Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030214.01.T01 | GAU43401.1 | 64.658 | 365 | 121 | 5 | 1 | 358 | 64 | 427 | 1.82E-156 | 456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030214.01.T01 | A0A2Z6NHT3 | 64.658 | 365 | 121 | 5 | 1 | 358 | 64 | 427 | 8.70e-157 | 456 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030214.01.T01 | MTR_4g102410 | 50.729 | 343 | 156 | 7 | 18 | 356 | 115 | 448 | 1.18e-110 | 330 |
MsG0580030214.01.T01 | MTR_5g096630 | 48.864 | 352 | 160 | 6 | 18 | 358 | 72 | 414 | 2.06e-107 | 321 |
MsG0580030214.01.T01 | MTR_0129s0070 | 50.964 | 363 | 151 | 10 | 1 | 358 | 56 | 396 | 1.44e-103 | 311 |
MsG0580030214.01.T01 | MTR_0129s0120 | 50.000 | 362 | 154 | 10 | 1 | 357 | 56 | 395 | 9.90e-100 | 301 |
MsG0580030214.01.T01 | MTR_5g097330 | 47.268 | 366 | 168 | 11 | 1 | 358 | 55 | 403 | 4.55e-90 | 276 |
MsG0580030214.01.T01 | MTR_8g063440 | 49.091 | 330 | 139 | 11 | 34 | 358 | 78 | 383 | 4.35e-88 | 270 |
MsG0580030214.01.T01 | MTR_2g021800 | 45.833 | 336 | 157 | 8 | 36 | 358 | 93 | 416 | 7.67e-88 | 271 |
MsG0580030214.01.T01 | MTR_2g038680 | 43.864 | 383 | 162 | 13 | 1 | 357 | 55 | 410 | 3.33e-87 | 269 |
MsG0580030214.01.T01 | MTR_2g022000 | 45.915 | 355 | 163 | 10 | 1 | 338 | 55 | 397 | 1.59e-86 | 268 |
MsG0580030214.01.T01 | MTR_2g104340 | 44.595 | 370 | 169 | 11 | 2 | 358 | 50 | 396 | 1.17e-84 | 262 |
MsG0580030214.01.T01 | MTR_0129s0050 | 45.892 | 353 | 155 | 12 | 28 | 358 | 70 | 408 | 2.83e-83 | 259 |
MsG0580030214.01.T01 | MTR_4g117550 | 45.179 | 363 | 149 | 12 | 1 | 358 | 56 | 373 | 4.70e-83 | 257 |
MsG0580030214.01.T01 | MTR_8g041270 | 43.467 | 375 | 175 | 11 | 2 | 358 | 51 | 406 | 1.15e-82 | 257 |
MsG0580030214.01.T01 | MTR_6g086825 | 45.553 | 371 | 170 | 12 | 1 | 358 | 109 | 460 | 2.93e-81 | 255 |
MsG0580030214.01.T01 | MTR_6g079810 | 43.968 | 373 | 172 | 9 | 5 | 359 | 111 | 464 | 3.61e-79 | 250 |
MsG0580030214.01.T01 | MTR_5g074800 | 45.308 | 373 | 156 | 14 | 1 | 358 | 1 | 340 | 5.65e-79 | 246 |
MsG0580030214.01.T01 | MTR_2g021950 | 43.923 | 362 | 168 | 10 | 3 | 354 | 57 | 393 | 7.38e-79 | 247 |
MsG0580030214.01.T01 | MTR_7g069550 | 44.118 | 374 | 162 | 16 | 1 | 358 | 53 | 395 | 1.28e-78 | 246 |
MsG0580030214.01.T01 | MTR_0054s0100 | 45.507 | 345 | 157 | 10 | 28 | 358 | 81 | 408 | 2.72e-78 | 246 |
MsG0580030214.01.T01 | MTR_2g104280 | 41.828 | 361 | 173 | 12 | 18 | 359 | 64 | 406 | 5.09e-77 | 243 |
MsG0580030214.01.T01 | MTR_4g055820 | 45.963 | 322 | 143 | 8 | 2 | 311 | 54 | 356 | 6.36e-77 | 241 |
MsG0580030214.01.T01 | MTR_0054s0090 | 45.217 | 345 | 156 | 10 | 28 | 358 | 81 | 406 | 1.71e-76 | 241 |
MsG0580030214.01.T01 | MTR_5g098950 | 53.030 | 264 | 78 | 7 | 62 | 316 | 48 | 274 | 2.11e-76 | 237 |
MsG0580030214.01.T01 | MTR_5g097350 | 43.454 | 359 | 168 | 13 | 1 | 354 | 55 | 383 | 5.70e-76 | 239 |
MsG0580030214.01.T01 | MTR_5g091140 | 43.553 | 349 | 152 | 11 | 1 | 340 | 87 | 399 | 7.20e-76 | 240 |
MsG0580030214.01.T01 | MTR_2g021770 | 43.881 | 335 | 163 | 8 | 36 | 358 | 86 | 407 | 1.71e-75 | 239 |
MsG0580030214.01.T01 | MTR_0134s0060 | 40.897 | 379 | 182 | 9 | 2 | 357 | 52 | 411 | 3.37e-75 | 238 |
MsG0580030214.01.T01 | MTR_4g028510 | 45.758 | 330 | 153 | 8 | 40 | 358 | 88 | 402 | 3.89e-74 | 237 |
MsG0580030214.01.T01 | MTR_3g011120 | 44.304 | 316 | 145 | 10 | 36 | 347 | 81 | 369 | 8.93e-74 | 233 |
MsG0580030214.01.T01 | MTR_4g014370 | 39.257 | 377 | 189 | 11 | 3 | 358 | 52 | 409 | 1.48e-73 | 234 |
MsG0580030214.01.T01 | MTR_4g130330 | 42.162 | 370 | 170 | 11 | 6 | 358 | 49 | 391 | 6.17e-73 | 232 |
MsG0580030214.01.T01 | MTR_5g097220 | 40.945 | 381 | 174 | 12 | 3 | 358 | 54 | 408 | 1.45e-72 | 231 |
MsG0580030214.01.T01 | MTR_7g111700 | 44.207 | 328 | 145 | 6 | 36 | 358 | 71 | 365 | 1.64e-72 | 230 |
MsG0580030214.01.T01 | MTR_5g037680 | 40.761 | 368 | 168 | 12 | 1 | 352 | 47 | 380 | 6.88e-72 | 231 |
MsG0580030214.01.T01 | MTR_5g069390 | 40.431 | 371 | 190 | 11 | 1 | 358 | 65 | 417 | 1.63e-71 | 231 |
MsG0580030214.01.T01 | MTR_8g464770 | 43.574 | 319 | 157 | 8 | 36 | 354 | 81 | 376 | 3.54e-71 | 227 |
MsG0580030214.01.T01 | MTR_6g080680 | 40.274 | 365 | 172 | 8 | 1 | 352 | 58 | 389 | 5.08e-71 | 227 |
MsG0580030214.01.T01 | MTR_5g064700 | 41.710 | 386 | 179 | 11 | 1 | 358 | 1 | 368 | 1.21e-70 | 225 |
MsG0580030214.01.T01 | MTR_8g467670 | 42.073 | 328 | 156 | 10 | 36 | 358 | 81 | 379 | 1.71e-70 | 226 |
MsG0580030214.01.T01 | MTR_6g079770 | 41.953 | 379 | 178 | 12 | 1 | 356 | 56 | 415 | 2.59e-70 | 226 |
MsG0580030214.01.T01 | MTR_1g007410 | 40.331 | 362 | 180 | 9 | 1 | 350 | 61 | 398 | 2.77e-70 | 225 |
MsG0580030214.01.T01 | MTR_6g461660 | 42.049 | 371 | 176 | 11 | 1 | 359 | 58 | 401 | 3.15e-70 | 225 |
MsG0580030214.01.T01 | MTR_4g007940 | 39.437 | 355 | 177 | 12 | 17 | 355 | 7 | 339 | 4.50e-70 | 223 |
MsG0580030214.01.T01 | MTR_0831s0010 | 40.984 | 366 | 177 | 14 | 1 | 359 | 89 | 422 | 6.55e-70 | 225 |
MsG0580030214.01.T01 | MTR_6g079790 | 44.548 | 321 | 151 | 9 | 52 | 358 | 2 | 309 | 8.21e-70 | 221 |
MsG0580030214.01.T01 | MTR_1g007450 | 44.337 | 309 | 159 | 5 | 40 | 344 | 83 | 382 | 8.79e-70 | 224 |
MsG0580030214.01.T01 | MTR_8g012090 | 43.582 | 335 | 126 | 12 | 1 | 327 | 55 | 334 | 1.39e-69 | 221 |
MsG0580030214.01.T01 | MTR_7g017130 | 42.424 | 363 | 184 | 11 | 1 | 359 | 57 | 398 | 2.18e-69 | 223 |
MsG0580030214.01.T01 | MTR_6g090250 | 40.957 | 376 | 179 | 10 | 7 | 353 | 58 | 419 | 2.78e-69 | 223 |
MsG0580030214.01.T01 | MTR_4g028680 | 44.377 | 329 | 158 | 8 | 40 | 358 | 87 | 400 | 4.50e-69 | 222 |
MsG0580030214.01.T01 | MTR_6g078010 | 41.796 | 323 | 151 | 8 | 40 | 353 | 36 | 330 | 5.29e-69 | 220 |
MsG0580030214.01.T01 | MTR_6g478230 | 40.682 | 381 | 164 | 13 | 1 | 358 | 66 | 407 | 2.25e-68 | 221 |
MsG0580030214.01.T01 | MTR_2g066200 | 43.252 | 326 | 158 | 11 | 39 | 357 | 82 | 387 | 6.27e-68 | 219 |
MsG0580030214.01.T01 | MTR_7g017040 | 41.398 | 372 | 178 | 11 | 1 | 359 | 55 | 399 | 1.81e-67 | 218 |
MsG0580030214.01.T01 | MTR_2g066170 | 42.901 | 324 | 160 | 11 | 39 | 357 | 82 | 385 | 2.90e-67 | 217 |
MsG0580030214.01.T01 | MTR_6g090180 | 40.327 | 367 | 188 | 9 | 1 | 354 | 86 | 434 | 6.80e-67 | 218 |
MsG0580030214.01.T01 | MTR_7g017170 | 41.067 | 375 | 184 | 12 | 1 | 359 | 57 | 410 | 1.31e-66 | 216 |
MsG0580030214.01.T01 | MTR_5g097680 | 41.299 | 385 | 188 | 13 | 1 | 359 | 56 | 428 | 2.25e-66 | 216 |
MsG0580030214.01.T01 | MTR_5g022850 | 41.994 | 331 | 166 | 8 | 39 | 359 | 40 | 354 | 2.80e-66 | 213 |
MsG0580030214.01.T01 | MTR_1g053510 | 40.517 | 348 | 157 | 10 | 31 | 353 | 79 | 401 | 4.28e-66 | 214 |
MsG0580030214.01.T01 | MTR_5g072060 | 43.662 | 355 | 139 | 13 | 1 | 339 | 45 | 354 | 6.70e-66 | 219 |
MsG0580030214.01.T01 | MTR_8g013000 | 43.293 | 328 | 151 | 11 | 1 | 316 | 49 | 353 | 3.25e-65 | 212 |
MsG0580030214.01.T01 | MTR_1g007430 | 42.122 | 311 | 147 | 7 | 10 | 316 | 43 | 324 | 3.27e-65 | 210 |
MsG0580030214.01.T01 | MTR_2g064950 | 42.899 | 338 | 147 | 13 | 17 | 332 | 51 | 364 | 4.93e-65 | 211 |
MsG0580030214.01.T01 | MTR_8g046310 | 37.808 | 365 | 169 | 14 | 1 | 353 | 55 | 373 | 5.07e-64 | 208 |
MsG0580030214.01.T01 | MTR_8g064890 | 41.141 | 333 | 166 | 10 | 33 | 358 | 79 | 388 | 7.31e-64 | 208 |
MsG0580030214.01.T01 | MTR_5g059430 | 38.522 | 379 | 191 | 13 | 1 | 356 | 65 | 424 | 3.78e-63 | 207 |
MsG0580030214.01.T01 | MTR_4g028660 | 41.846 | 325 | 163 | 9 | 40 | 354 | 87 | 395 | 1.06e-62 | 205 |
MsG0580030214.01.T01 | MTR_4g027450 | 41.846 | 325 | 163 | 9 | 40 | 354 | 87 | 395 | 1.06e-62 | 205 |
MsG0580030214.01.T01 | MTR_2g021920 | 50.209 | 239 | 102 | 6 | 127 | 354 | 37 | 269 | 2.23e-62 | 201 |
MsG0580030214.01.T01 | MTR_6g004450 | 50.204 | 245 | 99 | 7 | 119 | 357 | 41 | 268 | 2.50e-62 | 201 |
MsG0580030214.01.T01 | MTR_2g066150 | 41.846 | 325 | 143 | 12 | 39 | 358 | 77 | 360 | 3.03e-62 | 203 |
MsG0580030214.01.T01 | MTR_2g065840 | 39.080 | 348 | 176 | 12 | 25 | 359 | 66 | 390 | 2.87e-61 | 201 |
MsG0580030214.01.T01 | MTR_2g034700 | 40.390 | 359 | 164 | 14 | 1 | 351 | 53 | 369 | 4.84e-61 | 200 |
MsG0580030214.01.T01 | MTR_5g096910 | 39.818 | 329 | 162 | 9 | 40 | 357 | 89 | 392 | 5.48e-61 | 201 |
MsG0580030214.01.T01 | MTR_8g033140 | 38.936 | 357 | 158 | 10 | 36 | 358 | 88 | 418 | 8.64e-61 | 201 |
MsG0580030214.01.T01 | MTR_2g065860 | 38.395 | 349 | 174 | 11 | 20 | 357 | 69 | 387 | 1.97e-60 | 199 |
MsG0580030214.01.T01 | MTR_5g092850 | 39.510 | 367 | 163 | 15 | 13 | 354 | 66 | 398 | 8.43e-60 | 198 |
MsG0580030214.01.T01 | MTR_5g068490 | 41.562 | 320 | 141 | 11 | 42 | 358 | 1 | 277 | 2.12e-59 | 193 |
MsG0580030214.01.T01 | MTR_7g079640 | 39.714 | 350 | 150 | 15 | 1 | 336 | 52 | 354 | 1.17e-58 | 194 |
MsG0580030214.01.T01 | MTR_5g043605 | 40.810 | 321 | 151 | 14 | 46 | 358 | 50 | 339 | 1.65e-58 | 194 |
MsG0580030214.01.T01 | MTR_8g033110 | 38.619 | 391 | 179 | 16 | 1 | 358 | 53 | 415 | 2.74e-58 | 194 |
MsG0580030214.01.T01 | MTR_5g076490 | 43.787 | 338 | 145 | 12 | 38 | 359 | 29 | 337 | 6.26e-58 | 191 |
MsG0580030214.01.T01 | MTR_6g087620 | 41.066 | 319 | 136 | 11 | 41 | 348 | 2 | 279 | 1.43e-57 | 188 |
MsG0580030214.01.T01 | MTR_8g046200 | 38.346 | 399 | 153 | 19 | 11 | 354 | 58 | 418 | 3.03e-57 | 192 |
MsG0580030214.01.T01 | MTR_4g028750 | 41.694 | 307 | 152 | 9 | 40 | 336 | 87 | 376 | 9.75e-56 | 187 |
MsG0580030214.01.T01 | MTR_8g064790 | 34.819 | 359 | 158 | 8 | 1 | 358 | 54 | 337 | 1.05e-55 | 186 |
MsG0580030214.01.T01 | MTR_5g092860 | 37.921 | 356 | 154 | 13 | 1 | 335 | 41 | 350 | 1.80e-55 | 186 |
MsG0580030214.01.T01 | MTR_5g024260 | 41.479 | 311 | 148 | 11 | 41 | 336 | 93 | 384 | 4.73e-55 | 186 |
MsG0580030214.01.T01 | MTR_8g039500 | 40.404 | 297 | 151 | 9 | 35 | 327 | 72 | 346 | 4.62e-54 | 181 |
MsG0580030214.01.T01 | MTR_8g033090 | 38.081 | 344 | 159 | 13 | 46 | 358 | 92 | 412 | 2.83e-53 | 181 |
MsG0580030214.01.T01 | MTR_5g086590 | 41.353 | 266 | 119 | 9 | 83 | 340 | 2 | 238 | 1.04e-52 | 174 |
MsG0580030214.01.T01 | MTR_8g018110 | 36.198 | 384 | 180 | 16 | 1 | 358 | 53 | 397 | 1.19e-52 | 179 |
MsG0580030214.01.T01 | MTR_1g050312 | 38.154 | 325 | 148 | 11 | 30 | 347 | 6 | 284 | 1.37e-52 | 176 |
MsG0580030214.01.T01 | MTR_8g032980 | 37.571 | 354 | 162 | 11 | 46 | 358 | 86 | 421 | 3.49e-52 | 179 |
MsG0580030214.01.T01 | MTR_6g090260 | 51.562 | 192 | 85 | 3 | 165 | 353 | 73 | 259 | 7.23e-52 | 173 |
MsG0580030214.01.T01 | MTR_8g046220 | 36.104 | 385 | 177 | 14 | 1 | 354 | 56 | 402 | 1.25e-51 | 177 |
MsG0580030214.01.T01 | MTR_5g097850 | 46.491 | 228 | 91 | 6 | 142 | 357 | 36 | 244 | 6.91e-51 | 170 |
MsG0580030214.01.T01 | MTR_5g074850 | 39.252 | 321 | 155 | 14 | 39 | 338 | 103 | 404 | 9.58e-50 | 179 |
MsG0580030214.01.T01 | MTR_8g036970 | 38.585 | 311 | 116 | 13 | 40 | 344 | 71 | 312 | 3.87e-49 | 169 |
MsG0580030214.01.T01 | MTR_7g023800 | 38.272 | 324 | 139 | 7 | 36 | 349 | 30 | 302 | 4.32e-49 | 167 |
MsG0580030214.01.T01 | MTR_5g075370 | 36.695 | 357 | 170 | 15 | 17 | 348 | 62 | 387 | 2.07e-48 | 174 |
MsG0580030214.01.T01 | MTR_1g098180 | 37.943 | 282 | 127 | 8 | 89 | 355 | 115 | 363 | 1.35e-46 | 162 |
MsG0580030214.01.T01 | MTR_8g063330 | 35.737 | 319 | 176 | 11 | 1 | 313 | 53 | 348 | 2.59e-46 | 164 |
MsG0580030214.01.T01 | MTR_3g018750 | 41.935 | 248 | 119 | 8 | 127 | 358 | 3 | 241 | 2.93e-46 | 158 |
MsG0580030214.01.T01 | MTR_8g035690 | 39.007 | 282 | 122 | 10 | 107 | 357 | 40 | 302 | 5.62e-46 | 159 |
MsG0580030214.01.T01 | MTR_4g014370 | 44.976 | 209 | 99 | 5 | 152 | 358 | 143 | 337 | 6.20e-46 | 160 |
MsG0580030214.01.T01 | MTR_5g023970 | 47.475 | 198 | 96 | 6 | 162 | 358 | 6 | 196 | 6.91e-45 | 153 |
MsG0580030214.01.T01 | MTR_4g016000 | 43.636 | 220 | 89 | 9 | 99 | 311 | 2 | 193 | 9.88e-45 | 153 |
MsG0580030214.01.T01 | MTR_6g009350 | 49.020 | 204 | 91 | 6 | 121 | 321 | 2 | 195 | 2.22e-44 | 152 |
MsG0580030214.01.T01 | MTR_8g033000 | 34.584 | 373 | 193 | 13 | 20 | 358 | 8 | 363 | 2.55e-44 | 156 |
MsG0580030214.01.T01 | MTR_7g016930 | 37.000 | 300 | 166 | 8 | 20 | 316 | 52 | 331 | 7.17e-43 | 152 |
MsG0580030214.01.T01 | MTR_6g079730 | 57.895 | 133 | 56 | 0 | 221 | 353 | 13 | 145 | 1.52e-41 | 142 |
MsG0580030214.01.T01 | MTR_7g019250 | 38.583 | 254 | 122 | 9 | 94 | 340 | 192 | 418 | 4.12e-38 | 142 |
MsG0580030214.01.T01 | MTR_5g066420 | 48.322 | 149 | 73 | 2 | 203 | 347 | 1 | 149 | 2.28e-37 | 132 |
MsG0580030214.01.T01 | MTR_8g063370 | 32.907 | 313 | 183 | 11 | 42 | 349 | 93 | 383 | 3.43e-37 | 138 |
MsG0580030214.01.T01 | MTR_8g063310 | 31.077 | 325 | 186 | 14 | 39 | 349 | 88 | 388 | 8.57e-37 | 137 |
MsG0580030214.01.T01 | MTR_8g063350 | 31.661 | 319 | 181 | 11 | 40 | 348 | 45 | 336 | 5.76e-35 | 131 |
MsG0580030214.01.T01 | MTR_2g104260 | 36.842 | 247 | 123 | 9 | 2 | 234 | 50 | 277 | 1.27e-34 | 128 |
MsG0580030214.01.T01 | MTR_3g030620 | 45.783 | 166 | 84 | 4 | 196 | 356 | 16 | 180 | 1.95e-34 | 125 |
MsG0580030214.01.T01 | MTR_5g096920 | 45.806 | 155 | 78 | 3 | 203 | 356 | 1 | 150 | 5.84e-33 | 120 |
MsG0580030214.01.T01 | MTR_5g096900 | 38.851 | 296 | 129 | 14 | 3 | 281 | 53 | 313 | 5.49e-32 | 122 |
MsG0580030214.01.T01 | MTR_5g097660 | 51.818 | 110 | 52 | 1 | 246 | 354 | 7 | 116 | 5.42e-31 | 114 |
MsG0580030214.01.T01 | MTR_7g017150 | 42.647 | 204 | 105 | 7 | 159 | 359 | 74 | 268 | 5.10e-30 | 116 |
MsG0580030214.01.T01 | MTR_7g101200 | 37.805 | 246 | 106 | 13 | 85 | 320 | 28 | 236 | 5.38e-29 | 112 |
MsG0580030214.01.T01 | MTR_5g036250 | 63.415 | 82 | 29 | 1 | 269 | 350 | 23 | 103 | 6.61e-29 | 110 |
MsG0580030214.01.T01 | MTR_7g017120 | 41.667 | 204 | 107 | 7 | 159 | 359 | 73 | 267 | 9.98e-29 | 112 |
MsG0580030214.01.T01 | MTR_7g104710 | 34.859 | 284 | 121 | 10 | 1 | 273 | 56 | 286 | 3.57e-28 | 112 |
MsG0580030214.01.T01 | MTR_2g022020 | 51.429 | 105 | 49 | 1 | 250 | 354 | 14 | 116 | 1.41e-27 | 105 |
MsG0580030214.01.T01 | MTR_5g086780 | 50.000 | 106 | 53 | 0 | 229 | 334 | 123 | 228 | 3.74e-27 | 107 |
MsG0580030214.01.T01 | MTR_5g097540 | 42.000 | 150 | 72 | 5 | 168 | 316 | 98 | 233 | 1.32e-25 | 105 |
MsG0580030214.01.T01 | MTR_1g047080 | 32.000 | 325 | 145 | 15 | 40 | 358 | 29 | 283 | 5.24e-25 | 103 |
MsG0580030214.01.T01 | MTR_1g076810 | 34.973 | 183 | 104 | 5 | 1 | 183 | 57 | 224 | 3.82e-23 | 101 |
MsG0580030214.01.T01 | MTR_5g094350 | 38.919 | 185 | 92 | 7 | 75 | 245 | 101 | 278 | 5.71e-23 | 97.4 |
MsG0580030214.01.T01 | MTR_6g070880 | 37.688 | 199 | 96 | 7 | 1 | 184 | 71 | 256 | 1.23e-22 | 95.9 |
MsG0580030214.01.T01 | MTR_6g071420 | 37.688 | 199 | 96 | 7 | 1 | 184 | 71 | 256 | 1.23e-22 | 95.9 |
MsG0580030214.01.T01 | MTR_5g037190 | 33.475 | 236 | 111 | 8 | 1 | 229 | 55 | 251 | 6.61e-22 | 94.0 |
MsG0580030214.01.T01 | MTR_5g091150 | 35.060 | 251 | 87 | 12 | 52 | 279 | 2 | 199 | 3.09e-21 | 90.9 |
MsG0580030214.01.T01 | MTR_1g050308 | 48.649 | 111 | 52 | 2 | 250 | 358 | 240 | 347 | 6.24e-21 | 92.8 |
MsG0580030214.01.T01 | MTR_1g050308 | 30.201 | 149 | 85 | 5 | 39 | 184 | 104 | 236 | 2.36e-13 | 70.9 |
MsG0580030214.01.T01 | MTR_5g096050 | 49.541 | 109 | 43 | 3 | 203 | 300 | 1 | 108 | 1.16e-20 | 86.7 |
MsG0580030214.01.T01 | MTR_4g133170 | 25.298 | 336 | 197 | 15 | 20 | 337 | 40 | 339 | 2.44e-19 | 89.0 |
MsG0580030214.01.T01 | MTR_1g050305 | 55.556 | 81 | 31 | 2 | 261 | 336 | 23 | 103 | 3.16e-19 | 83.6 |
MsG0580030214.01.T01 | MTR_8g073570 | 39.130 | 138 | 62 | 6 | 6 | 138 | 50 | 170 | 3.26e-19 | 84.3 |
MsG0580030214.01.T01 | MTR_5g097820 | 31.624 | 234 | 126 | 11 | 1 | 226 | 62 | 269 | 3.64e-19 | 86.7 |
MsG0580030214.01.T01 | MTR_2g029990 | 28.959 | 221 | 123 | 9 | 74 | 293 | 151 | 338 | 4.31e-18 | 85.1 |
MsG0580030214.01.T01 | MTR_6g465360 | 32.796 | 186 | 91 | 7 | 1 | 174 | 101 | 264 | 4.04e-17 | 81.3 |
MsG0580030214.01.T01 | MTR_4g094400 | 47.170 | 106 | 43 | 2 | 199 | 291 | 6 | 111 | 6.52e-17 | 76.6 |
MsG0580030214.01.T01 | MTR_2g026010 | 26.882 | 279 | 159 | 13 | 74 | 333 | 91 | 343 | 2.07e-16 | 80.1 |
MsG0580030214.01.T01 | MTR_1g068835 | 24.437 | 311 | 193 | 13 | 56 | 357 | 76 | 353 | 4.82e-16 | 79.0 |
MsG0580030214.01.T01 | MTR_1g115205 | 33.533 | 167 | 89 | 4 | 46 | 210 | 90 | 236 | 6.29e-16 | 77.0 |
MsG0580030214.01.T01 | MTR_1g068875 | 24.202 | 376 | 222 | 19 | 1 | 357 | 21 | 352 | 2.89e-15 | 76.6 |
MsG0580030214.01.T01 | MTR_3g083010 | 24.224 | 322 | 194 | 12 | 45 | 333 | 70 | 374 | 3.55e-15 | 76.6 |
MsG0580030214.01.T01 | MTR_2g031640 | 25.714 | 315 | 181 | 15 | 58 | 357 | 81 | 357 | 4.11e-15 | 76.3 |
MsG0580030214.01.T01 | MTR_2g021155 | 28.019 | 207 | 126 | 7 | 97 | 302 | 711 | 895 | 4.46e-15 | 77.0 |
MsG0580030214.01.T01 | MTR_2g031720 | 25.874 | 286 | 173 | 12 | 61 | 333 | 86 | 345 | 5.53e-15 | 75.9 |
MsG0580030214.01.T01 | MTR_4g021785 | 27.465 | 284 | 158 | 12 | 87 | 359 | 107 | 353 | 9.30e-15 | 75.1 |
MsG0580030214.01.T01 | MTR_4g117720 | 30.496 | 282 | 154 | 15 | 87 | 352 | 113 | 368 | 2.34e-14 | 73.9 |
MsG0580030214.01.T01 | MTR_2g028110 | 29.329 | 283 | 171 | 15 | 59 | 333 | 78 | 339 | 2.51e-14 | 73.9 |
MsG0580030214.01.T01 | MTR_2g425980 | 27.857 | 280 | 158 | 14 | 94 | 353 | 121 | 376 | 2.77e-14 | 73.9 |
MsG0580030214.01.T01 | MTR_4g023130 | 28.413 | 271 | 148 | 12 | 97 | 359 | 79 | 311 | 3.42e-14 | 72.8 |
MsG0580030214.01.T01 | MTR_2g021050 | 29.864 | 221 | 128 | 10 | 121 | 330 | 125 | 329 | 3.54e-14 | 73.6 |
MsG0580030214.01.T01 | MTR_2g426060 | 25.661 | 378 | 232 | 18 | 1 | 353 | 23 | 376 | 4.04e-14 | 73.6 |
MsG0580030214.01.T01 | MTR_5g049560 | 33.333 | 159 | 91 | 5 | 1 | 149 | 3 | 156 | 4.79e-14 | 72.0 |
MsG0580030214.01.T01 | MTR_2g028140 | 23.715 | 253 | 165 | 9 | 94 | 333 | 130 | 367 | 5.54e-14 | 73.2 |
MsG0580030214.01.T01 | MTR_0667s0010 | 24.013 | 304 | 200 | 13 | 1 | 293 | 23 | 306 | 5.72e-14 | 72.8 |
MsG0580030214.01.T01 | MTR_8g102520 | 26.616 | 263 | 166 | 10 | 97 | 354 | 75 | 315 | 5.91e-14 | 72.4 |
MsG0580030214.01.T01 | MTR_3g006670 | 28.000 | 250 | 134 | 12 | 53 | 296 | 130 | 339 | 6.64e-14 | 72.8 |
MsG0580030214.01.T01 | MTR_2g024100 | 26.198 | 313 | 172 | 15 | 53 | 333 | 78 | 363 | 8.51e-14 | 72.4 |
MsG0580030214.01.T01 | MTR_1g050542 | 26.493 | 268 | 152 | 11 | 74 | 331 | 149 | 381 | 1.04e-13 | 72.0 |
MsG0580030214.01.T01 | MTR_2g025960 | 25.177 | 282 | 160 | 13 | 74 | 328 | 6 | 263 | 1.19e-13 | 71.2 |
MsG0580030214.01.T01 | MTR_7g079370 | 27.037 | 270 | 167 | 11 | 97 | 354 | 98 | 349 | 1.30e-13 | 71.6 |
MsG0580030214.01.T01 | MTR_0064s0160 | 27.917 | 240 | 146 | 8 | 125 | 352 | 193 | 417 | 1.59e-13 | 71.6 |
MsG0580030214.01.T01 | MTR_4g023080 | 26.882 | 279 | 142 | 13 | 97 | 359 | 120 | 352 | 2.40e-13 | 70.9 |
MsG0580030214.01.T01 | MTR_5g094360 | 50.000 | 84 | 38 | 4 | 104 | 184 | 40 | 122 | 3.22e-13 | 67.0 |
MsG0580030214.01.T01 | MTR_2g021860 | 33.884 | 121 | 70 | 4 | 50 | 166 | 13 | 127 | 4.85e-13 | 66.2 |
MsG0580030214.01.T01 | MTR_3g036335 | 26.459 | 257 | 146 | 12 | 70 | 325 | 139 | 353 | 6.59e-13 | 69.7 |
MsG0580030214.01.T01 | MTR_3g013740 | 26.148 | 283 | 151 | 14 | 35 | 297 | 102 | 346 | 8.04e-13 | 69.3 |
MsG0580030214.01.T01 | MTR_4g070550 | 24.400 | 250 | 162 | 9 | 94 | 330 | 124 | 359 | 1.42e-12 | 68.6 |
MsG0580030214.01.T01 | MTR_4g023150 | 27.839 | 273 | 152 | 12 | 97 | 359 | 121 | 358 | 2.03e-12 | 68.2 |
MsG0580030214.01.T01 | MTR_4g122850 | 26.667 | 270 | 170 | 11 | 97 | 359 | 114 | 362 | 2.69e-12 | 67.8 |
MsG0580030214.01.T01 | MTR_3g097190 | 43.038 | 79 | 39 | 1 | 253 | 331 | 9 | 81 | 3.43e-12 | 64.7 |
MsG0580030214.01.T01 | MTR_2g021150 | 26.432 | 227 | 130 | 9 | 74 | 297 | 116 | 308 | 4.86e-12 | 67.0 |
MsG0580030214.01.T01 | MTR_4g023190 | 27.941 | 272 | 152 | 12 | 97 | 359 | 121 | 357 | 4.92e-12 | 67.0 |
MsG0580030214.01.T01 | MTR_4g023120 | 29.146 | 199 | 116 | 9 | 97 | 293 | 114 | 289 | 5.47e-12 | 66.6 |
MsG0580030214.01.T01 | MTR_2g426070 | 26.042 | 288 | 171 | 14 | 74 | 341 | 106 | 371 | 8.14e-12 | 66.2 |
MsG0580030214.01.T01 | MTR_4g117780 | 25.887 | 282 | 184 | 8 | 82 | 359 | 105 | 365 | 8.29e-12 | 66.2 |
MsG0580030214.01.T01 | MTR_2g461450 | 25.651 | 269 | 139 | 12 | 74 | 320 | 109 | 338 | 1.03e-11 | 65.9 |
MsG0580030214.01.T01 | MTR_3g006570 | 27.273 | 220 | 124 | 11 | 74 | 291 | 118 | 303 | 1.07e-11 | 65.9 |
MsG0580030214.01.T01 | MTR_4g109270 | 26.087 | 276 | 156 | 9 | 97 | 359 | 122 | 362 | 1.12e-11 | 65.9 |
MsG0580030214.01.T01 | MTR_3g034180 | 26.786 | 280 | 154 | 13 | 97 | 356 | 236 | 484 | 1.14e-11 | 66.2 |
MsG0580030214.01.T01 | MTR_0044s0300 | 29.000 | 200 | 106 | 9 | 94 | 291 | 152 | 317 | 1.74e-11 | 65.5 |
MsG0580030214.01.T01 | MTR_2g024110 | 23.837 | 344 | 193 | 18 | 40 | 357 | 61 | 361 | 1.80e-11 | 65.1 |
MsG0580030214.01.T01 | MTR_3g010590 | 26.141 | 241 | 129 | 11 | 56 | 296 | 122 | 313 | 2.08e-11 | 65.1 |
MsG0580030214.01.T01 | MTR_3g010970 | 24.775 | 222 | 109 | 8 | 74 | 293 | 155 | 320 | 2.87e-11 | 64.7 |
MsG0580030214.01.T01 | MTR_7g017270 | 55.738 | 61 | 14 | 1 | 244 | 304 | 40 | 87 | 2.94e-11 | 59.7 |
MsG0580030214.01.T01 | MTR_6g027910 | 25.692 | 253 | 145 | 11 | 76 | 321 | 114 | 330 | 3.84e-11 | 64.3 |
MsG0580030214.01.T01 | MTR_1g068860 | 25.455 | 220 | 135 | 11 | 124 | 333 | 139 | 339 | 5.04e-11 | 63.9 |
MsG0580030214.01.T01 | MTR_8g099460 | 25.325 | 308 | 180 | 13 | 45 | 330 | 66 | 345 | 6.34e-11 | 63.5 |
MsG0580030214.01.T01 | MTR_6g060650 | 28.302 | 265 | 157 | 11 | 97 | 354 | 128 | 366 | 7.61e-11 | 63.2 |
MsG0580030214.01.T01 | MTR_3g013770 | 28.889 | 225 | 125 | 11 | 74 | 296 | 135 | 326 | 8.57e-11 | 63.2 |
MsG0580030214.01.T01 | MTR_3g036290 | 27.273 | 242 | 122 | 11 | 74 | 311 | 120 | 311 | 8.95e-11 | 63.2 |
MsG0580030214.01.T01 | MTR_2g426090 | 25.188 | 266 | 162 | 12 | 74 | 323 | 101 | 345 | 9.16e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030214.01.T01 | AT3G06240 | 24.555 | 281 | 180 | 10 | 74 | 352 | 168 | 418 | 2.21e-14 | 74.3 |
Find 91 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATCAAACTCTTTATTAT+TGG | 0.177591 | 5:-108344710 | MsG0580030214.01.T01:CDS |
AATCCATGAAAATTAAAATA+TGG | 0.206133 | 5:+108345205 | None:intergenic |
TTAGGTACACTTAGTATTAA+TGG | 0.206877 | 5:-108345361 | MsG0580030214.01.T01:CDS |
CACCAATCTCATCAATTATC+TGG | 0.219015 | 5:+108344588 | None:intergenic |
ATAGCTTTCAAGCTGTATTA+TGG | 0.229225 | 5:-108345297 | MsG0580030214.01.T01:CDS |
ATTGATGAGATTGGTGTTAA+AGG | 0.236075 | 5:-108344581 | MsG0580030214.01.T01:CDS |
GAAAAGATGGTGAACTAGTT+TGG | 0.244361 | 5:-108344625 | MsG0580030214.01.T01:CDS |
CCGATGAGAGGTTTGAAAAT+AGG | 0.341961 | 5:-108345438 | MsG0580030214.01.T01:CDS |
ATGAGTCTGTGCCACCTTAT+CGG | 0.346680 | 5:-108345231 | MsG0580030214.01.T01:CDS |
TCTTCATCTTCGTCGGTTGT+AGG | 0.365785 | 5:+108345127 | None:intergenic |
ATATAATTCAACAGGTTGTT+TGG | 0.374603 | 5:-108344924 | MsG0580030214.01.T01:CDS |
CGTATCACCACCGCCATGAT+AGG | 0.381660 | 5:+108345534 | None:intergenic |
GATGAGCCAGTGACCGGTTC+CGG | 0.384767 | 5:-108344992 | MsG0580030214.01.T01:CDS |
AATAGAACCTGCCATGATAA+TGG | 0.399943 | 5:+108345467 | None:intergenic |
AATGATTTATATAATTCAAC+AGG | 0.416573 | 5:-108344932 | MsG0580030214.01.T01:CDS |
ACCACGGATTCCGCGGTGGC+TGG | 0.418546 | 5:+108345271 | None:intergenic |
TCATGTGTCTCAGTCAGTTC+AGG | 0.424103 | 5:+108345493 | None:intergenic |
ATCCATGAAAATTAAAATAT+GGG | 0.426584 | 5:+108345206 | None:intergenic |
TGTAGTCATACAAAGACAAT+TGG | 0.437617 | 5:-108344828 | MsG0580030214.01.T01:CDS |
AACTCCAATGGGACACTCAA+TGG | 0.438329 | 5:+108344676 | None:intergenic |
TAAGGTGGCACAGACTCATC+GGG | 0.443907 | 5:+108345235 | None:intergenic |
CCCATTGGAGTTGGGAAGAA+AGG | 0.445937 | 5:-108344665 | MsG0580030214.01.T01:CDS |
CCTTTCTTCCCAACTCCAAT+GGG | 0.445998 | 5:+108344665 | None:intergenic |
TTAAAATATGGGTTCCGATA+AGG | 0.447833 | 5:+108345217 | None:intergenic |
TTGAGTGTCCCATTGGAGTT+GGG | 0.448362 | 5:-108344673 | MsG0580030214.01.T01:CDS |
GAGATGTCATCCTCATGAAA+TGG | 0.449410 | 5:+108345394 | None:intergenic |
GAAAACCTTCTTCCGATTGG+AGG | 0.449570 | 5:-108344524 | MsG0580030214.01.T01:CDS |
TACACTCCGGAACCGGTCAC+TGG | 0.450225 | 5:+108344986 | None:intergenic |
AAAGAAAACCTTCTTCCGAT+TGG | 0.459467 | 5:-108344527 | MsG0580030214.01.T01:CDS |
CTTCATCTTCGTCGGTTGTA+GGG | 0.472855 | 5:+108345128 | None:intergenic |
GCCTTTCTTCCCAACTCCAA+TGG | 0.474432 | 5:+108344664 | None:intergenic |
TACTTATTAATTCCTCCAAT+CGG | 0.474958 | 5:+108344512 | None:intergenic |
ATTTGCTTCAAAAGAAAAGA+TGG | 0.475835 | 5:-108344638 | MsG0580030214.01.T01:CDS |
TCCGCACTCATTTCTCATCT+AGG | 0.481415 | 5:-108345564 | MsG0580030214.01.T01:CDS |
GGCTCATCATAATCACAATT+CGG | 0.483503 | 5:+108345007 | None:intergenic |
GGCACAGACTCATCGGGGCT+AGG | 0.484191 | 5:+108345241 | None:intergenic |
CCTCCCATTGAGTGTCCCAT+TGG | 0.484234 | 5:-108344680 | MsG0580030214.01.T01:CDS |
ATTGAGTGTCCCATTGGAGT+TGG | 0.491134 | 5:-108344674 | MsG0580030214.01.T01:CDS |
ACTCCAATGGGACACTCAAT+GGG | 0.500369 | 5:+108344677 | None:intergenic |
TAGATCGTATGACCCCTTGT+TGG | 0.502467 | 5:-108345089 | MsG0580030214.01.T01:CDS |
TCCCAGATAATTGATGAGAT+TGG | 0.504419 | 5:-108344590 | MsG0580030214.01.T01:CDS |
TAATTCCTCCAATCGGAAGA+AGG | 0.505203 | 5:+108344519 | None:intergenic |
GTTCATGTACACTCCGGAAC+CGG | 0.507728 | 5:+108344979 | None:intergenic |
TCTAGGAACAGTTCCTATCA+TGG | 0.516933 | 5:-108345547 | MsG0580030214.01.T01:CDS |
TAGACAACACCTCGTTGCTC+AGG | 0.517484 | 5:+108344891 | None:intergenic |
ACATGAACGGAGCGTGTCAT+TGG | 0.518328 | 5:-108344964 | MsG0580030214.01.T01:CDS |
ACCAATCTCATCAATTATCT+GGG | 0.533320 | 5:+108344589 | None:intergenic |
ATAAGGTGGCACAGACTCAT+CGG | 0.535326 | 5:+108345234 | None:intergenic |
ACACATGAATACCATTATCA+TGG | 0.536780 | 5:-108345478 | MsG0580030214.01.T01:CDS |
TGAACGGAGCGTGTCATTGG+TGG | 0.537883 | 5:-108344961 | MsG0580030214.01.T01:CDS |
TCCAGCCACCGCGGAATCCG+TGG | 0.546066 | 5:-108345272 | MsG0580030214.01.T01:CDS |
GAACGGAGCGTGTCATTGGT+GGG | 0.547748 | 5:-108344960 | MsG0580030214.01.T01:CDS |
ATAGTCTTAGAAGTAACTCA+TGG | 0.565035 | 5:-108345060 | MsG0580030214.01.T01:CDS |
GCAAGATAGGCGTAGAGGAA+TGG | 0.565160 | 5:-108345323 | MsG0580030214.01.T01:CDS |
AACAGTTCCTATCATGGCGG+TGG | 0.566638 | 5:-108345541 | MsG0580030214.01.T01:CDS |
CTTTATAATCATCTCTAACA+TGG | 0.570120 | 5:+108345173 | None:intergenic |
GGACACTCAATGGGAGGCAT+CGG | 0.573993 | 5:+108344686 | None:intergenic |
TGGGACATCTTCATCTTCGT+CGG | 0.574535 | 5:+108345120 | None:intergenic |
TCTATTTGCTCCCCGATGAG+AGG | 0.574784 | 5:-108345450 | MsG0580030214.01.T01:CDS |
ATGAATACCATTATCATGGC+AGG | 0.575296 | 5:-108345474 | MsG0580030214.01.T01:CDS |
TCATACGATCTATCTTCCGA+TGG | 0.577996 | 5:+108345100 | None:intergenic |
TTTGGGTGAACTCGGCGTGA+AGG | 0.578558 | 5:-108344738 | MsG0580030214.01.T01:CDS |
AGTCATACAAAGACAATTGG+TGG | 0.587440 | 5:-108344825 | MsG0580030214.01.T01:CDS |
GATTATGATGAGCCAGTGAC+CGG | 0.590467 | 5:-108344998 | MsG0580030214.01.T01:CDS |
TCATCCTCATGAAATGGAGG+TGG | 0.597818 | 5:+108345400 | None:intergenic |
AAATATGGGTTCCGATAAGG+TGG | 0.599457 | 5:+108345220 | None:intergenic |
AGACTATATATCTCCAACAA+GGG | 0.600480 | 5:+108345076 | None:intergenic |
AACTCGGCGTGAAGGAATCG+TGG | 0.608407 | 5:-108344730 | MsG0580030214.01.T01:CDS |
AACGGAGCGTGTCATTGGTG+GGG | 0.610039 | 5:-108344959 | MsG0580030214.01.T01:CDS |
TTTGCCACCTCCATTTCATG+AGG | 0.614471 | 5:-108345404 | MsG0580030214.01.T01:CDS |
ACATCGTTGTCTGACAGCAT+AGG | 0.615359 | 5:+108344863 | None:intergenic |
CGAAGATGAAGATGTCCCAT+CGG | 0.631309 | 5:-108345116 | MsG0580030214.01.T01:CDS |
AAGACTATATATCTCCAACA+AGG | 0.632936 | 5:+108345075 | None:intergenic |
ACAGACTCATCGGGGCTAGG+AGG | 0.636129 | 5:+108345244 | None:intergenic |
ATGTCATCCTCATGAAATGG+AGG | 0.643543 | 5:+108345397 | None:intergenic |
GACTATATATCTCCAACAAG+GGG | 0.643677 | 5:+108345077 | None:intergenic |
AGGAATGACCACGGATTCCG+CGG | 0.647985 | 5:+108345264 | None:intergenic |
CATACGATCTATCTTCCGAT+GGG | 0.648191 | 5:+108345101 | None:intergenic |
GAGGATACTCGAGATCGAGA+TGG | 0.648976 | 5:-108345038 | MsG0580030214.01.T01:CDS |
CGCTCCGTTCATGTACACTC+CGG | 0.662548 | 5:+108344973 | None:intergenic |
ATCGGGCAAGATAGGCGTAG+AGG | 0.687582 | 5:-108345328 | MsG0580030214.01.T01:CDS |
CCAATGGGACACTCAATGGG+AGG | 0.689455 | 5:+108344680 | None:intergenic |
GGTTCCGGAGTGTACATGAA+CGG | 0.697585 | 5:-108344977 | MsG0580030214.01.T01:CDS |
AATGACCACGGATTCCGCGG+TGG | 0.706555 | 5:+108345267 | None:intergenic |
GTCTTAGAAGTAACTCATGG+AGG | 0.718927 | 5:-108345057 | MsG0580030214.01.T01:CDS |
TCCTAGATGAGAAATGAGTG+CGG | 0.729597 | 5:+108345563 | None:intergenic |
GGGGCTAGGAGGAATGACCA+CGG | 0.746839 | 5:+108345255 | None:intergenic |
AAGGTGGCACAGACTCATCG+GGG | 0.760329 | 5:+108345236 | None:intergenic |
ATTATGGAATCCAGCCACCG+CGG | 0.770355 | 5:-108345281 | MsG0580030214.01.T01:CDS |
AGGAACAGTTCCTATCATGG+CGG | 0.772264 | 5:-108345544 | MsG0580030214.01.T01:CDS |
GTCATTTGACCTGAGCAACG+AGG | 0.784782 | 5:-108344900 | MsG0580030214.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCCATGAAAATTAAAATA+TGG | + | Chr5:108344877-108344896 | None:intergenic | 15.0% |
!! | AATGATTTATATAATTCAAC+AGG | - | Chr5:108345147-108345166 | MsG0580030214.01.T01:CDS | 15.0% |
!! | ATCCATGAAAATTAAAATAT+GGG | + | Chr5:108344876-108344895 | None:intergenic | 15.0% |
!!! | TATTTTAATTTTCATGGATT+TGG | - | Chr5:108344877-108344896 | MsG0580030214.01.T01:CDS | 15.0% |
!!! | AACCCATATTTTAATTTTCA+TGG | - | Chr5:108344871-108344890 | MsG0580030214.01.T01:CDS | 20.0% |
!!! | ACTTTTCACATTTCAATTTT+GGG | - | Chr5:108345324-108345343 | MsG0580030214.01.T01:CDS | 20.0% |
!!! | ATTAATGGTTTTTTCTGTAT+CGG | - | Chr5:108344733-108344752 | MsG0580030214.01.T01:CDS | 20.0% |
!!! | TACTTTTCACATTTCAATTT+TGG | - | Chr5:108345323-108345342 | MsG0580030214.01.T01:CDS | 20.0% |
! | ATATAATTCAACAGGTTGTT+TGG | - | Chr5:108345155-108345174 | MsG0580030214.01.T01:CDS | 25.0% |
! | ATTTGCTTCAAAAGAAAAGA+TGG | - | Chr5:108345441-108345460 | MsG0580030214.01.T01:CDS | 25.0% |
! | CTTTATAATCATCTCTAACA+TGG | + | Chr5:108344909-108344928 | None:intergenic | 25.0% |
! | TACTTATTAATTCCTCCAAT+CGG | + | Chr5:108345570-108345589 | None:intergenic | 25.0% |
! | TGGATCAAACTCTTTATTAT+TGG | - | Chr5:108345369-108345388 | MsG0580030214.01.T01:CDS | 25.0% |
! | TTAGGTACACTTAGTATTAA+TGG | - | Chr5:108344718-108344737 | MsG0580030214.01.T01:CDS | 25.0% |
!!! | TTAATGGTTTTTTCTGTATC+GGG | - | Chr5:108344734-108344753 | MsG0580030214.01.T01:CDS | 25.0% |
AAGACTATATATCTCCAACA+AGG | + | Chr5:108345007-108345026 | None:intergenic | 30.0% | |
ACACATGAATACCATTATCA+TGG | - | Chr5:108344601-108344620 | MsG0580030214.01.T01:CDS | 30.0% | |
ACCAATCTCATCAATTATCT+GGG | + | Chr5:108345493-108345512 | None:intergenic | 30.0% | |
AGACTATATATCTCCAACAA+GGG | + | Chr5:108345006-108345025 | None:intergenic | 30.0% | |
ATAGCTTTCAAGCTGTATTA+TGG | - | Chr5:108344782-108344801 | MsG0580030214.01.T01:CDS | 30.0% | |
TGTAGTCATACAAAGACAAT+TGG | - | Chr5:108345251-108345270 | MsG0580030214.01.T01:CDS | 30.0% | |
TTAAAATATGGGTTCCGATA+AGG | + | Chr5:108344865-108344884 | None:intergenic | 30.0% | |
! | ATAGTCTTAGAAGTAACTCA+TGG | - | Chr5:108345019-108345038 | MsG0580030214.01.T01:CDS | 30.0% |
! | GACATCTCTGTTTATCTTTT+AGG | - | Chr5:108344700-108344719 | MsG0580030214.01.T01:CDS | 30.0% |
!! | ATTGATGAGATTGGTGTTAA+AGG | - | Chr5:108345498-108345517 | MsG0580030214.01.T01:CDS | 30.0% |
!! | ATTTCAATTTTGGGTGAACT+CGG | - | Chr5:108345333-108345352 | MsG0580030214.01.T01:CDS | 30.0% |
AAAGAAAACCTTCTTCCGAT+TGG | - | Chr5:108345552-108345571 | MsG0580030214.01.T01:CDS | 35.0% | |
AATAGAACCTGCCATGATAA+TGG | + | Chr5:108344615-108344634 | None:intergenic | 35.0% | |
AGTCATACAAAGACAATTGG+TGG | - | Chr5:108345254-108345273 | MsG0580030214.01.T01:CDS | 35.0% | |
ATGAATACCATTATCATGGC+AGG | - | Chr5:108344605-108344624 | MsG0580030214.01.T01:CDS | 35.0% | |
CACCAATCTCATCAATTATC+TGG | + | Chr5:108345494-108345513 | None:intergenic | 35.0% | |
GAAAAGATGGTGAACTAGTT+TGG | - | Chr5:108345454-108345473 | MsG0580030214.01.T01:CDS | 35.0% | |
GACTATATATCTCCAACAAG+GGG | + | Chr5:108345005-108345024 | None:intergenic | 35.0% | |
GGCTCATCATAATCACAATT+CGG | + | Chr5:108345075-108345094 | None:intergenic | 35.0% | |
TCCCAGATAATTGATGAGAT+TGG | - | Chr5:108345489-108345508 | MsG0580030214.01.T01:CDS | 35.0% | |
! | CCTATTTTCAAACCTCTCAT+CGG | + | Chr5:108344644-108344663 | None:intergenic | 35.0% |
! | CTATTTTCAAACCTCTCATC+GGG | + | Chr5:108344643-108344662 | None:intergenic | 35.0% |
! | TATTTTCAAACCTCTCATCG+GGG | + | Chr5:108344642-108344661 | None:intergenic | 35.0% |
!! | AGAGAGATTTTGTTGTCAGA+TGG | - | Chr5:108345521-108345540 | MsG0580030214.01.T01:CDS | 35.0% |
!! | GAGAGATTTTGTTGTCAGAT+GGG | - | Chr5:108345522-108345541 | MsG0580030214.01.T01:CDS | 35.0% |
AAATATGGGTTCCGATAAGG+TGG | + | Chr5:108344862-108344881 | None:intergenic | 40.0% | |
ATGTCATCCTCATGAAATGG+AGG | + | Chr5:108344685-108344704 | None:intergenic | 40.0% | |
CATACGATCTATCTTCCGAT+GGG | + | Chr5:108344981-108345000 | None:intergenic | 40.0% | |
CCGATGAGAGGTTTGAAAAT+AGG | - | Chr5:108344641-108344660 | MsG0580030214.01.T01:CDS | 40.0% | |
GAGATGTCATCCTCATGAAA+TGG | + | Chr5:108344688-108344707 | None:intergenic | 40.0% | |
GTCTTAGAAGTAACTCATGG+AGG | - | Chr5:108345022-108345041 | MsG0580030214.01.T01:CDS | 40.0% | |
TAATTCCTCCAATCGGAAGA+AGG | + | Chr5:108345563-108345582 | None:intergenic | 40.0% | |
TCATACGATCTATCTTCCGA+TGG | + | Chr5:108344982-108345001 | None:intergenic | 40.0% | |
TCCTAGATGAGAAATGAGTG+CGG | + | Chr5:108344519-108344538 | None:intergenic | 40.0% | |
TCTAGGAACAGTTCCTATCA+TGG | - | Chr5:108344532-108344551 | MsG0580030214.01.T01:CDS | 40.0% | |
! | TTTTCTGTATCGGGCAAGAT+AGG | - | Chr5:108344743-108344762 | MsG0580030214.01.T01:CDS | 40.0% |
AACTCCAATGGGACACTCAA+TGG | + | Chr5:108345406-108345425 | None:intergenic | 45.0% | |
ACATCGTTGTCTGACAGCAT+AGG | + | Chr5:108345219-108345238 | None:intergenic | 45.0% | |
ACTCCAATGGGACACTCAAT+GGG | + | Chr5:108345405-108345424 | None:intergenic | 45.0% | |
AGGAACAGTTCCTATCATGG+CGG | - | Chr5:108344535-108344554 | MsG0580030214.01.T01:CDS | 45.0% | |
ATAAGGTGGCACAGACTCAT+CGG | + | Chr5:108344848-108344867 | None:intergenic | 45.0% | |
ATGAGTCTGTGCCACCTTAT+CGG | - | Chr5:108344848-108344867 | MsG0580030214.01.T01:CDS | 45.0% | |
ATTGAGTGTCCCATTGGAGT+TGG | - | Chr5:108345405-108345424 | MsG0580030214.01.T01:CDS | 45.0% | |
CCTTTCTTCCCAACTCCAAT+GGG | + | Chr5:108345417-108345436 | None:intergenic | 45.0% | |
CGAAGATGAAGATGTCCCAT+CGG | - | Chr5:108344963-108344982 | MsG0580030214.01.T01:CDS | 45.0% | |
GAAAACCTTCTTCCGATTGG+AGG | - | Chr5:108345555-108345574 | MsG0580030214.01.T01:CDS | 45.0% | |
GATTATGATGAGCCAGTGAC+CGG | - | Chr5:108345081-108345100 | MsG0580030214.01.T01:CDS | 45.0% | |
TAGATCGTATGACCCCTTGT+TGG | - | Chr5:108344990-108345009 | MsG0580030214.01.T01:CDS | 45.0% | |
TCATCCTCATGAAATGGAGG+TGG | + | Chr5:108344682-108344701 | None:intergenic | 45.0% | |
TCATGTGTCTCAGTCAGTTC+AGG | + | Chr5:108344589-108344608 | None:intergenic | 45.0% | |
TCCGCACTCATTTCTCATCT+AGG | - | Chr5:108344515-108344534 | MsG0580030214.01.T01:CDS | 45.0% | |
TGGGACATCTTCATCTTCGT+CGG | + | Chr5:108344962-108344981 | None:intergenic | 45.0% | |
TTGAGTGTCCCATTGGAGTT+GGG | - | Chr5:108345406-108345425 | MsG0580030214.01.T01:CDS | 45.0% | |
TTTGCCACCTCCATTTCATG+AGG | - | Chr5:108344675-108344694 | MsG0580030214.01.T01:CDS | 45.0% | |
! | CTTCATCTTCGTCGGTTGTA+GGG | + | Chr5:108344954-108344973 | None:intergenic | 45.0% |
! | TCTTCATCTTCGTCGGTTGT+AGG | + | Chr5:108344955-108344974 | None:intergenic | 45.0% |
AACAGTTCCTATCATGGCGG+TGG | - | Chr5:108344538-108344557 | MsG0580030214.01.T01:CDS | 50.0% | |
ACATGAACGGAGCGTGTCAT+TGG | - | Chr5:108345115-108345134 | MsG0580030214.01.T01:CDS | 50.0% | |
ATTATGGAATCCAGCCACCG+CGG | - | Chr5:108344798-108344817 | MsG0580030214.01.T01:CDS | 50.0% | |
CCCATTGGAGTTGGGAAGAA+AGG | - | Chr5:108345414-108345433 | MsG0580030214.01.T01:CDS | 50.0% | |
GAGGATACTCGAGATCGAGA+TGG | - | Chr5:108345041-108345060 | MsG0580030214.01.T01:CDS | 50.0% | |
GCAAGATAGGCGTAGAGGAA+TGG | - | Chr5:108344756-108344775 | MsG0580030214.01.T01:CDS | 50.0% | |
GCCTTTCTTCCCAACTCCAA+TGG | + | Chr5:108345418-108345437 | None:intergenic | 50.0% | |
GGTTCCGGAGTGTACATGAA+CGG | - | Chr5:108345102-108345121 | MsG0580030214.01.T01:CDS | 50.0% | |
GTCATTTGACCTGAGCAACG+AGG | - | Chr5:108345179-108345198 | MsG0580030214.01.T01:CDS | 50.0% | |
GTTCATGTACACTCCGGAAC+CGG | + | Chr5:108345103-108345122 | None:intergenic | 50.0% | |
TAAGGTGGCACAGACTCATC+GGG | + | Chr5:108344847-108344866 | None:intergenic | 50.0% | |
TAGACAACACCTCGTTGCTC+AGG | + | Chr5:108345191-108345210 | None:intergenic | 50.0% | |
TCTATTTGCTCCCCGATGAG+AGG | - | Chr5:108344629-108344648 | MsG0580030214.01.T01:CDS | 50.0% | |
AACTCGGCGTGAAGGAATCG+TGG | - | Chr5:108345349-108345368 | MsG0580030214.01.T01:CDS | 55.0% | |
AAGGTGGCACAGACTCATCG+GGG | + | Chr5:108344846-108344865 | None:intergenic | 55.0% | |
AGGAATGACCACGGATTCCG+CGG | + | Chr5:108344818-108344837 | None:intergenic | 55.0% | |
ATCGGGCAAGATAGGCGTAG+AGG | - | Chr5:108344751-108344770 | MsG0580030214.01.T01:CDS | 55.0% | |
CCAATGGGACACTCAATGGG+AGG | + | Chr5:108345402-108345421 | None:intergenic | 55.0% | |
CCTCCCATTGAGTGTCCCAT+TGG | - | Chr5:108345399-108345418 | MsG0580030214.01.T01:CDS | 55.0% | |
CGCTCCGTTCATGTACACTC+CGG | + | Chr5:108345109-108345128 | None:intergenic | 55.0% | |
CGTATCACCACCGCCATGAT+AGG | + | Chr5:108344548-108344567 | None:intergenic | 55.0% | |
TTTGGGTGAACTCGGCGTGA+AGG | - | Chr5:108345341-108345360 | MsG0580030214.01.T01:CDS | 55.0% | |
! | AACGGAGCGTGTCATTGGTG+GGG | - | Chr5:108345120-108345139 | MsG0580030214.01.T01:CDS | 55.0% |
! | GAACGGAGCGTGTCATTGGT+GGG | - | Chr5:108345119-108345138 | MsG0580030214.01.T01:CDS | 55.0% |
! | GGACACTCAATGGGAGGCAT+CGG | + | Chr5:108345396-108345415 | None:intergenic | 55.0% |
! | TGAACGGAGCGTGTCATTGG+TGG | - | Chr5:108345118-108345137 | MsG0580030214.01.T01:CDS | 55.0% |
AATGACCACGGATTCCGCGG+TGG | + | Chr5:108344815-108344834 | None:intergenic | 60.0% | |
ACAGACTCATCGGGGCTAGG+AGG | + | Chr5:108344838-108344857 | None:intergenic | 60.0% | |
GGGGCTAGGAGGAATGACCA+CGG | + | Chr5:108344827-108344846 | None:intergenic | 60.0% | |
TACACTCCGGAACCGGTCAC+TGG | + | Chr5:108345096-108345115 | None:intergenic | 60.0% | |
! | GATGAGCCAGTGACCGGTTC+CGG | - | Chr5:108345087-108345106 | MsG0580030214.01.T01:CDS | 60.0% |
GGCACAGACTCATCGGGGCT+AGG | + | Chr5:108344841-108344860 | None:intergenic | 65.0% | |
ACCACGGATTCCGCGGTGGC+TGG | + | Chr5:108344811-108344830 | None:intergenic | 70.0% | |
TCCAGCCACCGCGGAATCCG+TGG | - | Chr5:108344807-108344826 | MsG0580030214.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 108344511 | 108345590 | 108344511 | ID=MsG0580030214.01;Name=MsG0580030214.01 |
Chr5 | mRNA | 108344511 | 108345590 | 108344511 | ID=MsG0580030214.01.T01;Parent=MsG0580030214.01;Name=MsG0580030214.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|359 |
Chr5 | exon | 108344511 | 108345590 | 108344511 | ID=MsG0580030214.01.T01:exon:17723;Parent=MsG0580030214.01.T01 |
Chr5 | CDS | 108344511 | 108345590 | 108344511 | ID=MsG0580030214.01.T01:cds;Parent=MsG0580030214.01.T01 |
Gene Sequence |
Protein sequence |