATTCCTCGCAACCGAAGTGTGTCAATACCATCTAATGTAATAGATAGGTATCAACATCATGGGTTTGGTTATGATTATGTCAGAGATGACTATAAGGTGATCAGATATGTCGACTTTTGTCCCGATCTAAATTATTATATAGATATGTTTTACAACCCTTTATGGGAGATATATAGCCTTAAAAGCAACTCATGGAAGAAACTTGATTTGGACATGCCAACTAATAATTTGAGTGCTGAATTTGTTTTTGAGCAAGTGTACACTAATGGGGTGTGCCATTGGTTGGGCGAAAGGAAAATAGATATTGATAAGGTATATTTGGTGTCATTTGATCTGGCTAATGAGGTATTCTTTCTTACGTCCACGCCTTCATATATGGATGATAGTATTGATTCTGAATTGGAGGATACTCGTTTAATGTTGTTAAATGAATCCATTGCTTTGATATCCAATGATGCAAAAATCACTACTTTTCACATATCTATTCTGGGTGAAATCGGTGTAAAAGAATCATGGACTAAGCTATTCATTATTGAACCATTAATTTGTCTTGGGCTTCCTATTGGAGTAGGAAAGAATGGTGATATATTCTTCGTCAATGAAGATGAAGAATTGGTCAAGTATGATTTAAGTACAGACACAATTCAAGGAGGGCTTGGCATTACAGGAGATCCTTTTATTCTCAGATAG
Protein sequence

>MsG0180000831.01.T01

MALSNEKVRNYIPNDLVFSIMSKVPLKSLNRFKCVRKSWALSFENPNFKSMFCKSVISNNSYYNDSCLLVKHTLSDLDKQPLLSLFSGDRFDNKIKLDWPYPFQEDALDINILGSGINGIVCLYVDGINSKVLLWNPSIEEVNVIPRNRSVSIPSNVIDRYQHHGFGYDYVRDDYKVIRYVDFCPDLNYYIDMFYNPLWEIYSLKSNSWKKLDLDMPTNNLSAEFVFEQVYTNGVCHWLGERKIDIDKVYLVSFDLANEVFFLTSTPSYMDDSIDSELEDTRLMLLNESIALISNDAKITTFHISILGEIGVKESWTKLFIIEPLICLGLPIGVGKNGDIFFVNEDEELVKYDLSTDTIQGGLGITGDPFILR*