Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043795.01.T01 | PNY06113.1 | 58.25 | 400 | 150 | 7 | 7 | 397 | 3 | 394 | 5.32E-143 | 422 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043795.01.T01 | Q3E7D1 | 24.458 | 323 | 193 | 10 | 17 | 332 | 26 | 304 | 8.28E-14 | 75.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043795.01.T01 | A0A2K3NSW3 | 58.250 | 400 | 150 | 7 | 7 | 397 | 3 | 394 | 2.54e-143 | 422 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043795.01.T01 | MTR_5g037680 | 52.152 | 395 | 151 | 13 | 17 | 394 | 7 | 380 | 4.32e-114 | 341 |
MsG0880043795.01.T01 | MTR_5g096910 | 49.127 | 401 | 177 | 12 | 8 | 397 | 6 | 390 | 5.49e-106 | 318 |
MsG0880043795.01.T01 | MTR_5g096900 | 55.763 | 321 | 130 | 6 | 7 | 324 | 1 | 312 | 4.77e-105 | 313 |
MsG0880043795.01.T01 | MTR_2g038680 | 46.065 | 432 | 166 | 15 | 6 | 397 | 4 | 408 | 1.62e-104 | 315 |
MsG0880043795.01.T01 | MTR_5g059430 | 44.626 | 428 | 172 | 15 | 11 | 395 | 16 | 421 | 1.78e-102 | 310 |
MsG0880043795.01.T01 | MTR_5g069390 | 46.287 | 404 | 180 | 11 | 17 | 397 | 25 | 414 | 4.29e-101 | 309 |
MsG0880043795.01.T01 | MTR_5g097330 | 43.914 | 419 | 184 | 11 | 6 | 396 | 4 | 399 | 6.07e-99 | 300 |
MsG0880043795.01.T01 | MTR_0129s0070 | 45.343 | 408 | 174 | 14 | 13 | 397 | 12 | 393 | 6.49e-99 | 300 |
MsG0880043795.01.T01 | MTR_8g012090 | 48.691 | 382 | 136 | 13 | 2 | 371 | 1 | 334 | 4.31e-97 | 293 |
MsG0880043795.01.T01 | MTR_0129s0120 | 45.122 | 410 | 176 | 14 | 10 | 396 | 9 | 392 | 3.06e-96 | 293 |
MsG0880043795.01.T01 | MTR_6g086825 | 43.675 | 419 | 168 | 13 | 15 | 395 | 67 | 455 | 3.61e-96 | 295 |
MsG0880043795.01.T01 | MTR_8g063440 | 43.951 | 405 | 188 | 14 | 7 | 397 | 1 | 380 | 8.12e-95 | 289 |
MsG0880043795.01.T01 | MTR_6g080680 | 42.718 | 412 | 184 | 12 | 6 | 394 | 7 | 389 | 4.11e-94 | 288 |
MsG0880043795.01.T01 | MTR_2g022000 | 42.755 | 421 | 186 | 8 | 8 | 392 | 6 | 407 | 4.88e-93 | 286 |
MsG0880043795.01.T01 | MTR_7g017130 | 40.876 | 411 | 188 | 12 | 13 | 397 | 13 | 394 | 1.88e-91 | 281 |
MsG0880043795.01.T01 | MTR_6g090180 | 41.315 | 426 | 199 | 12 | 1 | 396 | 30 | 434 | 4.70e-90 | 278 |
MsG0880043795.01.T01 | MTR_7g017170 | 41.026 | 390 | 179 | 10 | 13 | 379 | 13 | 374 | 4.76e-90 | 278 |
MsG0880043795.01.T01 | MTR_2g021800 | 42.180 | 422 | 188 | 8 | 8 | 392 | 6 | 408 | 5.92e-90 | 278 |
MsG0880043795.01.T01 | MTR_3g011120 | 44.216 | 389 | 175 | 14 | 7 | 382 | 1 | 360 | 6.59e-89 | 273 |
MsG0880043795.01.T01 | MTR_7g017040 | 41.330 | 421 | 193 | 12 | 4 | 397 | 2 | 395 | 1.29e-88 | 274 |
MsG0880043795.01.T01 | MTR_5g097680 | 41.913 | 439 | 197 | 16 | 2 | 397 | 1 | 424 | 6.94e-88 | 273 |
MsG0880043795.01.T01 | MTR_4g028660 | 41.902 | 389 | 179 | 9 | 15 | 380 | 13 | 377 | 2.81e-87 | 270 |
MsG0880043795.01.T01 | MTR_4g027450 | 41.902 | 389 | 179 | 9 | 15 | 380 | 13 | 377 | 2.81e-87 | 270 |
MsG0880043795.01.T01 | MTR_2g021950 | 41.294 | 402 | 199 | 9 | 13 | 396 | 11 | 393 | 1.33e-85 | 266 |
MsG0880043795.01.T01 | MTR_4g130330 | 42.892 | 415 | 181 | 13 | 12 | 397 | 1 | 388 | 2.64e-85 | 265 |
MsG0880043795.01.T01 | MTR_6g079770 | 42.056 | 428 | 186 | 14 | 10 | 397 | 9 | 414 | 5.40e-85 | 265 |
MsG0880043795.01.T01 | MTR_6g461660 | 43.350 | 406 | 191 | 11 | 10 | 396 | 11 | 396 | 5.46e-85 | 265 |
MsG0880043795.01.T01 | MTR_5g097350 | 42.564 | 390 | 173 | 11 | 27 | 396 | 25 | 383 | 7.00e-85 | 264 |
MsG0880043795.01.T01 | MTR_5g097220 | 41.355 | 428 | 178 | 12 | 12 | 396 | 7 | 404 | 7.36e-85 | 264 |
MsG0880043795.01.T01 | MTR_4g028680 | 41.769 | 407 | 191 | 12 | 15 | 397 | 13 | 397 | 2.75e-84 | 263 |
MsG0880043795.01.T01 | MTR_6g478230 | 42.512 | 414 | 170 | 15 | 15 | 395 | 24 | 402 | 2.07e-83 | 261 |
MsG0880043795.01.T01 | MTR_8g041270 | 43.165 | 417 | 182 | 17 | 13 | 397 | 10 | 403 | 3.58e-83 | 260 |
MsG0880043795.01.T01 | MTR_0054s0090 | 41.943 | 422 | 186 | 15 | 8 | 396 | 7 | 402 | 3.90e-83 | 260 |
MsG0880043795.01.T01 | MTR_0054s0100 | 41.315 | 426 | 197 | 16 | 2 | 396 | 1 | 404 | 6.29e-83 | 259 |
MsG0880043795.01.T01 | MTR_2g104340 | 42.754 | 414 | 179 | 15 | 13 | 397 | 9 | 393 | 1.10e-81 | 256 |
MsG0880043795.01.T01 | MTR_4g028510 | 40.842 | 404 | 195 | 11 | 18 | 397 | 16 | 399 | 1.70e-81 | 257 |
MsG0880043795.01.T01 | MTR_7g069550 | 40.931 | 408 | 182 | 14 | 13 | 389 | 9 | 388 | 7.09e-81 | 254 |
MsG0880043795.01.T01 | MTR_8g464770 | 39.801 | 402 | 188 | 12 | 13 | 394 | 7 | 374 | 7.36e-81 | 253 |
MsG0880043795.01.T01 | MTR_1g007410 | 42.092 | 411 | 168 | 16 | 7 | 382 | 11 | 386 | 3.55e-80 | 252 |
MsG0880043795.01.T01 | MTR_4g117550 | 41.262 | 412 | 168 | 18 | 10 | 397 | 9 | 370 | 4.39e-80 | 251 |
MsG0880043795.01.T01 | MTR_8g046310 | 43.500 | 400 | 164 | 18 | 17 | 395 | 15 | 373 | 7.04e-80 | 250 |
MsG0880043795.01.T01 | MTR_2g021770 | 39.765 | 425 | 199 | 12 | 7 | 396 | 1 | 403 | 8.15e-80 | 251 |
MsG0880043795.01.T01 | MTR_6g079810 | 40.723 | 415 | 189 | 12 | 17 | 397 | 69 | 460 | 2.07e-79 | 252 |
MsG0880043795.01.T01 | MTR_0129s0050 | 41.026 | 429 | 177 | 19 | 13 | 397 | 9 | 405 | 2.25e-79 | 250 |
MsG0880043795.01.T01 | MTR_0831s0010 | 38.177 | 406 | 200 | 12 | 12 | 397 | 44 | 418 | 3.21e-79 | 250 |
MsG0880043795.01.T01 | MTR_0134s0060 | 40.426 | 423 | 178 | 15 | 7 | 384 | 1 | 394 | 5.53e-79 | 249 |
MsG0880043795.01.T01 | MTR_7g079640 | 41.425 | 379 | 179 | 13 | 13 | 380 | 8 | 354 | 5.67e-79 | 248 |
MsG0880043795.01.T01 | MTR_4g055820 | 43.432 | 373 | 160 | 13 | 13 | 357 | 9 | 358 | 1.11e-78 | 247 |
MsG0880043795.01.T01 | MTR_4g102410 | 39.953 | 423 | 207 | 13 | 1 | 396 | 44 | 446 | 5.55e-78 | 248 |
MsG0880043795.01.T01 | MTR_2g104280 | 41.050 | 419 | 194 | 15 | 10 | 397 | 6 | 402 | 7.40e-78 | 246 |
MsG0880043795.01.T01 | MTR_5g096630 | 39.110 | 427 | 204 | 13 | 5 | 396 | 5 | 410 | 9.64e-78 | 246 |
MsG0880043795.01.T01 | MTR_4g028750 | 39.481 | 385 | 193 | 9 | 15 | 380 | 13 | 376 | 2.84e-77 | 244 |
MsG0880043795.01.T01 | MTR_1g007450 | 41.832 | 404 | 185 | 15 | 7 | 385 | 1 | 379 | 5.65e-76 | 242 |
MsG0880043795.01.T01 | MTR_2g066170 | 39.312 | 407 | 207 | 15 | 7 | 397 | 1 | 383 | 8.07e-76 | 240 |
MsG0880043795.01.T01 | MTR_2g065860 | 38.308 | 402 | 220 | 12 | 7 | 397 | 1 | 385 | 3.00e-75 | 239 |
MsG0880043795.01.T01 | MTR_5g024260 | 40.247 | 405 | 197 | 14 | 2 | 381 | 1 | 385 | 7.43e-75 | 239 |
MsG0880043795.01.T01 | MTR_8g039500 | 40.053 | 377 | 183 | 12 | 7 | 371 | 1 | 346 | 3.49e-74 | 235 |
MsG0880043795.01.T01 | MTR_8g013000 | 42.440 | 377 | 160 | 14 | 13 | 360 | 5 | 353 | 5.00e-74 | 236 |
MsG0880043795.01.T01 | MTR_2g066200 | 38.235 | 408 | 210 | 14 | 7 | 396 | 1 | 384 | 8.27e-74 | 235 |
MsG0880043795.01.T01 | MTR_5g072060 | 42.513 | 374 | 171 | 13 | 17 | 377 | 5 | 347 | 1.13e-73 | 241 |
MsG0880043795.01.T01 | MTR_2g064950 | 38.971 | 408 | 189 | 14 | 13 | 391 | 5 | 381 | 5.39e-73 | 233 |
MsG0880043795.01.T01 | MTR_8g046200 | 40.047 | 427 | 184 | 17 | 17 | 395 | 15 | 417 | 6.74e-73 | 234 |
MsG0880043795.01.T01 | MTR_7g111700 | 41.119 | 411 | 150 | 14 | 17 | 397 | 14 | 362 | 8.32e-73 | 232 |
MsG0880043795.01.T01 | MTR_5g074850 | 41.346 | 416 | 178 | 18 | 3 | 382 | 19 | 404 | 1.33e-72 | 244 |
MsG0880043795.01.T01 | MTR_6g090250 | 39.078 | 412 | 178 | 13 | 36 | 395 | 29 | 419 | 1.80e-72 | 233 |
MsG0880043795.01.T01 | MTR_2g066150 | 37.280 | 397 | 201 | 13 | 7 | 396 | 1 | 356 | 5.43e-72 | 229 |
MsG0880043795.01.T01 | MTR_5g097850 | 49.650 | 286 | 86 | 9 | 124 | 397 | 3 | 242 | 2.17e-71 | 224 |
MsG0880043795.01.T01 | MTR_5g075370 | 40.488 | 410 | 177 | 18 | 9 | 382 | 2 | 380 | 3.88e-71 | 238 |
MsG0880043795.01.T01 | MTR_1g053510 | 38.915 | 424 | 193 | 14 | 10 | 395 | 6 | 401 | 2.00e-70 | 227 |
MsG0880043795.01.T01 | MTR_5g092850 | 39.141 | 419 | 181 | 16 | 17 | 396 | 15 | 398 | 2.53e-70 | 227 |
MsG0880043795.01.T01 | MTR_2g065840 | 36.139 | 404 | 227 | 10 | 7 | 397 | 1 | 386 | 3.19e-70 | 226 |
MsG0880043795.01.T01 | MTR_2g034700 | 40.576 | 382 | 192 | 13 | 9 | 383 | 4 | 357 | 4.62e-70 | 225 |
MsG0880043795.01.T01 | MTR_5g064700 | 41.099 | 382 | 167 | 17 | 57 | 397 | 1 | 365 | 2.07e-69 | 223 |
MsG0880043795.01.T01 | MTR_5g086590 | 50.000 | 238 | 109 | 5 | 148 | 382 | 6 | 236 | 2.78e-69 | 218 |
MsG0880043795.01.T01 | MTR_8g033140 | 38.208 | 424 | 180 | 14 | 12 | 387 | 13 | 402 | 5.60e-69 | 224 |
MsG0880043795.01.T01 | MTR_8g036970 | 39.730 | 370 | 147 | 13 | 22 | 382 | 2 | 304 | 1.73e-68 | 221 |
MsG0880043795.01.T01 | MTR_5g091140 | 38.971 | 408 | 176 | 16 | 3 | 381 | 33 | 396 | 4.04e-67 | 219 |
MsG0880043795.01.T01 | MTR_8g467670 | 36.316 | 380 | 195 | 13 | 17 | 382 | 13 | 359 | 4.72e-67 | 218 |
MsG0880043795.01.T01 | MTR_4g014370 | 36.215 | 428 | 201 | 14 | 13 | 396 | 6 | 405 | 5.21e-67 | 218 |
MsG0880043795.01.T01 | MTR_8g033090 | 37.296 | 429 | 187 | 11 | 15 | 394 | 11 | 406 | 7.76e-67 | 218 |
MsG0880043795.01.T01 | MTR_8g046220 | 37.209 | 430 | 177 | 18 | 17 | 396 | 16 | 402 | 3.13e-66 | 216 |
MsG0880043795.01.T01 | MTR_8g064890 | 38.015 | 413 | 206 | 15 | 7 | 397 | 1 | 385 | 1.20e-65 | 214 |
MsG0880043795.01.T01 | MTR_7g016930 | 42.216 | 334 | 144 | 11 | 11 | 333 | 9 | 304 | 1.98e-65 | 212 |
MsG0880043795.01.T01 | MTR_1g007430 | 41.643 | 353 | 150 | 13 | 29 | 360 | 7 | 324 | 3.98e-64 | 208 |
MsG0880043795.01.T01 | MTR_8g063330 | 36.702 | 376 | 185 | 13 | 7 | 357 | 1 | 348 | 1.56e-63 | 211 |
MsG0880043795.01.T01 | MTR_8g033110 | 37.882 | 425 | 193 | 15 | 15 | 394 | 11 | 409 | 5.89e-63 | 208 |
MsG0880043795.01.T01 | MTR_8g032980 | 35.535 | 439 | 200 | 14 | 12 | 397 | 10 | 418 | 8.29e-63 | 207 |
MsG0880043795.01.T01 | MTR_6g078010 | 40.220 | 363 | 162 | 13 | 55 | 395 | 1 | 330 | 1.18e-62 | 205 |
MsG0880043795.01.T01 | MTR_8g041440 | 78.788 | 132 | 11 | 2 | 2 | 133 | 1 | 115 | 3.87e-62 | 196 |
MsG0880043795.01.T01 | MTR_5g097820 | 43.525 | 278 | 131 | 10 | 4 | 270 | 7 | 269 | 1.05e-61 | 200 |
MsG0880043795.01.T01 | MTR_5g092860 | 38.095 | 378 | 153 | 14 | 36 | 379 | 20 | 350 | 2.06e-61 | 202 |
MsG0880043795.01.T01 | MTR_5g074800 | 37.845 | 362 | 167 | 12 | 57 | 389 | 1 | 333 | 4.05e-59 | 196 |
MsG0880043795.01.T01 | MTR_6g079790 | 39.535 | 301 | 147 | 10 | 127 | 397 | 11 | 306 | 9.16e-59 | 194 |
MsG0880043795.01.T01 | MTR_4g007940 | 37.429 | 350 | 169 | 11 | 68 | 390 | 4 | 330 | 4.52e-58 | 193 |
MsG0880043795.01.T01 | MTR_1g098180 | 33.824 | 408 | 193 | 11 | 11 | 397 | 12 | 363 | 4.93e-58 | 194 |
MsG0880043795.01.T01 | MTR_7g104710 | 39.458 | 332 | 139 | 10 | 2 | 317 | 1 | 286 | 8.65e-57 | 189 |
MsG0880043795.01.T01 | MTR_8g018110 | 34.615 | 416 | 201 | 12 | 15 | 394 | 11 | 391 | 2.91e-56 | 190 |
MsG0880043795.01.T01 | MTR_8g064790 | 35.980 | 403 | 177 | 15 | 7 | 397 | 1 | 334 | 1.28e-55 | 186 |
MsG0880043795.01.T01 | MTR_1g050308 | 35.236 | 403 | 168 | 14 | 7 | 397 | 23 | 344 | 3.58e-55 | 186 |
MsG0880043795.01.T01 | MTR_8g063370 | 35.038 | 391 | 200 | 15 | 22 | 392 | 28 | 384 | 1.29e-54 | 186 |
MsG0880043795.01.T01 | MTR_5g022850 | 35.407 | 418 | 171 | 18 | 7 | 397 | 5 | 350 | 1.84e-54 | 184 |
MsG0880043795.01.T01 | MTR_6g087620 | 36.646 | 322 | 141 | 11 | 87 | 389 | 1 | 278 | 1.88e-54 | 181 |
MsG0880043795.01.T01 | MTR_5g043605 | 34.177 | 395 | 170 | 14 | 14 | 397 | 21 | 336 | 3.26e-53 | 181 |
MsG0880043795.01.T01 | MTR_7g023800 | 37.971 | 345 | 147 | 12 | 57 | 385 | 1 | 294 | 9.97e-52 | 175 |
MsG0880043795.01.T01 | MTR_8g063350 | 33.249 | 397 | 183 | 17 | 9 | 389 | 5 | 335 | 1.26e-50 | 174 |
MsG0880043795.01.T01 | MTR_6g090260 | 44.724 | 199 | 99 | 4 | 207 | 395 | 62 | 259 | 5.05e-47 | 162 |
MsG0880043795.01.T01 | MTR_6g090260 | 58.730 | 63 | 25 | 1 | 6 | 67 | 7 | 69 | 1.61e-13 | 70.5 |
MsG0880043795.01.T01 | MTR_1g076810 | 39.847 | 261 | 127 | 7 | 1 | 251 | 1 | 241 | 1.07e-45 | 167 |
MsG0880043795.01.T01 | MTR_5g076490 | 37.203 | 379 | 156 | 16 | 55 | 397 | 1 | 333 | 2.18e-45 | 159 |
MsG0880043795.01.T01 | MTR_5g023970 | 45.946 | 185 | 91 | 5 | 219 | 396 | 10 | 192 | 7.52e-45 | 154 |
MsG0880043795.01.T01 | MTR_2g021920 | 42.553 | 235 | 111 | 6 | 186 | 396 | 35 | 269 | 8.00e-45 | 156 |
MsG0880043795.01.T01 | MTR_6g004450 | 41.322 | 242 | 112 | 9 | 178 | 396 | 31 | 265 | 1.39e-44 | 155 |
MsG0880043795.01.T01 | MTR_5g037190 | 35.484 | 279 | 122 | 9 | 13 | 272 | 11 | 250 | 2.93e-42 | 149 |
MsG0880043795.01.T01 | MTR_1g050312 | 35.000 | 320 | 146 | 12 | 84 | 390 | 13 | 283 | 3.82e-42 | 150 |
MsG0880043795.01.T01 | MTR_6g070880 | 38.189 | 254 | 113 | 9 | 13 | 242 | 27 | 260 | 6.67e-41 | 145 |
MsG0880043795.01.T01 | MTR_6g071420 | 38.189 | 254 | 113 | 9 | 13 | 242 | 27 | 260 | 6.67e-41 | 145 |
MsG0880043795.01.T01 | MTR_5g068490 | 36.170 | 282 | 152 | 11 | 121 | 397 | 16 | 274 | 1.04e-40 | 145 |
MsG0880043795.01.T01 | MTR_5g096920 | 53.642 | 151 | 65 | 3 | 250 | 397 | 1 | 149 | 1.14e-40 | 141 |
MsG0880043795.01.T01 | MTR_8g063310 | 31.282 | 390 | 217 | 15 | 13 | 381 | 17 | 376 | 1.49e-40 | 149 |
MsG0880043795.01.T01 | MTR_5g066420 | 51.678 | 149 | 63 | 3 | 250 | 389 | 1 | 149 | 1.64e-40 | 141 |
MsG0880043795.01.T01 | MTR_8g033000 | 30.867 | 392 | 190 | 10 | 55 | 397 | 1 | 360 | 1.96e-40 | 147 |
MsG0880043795.01.T01 | MTR_8g041490 | 61.364 | 132 | 25 | 4 | 2 | 133 | 1 | 106 | 2.53e-40 | 139 |
MsG0880043795.01.T01 | MTR_5g097540 | 53.846 | 143 | 60 | 4 | 219 | 360 | 96 | 233 | 3.94e-39 | 142 |
MsG0880043795.01.T01 | MTR_5g094350 | 35.535 | 318 | 128 | 13 | 5 | 287 | 1 | 276 | 2.05e-37 | 137 |
MsG0880043795.01.T01 | MTR_2g104260 | 37.113 | 291 | 136 | 11 | 13 | 278 | 9 | 277 | 1.60e-36 | 134 |
MsG0880043795.01.T01 | MTR_3g018750 | 38.750 | 240 | 105 | 9 | 191 | 396 | 6 | 237 | 2.25e-36 | 133 |
MsG0880043795.01.T01 | MTR_5g091150 | 41.256 | 223 | 82 | 10 | 99 | 310 | 2 | 186 | 5.93e-36 | 130 |
MsG0880043795.01.T01 | MTR_6g079730 | 52.273 | 132 | 61 | 1 | 266 | 395 | 14 | 145 | 2.86e-35 | 127 |
MsG0880043795.01.T01 | MTR_6g465360 | 41.121 | 214 | 91 | 8 | 7 | 206 | 51 | 243 | 1.29e-34 | 130 |
MsG0880043795.01.T01 | MTR_5g097650 | 43.169 | 183 | 73 | 5 | 1 | 179 | 1 | 156 | 5.12e-34 | 124 |
MsG0880043795.01.T01 | MTR_8g035690 | 34.657 | 277 | 135 | 10 | 161 | 397 | 30 | 300 | 7.30e-34 | 128 |
MsG0880043795.01.T01 | MTR_6g009350 | 42.932 | 191 | 85 | 9 | 191 | 364 | 11 | 194 | 3.03e-32 | 120 |
MsG0880043795.01.T01 | MTR_4g016000 | 37.561 | 205 | 98 | 7 | 160 | 351 | 2 | 189 | 9.34e-32 | 120 |
MsG0880043795.01.T01 | MTR_5g096070 | 45.312 | 192 | 60 | 8 | 5 | 196 | 13 | 159 | 5.66e-31 | 116 |
MsG0880043795.01.T01 | MTR_5g098950 | 36.019 | 211 | 102 | 4 | 157 | 360 | 90 | 274 | 1.62e-30 | 118 |
MsG0880043795.01.T01 | MTR_7g017120 | 42.442 | 172 | 93 | 3 | 211 | 378 | 72 | 241 | 6.63e-30 | 116 |
MsG0880043795.01.T01 | MTR_7g017150 | 42.442 | 172 | 93 | 3 | 211 | 378 | 73 | 242 | 7.06e-30 | 116 |
MsG0880043795.01.T01 | MTR_4g014370 | 38.462 | 195 | 105 | 5 | 211 | 396 | 145 | 333 | 7.53e-30 | 118 |
MsG0880043795.01.T01 | MTR_4g014370 | 40.000 | 140 | 59 | 4 | 13 | 146 | 17 | 137 | 6.80e-20 | 90.1 |
MsG0880043795.01.T01 | MTR_5g097660 | 54.717 | 106 | 45 | 2 | 294 | 396 | 11 | 116 | 1.02e-28 | 108 |
MsG0880043795.01.T01 | MTR_7g019250 | 34.081 | 223 | 120 | 6 | 169 | 379 | 206 | 413 | 1.07e-28 | 117 |
MsG0880043795.01.T01 | MTR_8g073570 | 37.245 | 196 | 90 | 8 | 10 | 199 | 2 | 170 | 4.61e-28 | 108 |
MsG0880043795.01.T01 | MTR_2g022020 | 49.495 | 99 | 50 | 0 | 298 | 396 | 18 | 116 | 5.03e-27 | 104 |
MsG0880043795.01.T01 | MTR_3g030620 | 39.264 | 163 | 88 | 4 | 245 | 397 | 18 | 179 | 5.14e-27 | 106 |
MsG0880043795.01.T01 | MTR_5g049560 | 43.038 | 158 | 70 | 3 | 55 | 203 | 1 | 147 | 9.81e-27 | 108 |
MsG0880043795.01.T01 | MTR_5g086780 | 51.887 | 106 | 51 | 0 | 273 | 378 | 123 | 228 | 1.31e-26 | 106 |
MsG0880043795.01.T01 | MTR_5g096050 | 56.481 | 108 | 34 | 2 | 250 | 344 | 1 | 108 | 2.70e-25 | 99.8 |
MsG0880043795.01.T01 | MTR_5g036250 | 52.874 | 87 | 41 | 0 | 298 | 384 | 8 | 94 | 1.62e-24 | 99.8 |
MsG0880043795.01.T01 | MTR_3g047580 | 34.545 | 165 | 68 | 4 | 7 | 169 | 1 | 127 | 6.58e-24 | 96.3 |
MsG0880043795.01.T01 | MTR_1g047080 | 29.972 | 357 | 159 | 15 | 55 | 397 | 1 | 280 | 2.14e-23 | 99.4 |
MsG0880043795.01.T01 | MTR_7g101200 | 33.333 | 225 | 113 | 13 | 153 | 364 | 36 | 236 | 1.06e-21 | 93.6 |
MsG0880043795.01.T01 | MTR_1g115205 | 33.818 | 275 | 106 | 13 | 2 | 256 | 17 | 235 | 1.32e-21 | 93.6 |
MsG0880043795.01.T01 | MTR_1g097560 | 24.485 | 388 | 237 | 16 | 15 | 394 | 33 | 372 | 5.79e-20 | 90.9 |
MsG0880043795.01.T01 | MTR_2g461450 | 24.938 | 401 | 220 | 16 | 5 | 377 | 6 | 353 | 4.19e-18 | 85.5 |
MsG0880043795.01.T01 | MTR_4g061340 | 25.000 | 372 | 208 | 13 | 18 | 362 | 26 | 353 | 1.54e-17 | 84.0 |
MsG0880043795.01.T01 | MTR_4g094400 | 40.000 | 130 | 51 | 4 | 247 | 360 | 7 | 125 | 1.78e-17 | 78.6 |
MsG0880043795.01.T01 | MTR_1g097490 | 25.000 | 376 | 233 | 16 | 6 | 375 | 37 | 369 | 3.99e-17 | 82.8 |
MsG0880043795.01.T01 | MTR_4g019990 | 24.501 | 351 | 202 | 14 | 14 | 337 | 2 | 316 | 4.00e-17 | 82.8 |
MsG0880043795.01.T01 | MTR_2g021150 | 25.284 | 352 | 215 | 14 | 18 | 357 | 14 | 329 | 4.44e-17 | 82.4 |
MsG0880043795.01.T01 | MTR_2g028130 | 22.410 | 415 | 261 | 17 | 14 | 395 | 1 | 387 | 5.40e-17 | 82.4 |
MsG0880043795.01.T01 | MTR_3g013740 | 24.060 | 399 | 234 | 15 | 11 | 391 | 37 | 384 | 1.42e-16 | 81.3 |
MsG0880043795.01.T01 | MTR_2g028140 | 24.501 | 351 | 208 | 12 | 14 | 337 | 1 | 321 | 2.30e-16 | 80.9 |
MsG0880043795.01.T01 | MTR_3g083010 | 23.864 | 352 | 223 | 13 | 18 | 349 | 6 | 332 | 2.58e-16 | 80.5 |
MsG0880043795.01.T01 | MTR_5g022420 | 23.656 | 372 | 214 | 17 | 18 | 372 | 27 | 345 | 2.70e-16 | 80.1 |
MsG0880043795.01.T01 | MTR_4g107820 | 23.760 | 383 | 229 | 18 | 4 | 370 | 22 | 357 | 2.79e-16 | 80.1 |
MsG0880043795.01.T01 | MTR_4g107780 | 23.760 | 383 | 229 | 18 | 4 | 370 | 22 | 357 | 2.79e-16 | 80.1 |
MsG0880043795.01.T01 | MTR_4g107820 | 23.760 | 383 | 229 | 18 | 4 | 370 | 22 | 357 | 3.13e-16 | 80.1 |
MsG0880043795.01.T01 | MTR_6g016285 | 24.221 | 417 | 223 | 17 | 18 | 379 | 21 | 399 | 3.21e-16 | 80.5 |
MsG0880043795.01.T01 | MTR_4g107780 | 23.760 | 383 | 229 | 18 | 4 | 370 | 22 | 357 | 3.55e-16 | 80.1 |
MsG0880043795.01.T01 | MTR_4g024890 | 23.442 | 337 | 204 | 10 | 19 | 338 | 11 | 310 | 3.64e-16 | 79.7 |
MsG0880043795.01.T01 | MTR_1g094210 | 24.060 | 399 | 225 | 17 | 8 | 383 | 47 | 390 | 4.79e-16 | 79.7 |
MsG0880043795.01.T01 | MTR_2g021050 | 23.097 | 381 | 227 | 15 | 14 | 377 | 1 | 332 | 5.21e-16 | 79.3 |
MsG0880043795.01.T01 | MTR_3g007430 | 25.439 | 342 | 203 | 13 | 26 | 358 | 51 | 349 | 6.10e-16 | 79.3 |
MsG0880043795.01.T01 | MTR_1g037540 | 26.667 | 345 | 200 | 14 | 21 | 335 | 8 | 329 | 6.90e-16 | 79.3 |
MsG0880043795.01.T01 | MTR_3g007360 | 27.301 | 326 | 176 | 17 | 26 | 337 | 60 | 338 | 9.81e-16 | 78.6 |
MsG0880043795.01.T01 | MTR_2g028160 | 25.072 | 347 | 207 | 14 | 14 | 337 | 1 | 317 | 1.64e-15 | 78.2 |
MsG0880043795.01.T01 | MTR_1g094210 | 24.409 | 381 | 221 | 16 | 8 | 373 | 47 | 375 | 1.91e-15 | 77.8 |
MsG0880043795.01.T01 | MTR_3g019290 | 30.000 | 230 | 89 | 6 | 12 | 227 | 8 | 179 | 2.07e-15 | 74.3 |
MsG0880043795.01.T01 | MTR_3g007410 | 27.301 | 326 | 176 | 17 | 26 | 337 | 60 | 338 | 3.17e-15 | 77.0 |
MsG0880043795.01.T01 | MTR_0667s0010 | 23.324 | 343 | 202 | 12 | 14 | 335 | 2 | 304 | 4.79e-15 | 76.6 |
MsG0880043795.01.T01 | MTR_4g023080 | 22.938 | 388 | 243 | 14 | 17 | 396 | 8 | 347 | 6.14e-15 | 75.9 |
MsG0880043795.01.T01 | MTR_3g014540 | 23.416 | 363 | 210 | 15 | 18 | 364 | 29 | 339 | 6.83e-15 | 75.9 |
MsG0880043795.01.T01 | MTR_3g097190 | 59.259 | 54 | 22 | 0 | 322 | 375 | 28 | 81 | 7.81e-15 | 72.8 |
MsG0880043795.01.T01 | MTR_2g031720 | 22.222 | 378 | 238 | 14 | 18 | 377 | 6 | 345 | 8.85e-15 | 75.9 |
MsG0880043795.01.T01 | MTR_3g009310 | 23.580 | 352 | 221 | 9 | 18 | 364 | 42 | 350 | 9.29e-15 | 75.9 |
MsG0880043795.01.T01 | MTR_2g046900 | 24.444 | 360 | 215 | 16 | 18 | 358 | 28 | 349 | 1.26e-14 | 75.1 |
MsG0880043795.01.T01 | MTR_2g426060 | 23.833 | 407 | 245 | 18 | 18 | 395 | 6 | 376 | 1.28e-14 | 75.5 |
MsG0880043795.01.T01 | MTR_7g028660 | 23.753 | 421 | 227 | 18 | 18 | 396 | 11 | 379 | 1.46e-14 | 75.1 |
MsG0880043795.01.T01 | MTR_7g056710 | 25.731 | 342 | 187 | 15 | 15 | 338 | 20 | 312 | 2.11e-14 | 74.7 |
MsG0880043795.01.T01 | MTR_2g046920 | 24.438 | 356 | 212 | 16 | 18 | 358 | 24 | 337 | 3.27e-14 | 73.9 |
MsG0880043795.01.T01 | MTR_4g030830 | 24.500 | 400 | 230 | 16 | 18 | 379 | 9 | 374 | 3.90e-14 | 73.9 |
MsG0880043795.01.T01 | MTR_8g101580 | 25.281 | 356 | 186 | 17 | 26 | 357 | 54 | 353 | 4.39e-14 | 73.6 |
MsG0880043795.01.T01 | MTR_1g442850 | 26.331 | 338 | 184 | 15 | 26 | 340 | 13 | 308 | 5.47e-14 | 73.2 |
MsG0880043795.01.T01 | MTR_6g087660 | 49.383 | 81 | 38 | 2 | 2 | 79 | 1 | 81 | 5.59e-14 | 70.5 |
MsG0880043795.01.T01 | MTR_1g068875 | 23.885 | 381 | 221 | 18 | 18 | 377 | 4 | 336 | 5.98e-14 | 73.2 |
MsG0880043795.01.T01 | MTR_3g036290 | 24.090 | 357 | 187 | 15 | 18 | 356 | 22 | 312 | 7.64e-14 | 72.8 |
MsG0880043795.01.T01 | MTR_2g426070 | 21.340 | 403 | 259 | 16 | 19 | 395 | 7 | 377 | 9.69e-14 | 72.8 |
MsG0880043795.01.T01 | MTR_4g070550 | 24.277 | 346 | 209 | 13 | 14 | 337 | 1 | 315 | 1.23e-13 | 72.4 |
MsG0880043795.01.T01 | MTR_1g009110 | 24.409 | 381 | 206 | 17 | 15 | 364 | 11 | 340 | 1.51e-13 | 72.0 |
MsG0880043795.01.T01 | MTR_2g047832 | 23.324 | 373 | 215 | 15 | 18 | 358 | 29 | 362 | 1.61e-13 | 72.0 |
MsG0880043795.01.T01 | MTR_1g050305 | 48.193 | 83 | 38 | 2 | 303 | 380 | 21 | 103 | 1.80e-13 | 67.8 |
MsG0880043795.01.T01 | MTR_3g007300 | 22.630 | 327 | 181 | 11 | 18 | 341 | 49 | 306 | 3.12e-13 | 70.9 |
MsG0880043795.01.T01 | MTR_2g426020 | 22.705 | 414 | 249 | 17 | 14 | 395 | 2 | 376 | 4.45e-13 | 70.5 |
MsG0880043795.01.T01 | MTR_5g049520 | 71.429 | 42 | 12 | 0 | 342 | 383 | 22 | 63 | 5.90e-13 | 67.0 |
MsG0880043795.01.T01 | MTR_2g025420 | 21.963 | 428 | 241 | 18 | 18 | 394 | 6 | 391 | 9.35e-13 | 69.7 |
MsG0880043795.01.T01 | MTR_3g006670 | 24.929 | 353 | 203 | 14 | 6 | 342 | 37 | 343 | 1.34e-12 | 69.3 |
MsG0880043795.01.T01 | MTR_3g047540 | 46.970 | 66 | 33 | 2 | 218 | 282 | 4 | 68 | 1.61e-12 | 63.5 |
MsG0880043795.01.T01 | MTR_2g031680 | 22.715 | 383 | 231 | 13 | 14 | 377 | 2 | 338 | 1.82e-12 | 68.6 |
MsG0880043795.01.T01 | MTR_1g068860 | 23.238 | 383 | 224 | 16 | 18 | 377 | 4 | 339 | 1.89e-12 | 68.6 |
MsG0880043795.01.T01 | MTR_4g109270 | 23.940 | 401 | 232 | 21 | 18 | 396 | 8 | 357 | 2.84e-12 | 67.8 |
MsG0880043795.01.T01 | MTR_2g425980 | 21.739 | 414 | 254 | 17 | 14 | 395 | 1 | 376 | 3.19e-12 | 68.2 |
MsG0880043795.01.T01 | MTR_4g094365 | 22.011 | 368 | 238 | 10 | 17 | 375 | 7 | 334 | 3.57e-12 | 67.8 |
MsG0880043795.01.T01 | MTR_4g109280 | 24.929 | 353 | 204 | 16 | 16 | 356 | 6 | 309 | 5.01e-12 | 67.0 |
MsG0880043795.01.T01 | MTR_4g031020 | 24.044 | 366 | 205 | 15 | 18 | 337 | 15 | 353 | 5.06e-12 | 67.4 |
MsG0880043795.01.T01 | MTR_8g467140 | 25.826 | 333 | 187 | 16 | 18 | 337 | 32 | 317 | 6.29e-12 | 66.6 |
MsG0880043795.01.T01 | MTR_1g022200 | 24.351 | 308 | 168 | 11 | 21 | 308 | 18 | 280 | 6.57e-12 | 67.0 |
MsG0880043795.01.T01 | MTR_8g433040 | 22.021 | 386 | 250 | 12 | 17 | 396 | 17 | 357 | 7.31e-12 | 66.6 |
MsG0880043795.01.T01 | MTR_8g032380 | 22.021 | 386 | 250 | 12 | 17 | 396 | 17 | 357 | 7.31e-12 | 66.6 |
MsG0880043795.01.T01 | MTR_1g055135 | 23.631 | 347 | 210 | 16 | 6 | 338 | 1 | 306 | 1.17e-11 | 66.2 |
MsG0880043795.01.T01 | MTR_4g023070 | 21.782 | 404 | 248 | 15 | 18 | 396 | 3 | 363 | 1.59e-11 | 65.9 |
MsG0880043795.01.T01 | MTR_4g023120 | 21.287 | 404 | 250 | 15 | 18 | 396 | 3 | 363 | 3.03e-11 | 64.7 |
MsG0880043795.01.T01 | MTR_3g013770 | 22.376 | 362 | 219 | 15 | 18 | 364 | 33 | 347 | 3.40e-11 | 64.7 |
MsG0880043795.01.T01 | MTR_8g099460 | 23.210 | 405 | 241 | 16 | 18 | 395 | 5 | 366 | 4.30e-11 | 64.7 |
MsG0880043795.01.T01 | MTR_2g426090 | 21.320 | 394 | 253 | 16 | 26 | 395 | 14 | 374 | 4.92e-11 | 64.3 |
MsG0880043795.01.T01 | MTR_5g097730 | 63.889 | 36 | 13 | 0 | 327 | 362 | 18 | 53 | 7.07e-11 | 57.8 |
MsG0880043795.01.T01 | MTR_5g070088 | 22.741 | 343 | 221 | 10 | 12 | 338 | 1 | 315 | 7.40e-11 | 63.5 |
MsG0880043795.01.T01 | MTR_5g057790 | 23.582 | 335 | 199 | 11 | 18 | 341 | 46 | 334 | 7.60e-11 | 63.5 |
MsG0880043795.01.T01 | MTR_4g023130 | 23.622 | 254 | 167 | 10 | 151 | 396 | 72 | 306 | 7.77e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043795.01.T01 | AT3G06240 | 24.156 | 385 | 248 | 14 | 18 | 379 | 36 | 399 | 4.28e-18 | 85.9 |
MsG0880043795.01.T01 | AT2G40925 | 24.458 | 323 | 193 | 10 | 17 | 332 | 26 | 304 | 8.44e-15 | 75.9 |
MsG0880043795.01.T01 | AT4G12560 | 21.649 | 388 | 240 | 11 | 18 | 380 | 4 | 352 | 4.00e-14 | 73.9 |
MsG0880043795.01.T01 | AT4G12560 | 21.649 | 388 | 240 | 11 | 18 | 380 | 4 | 352 | 4.00e-14 | 73.9 |
MsG0880043795.01.T01 | AT4G12560 | 21.649 | 388 | 240 | 11 | 18 | 380 | 4 | 352 | 4.00e-14 | 73.9 |
MsG0880043795.01.T01 | AT4G22390 | 24.773 | 331 | 187 | 17 | 84 | 383 | 53 | 352 | 8.24e-14 | 72.8 |
MsG0880043795.01.T01 | AT4G22390 | 24.773 | 331 | 187 | 17 | 84 | 383 | 53 | 352 | 9.74e-14 | 72.8 |
Find 83 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCACTCAAGTGTTTCATTC+TGG | 0.152822 | 8:+30787046 | MsG0880043795.01.T01:CDS |
CTTGATGTCTTGTCAAATTT+AGG | 0.196637 | 8:-30786636 | None:intergenic |
TACGTATCACATTTCAATTT+TGG | 0.201469 | 8:+30787353 | MsG0880043795.01.T01:CDS |
ATCAAATCTTTGAAACGATT+TGG | 0.245964 | 8:+30786502 | MsG0880043795.01.T01:CDS |
CGGCGTTAAAGATGACTTTA+AGG | 0.268606 | 8:+30786987 | MsG0880043795.01.T01:CDS |
TTGGAAGAATGCTTTCTATA+TGG | 0.275419 | 8:-30787572 | None:intergenic |
TTGGGTTCAGCGAGTGTTAA+TGG | 0.278744 | 8:+30786811 | MsG0880043795.01.T01:CDS |
TGTCTGCATTCTTACTACTA+TGG | 0.304029 | 8:+30786841 | MsG0880043795.01.T01:CDS |
CATGTACACTTCTTCGGTTC+CGG | 0.319481 | 8:-30787136 | None:intergenic |
GCTTTCTATATGGAATAGTA+TGG | 0.339312 | 8:-30787562 | None:intergenic |
TAACTATATCTTCATCCAAT+TGG | 0.352415 | 8:-30787591 | None:intergenic |
TTGCTAACCTCAACATTTGT+TGG | 0.356942 | 8:-30786433 | None:intergenic |
AATCACATTAATTATCTTGT+TGG | 0.357776 | 8:+30786958 | MsG0880043795.01.T01:CDS |
CTGTCATCCCCATCCACTTT+CGG | 0.363067 | 8:-30786718 | None:intergenic |
CCATTCTTCCCCGCTCCAAT+AGG | 0.369046 | 8:-30787444 | None:intergenic |
TCACTCAAGTGTTTCATTCT+GGG | 0.369909 | 8:+30787047 | MsG0880043795.01.T01:CDS |
TCATCATTGTCCTCTTGAAT+AGG | 0.370128 | 8:-30786745 | None:intergenic |
AGAATAGAGTTAAATTAGAT+TGG | 0.374938 | 8:+30786695 | MsG0880043795.01.T01:CDS |
CCTTGCCTCGAGAATCCTAT+TGG | 0.387856 | 8:+30787429 | MsG0880043795.01.T01:CDS |
ATAGAAAGCATTCTTCCAAT+TGG | 0.400066 | 8:+30787576 | MsG0880043795.01.T01:CDS |
TGATTGAGGAGATTGGTGTT+AGG | 0.405378 | 8:+30787526 | MsG0880043795.01.T01:CDS |
CCTATTGGAGCGGGGAAGAA+TGG | 0.447612 | 8:+30787444 | MsG0880043795.01.T01:CDS |
TGATGAGGTGCACAGAAATC+AGG | 0.448674 | 8:-30786925 | None:intergenic |
GATTGAGGAGATTGGTGTTA+GGG | 0.448819 | 8:+30787527 | MsG0880043795.01.T01:CDS |
AGAAACTTAATGATATTGAA+TGG | 0.450606 | 8:+30787294 | MsG0880043795.01.T01:CDS |
CCCATCCATGTACACTTCTT+CGG | 0.452346 | 8:-30787142 | None:intergenic |
AAGATGACTTTAAGGTGATT+CGG | 0.455262 | 8:+30786995 | MsG0880043795.01.T01:CDS |
AATTATCTTGTTGGTTATGA+CGG | 0.465428 | 8:+30786967 | MsG0880043795.01.T01:CDS |
GTCTTGAGTTCGTTGGTAGT+TGG | 0.470237 | 8:-30786889 | None:intergenic |
CTCGAGAATCCTATTGGAGC+GGG | 0.472112 | 8:+30787435 | MsG0880043795.01.T01:CDS |
AACATAAAAGGCAATATCAT+CGG | 0.476006 | 8:-30786464 | None:intergenic |
AGTCCATGATTCTATTACAC+CGG | 0.476515 | 8:-30787382 | None:intergenic |
TAAATTAGATTGGCCGAAAG+TGG | 0.480356 | 8:+30786705 | MsG0880043795.01.T01:CDS |
CTTAAGTACCAGGATGATTG+AGG | 0.491773 | 8:+30787512 | MsG0880043795.01.T01:CDS |
TCGGTTCCGGTATAAGTTGG+AGG | 0.493954 | 8:-30787123 | None:intergenic |
GCATCCTCATCCAAGTCATA+TGG | 0.500838 | 8:-30786772 | None:intergenic |
ACATGGATGGGATGTCTCAT+TGG | 0.501025 | 8:+30787154 | MsG0880043795.01.T01:CDS |
TCTTCGGTTCCGGTATAAGT+TGG | 0.502191 | 8:-30787126 | None:intergenic |
GAAACTTAATGATATTGAAT+GGG | 0.506187 | 8:+30787295 | MsG0880043795.01.T01:CDS |
ACCAGGATGATTGAGGAGAT+TGG | 0.516311 | 8:+30787519 | MsG0880043795.01.T01:CDS |
CATATGCCTCCAACTTATAC+CGG | 0.516876 | 8:+30787117 | MsG0880043795.01.T01:CDS |
ACATAAAAGGCAATATCATC+GGG | 0.521227 | 8:-30786463 | None:intergenic |
CTTGAGTGAGGATCATCAAA+TGG | 0.523089 | 8:-30787033 | None:intergenic |
ACCGAAGAAGTGTACATGGA+TGG | 0.531564 | 8:+30787141 | MsG0880043795.01.T01:CDS |
GACTTGGATGAGGATGCCTC+TGG | 0.531752 | 8:+30786778 | MsG0880043795.01.T01:CDS |
CCAATAGGATTCTCGAGGCA+AGG | 0.544081 | 8:-30787429 | None:intergenic |
TAGATTGGCCGAAAGTGGAT+GGG | 0.544609 | 8:+30786710 | MsG0880043795.01.T01:CDS |
ACCAATCTCCTCAATCATCC+TGG | 0.548178 | 8:-30787520 | None:intergenic |
ATACCCTCTGACATTGATGA+TGG | 0.548910 | 8:+30787249 | MsG0880043795.01.T01:CDS |
CGGAACCGAAGAAGTGTACA+TGG | 0.549565 | 8:+30787137 | MsG0880043795.01.T01:CDS |
TTAGATTGGCCGAAAGTGGA+TGG | 0.552092 | 8:+30786709 | MsG0880043795.01.T01:CDS |
AACCCGGTGTAATAGAATCA+TGG | 0.552557 | 8:+30787379 | MsG0880043795.01.T01:CDS |
GGATGGGATGTCTCATTGGT+TGG | 0.554386 | 8:+30787158 | MsG0880043795.01.T01:CDS |
ACATATCATGATAATAAGAA+TGG | 0.556921 | 8:-30786606 | None:intergenic |
GTTGGTTTAACTTAAGTACC+AGG | 0.563145 | 8:+30787502 | MsG0880043795.01.T01:CDS |
CCGAAGAAGTGTACATGGAT+GGG | 0.564788 | 8:+30787142 | MsG0880043795.01.T01:CDS |
CAATAGGATTCTCGAGGCAA+GGG | 0.565293 | 8:-30787428 | None:intergenic |
TCCTCATCCAAGTCATATGG+TGG | 0.572768 | 8:-30786769 | None:intergenic |
GCACAGAAATCAGGAATGGA+AGG | 0.575408 | 8:-30786916 | None:intergenic |
AGATTGGCCGAAAGTGGATG+GGG | 0.582120 | 8:+30786711 | MsG0880043795.01.T01:CDS |
AGGAATTGTCTTGAGTTCGT+TGG | 0.582842 | 8:-30786896 | None:intergenic |
TTGGATGTGCACGTAAGTCA+TGG | 0.591680 | 8:+30786521 | MsG0880043795.01.T01:CDS |
CCGCAATAACTTCTTATCAA+AGG | 0.593540 | 8:+30786582 | MsG0880043795.01.T01:CDS |
GTCCATGATTCTATTACACC+GGG | 0.594208 | 8:-30787381 | None:intergenic |
AGGTGCACAGAAATCAGGAA+TGG | 0.597979 | 8:-30786920 | None:intergenic |
AGGATTCTCGAGGCAAGGGA+AGG | 0.600511 | 8:-30787424 | None:intergenic |
TGATGACCCACCATATGACT+TGG | 0.606090 | 8:+30786762 | MsG0880043795.01.T01:CDS |
AGAACCATCATCAATGTCAG+AGG | 0.618203 | 8:-30787253 | None:intergenic |
GAATTGAGAAACTTACCTTG+TGG | 0.631900 | 8:+30786863 | MsG0880043795.01.T01:CDS |
CCTCGAGAATCCTATTGGAG+CGG | 0.636650 | 8:+30787434 | MsG0880043795.01.T01:CDS |
GAACCATCATCAATGTCAGA+GGG | 0.639138 | 8:-30787252 | None:intergenic |
TGACAGACAACCTATTCAAG+AGG | 0.650373 | 8:+30786735 | MsG0880043795.01.T01:CDS |
ACCCAAAATTTCAAAACCAG+AGG | 0.655568 | 8:-30786794 | None:intergenic |
CCTCATCCAAGTCATATGGT+GGG | 0.655978 | 8:-30786768 | None:intergenic |
CCGCTCCAATAGGATTCTCG+AGG | 0.672391 | 8:-30787434 | None:intergenic |
GGTGCATAGTCATGAAATGT+CGG | 0.679434 | 8:-30786561 | None:intergenic |
CCTTTGATAAGAAGTTATTG+CGG | 0.679677 | 8:-30786582 | None:intergenic |
CAGAATGAAACACTTGAGTG+AGG | 0.680568 | 8:-30787045 | None:intergenic |
GTTGGTAGTTGGATTCCACA+AGG | 0.684960 | 8:-30786878 | None:intergenic |
TCGAGAATCCTATTGGAGCG+GGG | 0.686820 | 8:+30787436 | MsG0880043795.01.T01:CDS |
CCCACCATATGACTTGGATG+AGG | 0.690790 | 8:+30786768 | MsG0880043795.01.T01:CDS |
GATGACTCCAACAAATGTTG+AGG | 0.701281 | 8:+30786426 | MsG0880043795.01.T01:CDS |
TGATTAACATACGACTGATG+AGG | 0.722669 | 8:-30786940 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACTATTTAGAAAAAAAGA+CGG | + | Chr8:30787471-30787490 | MsG0880043795.01.T01:CDS | 15.0% |
!! | AATCACATTAATTATCTTGT+TGG | + | Chr8:30786958-30786977 | MsG0880043795.01.T01:CDS | 20.0% |
!! | ACATATCATGATAATAAGAA+TGG | - | Chr8:30786609-30786628 | None:intergenic | 20.0% |
!! | AGAAACTTAATGATATTGAA+TGG | + | Chr8:30787294-30787313 | MsG0880043795.01.T01:CDS | 20.0% |
!! | AGAATAGAGTTAAATTAGAT+TGG | + | Chr8:30786695-30786714 | MsG0880043795.01.T01:CDS | 20.0% |
!! | GAAACTTAATGATATTGAAT+GGG | + | Chr8:30787295-30787314 | MsG0880043795.01.T01:CDS | 20.0% |
!!! | CATGTTTTGTATTTACTTTT+TGG | + | Chr8:30786661-30786680 | MsG0880043795.01.T01:CDS | 20.0% |
!!! | GTTCTTATAATTTTTTGGTA+TGG | + | Chr8:30787271-30787290 | MsG0880043795.01.T01:CDS | 20.0% |
!!! | TGATGGTTCTTATAATTTTT+TGG | + | Chr8:30787266-30787285 | MsG0880043795.01.T01:CDS | 20.0% |
! | AACATAAAAGGCAATATCAT+CGG | - | Chr8:30786467-30786486 | None:intergenic | 25.0% |
!! | AATTATCTTGTTGGTTATGA+CGG | + | Chr8:30786967-30786986 | MsG0880043795.01.T01:CDS | 25.0% |
!! | ACGTATCACATTTCAATTTT+GGG | + | Chr8:30787354-30787373 | MsG0880043795.01.T01:CDS | 25.0% |
!! | TACGTATCACATTTCAATTT+TGG | + | Chr8:30787353-30787372 | MsG0880043795.01.T01:CDS | 25.0% |
!!! | AAGTTTTGACAGAACATAAA+AGG | - | Chr8:30786479-30786498 | None:intergenic | 25.0% |
!!! | ATCAAATCTTTGAAACGATT+TGG | + | Chr8:30786502-30786521 | MsG0880043795.01.T01:CDS | 25.0% |
!!! | TGTATTTACTTTTTGGTGAA+AGG | + | Chr8:30786668-30786687 | MsG0880043795.01.T01:CDS | 25.0% |
ACATAAAAGGCAATATCATC+GGG | - | Chr8:30786466-30786485 | None:intergenic | 30.0% | |
CCTTTGATAAGAAGTTATTG+CGG | - | Chr8:30786585-30786604 | None:intergenic | 30.0% | |
CTTGATGTCTTGTCAAATTT+AGG | - | Chr8:30786639-30786658 | None:intergenic | 30.0% | |
GCTTTCTATATGGAATAGTA+TGG | - | Chr8:30787565-30787584 | None:intergenic | 30.0% | |
TTGGAAGAATGCTTTCTATA+TGG | - | Chr8:30787575-30787594 | None:intergenic | 30.0% | |
!! | AAGATGACTTTAAGGTGATT+CGG | + | Chr8:30786995-30787014 | MsG0880043795.01.T01:CDS | 30.0% |
!! | ATAGAAAGCATTCTTCCAAT+TGG | + | Chr8:30787576-30787595 | MsG0880043795.01.T01:CDS | 30.0% |
AAAAAGACGGCGAAATATGT+TGG | + | Chr8:30787484-30787503 | MsG0880043795.01.T01:CDS | 35.0% | |
ACCCAAAATTTCAAAACCAG+AGG | - | Chr8:30786797-30786816 | None:intergenic | 35.0% | |
AGTCCATGATTCTATTACAC+CGG | - | Chr8:30787385-30787404 | None:intergenic | 35.0% | |
ATAGCCTACACAAAAACTCT+TGG | + | Chr8:30787076-30787095 | MsG0880043795.01.T01:CDS | 35.0% | |
CCGCAATAACTTCTTATCAA+AGG | + | Chr8:30786582-30786601 | MsG0880043795.01.T01:CDS | 35.0% | |
GAATTGAGAAACTTACCTTG+TGG | + | Chr8:30786863-30786882 | MsG0880043795.01.T01:CDS | 35.0% | |
TCACTCAAGTGTTTCATTCT+GGG | + | Chr8:30787047-30787066 | MsG0880043795.01.T01:CDS | 35.0% | |
TCATCATTGTCCTCTTGAAT+AGG | - | Chr8:30786748-30786767 | None:intergenic | 35.0% | |
TGATTAACATACGACTGATG+AGG | - | Chr8:30786943-30786962 | None:intergenic | 35.0% | |
TGTCTGCATTCTTACTACTA+TGG | + | Chr8:30786841-30786860 | MsG0880043795.01.T01:CDS | 35.0% | |
TTGCTAACCTCAACATTTGT+TGG | - | Chr8:30786436-30786455 | None:intergenic | 35.0% | |
! | GTTGGTTTAACTTAAGTACC+AGG | + | Chr8:30787502-30787521 | MsG0880043795.01.T01:CDS | 35.0% |
! | TAAATTAGATTGGCCGAAAG+TGG | + | Chr8:30786705-30786724 | MsG0880043795.01.T01:CDS | 35.0% |
! | TTCTCCAAGAGTTTTTGTGT+AGG | - | Chr8:30787083-30787102 | None:intergenic | 35.0% |
!! | ATTTCAATTTTGGGTGAACC+CGG | + | Chr8:30787363-30787382 | MsG0880043795.01.T01:CDS | 35.0% |
!!! | GCCTCTGGTTTTGAAATTTT+GGG | + | Chr8:30786793-30786812 | MsG0880043795.01.T01:CDS | 35.0% |
!!! | TGCCTCTGGTTTTGAAATTT+TGG | + | Chr8:30786792-30786811 | MsG0880043795.01.T01:CDS | 35.0% |
AACCCGGTGTAATAGAATCA+TGG | + | Chr8:30787379-30787398 | MsG0880043795.01.T01:CDS | 40.0% | |
AGAACCATCATCAATGTCAG+AGG | - | Chr8:30787256-30787275 | None:intergenic | 40.0% | |
AGGAATTGTCTTGAGTTCGT+TGG | - | Chr8:30786899-30786918 | None:intergenic | 40.0% | |
ATACCCTCTGACATTGATGA+TGG | + | Chr8:30787249-30787268 | MsG0880043795.01.T01:CDS | 40.0% | |
CAGAATGAAACACTTGAGTG+AGG | - | Chr8:30787048-30787067 | None:intergenic | 40.0% | |
CATATGCCTCCAACTTATAC+CGG | + | Chr8:30787117-30787136 | MsG0880043795.01.T01:CDS | 40.0% | |
CGGCGTTAAAGATGACTTTA+AGG | + | Chr8:30786987-30787006 | MsG0880043795.01.T01:CDS | 40.0% | |
CTCACTCAAGTGTTTCATTC+TGG | + | Chr8:30787046-30787065 | MsG0880043795.01.T01:CDS | 40.0% | |
CTTAAGTACCAGGATGATTG+AGG | + | Chr8:30787512-30787531 | MsG0880043795.01.T01:CDS | 40.0% | |
CTTGAGTGAGGATCATCAAA+TGG | - | Chr8:30787036-30787055 | None:intergenic | 40.0% | |
GAACCATCATCAATGTCAGA+GGG | - | Chr8:30787255-30787274 | None:intergenic | 40.0% | |
GATGACTCCAACAAATGTTG+AGG | + | Chr8:30786426-30786445 | MsG0880043795.01.T01:CDS | 40.0% | |
GGTGCATAGTCATGAAATGT+CGG | - | Chr8:30786564-30786583 | None:intergenic | 40.0% | |
GTCCATGATTCTATTACACC+GGG | - | Chr8:30787384-30787403 | None:intergenic | 40.0% | |
TGACAGACAACCTATTCAAG+AGG | + | Chr8:30786735-30786754 | MsG0880043795.01.T01:CDS | 40.0% | |
! | TGATTGAGGAGATTGGTGTT+AGG | + | Chr8:30787526-30787545 | MsG0880043795.01.T01:CDS | 40.0% |
!! | GATTGAGGAGATTGGTGTTA+GGG | + | Chr8:30787527-30787546 | MsG0880043795.01.T01:CDS | 40.0% |
ACATGGATGGGATGTCTCAT+TGG | + | Chr8:30787154-30787173 | MsG0880043795.01.T01:CDS | 45.0% | |
ACCAATCTCCTCAATCATCC+TGG | - | Chr8:30787523-30787542 | None:intergenic | 45.0% | |
ACCAGGATGATTGAGGAGAT+TGG | + | Chr8:30787519-30787538 | MsG0880043795.01.T01:CDS | 45.0% | |
AGGTGCACAGAAATCAGGAA+TGG | - | Chr8:30786923-30786942 | None:intergenic | 45.0% | |
CAATAGGATTCTCGAGGCAA+GGG | - | Chr8:30787431-30787450 | None:intergenic | 45.0% | |
CATGTACACTTCTTCGGTTC+CGG | - | Chr8:30787139-30787158 | None:intergenic | 45.0% | |
CCCATCCATGTACACTTCTT+CGG | - | Chr8:30787145-30787164 | None:intergenic | 45.0% | |
CCTCATCCAAGTCATATGGT+GGG | - | Chr8:30786771-30786790 | None:intergenic | 45.0% | |
GCACAGAAATCAGGAATGGA+AGG | - | Chr8:30786919-30786938 | None:intergenic | 45.0% | |
GCATCCTCATCCAAGTCATA+TGG | - | Chr8:30786775-30786794 | None:intergenic | 45.0% | |
TCCTCATCCAAGTCATATGG+TGG | - | Chr8:30786772-30786791 | None:intergenic | 45.0% | |
TCTTCGGTTCCGGTATAAGT+TGG | - | Chr8:30787129-30787148 | None:intergenic | 45.0% | |
TGATGACCCACCATATGACT+TGG | + | Chr8:30786762-30786781 | MsG0880043795.01.T01:CDS | 45.0% | |
TGATGAGGTGCACAGAAATC+AGG | - | Chr8:30786928-30786947 | None:intergenic | 45.0% | |
TTGGATGTGCACGTAAGTCA+TGG | + | Chr8:30786521-30786540 | MsG0880043795.01.T01:CDS | 45.0% | |
TTGGGTTCAGCGAGTGTTAA+TGG | + | Chr8:30786811-30786830 | MsG0880043795.01.T01:CDS | 45.0% | |
! | ACCGAAGAAGTGTACATGGA+TGG | + | Chr8:30787141-30787160 | MsG0880043795.01.T01:CDS | 45.0% |
! | CCGAAGAAGTGTACATGGAT+GGG | + | Chr8:30787142-30787161 | MsG0880043795.01.T01:CDS | 45.0% |
! | TAGATTGGCCGAAAGTGGAT+GGG | + | Chr8:30786710-30786729 | MsG0880043795.01.T01:CDS | 45.0% |
! | TTAGATTGGCCGAAAGTGGA+TGG | + | Chr8:30786709-30786728 | MsG0880043795.01.T01:CDS | 45.0% |
!! | GTCTTGAGTTCGTTGGTAGT+TGG | - | Chr8:30786892-30786911 | None:intergenic | 45.0% |
!! | GTTGGTAGTTGGATTCCACA+AGG | - | Chr8:30786881-30786900 | None:intergenic | 45.0% |
CCAATAGGATTCTCGAGGCA+AGG | - | Chr8:30787432-30787451 | None:intergenic | 50.0% | |
CCTCGAGAATCCTATTGGAG+CGG | + | Chr8:30787434-30787453 | MsG0880043795.01.T01:CDS | 50.0% | |
CCTTGCCTCGAGAATCCTAT+TGG | + | Chr8:30787429-30787448 | MsG0880043795.01.T01:CDS | 50.0% | |
CTCGAGAATCCTATTGGAGC+GGG | + | Chr8:30787435-30787454 | MsG0880043795.01.T01:CDS | 50.0% | |
CTGTCATCCCCATCCACTTT+CGG | - | Chr8:30786721-30786740 | None:intergenic | 50.0% | |
GGATGGGATGTCTCATTGGT+TGG | + | Chr8:30787158-30787177 | MsG0880043795.01.T01:CDS | 50.0% | |
TCGAGAATCCTATTGGAGCG+GGG | + | Chr8:30787436-30787455 | MsG0880043795.01.T01:CDS | 50.0% | |
! | AGATTGGCCGAAAGTGGATG+GGG | + | Chr8:30786711-30786730 | MsG0880043795.01.T01:CDS | 50.0% |
! | CCCACCATATGACTTGGATG+AGG | + | Chr8:30786768-30786787 | MsG0880043795.01.T01:CDS | 50.0% |
! | CGGAACCGAAGAAGTGTACA+TGG | + | Chr8:30787137-30787156 | MsG0880043795.01.T01:CDS | 50.0% |
! | TCGGTTCCGGTATAAGTTGG+AGG | - | Chr8:30787126-30787145 | None:intergenic | 50.0% |
AGGATTCTCGAGGCAAGGGA+AGG | - | Chr8:30787427-30787446 | None:intergenic | 55.0% | |
CCATTCTTCCCCGCTCCAAT+AGG | - | Chr8:30787447-30787466 | None:intergenic | 55.0% | |
CCGCTCCAATAGGATTCTCG+AGG | - | Chr8:30787437-30787456 | None:intergenic | 55.0% | |
CCTATTGGAGCGGGGAAGAA+TGG | + | Chr8:30787444-30787463 | MsG0880043795.01.T01:CDS | 55.0% | |
GACTTGGATGAGGATGCCTC+TGG | + | Chr8:30786778-30786797 | MsG0880043795.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 30786409 | 30787602 | 30786409 | ID=MsG0880043795.01;Name=MsG0880043795.01 |
Chr8 | mRNA | 30786409 | 30787602 | 30786409 | ID=MsG0880043795.01.T01;Parent=MsG0880043795.01;Name=MsG0880043795.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|397 |
Chr8 | exon | 30786409 | 30787602 | 30786409 | ID=MsG0880043795.01.T01:exon:7404;Parent=MsG0880043795.01.T01 |
Chr8 | CDS | 30786409 | 30787602 | 30786409 | ID=MsG0880043795.01.T01:cds;Parent=MsG0880043795.01.T01 |
Gene Sequence |
Protein sequence |