Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035274.01.T01 | GAU43998.1 | 64.662 | 399 | 129 | 5 | 1 | 389 | 1 | 397 | 3.98E-177 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035274.01.T01 | Q9LU24 | 25.159 | 314 | 182 | 12 | 11 | 319 | 1 | 266 | 1.25E-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035274.01.T01 | A0A2Z6NHK8 | 64.662 | 399 | 129 | 5 | 1 | 389 | 1 | 397 | 1.90e-177 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035274.01.T01 | MTR_0129s0070 | 49.631 | 407 | 170 | 14 | 1 | 385 | 2 | 395 | 4.51e-121 | 357 |
| MsG0680035274.01.T01 | MTR_0129s0120 | 49.105 | 391 | 183 | 10 | 7 | 385 | 9 | 395 | 1.00e-113 | 338 |
| MsG0680035274.01.T01 | MTR_4g117550 | 46.883 | 401 | 168 | 11 | 1 | 385 | 1 | 372 | 1.01e-105 | 316 |
| MsG0680035274.01.T01 | MTR_8g063440 | 47.287 | 387 | 186 | 12 | 6 | 383 | 3 | 380 | 1.71e-105 | 316 |
| MsG0680035274.01.T01 | MTR_5g097330 | 44.913 | 403 | 186 | 13 | 6 | 382 | 7 | 399 | 1.48e-100 | 304 |
| MsG0680035274.01.T01 | MTR_2g038680 | 44.096 | 415 | 186 | 14 | 6 | 385 | 7 | 410 | 5.59e-99 | 300 |
| MsG0680035274.01.T01 | MTR_2g022000 | 44.527 | 402 | 181 | 12 | 1 | 366 | 1 | 396 | 1.13e-98 | 300 |
| MsG0680035274.01.T01 | MTR_6g090180 | 44.963 | 407 | 192 | 14 | 2 | 382 | 34 | 434 | 3.29e-97 | 296 |
| MsG0680035274.01.T01 | MTR_0129s0050 | 45.564 | 417 | 185 | 13 | 1 | 385 | 1 | 407 | 5.57e-96 | 293 |
| MsG0680035274.01.T01 | MTR_1g007450 | 46.825 | 378 | 179 | 9 | 7 | 367 | 4 | 376 | 8.88e-96 | 293 |
| MsG0680035274.01.T01 | MTR_4g102410 | 43.269 | 416 | 193 | 13 | 1 | 384 | 44 | 448 | 1.06e-95 | 293 |
| MsG0680035274.01.T01 | MTR_5g097220 | 43.160 | 424 | 189 | 15 | 1 | 387 | 1 | 409 | 3.99e-94 | 288 |
| MsG0680035274.01.T01 | MTR_6g086825 | 44.499 | 409 | 192 | 12 | 6 | 385 | 57 | 459 | 4.75e-94 | 289 |
| MsG0680035274.01.T01 | MTR_2g021800 | 42.579 | 411 | 198 | 11 | 1 | 377 | 1 | 407 | 9.50e-94 | 287 |
| MsG0680035274.01.T01 | MTR_8g464770 | 43.968 | 373 | 196 | 9 | 10 | 377 | 7 | 371 | 1.95e-93 | 285 |
| MsG0680035274.01.T01 | MTR_2g104340 | 44.203 | 414 | 187 | 14 | 1 | 387 | 1 | 397 | 3.58e-93 | 285 |
| MsG0680035274.01.T01 | MTR_6g079810 | 43.584 | 413 | 199 | 10 | 1 | 384 | 54 | 461 | 5.55e-93 | 287 |
| MsG0680035274.01.T01 | MTR_0134s0060 | 43.932 | 412 | 196 | 12 | 6 | 385 | 3 | 411 | 7.46e-92 | 282 |
| MsG0680035274.01.T01 | MTR_2g104280 | 42.822 | 404 | 195 | 10 | 10 | 385 | 9 | 404 | 9.42e-92 | 281 |
| MsG0680035274.01.T01 | MTR_2g021950 | 44.081 | 397 | 203 | 12 | 1 | 382 | 1 | 393 | 9.60e-92 | 281 |
| MsG0680035274.01.T01 | MTR_6g080680 | 45.078 | 386 | 168 | 12 | 1 | 360 | 1 | 368 | 1.80e-91 | 281 |
| MsG0680035274.01.T01 | MTR_0054s0100 | 42.823 | 418 | 195 | 14 | 2 | 387 | 4 | 409 | 2.42e-91 | 281 |
| MsG0680035274.01.T01 | MTR_7g069550 | 43.035 | 402 | 193 | 16 | 9 | 387 | 8 | 396 | 3.30e-91 | 280 |
| MsG0680035274.01.T01 | MTR_2g066170 | 42.494 | 393 | 205 | 11 | 7 | 387 | 4 | 387 | 7.83e-91 | 279 |
| MsG0680035274.01.T01 | MTR_0054s0090 | 43.099 | 413 | 199 | 14 | 2 | 387 | 4 | 407 | 3.58e-90 | 278 |
| MsG0680035274.01.T01 | MTR_8g467670 | 44.094 | 381 | 195 | 12 | 14 | 388 | 13 | 381 | 4.62e-90 | 277 |
| MsG0680035274.01.T01 | MTR_8g012090 | 46.301 | 365 | 145 | 12 | 6 | 356 | 7 | 334 | 1.57e-89 | 273 |
| MsG0680035274.01.T01 | MTR_4g055820 | 45.098 | 357 | 169 | 10 | 9 | 343 | 8 | 359 | 1.85e-89 | 274 |
| MsG0680035274.01.T01 | MTR_6g079770 | 43.062 | 418 | 200 | 14 | 2 | 385 | 3 | 416 | 3.65e-89 | 275 |
| MsG0680035274.01.T01 | MTR_5g096630 | 40.000 | 405 | 212 | 12 | 9 | 385 | 12 | 413 | 4.67e-89 | 275 |
| MsG0680035274.01.T01 | MTR_7g017040 | 43.176 | 403 | 198 | 13 | 6 | 387 | 7 | 399 | 7.35e-89 | 274 |
| MsG0680035274.01.T01 | MTR_7g017130 | 43.350 | 406 | 203 | 14 | 1 | 387 | 1 | 398 | 1.07e-88 | 273 |
| MsG0680035274.01.T01 | MTR_3g011120 | 44.847 | 359 | 184 | 9 | 12 | 366 | 11 | 359 | 1.17e-88 | 273 |
| MsG0680035274.01.T01 | MTR_2g066200 | 41.562 | 397 | 207 | 10 | 6 | 387 | 3 | 389 | 2.17e-88 | 273 |
| MsG0680035274.01.T01 | MTR_8g041270 | 41.527 | 419 | 201 | 13 | 1 | 387 | 1 | 407 | 2.89e-88 | 273 |
| MsG0680035274.01.T01 | MTR_4g028510 | 42.892 | 408 | 203 | 15 | 1 | 385 | 1 | 401 | 3.59e-88 | 274 |
| MsG0680035274.01.T01 | MTR_5g069390 | 42.206 | 417 | 199 | 18 | 3 | 388 | 14 | 419 | 1.02e-87 | 274 |
| MsG0680035274.01.T01 | MTR_2g021770 | 40.640 | 406 | 211 | 11 | 9 | 387 | 6 | 408 | 2.27e-87 | 270 |
| MsG0680035274.01.T01 | MTR_4g014370 | 39.762 | 420 | 200 | 13 | 6 | 385 | 2 | 408 | 2.85e-87 | 270 |
| MsG0680035274.01.T01 | MTR_5g097350 | 44.389 | 401 | 186 | 16 | 1 | 382 | 1 | 383 | 6.55e-87 | 268 |
| MsG0680035274.01.T01 | MTR_8g039500 | 44.444 | 360 | 173 | 11 | 7 | 356 | 4 | 346 | 4.00e-86 | 265 |
| MsG0680035274.01.T01 | MTR_7g017170 | 42.105 | 418 | 203 | 14 | 1 | 387 | 1 | 410 | 4.32e-86 | 267 |
| MsG0680035274.01.T01 | MTR_7g079640 | 43.236 | 377 | 175 | 13 | 4 | 365 | 2 | 354 | 1.25e-85 | 265 |
| MsG0680035274.01.T01 | MTR_4g028680 | 41.912 | 408 | 209 | 15 | 1 | 387 | 1 | 401 | 2.75e-85 | 265 |
| MsG0680035274.01.T01 | MTR_4g130330 | 40.152 | 396 | 208 | 8 | 12 | 386 | 4 | 391 | 2.07e-84 | 262 |
| MsG0680035274.01.T01 | MTR_2g034700 | 45.407 | 381 | 177 | 12 | 4 | 373 | 2 | 362 | 2.53e-84 | 261 |
| MsG0680035274.01.T01 | MTR_5g059430 | 40.941 | 425 | 194 | 17 | 3 | 384 | 14 | 424 | 5.02e-84 | 263 |
| MsG0680035274.01.T01 | MTR_4g028660 | 41.076 | 409 | 200 | 14 | 1 | 382 | 1 | 395 | 1.22e-83 | 261 |
| MsG0680035274.01.T01 | MTR_4g027450 | 41.076 | 409 | 200 | 14 | 1 | 382 | 1 | 395 | 1.22e-83 | 261 |
| MsG0680035274.01.T01 | MTR_5g097680 | 41.026 | 429 | 206 | 15 | 1 | 385 | 1 | 426 | 4.30e-83 | 260 |
| MsG0680035274.01.T01 | MTR_0831s0010 | 41.753 | 388 | 200 | 13 | 12 | 386 | 47 | 421 | 1.22e-82 | 259 |
| MsG0680035274.01.T01 | MTR_1g007410 | 44.125 | 383 | 174 | 13 | 10 | 366 | 17 | 385 | 1.35e-82 | 258 |
| MsG0680035274.01.T01 | MTR_2g065860 | 41.709 | 398 | 205 | 15 | 6 | 387 | 3 | 389 | 2.18e-82 | 257 |
| MsG0680035274.01.T01 | MTR_5g072060 | 44.355 | 372 | 155 | 13 | 13 | 361 | 4 | 346 | 3.43e-82 | 263 |
| MsG0680035274.01.T01 | MTR_8g033140 | 40.046 | 432 | 201 | 15 | 1 | 387 | 1 | 419 | 7.54e-82 | 256 |
| MsG0680035274.01.T01 | MTR_5g037680 | 42.714 | 398 | 181 | 15 | 10 | 380 | 3 | 380 | 1.16e-81 | 257 |
| MsG0680035274.01.T01 | MTR_6g461660 | 42.092 | 392 | 205 | 10 | 7 | 382 | 11 | 396 | 2.49e-81 | 254 |
| MsG0680035274.01.T01 | MTR_5g091140 | 43.045 | 381 | 169 | 13 | 2 | 360 | 35 | 389 | 1.98e-80 | 253 |
| MsG0680035274.01.T01 | MTR_8g046310 | 41.814 | 397 | 187 | 17 | 4 | 381 | 2 | 373 | 6.37e-80 | 250 |
| MsG0680035274.01.T01 | MTR_5g096910 | 41.667 | 408 | 191 | 16 | 4 | 385 | 6 | 392 | 6.95e-80 | 251 |
| MsG0680035274.01.T01 | MTR_2g066150 | 40.712 | 393 | 186 | 13 | 7 | 387 | 4 | 361 | 3.03e-78 | 245 |
| MsG0680035274.01.T01 | MTR_2g064950 | 43.684 | 380 | 170 | 16 | 7 | 360 | 2 | 363 | 3.17e-78 | 246 |
| MsG0680035274.01.T01 | MTR_8g064890 | 39.599 | 399 | 215 | 10 | 1 | 385 | 1 | 387 | 9.66e-78 | 245 |
| MsG0680035274.01.T01 | MTR_1g007430 | 43.827 | 324 | 164 | 8 | 25 | 340 | 6 | 319 | 2.58e-74 | 234 |
| MsG0680035274.01.T01 | MTR_8g063330 | 42.857 | 357 | 177 | 15 | 7 | 345 | 4 | 351 | 3.65e-74 | 238 |
| MsG0680035274.01.T01 | MTR_6g478230 | 39.860 | 429 | 195 | 16 | 1 | 387 | 1 | 408 | 5.02e-74 | 236 |
| MsG0680035274.01.T01 | MTR_8g013000 | 43.417 | 357 | 173 | 16 | 7 | 342 | 2 | 350 | 5.51e-74 | 236 |
| MsG0680035274.01.T01 | MTR_7g111700 | 39.659 | 411 | 179 | 14 | 1 | 387 | 1 | 366 | 3.11e-73 | 233 |
| MsG0680035274.01.T01 | MTR_2g065840 | 39.401 | 401 | 209 | 17 | 6 | 386 | 3 | 389 | 3.95e-73 | 233 |
| MsG0680035274.01.T01 | MTR_5g024260 | 41.026 | 390 | 197 | 16 | 1 | 367 | 7 | 386 | 8.38e-73 | 233 |
| MsG0680035274.01.T01 | MTR_1g053510 | 39.706 | 408 | 207 | 14 | 4 | 381 | 3 | 401 | 2.49e-72 | 232 |
| MsG0680035274.01.T01 | MTR_4g028750 | 40.000 | 375 | 187 | 13 | 9 | 359 | 10 | 370 | 4.00e-72 | 231 |
| MsG0680035274.01.T01 | MTR_8g046200 | 38.568 | 433 | 191 | 20 | 4 | 381 | 5 | 417 | 3.21e-71 | 229 |
| MsG0680035274.01.T01 | MTR_1g050308 | 38.677 | 393 | 170 | 12 | 2 | 387 | 20 | 348 | 3.20e-70 | 224 |
| MsG0680035274.01.T01 | MTR_5g092850 | 38.177 | 406 | 192 | 16 | 14 | 382 | 15 | 398 | 2.10e-68 | 221 |
| MsG0680035274.01.T01 | MTR_5g074800 | 41.504 | 359 | 167 | 15 | 54 | 387 | 1 | 341 | 2.73e-68 | 219 |
| MsG0680035274.01.T01 | MTR_8g033090 | 38.955 | 421 | 190 | 19 | 12 | 385 | 11 | 411 | 1.29e-67 | 219 |
| MsG0680035274.01.T01 | MTR_5g074850 | 40.452 | 398 | 170 | 17 | 4 | 359 | 24 | 396 | 2.68e-67 | 229 |
| MsG0680035274.01.T01 | MTR_8g046220 | 37.046 | 413 | 190 | 16 | 13 | 381 | 15 | 401 | 6.72e-67 | 218 |
| MsG0680035274.01.T01 | MTR_8g036970 | 39.776 | 357 | 147 | 11 | 21 | 366 | 4 | 303 | 8.49e-67 | 216 |
| MsG0680035274.01.T01 | MTR_8g032980 | 37.412 | 425 | 202 | 14 | 9 | 383 | 8 | 418 | 1.42e-66 | 217 |
| MsG0680035274.01.T01 | MTR_5g096900 | 44.000 | 325 | 140 | 11 | 10 | 310 | 7 | 313 | 5.08e-66 | 213 |
| MsG0680035274.01.T01 | MTR_1g098180 | 38.272 | 405 | 178 | 16 | 4 | 383 | 6 | 363 | 8.52e-66 | 214 |
| MsG0680035274.01.T01 | MTR_8g064790 | 35.897 | 390 | 191 | 8 | 1 | 385 | 1 | 336 | 2.36e-65 | 211 |
| MsG0680035274.01.T01 | MTR_7g016930 | 44.343 | 327 | 139 | 15 | 6 | 318 | 7 | 304 | 4.97e-65 | 211 |
| MsG0680035274.01.T01 | MTR_4g014370 | 35.787 | 394 | 179 | 12 | 1 | 385 | 8 | 336 | 7.77e-65 | 210 |
| MsG0680035274.01.T01 | MTR_4g007940 | 40.615 | 325 | 162 | 11 | 66 | 366 | 4 | 321 | 5.25e-64 | 208 |
| MsG0680035274.01.T01 | MTR_8g033110 | 38.876 | 427 | 202 | 20 | 4 | 385 | 2 | 414 | 7.41e-64 | 210 |
| MsG0680035274.01.T01 | MTR_5g092860 | 42.017 | 357 | 146 | 15 | 34 | 360 | 21 | 346 | 8.39e-64 | 208 |
| MsG0680035274.01.T01 | MTR_8g018110 | 36.165 | 412 | 216 | 10 | 4 | 385 | 2 | 396 | 2.94e-63 | 208 |
| MsG0680035274.01.T01 | MTR_6g090250 | 38.265 | 392 | 194 | 12 | 35 | 381 | 31 | 419 | 2.99e-63 | 209 |
| MsG0680035274.01.T01 | MTR_5g022850 | 36.842 | 399 | 176 | 13 | 10 | 387 | 11 | 354 | 5.70e-63 | 206 |
| MsG0680035274.01.T01 | MTR_5g075370 | 39.186 | 393 | 169 | 18 | 12 | 359 | 5 | 372 | 1.12e-60 | 209 |
| MsG0680035274.01.T01 | MTR_6g078010 | 39.655 | 348 | 174 | 13 | 52 | 381 | 1 | 330 | 1.61e-60 | 199 |
| MsG0680035274.01.T01 | MTR_5g064700 | 36.559 | 372 | 191 | 14 | 54 | 385 | 1 | 367 | 1.92e-57 | 192 |
| MsG0680035274.01.T01 | MTR_5g086590 | 46.053 | 228 | 111 | 7 | 135 | 359 | 13 | 231 | 7.45e-56 | 184 |
| MsG0680035274.01.T01 | MTR_8g063370 | 37.604 | 359 | 197 | 11 | 13 | 360 | 22 | 364 | 3.53e-55 | 187 |
| MsG0680035274.01.T01 | MTR_5g076490 | 38.736 | 364 | 166 | 12 | 52 | 386 | 1 | 336 | 1.49e-54 | 183 |
| MsG0680035274.01.T01 | MTR_7g104710 | 40.129 | 309 | 138 | 9 | 6 | 299 | 8 | 284 | 1.80e-54 | 182 |
| MsG0680035274.01.T01 | MTR_6g079790 | 41.156 | 294 | 139 | 11 | 121 | 387 | 24 | 310 | 6.08e-53 | 178 |
| MsG0680035274.01.T01 | MTR_2g021920 | 45.532 | 235 | 105 | 8 | 169 | 382 | 37 | 269 | 6.27e-53 | 177 |
| MsG0680035274.01.T01 | MTR_6g070880 | 42.972 | 249 | 117 | 8 | 1 | 227 | 15 | 260 | 2.99e-51 | 172 |
| MsG0680035274.01.T01 | MTR_6g071420 | 42.972 | 249 | 117 | 8 | 1 | 227 | 15 | 260 | 2.99e-51 | 172 |
| MsG0680035274.01.T01 | MTR_1g050312 | 39.677 | 310 | 148 | 13 | 78 | 377 | 8 | 288 | 3.90e-51 | 173 |
| MsG0680035274.01.T01 | MTR_8g063310 | 32.323 | 396 | 230 | 13 | 3 | 377 | 10 | 388 | 8.62e-49 | 170 |
| MsG0680035274.01.T01 | MTR_6g087620 | 37.201 | 293 | 131 | 10 | 87 | 359 | 1 | 260 | 1.65e-48 | 166 |
| MsG0680035274.01.T01 | MTR_5g068490 | 36.149 | 296 | 160 | 10 | 96 | 387 | 8 | 278 | 1.64e-47 | 163 |
| MsG0680035274.01.T01 | MTR_8g033000 | 33.681 | 383 | 186 | 13 | 52 | 386 | 1 | 363 | 6.70e-47 | 164 |
| MsG0680035274.01.T01 | MTR_1g076810 | 43.590 | 234 | 121 | 5 | 1 | 227 | 1 | 230 | 9.37e-47 | 169 |
| MsG0680035274.01.T01 | MTR_5g043605 | 31.683 | 404 | 188 | 11 | 6 | 390 | 16 | 350 | 1.41e-46 | 163 |
| MsG0680035274.01.T01 | MTR_5g097820 | 40.316 | 253 | 130 | 9 | 3 | 242 | 9 | 253 | 2.60e-45 | 157 |
| MsG0680035274.01.T01 | MTR_8g063350 | 34.232 | 371 | 169 | 12 | 7 | 360 | 6 | 318 | 4.19e-45 | 159 |
| MsG0680035274.01.T01 | MTR_6g004450 | 37.681 | 276 | 145 | 7 | 129 | 385 | 1 | 268 | 8.95e-45 | 156 |
| MsG0680035274.01.T01 | MTR_7g023800 | 33.333 | 342 | 174 | 9 | 54 | 379 | 1 | 304 | 1.34e-44 | 156 |
| MsG0680035274.01.T01 | MTR_8g073570 | 48.571 | 175 | 81 | 6 | 7 | 179 | 2 | 169 | 1.57e-44 | 152 |
| MsG0680035274.01.T01 | MTR_5g094350 | 37.906 | 277 | 137 | 8 | 11 | 266 | 9 | 271 | 3.78e-44 | 154 |
| MsG0680035274.01.T01 | MTR_5g097850 | 45.455 | 187 | 85 | 5 | 211 | 385 | 63 | 244 | 1.22e-43 | 152 |
| MsG0680035274.01.T01 | MTR_2g104260 | 38.989 | 277 | 135 | 10 | 9 | 260 | 8 | 275 | 7.82e-43 | 151 |
| MsG0680035274.01.T01 | MTR_5g098950 | 42.254 | 213 | 85 | 5 | 137 | 342 | 90 | 271 | 1.52e-42 | 150 |
| MsG0680035274.01.T01 | MTR_4g016000 | 44.660 | 206 | 89 | 8 | 140 | 337 | 2 | 190 | 5.32e-42 | 147 |
| MsG0680035274.01.T01 | MTR_6g465360 | 45.854 | 205 | 95 | 7 | 6 | 198 | 53 | 253 | 1.26e-41 | 148 |
| MsG0680035274.01.T01 | MTR_7g019250 | 44.144 | 222 | 98 | 6 | 149 | 361 | 206 | 410 | 4.04e-41 | 151 |
| MsG0680035274.01.T01 | MTR_6g090260 | 44.086 | 186 | 93 | 5 | 206 | 381 | 75 | 259 | 5.24e-41 | 145 |
| MsG0680035274.01.T01 | MTR_6g090260 | 56.522 | 69 | 25 | 2 | 1 | 64 | 1 | 69 | 1.11e-13 | 70.9 |
| MsG0680035274.01.T01 | MTR_5g023970 | 41.237 | 194 | 102 | 7 | 199 | 385 | 7 | 195 | 1.16e-38 | 137 |
| MsG0680035274.01.T01 | MTR_5g037190 | 37.091 | 275 | 129 | 10 | 1 | 256 | 1 | 250 | 3.49e-38 | 138 |
| MsG0680035274.01.T01 | MTR_6g009350 | 40.609 | 197 | 93 | 6 | 169 | 350 | 8 | 195 | 1.66e-36 | 132 |
| MsG0680035274.01.T01 | MTR_8g035690 | 38.628 | 277 | 121 | 12 | 146 | 385 | 38 | 302 | 6.59e-36 | 133 |
| MsG0680035274.01.T01 | MTR_1g115205 | 38.281 | 256 | 109 | 10 | 1 | 243 | 17 | 236 | 1.84e-35 | 131 |
| MsG0680035274.01.T01 | MTR_3g018750 | 37.449 | 243 | 117 | 8 | 168 | 382 | 2 | 237 | 2.47e-35 | 130 |
| MsG0680035274.01.T01 | MTR_5g066420 | 49.242 | 132 | 64 | 3 | 246 | 375 | 19 | 149 | 5.02e-33 | 121 |
| MsG0680035274.01.T01 | MTR_7g101200 | 35.586 | 222 | 104 | 10 | 133 | 344 | 36 | 228 | 7.49e-30 | 115 |
| MsG0680035274.01.T01 | MTR_3g030620 | 41.358 | 162 | 82 | 7 | 234 | 384 | 21 | 180 | 1.59e-27 | 107 |
| MsG0680035274.01.T01 | MTR_5g096920 | 43.791 | 153 | 77 | 6 | 237 | 384 | 2 | 150 | 1.71e-27 | 106 |
| MsG0680035274.01.T01 | MTR_7g017150 | 39.086 | 197 | 105 | 7 | 201 | 387 | 77 | 268 | 2.89e-26 | 106 |
| MsG0680035274.01.T01 | MTR_5g097660 | 50.877 | 114 | 53 | 3 | 271 | 382 | 4 | 116 | 4.63e-26 | 101 |
| MsG0680035274.01.T01 | MTR_1g047080 | 30.484 | 351 | 162 | 18 | 52 | 387 | 1 | 284 | 4.65e-26 | 106 |
| MsG0680035274.01.T01 | MTR_5g091150 | 35.321 | 218 | 82 | 9 | 99 | 292 | 2 | 184 | 6.56e-26 | 103 |
| MsG0680035274.01.T01 | MTR_7g017120 | 39.594 | 197 | 104 | 8 | 201 | 387 | 76 | 267 | 1.02e-25 | 105 |
| MsG0680035274.01.T01 | MTR_5g096070 | 42.197 | 173 | 63 | 8 | 9 | 177 | 20 | 159 | 4.79e-25 | 100 |
| MsG0680035274.01.T01 | MTR_6g079730 | 44.444 | 135 | 71 | 3 | 249 | 381 | 13 | 145 | 1.17e-24 | 99.0 |
| MsG0680035274.01.T01 | MTR_3g019290 | 34.722 | 216 | 94 | 7 | 4 | 212 | 3 | 178 | 3.31e-24 | 98.6 |
| MsG0680035274.01.T01 | MTR_5g097540 | 39.634 | 164 | 86 | 6 | 206 | 361 | 97 | 255 | 4.89e-24 | 101 |
| MsG0680035274.01.T01 | MTR_2g022020 | 40.678 | 118 | 68 | 2 | 265 | 382 | 1 | 116 | 2.99e-23 | 94.0 |
| MsG0680035274.01.T01 | MTR_4g116330 | 25.381 | 394 | 249 | 12 | 5 | 384 | 13 | 375 | 3.51e-22 | 97.4 |
| MsG0680035274.01.T01 | MTR_5g097650 | 40.506 | 158 | 80 | 5 | 4 | 158 | 9 | 155 | 5.60e-22 | 92.0 |
| MsG0680035274.01.T01 | MTR_2g021150 | 28.076 | 317 | 193 | 14 | 15 | 322 | 14 | 304 | 8.79e-22 | 96.3 |
| MsG0680035274.01.T01 | MTR_2g028130 | 26.627 | 338 | 201 | 13 | 11 | 323 | 1 | 316 | 1.65e-21 | 95.9 |
| MsG0680035274.01.T01 | MTR_2g425980 | 25.134 | 374 | 236 | 12 | 11 | 359 | 1 | 355 | 1.73e-21 | 95.9 |
| MsG0680035274.01.T01 | MTR_2g028140 | 25.970 | 335 | 211 | 12 | 11 | 322 | 1 | 321 | 6.99e-21 | 94.0 |
| MsG0680035274.01.T01 | MTR_2g021050 | 24.737 | 380 | 210 | 15 | 15 | 367 | 5 | 335 | 8.60e-21 | 93.6 |
| MsG0680035274.01.T01 | MTR_3g047580 | 38.129 | 139 | 63 | 3 | 12 | 149 | 11 | 127 | 2.75e-20 | 86.3 |
| MsG0680035274.01.T01 | MTR_1g094210 | 26.098 | 387 | 224 | 17 | 15 | 382 | 57 | 400 | 5.89e-20 | 91.3 |
| MsG0680035274.01.T01 | MTR_0667s0010 | 26.205 | 332 | 198 | 14 | 11 | 322 | 2 | 306 | 6.02e-20 | 91.3 |
| MsG0680035274.01.T01 | MTR_2g028110 | 25.691 | 362 | 225 | 15 | 15 | 360 | 4 | 337 | 7.33e-20 | 90.5 |
| MsG0680035274.01.T01 | MTR_5g096050 | 44.231 | 104 | 42 | 2 | 237 | 325 | 2 | 104 | 8.38e-20 | 84.7 |
| MsG0680035274.01.T01 | MTR_2g031720 | 25.815 | 368 | 223 | 16 | 15 | 366 | 6 | 339 | 1.01e-19 | 90.5 |
| MsG0680035274.01.T01 | MTR_5g086780 | 45.370 | 108 | 55 | 2 | 252 | 359 | 121 | 224 | 1.13e-19 | 87.4 |
| MsG0680035274.01.T01 | MTR_5g086780 | 56.579 | 76 | 28 | 2 | 1 | 75 | 1 | 72 | 4.04e-12 | 65.9 |
| MsG0680035274.01.T01 | MTR_4g021785 | 26.075 | 372 | 200 | 17 | 14 | 361 | 8 | 328 | 2.23e-19 | 89.0 |
| MsG0680035274.01.T01 | MTR_5g036250 | 52.439 | 82 | 39 | 0 | 296 | 377 | 21 | 102 | 2.38e-19 | 85.5 |
| MsG0680035274.01.T01 | MTR_1g094210 | 26.301 | 365 | 208 | 16 | 15 | 361 | 57 | 378 | 2.44e-19 | 89.4 |
| MsG0680035274.01.T01 | MTR_3g034160 | 26.733 | 404 | 232 | 17 | 9 | 384 | 3 | 370 | 5.10e-19 | 88.2 |
| MsG0680035274.01.T01 | MTR_3g034180 | 26.440 | 382 | 222 | 16 | 5 | 361 | 113 | 460 | 5.43e-19 | 89.0 |
| MsG0680035274.01.T01 | MTR_0129s0110 | 56.410 | 78 | 16 | 1 | 73 | 150 | 1 | 60 | 6.50e-19 | 82.0 |
| MsG0680035274.01.T01 | MTR_5g097210 | 25.304 | 411 | 221 | 17 | 9 | 386 | 3 | 360 | 6.58e-19 | 87.8 |
| MsG0680035274.01.T01 | MTR_8g041440 | 42.520 | 127 | 47 | 3 | 1 | 119 | 1 | 109 | 7.04e-19 | 82.0 |
| MsG0680035274.01.T01 | MTR_2g426070 | 24.728 | 368 | 237 | 13 | 16 | 360 | 7 | 357 | 1.01e-18 | 87.4 |
| MsG0680035274.01.T01 | MTR_2g028160 | 25.217 | 345 | 197 | 14 | 11 | 322 | 1 | 317 | 2.99e-18 | 86.3 |
| MsG0680035274.01.T01 | MTR_4g116330 | 23.590 | 390 | 222 | 11 | 5 | 384 | 13 | 336 | 4.68e-18 | 84.7 |
| MsG0680035274.01.T01 | MTR_4g023090 | 27.143 | 350 | 217 | 13 | 1 | 340 | 2 | 323 | 5.86e-18 | 85.1 |
| MsG0680035274.01.T01 | MTR_3g034130 | 26.203 | 374 | 224 | 15 | 10 | 361 | 4 | 347 | 1.89e-17 | 83.6 |
| MsG0680035274.01.T01 | MTR_2g024110 | 23.716 | 409 | 241 | 19 | 15 | 389 | 4 | 375 | 1.91e-17 | 83.6 |
| MsG0680035274.01.T01 | MTR_4g023080 | 23.929 | 397 | 231 | 16 | 9 | 384 | 3 | 349 | 3.19e-17 | 82.8 |
| MsG0680035274.01.T01 | MTR_4g133170 | 25.000 | 376 | 220 | 17 | 15 | 367 | 4 | 340 | 4.14e-17 | 82.8 |
| MsG0680035274.01.T01 | MTR_1g037540 | 24.868 | 378 | 217 | 18 | 18 | 350 | 8 | 363 | 5.95e-17 | 82.4 |
| MsG0680035274.01.T01 | MTR_1g068835 | 24.119 | 369 | 232 | 15 | 15 | 367 | 4 | 340 | 7.04e-17 | 82.0 |
| MsG0680035274.01.T01 | MTR_1g054725 | 25.989 | 354 | 207 | 19 | 13 | 350 | 18 | 332 | 4.37e-16 | 79.3 |
| MsG0680035274.01.T01 | MTR_4g094365 | 25.191 | 393 | 234 | 16 | 14 | 384 | 7 | 361 | 2.55e-15 | 77.0 |
| MsG0680035274.01.T01 | MTR_3g010590 | 25.080 | 311 | 191 | 10 | 15 | 322 | 39 | 310 | 3.89e-15 | 76.6 |
| MsG0680035274.01.T01 | MTR_1g009110 | 26.000 | 350 | 217 | 14 | 18 | 350 | 17 | 341 | 4.06e-15 | 76.6 |
| MsG0680035274.01.T01 | MTR_2g031680 | 26.276 | 392 | 232 | 21 | 11 | 381 | 2 | 357 | 6.80e-15 | 75.9 |
| MsG0680035274.01.T01 | MTR_1g050305 | 52.874 | 87 | 35 | 3 | 287 | 368 | 21 | 106 | 7.40e-15 | 71.6 |
| MsG0680035274.01.T01 | MTR_1g055135 | 26.221 | 389 | 231 | 16 | 14 | 380 | 12 | 366 | 8.75e-15 | 75.5 |
| MsG0680035274.01.T01 | MTR_1g097560 | 23.607 | 377 | 246 | 13 | 12 | 381 | 33 | 374 | 1.29e-14 | 75.1 |
| MsG0680035274.01.T01 | MTR_2g426090 | 25.519 | 337 | 208 | 15 | 15 | 332 | 7 | 319 | 2.15e-14 | 74.7 |
| MsG0680035274.01.T01 | MTR_2g426020 | 23.692 | 325 | 216 | 9 | 11 | 322 | 2 | 307 | 2.92e-14 | 74.3 |
| MsG0680035274.01.T01 | MTR_8g032390 | 23.367 | 398 | 232 | 16 | 4 | 384 | 29 | 370 | 5.60e-14 | 73.2 |
| MsG0680035274.01.T01 | MTR_3g047540 | 45.455 | 66 | 34 | 1 | 204 | 267 | 4 | 69 | 5.97e-14 | 67.4 |
| MsG0680035274.01.T01 | MTR_6g060650 | 25.700 | 393 | 245 | 15 | 9 | 382 | 2 | 366 | 1.66e-13 | 71.6 |
| MsG0680035274.01.T01 | MTR_4g109280 | 26.685 | 371 | 208 | 16 | 13 | 363 | 6 | 332 | 2.63e-13 | 70.9 |
| MsG0680035274.01.T01 | MTR_7g056710 | 21.795 | 390 | 218 | 13 | 1 | 348 | 4 | 348 | 1.18e-12 | 69.3 |
| MsG0680035274.01.T01 | MTR_2g029990 | 24.719 | 356 | 216 | 15 | 16 | 353 | 52 | 373 | 1.42e-12 | 68.9 |
| MsG0680035274.01.T01 | MTR_4g109270 | 24.931 | 361 | 220 | 17 | 15 | 359 | 8 | 333 | 1.55e-12 | 68.6 |
| MsG0680035274.01.T01 | MTR_4g094400 | 38.095 | 105 | 46 | 3 | 234 | 320 | 8 | 111 | 2.14e-12 | 64.3 |
| MsG0680035274.01.T01 | MTR_3g097190 | 57.407 | 54 | 23 | 0 | 307 | 360 | 28 | 81 | 2.31e-12 | 65.5 |
| MsG0680035274.01.T01 | MTR_2g055970 | 25.385 | 390 | 229 | 19 | 1 | 369 | 197 | 545 | 2.86e-12 | 68.6 |
| MsG0680035274.01.T01 | MTR_2g024100 | 25.237 | 317 | 185 | 11 | 29 | 321 | 21 | 309 | 3.07e-12 | 68.2 |
| MsG0680035274.01.T01 | MTR_6g065980 | 24.847 | 326 | 178 | 13 | 12 | 322 | 13 | 286 | 3.46e-12 | 67.8 |
| MsG0680035274.01.T01 | MTR_2g021155 | 25.566 | 309 | 196 | 11 | 18 | 320 | 39 | 319 | 5.67e-12 | 67.8 |
| MsG0680035274.01.T01 | MTR_3g083640 | 24.863 | 366 | 219 | 12 | 1 | 350 | 35 | 360 | 6.79e-12 | 67.0 |
| MsG0680035274.01.T01 | MTR_5g027370 | 22.930 | 314 | 201 | 11 | 26 | 320 | 40 | 331 | 7.22e-12 | 67.0 |
| MsG0680035274.01.T01 | MTR_2g046920 | 22.699 | 326 | 205 | 14 | 15 | 329 | 24 | 313 | 8.37e-12 | 66.6 |
| MsG0680035274.01.T01 | MTR_2g025960 | 28.507 | 221 | 128 | 10 | 117 | 322 | 10 | 215 | 8.55e-12 | 65.9 |
| MsG0680035274.01.T01 | MTR_5g027330 | 22.930 | 314 | 201 | 11 | 26 | 320 | 51 | 342 | 1.03e-11 | 66.6 |
| MsG0680035274.01.T01 | MTR_3g030240 | 23.151 | 311 | 194 | 10 | 15 | 322 | 40 | 308 | 1.07e-11 | 66.2 |
| MsG0680035274.01.T01 | MTR_0044s0300 | 23.143 | 350 | 211 | 15 | 15 | 350 | 38 | 343 | 1.30e-11 | 65.9 |
| MsG0680035274.01.T01 | MTR_0115s0020 | 24.332 | 374 | 217 | 16 | 14 | 350 | 9 | 353 | 1.50e-11 | 65.9 |
| MsG0680035274.01.T01 | MTR_1g050542 | 22.691 | 379 | 235 | 16 | 15 | 375 | 58 | 396 | 2.01e-11 | 65.5 |
| MsG0680035274.01.T01 | MTR_5g022420 | 23.387 | 372 | 225 | 16 | 4 | 357 | 16 | 345 | 2.09e-11 | 65.5 |
| MsG0680035274.01.T01 | MTR_3g103020 | 22.959 | 392 | 244 | 18 | 14 | 384 | 19 | 373 | 2.63e-11 | 65.1 |
| MsG0680035274.01.T01 | MTR_8g041490 | 33.333 | 135 | 52 | 4 | 1 | 127 | 1 | 105 | 3.22e-11 | 60.1 |
| MsG0680035274.01.T01 | MTR_4g023130 | 23.600 | 250 | 149 | 9 | 125 | 359 | 62 | 284 | 4.21e-11 | 63.9 |
| MsG0680035274.01.T01 | MTR_3g010970 | 23.962 | 313 | 193 | 11 | 18 | 325 | 51 | 323 | 4.55e-11 | 64.3 |
| MsG0680035274.01.T01 | MTR_3g036335 | 22.350 | 349 | 219 | 13 | 15 | 350 | 41 | 350 | 5.16e-11 | 64.3 |
| MsG0680035274.01.T01 | MTR_3g006570 | 22.930 | 314 | 207 | 11 | 15 | 322 | 21 | 305 | 5.32e-11 | 63.9 |
| MsG0680035274.01.T01 | MTR_1g068860 | 24.282 | 383 | 235 | 17 | 15 | 378 | 4 | 350 | 5.54e-11 | 63.9 |
| MsG0680035274.01.T01 | MTR_7g007300 | 24.684 | 316 | 184 | 13 | 15 | 319 | 103 | 375 | 5.63e-11 | 64.3 |
| MsG0680035274.01.T01 | MTR_5g094360 | 41.860 | 86 | 42 | 4 | 145 | 224 | 40 | 123 | 7.59e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035274.01.T01 | AT3G16210 | 25.159 | 314 | 182 | 12 | 11 | 319 | 1 | 266 | 1.27e-15 | 78.2 |
| MsG0680035274.01.T01 | AT3G06240 | 23.544 | 412 | 211 | 18 | 15 | 367 | 36 | 402 | 7.35e-14 | 73.2 |
| MsG0680035274.01.T01 | AT2G40925 | 26.019 | 319 | 202 | 13 | 14 | 322 | 26 | 320 | 2.13e-13 | 71.6 |
Find 85 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGCATTCAAGGTGTATT+TGG | 0.182099 | 6:+101353004 | MsG0680035274.01.T01:CDS |
| TTATATGTGCATGATTATTT+TGG | 0.185546 | 6:+101352719 | MsG0680035274.01.T01:CDS |
| TGATCAAAGTTTATATATAT+TGG | 0.214488 | 6:+101352250 | MsG0680035274.01.T01:CDS |
| AAAATAATCATGCACATATA+AGG | 0.217620 | 6:-101352717 | None:intergenic |
| AGACGATTGGTGACGTTAAA+TGG | 0.220148 | 6:+101352758 | MsG0680035274.01.T01:CDS |
| AAAACTGCCTCTTAAATCTT+TGG | 0.224400 | 6:+101351995 | MsG0680035274.01.T01:CDS |
| TGATACCGAAAATTACAATT+TGG | 0.246596 | 6:+101352315 | MsG0680035274.01.T01:CDS |
| ATCGAAATCAACAACTAAAA+AGG | 0.310332 | 6:+101351929 | MsG0680035274.01.T01:CDS |
| GTGTTTACACTTCATGGATT+TGG | 0.314769 | 6:+101352413 | MsG0680035274.01.T01:CDS |
| ATCGAAAATTATTGCATTCA+AGG | 0.337291 | 6:+101352995 | MsG0680035274.01.T01:CDS |
| GATTGTGTTTACTGTCCTAT+TGG | 0.349348 | 6:+101352896 | MsG0680035274.01.T01:CDS |
| TGATCATTCTCTTGAATTGA+AGG | 0.357833 | 6:-101352233 | None:intergenic |
| CCTACCGGCTATTATCATTC+AGG | 0.374615 | 6:+101352590 | MsG0680035274.01.T01:CDS |
| AGGGCTGTGTTTACACTTCA+TGG | 0.376120 | 6:+101352407 | MsG0680035274.01.T01:CDS |
| CGGGGAGAAATTCGAGAATA+AGG | 0.376821 | 6:+101352193 | MsG0680035274.01.T01:CDS |
| GGCAGGGACTCGAGAGGACT+AGG | 0.397302 | 6:-101352371 | None:intergenic |
| CCCTGCCACCTTCTTATGAC+AGG | 0.400818 | 6:+101352387 | MsG0680035274.01.T01:CDS |
| TATTACGATAATTCTTCATA+AGG | 0.401923 | 6:+101353027 | MsG0680035274.01.T01:CDS |
| AGAATAAGGTCAAATTAGAT+TGG | 0.411158 | 6:+101352207 | MsG0680035274.01.T01:CDS |
| TGGACTAAACTCTTCGTTGT+TGG | 0.423216 | 6:+101352866 | MsG0680035274.01.T01:CDS |
| AATCGAACCAAAGATTTAAG+AGG | 0.431339 | 6:-101352002 | None:intergenic |
| TAACCTTCGAAATCGGTTAG+AGG | 0.437342 | 6:-101352491 | None:intergenic |
| CCCTGTCATAAGAAGGTGGC+AGG | 0.444977 | 6:-101352388 | None:intergenic |
| AAATAATCATGCACATATAA+GGG | 0.450592 | 6:-101352716 | None:intergenic |
| GTGTTTACTGTCCTATTGGA+GGG | 0.451074 | 6:+101352900 | MsG0680035274.01.T01:CDS |
| CTGCATGTCGAATCACCTTA+AGG | 0.456142 | 6:-101352457 | None:intergenic |
| GATGATTCATGTCTCACCTT+AGG | 0.458625 | 6:+101352125 | MsG0680035274.01.T01:CDS |
| TGTGTTTACTGTCCTATTGG+AGG | 0.460179 | 6:+101352899 | MsG0680035274.01.T01:CDS |
| ATGGAGAATGTAAAATCATC+AGG | 0.464376 | 6:-101351966 | None:intergenic |
| ATATTCTTTGTGTCAAATGA+TGG | 0.471101 | 6:+101352938 | MsG0680035274.01.T01:CDS |
| GGACAGTAAACACAATCTAA+TGG | 0.472380 | 6:-101352890 | None:intergenic |
| GTTTACTGTCCTATTGGAGG+GGG | 0.473245 | 6:+101352902 | MsG0680035274.01.T01:CDS |
| TAACAACAATTACTCTTATG+TGG | 0.476387 | 6:+101352103 | MsG0680035274.01.T01:CDS |
| CCTTAAGGTCATTTCTAACA+TGG | 0.479365 | 6:-101352442 | None:intergenic |
| ATATTGGATTCTGTTGTTGA+TGG | 0.482197 | 6:+101352266 | MsG0680035274.01.T01:CDS |
| AGGAAGGACCTTGAATTCCT+TGG | 0.488140 | 6:-101352348 | None:intergenic |
| CCATGTTAGAAATGACCTTA+AGG | 0.495333 | 6:+101352442 | MsG0680035274.01.T01:CDS |
| CGTAACTACCAAGGAATTCA+AGG | 0.496567 | 6:+101352340 | MsG0680035274.01.T01:CDS |
| CAAATGATGGAGAACTAGTT+CGG | 0.497057 | 6:+101352951 | MsG0680035274.01.T01:CDS |
| GGTAACGGAATACACACAAA+TGG | 0.498647 | 6:+101352611 | MsG0680035274.01.T01:CDS |
| TGTTTACTGTCCTATTGGAG+GGG | 0.508097 | 6:+101352901 | MsG0680035274.01.T01:CDS |
| TGGGATATAACCTTCGAAAT+CGG | 0.510796 | 6:-101352498 | None:intergenic |
| TTACTCCTCCGACTGGAAGA+AGG | 0.511589 | 6:-101353054 | None:intergenic |
| CTTATTCTCGAATTTCTCCC+CGG | 0.511699 | 6:-101352192 | None:intergenic |
| ATCATGCACATATAAGGGTA+GGG | 0.513205 | 6:-101352711 | None:intergenic |
| ATCTGTCTCATGTATTCCTA+AGG | 0.515803 | 6:-101352141 | None:intergenic |
| AACTCGGTGTGAAAGAATCA+TGG | 0.523056 | 6:+101352846 | MsG0680035274.01.T01:CDS |
| ACACAAATGGAGTGTGTCAT+TGG | 0.525343 | 6:+101352624 | MsG0680035274.01.T01:CDS |
| TCCCACATGGAGTCGTGTGG+TGG | 0.537617 | 6:-101352518 | None:intergenic |
| GGATGGATTTGATGATTGCA+TGG | 0.537721 | 6:+101352649 | MsG0680035274.01.T01:CDS |
| AATCATGCACATATAAGGGT+AGG | 0.539598 | 6:-101352712 | None:intergenic |
| TGTATTGGTGGATAGACGAT+TGG | 0.547265 | 6:+101352745 | MsG0680035274.01.T01:CDS |
| GGCTATTATCATTCAGGTAA+CGG | 0.552864 | 6:+101352596 | MsG0680035274.01.T01:CDS |
| TTAGATGCGTACGTAAATCA+TGG | 0.555957 | 6:+101352024 | MsG0680035274.01.T01:CDS |
| GGCACTATTTGTTTCTACCA+AGG | 0.558987 | 6:+101352287 | MsG0680035274.01.T01:CDS |
| GGAGTGTGTCATTGGTGGGA+TGG | 0.567100 | 6:+101352632 | MsG0680035274.01.T01:CDS |
| CCTGCCACCTTCTTATGACA+GGG | 0.568010 | 6:+101352388 | MsG0680035274.01.T01:CDS |
| ACAGCTTAAGAAGTAACTCA+TGG | 0.568819 | 6:+101352546 | MsG0680035274.01.T01:CDS |
| TGTTCTAAAGAATATATCGC+TGG | 0.581379 | 6:-101352687 | None:intergenic |
| AACACAGCCCTGTCATAAGA+AGG | 0.586210 | 6:-101352395 | None:intergenic |
| GTTACCTGAATGATAATAGC+CGG | 0.594645 | 6:-101352594 | None:intergenic |
| TTTACTGTCCTATTGGAGGG+GGG | 0.594771 | 6:+101352903 | MsG0680035274.01.T01:CDS |
| TCATGCACATATAAGGGTAG+GGG | 0.603057 | 6:-101352710 | None:intergenic |
| ACTCGAGAGGACTAGGAGGA+AGG | 0.607490 | 6:-101352364 | None:intergenic |
| ATAGCTTGAGATAAAAGCAA+CGG | 0.614182 | 6:-101352783 | None:intergenic |
| CAGCTTAAGAAGTAACTCAT+GGG | 0.615448 | 6:+101352547 | MsG0680035274.01.T01:CDS |
| ATGCCTCTAACCGATTTCGA+AGG | 0.622609 | 6:+101352488 | MsG0680035274.01.T01:CDS |
| TCATTCTCTTGAATTGAAGG+TGG | 0.622630 | 6:-101352230 | None:intergenic |
| CAAATGGAGTGTGTCATTGG+TGG | 0.626602 | 6:+101352627 | MsG0680035274.01.T01:CDS |
| CTTGATGTAGATATACCTAC+CGG | 0.629736 | 6:+101352575 | MsG0680035274.01.T01:CDS |
| TCCCACCACACGACTCCATG+TGG | 0.634010 | 6:+101352516 | MsG0680035274.01.T01:CDS |
| AGGGACTCGAGAGGACTAGG+AGG | 0.636669 | 6:-101352368 | None:intergenic |
| AAGGATGTCCTTCTTCCAGT+CGG | 0.637897 | 6:+101353046 | MsG0680035274.01.T01:CDS |
| CCCACATGGAGTCGTGTGGT+GGG | 0.640922 | 6:-101352517 | None:intergenic |
| CCTGAATGATAATAGCCGGT+AGG | 0.646839 | 6:-101352590 | None:intergenic |
| ACCTCCCACATGGAGTCGTG+TGG | 0.648404 | 6:-101352521 | None:intergenic |
| AAATGGAGTGTGTCATTGGT+GGG | 0.648608 | 6:+101352628 | MsG0680035274.01.T01:CDS |
| CCTGTCATAAGAAGGTGGCA+GGG | 0.665371 | 6:-101352387 | None:intergenic |
| AATTTGGAACGTAACTACCA+AGG | 0.667394 | 6:+101352331 | MsG0680035274.01.T01:CDS |
| GAAGGTGGCAGGGACTCGAG+AGG | 0.680574 | 6:-101352377 | None:intergenic |
| ACAGCCCTGTCATAAGAAGG+TGG | 0.685647 | 6:-101352392 | None:intergenic |
| ACCACACGACTCCATGTGGG+AGG | 0.685669 | 6:+101352520 | MsG0680035274.01.T01:CDS |
| CCCACCACACGACTCCATGT+GGG | 0.688740 | 6:+101352517 | MsG0680035274.01.T01:CDS |
| GATGTCCTTCTTCCAGTCGG+AGG | 0.698661 | 6:+101353049 | MsG0680035274.01.T01:CDS |
| TAAGCTGTATACCTCCCACA+TGG | 0.711141 | 6:-101352531 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATCAAAGTTTATATATAT+TGG | + | Chr6:101352250-101352269 | MsG0680035274.01.T01:CDS | 15.0% |
| !! | AAAATAATCATGCACATATA+AGG | - | Chr6:101352720-101352739 | None:intergenic | 20.0% |
| !! | AAATAATCATGCACATATAA+GGG | - | Chr6:101352719-101352738 | None:intergenic | 20.0% |
| !! | TATTACGATAATTCTTCATA+AGG | + | Chr6:101353027-101353046 | MsG0680035274.01.T01:CDS | 20.0% |
| !!! | TGATTATTTTGGTTTTGTAT+TGG | + | Chr6:101352730-101352749 | MsG0680035274.01.T01:CDS | 20.0% |
| !!! | TTATATGTGCATGATTATTT+TGG | + | Chr6:101352719-101352738 | MsG0680035274.01.T01:CDS | 20.0% |
| ! | AGAATAAGGTCAAATTAGAT+TGG | + | Chr6:101352207-101352226 | MsG0680035274.01.T01:CDS | 25.0% |
| ! | ATATTCTTTGTGTCAAATGA+TGG | + | Chr6:101352938-101352957 | MsG0680035274.01.T01:CDS | 25.0% |
| ! | ATCGAAAATTATTGCATTCA+AGG | + | Chr6:101352995-101353014 | MsG0680035274.01.T01:CDS | 25.0% |
| ! | ATCGAAATCAACAACTAAAA+AGG | + | Chr6:101351929-101351948 | MsG0680035274.01.T01:CDS | 25.0% |
| ! | TAACAACAATTACTCTTATG+TGG | + | Chr6:101352103-101352122 | MsG0680035274.01.T01:CDS | 25.0% |
| ! | TGATACCGAAAATTACAATT+TGG | + | Chr6:101352315-101352334 | MsG0680035274.01.T01:CDS | 25.0% |
| !! | ACGTTCCAAATTGTAATTTT+CGG | - | Chr6:101352323-101352342 | None:intergenic | 25.0% |
| !! | AGTGTTCACATATCAATTTT+AGG | + | Chr6:101352821-101352840 | MsG0680035274.01.T01:CDS | 25.0% |
| !! | GCAATAATTTTCGATCATTT+CGG | - | Chr6:101352990-101353009 | None:intergenic | 25.0% |
| !!! | ATATCAATTTTAGGTGAACT+CGG | + | Chr6:101352830-101352849 | MsG0680035274.01.T01:CDS | 25.0% |
| !!! | TTATTTTGGTTTTGTATTGG+TGG | + | Chr6:101352733-101352752 | MsG0680035274.01.T01:CDS | 25.0% |
| AAAACTGCCTCTTAAATCTT+TGG | + | Chr6:101351995-101352014 | MsG0680035274.01.T01:CDS | 30.0% | |
| AATCGAACCAAAGATTTAAG+AGG | - | Chr6:101352005-101352024 | None:intergenic | 30.0% | |
| ATAGCTTGAGATAAAAGCAA+CGG | - | Chr6:101352786-101352805 | None:intergenic | 30.0% | |
| ATATTGGATTCTGTTGTTGA+TGG | + | Chr6:101352266-101352285 | MsG0680035274.01.T01:CDS | 30.0% | |
| ATGGAGAATGTAAAATCATC+AGG | - | Chr6:101351969-101351988 | None:intergenic | 30.0% | |
| TATTGCATTCAAGGTGTATT+TGG | + | Chr6:101353004-101353023 | MsG0680035274.01.T01:CDS | 30.0% | |
| TGATCATTCTCTTGAATTGA+AGG | - | Chr6:101352236-101352255 | None:intergenic | 30.0% | |
| !! | TGTTCTAAAGAATATATCGC+TGG | - | Chr6:101352690-101352709 | None:intergenic | 30.0% |
| AATCATGCACATATAAGGGT+AGG | - | Chr6:101352715-101352734 | None:intergenic | 35.0% | |
| ACAGCTTAAGAAGTAACTCA+TGG | + | Chr6:101352546-101352565 | MsG0680035274.01.T01:CDS | 35.0% | |
| ATCATGCACATATAAGGGTA+GGG | - | Chr6:101352714-101352733 | None:intergenic | 35.0% | |
| ATCTGTCTCATGTATTCCTA+AGG | - | Chr6:101352144-101352163 | None:intergenic | 35.0% | |
| CAGCTTAAGAAGTAACTCAT+GGG | + | Chr6:101352547-101352566 | MsG0680035274.01.T01:CDS | 35.0% | |
| CCATGTTAGAAATGACCTTA+AGG | + | Chr6:101352442-101352461 | MsG0680035274.01.T01:CDS | 35.0% | |
| CCTTAAGGTCATTTCTAACA+TGG | - | Chr6:101352445-101352464 | None:intergenic | 35.0% | |
| CTTGATGTAGATATACCTAC+CGG | + | Chr6:101352575-101352594 | MsG0680035274.01.T01:CDS | 35.0% | |
| GATTGTGTTTACTGTCCTAT+TGG | + | Chr6:101352896-101352915 | MsG0680035274.01.T01:CDS | 35.0% | |
| GGACAGTAAACACAATCTAA+TGG | - | Chr6:101352893-101352912 | None:intergenic | 35.0% | |
| GGCTATTATCATTCAGGTAA+CGG | + | Chr6:101352596-101352615 | MsG0680035274.01.T01:CDS | 35.0% | |
| GTGTTTACACTTCATGGATT+TGG | + | Chr6:101352413-101352432 | MsG0680035274.01.T01:CDS | 35.0% | |
| GTTACCTGAATGATAATAGC+CGG | - | Chr6:101352597-101352616 | None:intergenic | 35.0% | |
| TCATTCTCTTGAATTGAAGG+TGG | - | Chr6:101352233-101352252 | None:intergenic | 35.0% | |
| TGGGATATAACCTTCGAAAT+CGG | - | Chr6:101352501-101352520 | None:intergenic | 35.0% | |
| TTAGATGCGTACGTAAATCA+TGG | + | Chr6:101352024-101352043 | MsG0680035274.01.T01:CDS | 35.0% | |
| ! | AATTTGGAACGTAACTACCA+AGG | + | Chr6:101352331-101352350 | MsG0680035274.01.T01:CDS | 35.0% |
| ! | CAAATGATGGAGAACTAGTT+CGG | + | Chr6:101352951-101352970 | MsG0680035274.01.T01:CDS | 35.0% |
| ! | TTTTCGGTATCATCAAACCT+TGG | - | Chr6:101352307-101352326 | None:intergenic | 35.0% |
| ACACAAATGGAGTGTGTCAT+TGG | + | Chr6:101352624-101352643 | MsG0680035274.01.T01:CDS | 40.0% | |
| CGTAACTACCAAGGAATTCA+AGG | + | Chr6:101352340-101352359 | MsG0680035274.01.T01:CDS | 40.0% | |
| CTTATTCTCGAATTTCTCCC+CGG | - | Chr6:101352195-101352214 | None:intergenic | 40.0% | |
| GATGATTCATGTCTCACCTT+AGG | + | Chr6:101352125-101352144 | MsG0680035274.01.T01:CDS | 40.0% | |
| GTGTTTACTGTCCTATTGGA+GGG | + | Chr6:101352900-101352919 | MsG0680035274.01.T01:CDS | 40.0% | |
| TAACCTTCGAAATCGGTTAG+AGG | - | Chr6:101352494-101352513 | None:intergenic | 40.0% | |
| TCATGCACATATAAGGGTAG+GGG | - | Chr6:101352713-101352732 | None:intergenic | 40.0% | |
| TGGACTAAACTCTTCGTTGT+TGG | + | Chr6:101352866-101352885 | MsG0680035274.01.T01:CDS | 40.0% | |
| TGTGTTTACTGTCCTATTGG+AGG | + | Chr6:101352899-101352918 | MsG0680035274.01.T01:CDS | 40.0% | |
| TGTTTACTGTCCTATTGGAG+GGG | + | Chr6:101352901-101352920 | MsG0680035274.01.T01:CDS | 40.0% | |
| ! | AAATGGAGTGTGTCATTGGT+GGG | + | Chr6:101352628-101352647 | MsG0680035274.01.T01:CDS | 40.0% |
| ! | GGATGGATTTGATGATTGCA+TGG | + | Chr6:101352649-101352668 | MsG0680035274.01.T01:CDS | 40.0% |
| ! | TGTATTGGTGGATAGACGAT+TGG | + | Chr6:101352745-101352764 | MsG0680035274.01.T01:CDS | 40.0% |
| ! | TGTGCACTGTTTTCTCTTTC+CGG | + | Chr6:101352173-101352192 | MsG0680035274.01.T01:CDS | 40.0% |
| !! | AACTCGGTGTGAAAGAATCA+TGG | + | Chr6:101352846-101352865 | MsG0680035274.01.T01:CDS | 40.0% |
| !! | AAGAGGCAGTTTTGATCGAA+TGG | - | Chr6:101351988-101352007 | None:intergenic | 40.0% |
| !! | AGACGATTGGTGACGTTAAA+TGG | + | Chr6:101352758-101352777 | MsG0680035274.01.T01:CDS | 40.0% |
| !! | GGCACTATTTGTTTCTACCA+AGG | + | Chr6:101352287-101352306 | MsG0680035274.01.T01:CDS | 40.0% |
| !! | GGTAACGGAATACACACAAA+TGG | + | Chr6:101352611-101352630 | MsG0680035274.01.T01:CDS | 40.0% |
| AACACAGCCCTGTCATAAGA+AGG | - | Chr6:101352398-101352417 | None:intergenic | 45.0% | |
| AAGGATGTCCTTCTTCCAGT+CGG | + | Chr6:101353046-101353065 | MsG0680035274.01.T01:CDS | 45.0% | |
| AGGAAGGACCTTGAATTCCT+TGG | - | Chr6:101352351-101352370 | None:intergenic | 45.0% | |
| AGGGCTGTGTTTACACTTCA+TGG | + | Chr6:101352407-101352426 | MsG0680035274.01.T01:CDS | 45.0% | |
| CCTGAATGATAATAGCCGGT+AGG | - | Chr6:101352593-101352612 | None:intergenic | 45.0% | |
| CGGGGAGAAATTCGAGAATA+AGG | + | Chr6:101352193-101352212 | MsG0680035274.01.T01:CDS | 45.0% | |
| CTGCATGTCGAATCACCTTA+AGG | - | Chr6:101352460-101352479 | None:intergenic | 45.0% | |
| GTTTACTGTCCTATTGGAGG+GGG | + | Chr6:101352902-101352921 | MsG0680035274.01.T01:CDS | 45.0% | |
| TAAGCTGTATACCTCCCACA+TGG | - | Chr6:101352534-101352553 | None:intergenic | 45.0% | |
| TTTACTGTCCTATTGGAGGG+GGG | + | Chr6:101352903-101352922 | MsG0680035274.01.T01:CDS | 45.0% | |
| ! | ACATGTTTTACTCCTCCGAC+TGG | - | Chr6:101353064-101353083 | None:intergenic | 45.0% |
| ! | ATGCCTCTAACCGATTTCGA+AGG | + | Chr6:101352488-101352507 | MsG0680035274.01.T01:CDS | 45.0% |
| ! | CAAATGGAGTGTGTCATTGG+TGG | + | Chr6:101352627-101352646 | MsG0680035274.01.T01:CDS | 45.0% |
| ! | CCTACCGGCTATTATCATTC+AGG | + | Chr6:101352590-101352609 | MsG0680035274.01.T01:CDS | 45.0% |
| ! | GTGCACTGTTTTCTCTTTCC+GGG | + | Chr6:101352174-101352193 | MsG0680035274.01.T01:CDS | 45.0% |
| ! | TGCACTGTTTTCTCTTTCCG+GGG | + | Chr6:101352175-101352194 | MsG0680035274.01.T01:CDS | 45.0% |
| ACAGCCCTGTCATAAGAAGG+TGG | - | Chr6:101352395-101352414 | None:intergenic | 50.0% | |
| CCTATTGGAGGGGGGAATAA+AGG | + | Chr6:101352911-101352930 | MsG0680035274.01.T01:CDS | 50.0% | |
| CCTGCCACCTTCTTATGACA+GGG | + | Chr6:101352388-101352407 | MsG0680035274.01.T01:CDS | 50.0% | |
| CCTGTCATAAGAAGGTGGCA+GGG | - | Chr6:101352390-101352409 | None:intergenic | 50.0% | |
| CCTTTATTCCCCCCTCCAAT+AGG | - | Chr6:101352914-101352933 | None:intergenic | 50.0% | |
| TTACTCCTCCGACTGGAAGA+AGG | - | Chr6:101353057-101353076 | None:intergenic | 50.0% | |
| ACTCGAGAGGACTAGGAGGA+AGG | - | Chr6:101352367-101352386 | None:intergenic | 55.0% | |
| CCCTGCCACCTTCTTATGAC+AGG | + | Chr6:101352387-101352406 | MsG0680035274.01.T01:CDS | 55.0% | |
| CCCTGTCATAAGAAGGTGGC+AGG | - | Chr6:101352391-101352410 | None:intergenic | 55.0% | |
| GATGTCCTTCTTCCAGTCGG+AGG | + | Chr6:101353049-101353068 | MsG0680035274.01.T01:CDS | 55.0% | |
| ! | GGAGTGTGTCATTGGTGGGA+TGG | + | Chr6:101352632-101352651 | MsG0680035274.01.T01:CDS | 55.0% |
| ACCACACGACTCCATGTGGG+AGG | + | Chr6:101352520-101352539 | MsG0680035274.01.T01:CDS | 60.0% | |
| ACCTCCCACATGGAGTCGTG+TGG | - | Chr6:101352524-101352543 | None:intergenic | 60.0% | |
| AGGGACTCGAGAGGACTAGG+AGG | - | Chr6:101352371-101352390 | None:intergenic | 60.0% | |
| CCCACATGGAGTCGTGTGGT+GGG | - | Chr6:101352520-101352539 | None:intergenic | 60.0% | |
| CCCACCACACGACTCCATGT+GGG | + | Chr6:101352517-101352536 | MsG0680035274.01.T01:CDS | 60.0% | |
| TCCCACATGGAGTCGTGTGG+TGG | - | Chr6:101352521-101352540 | None:intergenic | 60.0% | |
| TCCCACCACACGACTCCATG+TGG | + | Chr6:101352516-101352535 | MsG0680035274.01.T01:CDS | 60.0% | |
| GAAGGTGGCAGGGACTCGAG+AGG | - | Chr6:101352380-101352399 | None:intergenic | 65.0% | |
| GGCAGGGACTCGAGAGGACT+AGG | - | Chr6:101352374-101352393 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 101351921 | 101353093 | 101351921 | ID=MsG0680035274.01;Name=MsG0680035274.01 |
| Chr6 | mRNA | 101351921 | 101353093 | 101351921 | ID=MsG0680035274.01.T01;Parent=MsG0680035274.01;Name=MsG0680035274.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|390 |
| Chr6 | exon | 101351921 | 101353093 | 101351921 | ID=MsG0680035274.01.T01:exon:10643;Parent=MsG0680035274.01.T01 |
| Chr6 | CDS | 101351921 | 101353093 | 101351921 | ID=MsG0680035274.01.T01:cds;Parent=MsG0680035274.01.T01 |
| Gene Sequence |
| Protein sequence |
