AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035295.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035295.01.T01 MTR_0129s0050 73.608 413 92 6 7 409 4 409 0.0 564
MsG0680035295.01.T01 MTR_0129s0070 62.927 410 136 8 1 408 1 396 8.53e-167 473
MsG0680035295.01.T01 MTR_0129s0120 60.880 409 144 8 1 407 1 395 1.12e-156 447
MsG0680035295.01.T01 MTR_4g117550 55.847 419 128 12 1 408 1 373 5.24e-145 417
MsG0680035295.01.T01 MTR_8g063440 50.000 402 177 9 9 408 4 383 1.32e-119 353
MsG0680035295.01.T01 MTR_5g097330 46.793 421 192 10 2 408 1 403 5.58e-112 334
MsG0680035295.01.T01 MTR_2g021800 46.604 427 197 12 2 408 1 416 3.00e-111 333
MsG0680035295.01.T01 MTR_2g022000 47.242 417 192 14 2 400 1 407 1.71e-109 329
MsG0680035295.01.T01 MTR_6g086825 47.304 408 188 9 14 408 67 460 4.95e-109 328
MsG0680035295.01.T01 MTR_2g038680 47.877 424 189 15 2 407 1 410 6.91e-109 327
MsG0680035295.01.T01 MTR_6g079810 47.156 422 194 13 1 406 53 461 7.94e-108 325
MsG0680035295.01.T01 MTR_6g079770 49.392 411 185 9 12 406 12 415 2.76e-107 323
MsG0680035295.01.T01 MTR_8g464770 47.487 398 178 10 7 400 2 372 4.55e-107 320
MsG0680035295.01.T01 MTR_1g007450 47.739 398 181 9 7 394 2 382 4.49e-106 320
MsG0680035295.01.T01 MTR_0054s0090 46.226 424 196 11 1 409 1 407 6.84e-106 318
MsG0680035295.01.T01 MTR_4g014370 43.953 430 188 10 10 409 4 410 5.22e-103 311
MsG0680035295.01.T01 MTR_0054s0100 45.412 425 198 12 1 408 1 408 6.23e-102 308
MsG0680035295.01.T01 MTR_4g102410 45.610 410 201 13 7 406 51 448 4.10e-101 308
MsG0680035295.01.T01 MTR_0134s0060 46.318 421 191 10 9 407 4 411 4.90e-101 306
MsG0680035295.01.T01 MTR_7g069550 44.498 418 190 16 7 408 4 395 9.04e-100 303
MsG0680035295.01.T01 MTR_5g097220 45.519 424 195 12 5 408 1 408 1.68e-99 302
MsG0680035295.01.T01 MTR_2g021770 44.365 417 209 13 5 408 1 407 1.18e-98 300
MsG0680035295.01.T01 MTR_5g097680 43.341 443 200 15 1 408 1 427 6.81e-98 299
MsG0680035295.01.T01 MTR_2g066170 44.988 409 188 12 9 407 4 385 1.80e-97 296
MsG0680035295.01.T01 MTR_6g090180 45.192 416 204 13 1 404 31 434 5.26e-97 297
MsG0680035295.01.T01 MTR_5g096630 44.444 414 203 9 11 408 12 414 5.76e-97 296
MsG0680035295.01.T01 MTR_8g012090 47.120 382 134 9 9 377 8 334 9.16e-97 293
MsG0680035295.01.T01 MTR_2g104340 45.433 416 190 15 7 408 4 396 1.31e-96 295
MsG0680035295.01.T01 MTR_2g021950 43.478 414 202 12 2 404 1 393 6.98e-96 293
MsG0680035295.01.T01 MTR_6g478230 43.128 422 191 8 7 409 17 408 2.15e-95 292
MsG0680035295.01.T01 MTR_2g066200 43.826 413 193 14 7 407 2 387 2.28e-95 291
MsG0680035295.01.T01 MTR_0831s0010 43.358 399 196 11 14 407 47 420 2.57e-95 292
MsG0680035295.01.T01 MTR_6g461660 44.686 414 193 13 8 408 10 400 3.52e-95 291
MsG0680035295.01.T01 MTR_3g011120 44.836 397 182 12 7 397 4 369 7.31e-95 289
MsG0680035295.01.T01 MTR_6g080680 44.928 414 177 13 4 399 6 386 9.39e-95 290
MsG0680035295.01.T01 MTR_4g028680 44.076 422 199 12 2 408 1 400 7.42e-94 288
MsG0680035295.01.T01 MTR_8g467670 43.204 412 195 11 5 409 1 380 2.46e-93 286
MsG0680035295.01.T01 MTR_4g055820 46.866 367 173 10 6 362 3 357 2.60e-93 285
MsG0680035295.01.T01 MTR_2g104280 44.310 413 206 14 8 408 5 405 3.48e-93 286
MsG0680035295.01.T01 MTR_8g041270 45.131 421 199 16 4 408 2 406 8.06e-93 285
MsG0680035295.01.T01 MTR_8g064890 42.892 408 197 11 11 409 9 389 1.07e-92 284
MsG0680035295.01.T01 MTR_8g046310 43.796 411 181 15 5 403 1 373 1.33e-92 283
MsG0680035295.01.T01 MTR_1g007410 45.060 415 197 13 2 404 7 402 2.42e-92 284
MsG0680035295.01.T01 MTR_7g017130 46.699 409 184 13 11 408 12 397 3.07e-92 283
MsG0680035295.01.T01 MTR_4g028510 42.317 423 207 11 2 408 1 402 3.44e-91 283
MsG0680035295.01.T01 MTR_5g097350 44.988 409 173 12 12 404 11 383 1.45e-90 279
MsG0680035295.01.T01 MTR_4g028660 41.966 417 206 11 2 404 1 395 4.14e-90 278
MsG0680035295.01.T01 MTR_4g027450 41.966 417 206 11 2 404 1 395 4.14e-90 278
MsG0680035295.01.T01 MTR_7g017040 45.169 414 184 14 12 408 11 398 5.28e-90 278
MsG0680035295.01.T01 MTR_5g059430 41.647 425 209 11 6 406 15 424 2.44e-89 277
MsG0680035295.01.T01 MTR_7g017170 45.368 421 184 14 11 408 12 409 2.70e-89 276
MsG0680035295.01.T01 MTR_8g039500 44.297 377 168 11 9 377 4 346 3.56e-89 274
MsG0680035295.01.T01 MTR_5g037680 43.552 411 175 16 12 400 3 378 3.75e-89 277
MsG0680035295.01.T01 MTR_2g034700 42.892 408 181 12 5 400 1 368 3.97e-89 275
MsG0680035295.01.T01 MTR_2g066150 42.298 409 175 12 9 408 4 360 5.43e-89 274
MsG0680035295.01.T01 MTR_4g130330 44.282 411 190 13 14 408 4 391 1.41e-88 274
MsG0680035295.01.T01 MTR_5g069390 41.667 420 203 12 10 408 19 417 3.67e-88 276
MsG0680035295.01.T01 MTR_7g111700 42.353 425 168 14 1 408 1 365 5.99e-88 271
MsG0680035295.01.T01 MTR_2g065840 42.959 419 189 14 7 407 2 388 2.10e-87 271
MsG0680035295.01.T01 MTR_8g046200 40.798 451 183 17 5 404 1 418 6.64e-86 268
MsG0680035295.01.T01 MTR_2g065860 42.029 414 193 14 11 408 6 388 1.18e-85 266
MsG0680035295.01.T01 MTR_5g072060 44.784 393 161 16 15 391 4 356 9.81e-85 271
MsG0680035295.01.T01 MTR_5g096910 39.486 428 202 11 1 407 1 392 3.65e-84 263
MsG0680035295.01.T01 MTR_7g079640 42.159 389 178 12 7 386 4 354 1.55e-83 260
MsG0680035295.01.T01 MTR_8g046220 41.324 438 183 18 5 404 1 402 3.71e-83 260
MsG0680035295.01.T01 MTR_8g033140 39.394 429 204 13 13 409 15 419 4.22e-83 261
MsG0680035295.01.T01 MTR_5g091140 41.895 401 187 14 1 388 30 397 9.32e-82 257
MsG0680035295.01.T01 MTR_8g013000 43.251 363 190 9 8 365 1 352 2.44e-81 256
MsG0680035295.01.T01 MTR_2g064950 41.753 388 198 11 8 386 1 369 8.02e-81 254
MsG0680035295.01.T01 MTR_4g007940 41.761 352 175 10 66 405 6 339 1.66e-80 251
MsG0680035295.01.T01 MTR_1g007430 46.939 343 151 9 28 365 7 323 2.11e-80 251
MsG0680035295.01.T01 MTR_4g028750 40.852 399 199 11 2 386 1 376 9.93e-80 251
MsG0680035295.01.T01 MTR_8g063330 42.308 364 182 10 9 363 4 348 2.01e-79 253
MsG0680035295.01.T01 MTR_5g092850 40.714 420 203 15 6 404 4 398 9.58e-78 246
MsG0680035295.01.T01 MTR_8g032980 38.914 442 210 14 6 409 3 422 1.66e-77 246
MsG0680035295.01.T01 MTR_1g053510 40.855 421 207 15 5 403 1 401 2.75e-77 245
MsG0680035295.01.T01 MTR_5g024260 40.670 418 189 16 14 401 19 407 3.61e-77 245
MsG0680035295.01.T01 MTR_8g064790 39.500 400 161 12 15 408 13 337 6.02e-76 239
MsG0680035295.01.T01 MTR_5g022850 38.005 421 180 14 1 408 1 353 7.23e-75 237
MsG0680035295.01.T01 MTR_8g033090 38.863 422 211 14 14 408 11 412 9.58e-73 234
MsG0680035295.01.T01 MTR_5g074850 39.851 404 201 14 2 385 20 401 2.81e-72 244
MsG0680035295.01.T01 MTR_8g033110 38.161 435 218 15 5 408 1 415 5.45e-72 232
MsG0680035295.01.T01 MTR_5g074800 41.918 365 175 17 56 408 1 340 1.75e-71 228
MsG0680035295.01.T01 MTR_5g064700 39.378 386 183 13 56 408 1 368 2.13e-70 226
MsG0680035295.01.T01 MTR_1g098180 38.164 414 188 13 4 405 6 363 2.81e-70 226
MsG0680035295.01.T01 MTR_5g043605 37.740 416 162 14 3 408 11 339 7.25e-69 222
MsG0680035295.01.T01 MTR_8g036970 39.119 386 142 13 25 395 6 313 7.82e-69 222
MsG0680035295.01.T01 MTR_6g079790 42.991 321 157 9 101 408 2 309 1.18e-68 220
MsG0680035295.01.T01 MTR_6g090250 39.356 404 197 12 35 403 29 419 1.22e-67 221
MsG0680035295.01.T01 MTR_5g075370 39.409 406 199 15 14 394 5 388 1.88e-67 228
MsG0680035295.01.T01 MTR_7g016930 43.402 341 147 10 10 344 9 309 3.13e-67 217
MsG0680035295.01.T01 MTR_1g050308 37.621 412 168 12 3 409 21 348 5.60e-66 214
MsG0680035295.01.T01 MTR_8g018110 36.105 421 209 11 14 408 11 397 8.67e-66 215
MsG0680035295.01.T01 MTR_6g078010 37.808 365 177 9 54 403 1 330 2.50e-65 212
MsG0680035295.01.T01 MTR_5g076490 40.437 366 177 13 54 408 1 336 5.76e-63 206
MsG0680035295.01.T01 MTR_6g004450 47.737 243 103 7 168 407 47 268 2.44e-62 202
MsG0680035295.01.T01 MTR_8g063370 35.236 403 218 16 6 400 17 384 5.64e-61 202
MsG0680035295.01.T01 MTR_5g096900 43.402 341 138 14 12 331 7 313 2.09e-60 199
MsG0680035295.01.T01 MTR_1g050312 40.498 321 133 13 89 400 16 287 3.89e-60 197
MsG0680035295.01.T01 MTR_2g021920 47.059 238 118 6 170 404 37 269 6.55e-60 196
MsG0680035295.01.T01 MTR_5g092860 38.525 366 175 14 35 385 20 350 1.19e-59 198
MsG0680035295.01.T01 MTR_8g063310 35.663 415 216 17 4 400 8 389 1.54e-59 199
MsG0680035295.01.T01 MTR_7g104710 41.298 339 129 11 2 323 1 286 8.23e-58 192
MsG0680035295.01.T01 MTR_6g087620 38.769 325 138 12 89 398 1 279 3.38e-57 189
MsG0680035295.01.T01 MTR_5g068490 40.575 313 143 12 98 409 8 278 1.05e-56 188
MsG0680035295.01.T01 MTR_5g023970 52.332 193 85 5 217 408 10 196 8.45e-55 180
MsG0680035295.01.T01 MTR_7g023800 39.118 363 141 13 56 399 1 302 9.41e-55 184
MsG0680035295.01.T01 MTR_8g063350 33.418 395 178 15 17 398 14 336 1.64e-52 179
MsG0680035295.01.T01 MTR_5g086590 42.562 242 112 6 136 377 14 228 3.54e-52 175
MsG0680035295.01.T01 MTR_6g090260 47.895 190 90 5 218 403 75 259 1.40e-50 171
MsG0680035295.01.T01 MTR_6g090260 51.562 64 30 1 4 66 6 69 5.65e-11 63.2
MsG0680035295.01.T01 MTR_4g014370 46.000 200 95 3 213 409 149 338 8.62e-50 171
MsG0680035295.01.T01 MTR_4g014370 51.515 132 60 3 2 129 6 137 5.36e-30 119
MsG0680035295.01.T01 MTR_5g094350 40.068 292 127 12 13 285 9 271 1.26e-49 169
MsG0680035295.01.T01 MTR_8g073570 53.714 175 75 5 8 181 1 170 2.52e-49 165
MsG0680035295.01.T01 MTR_5g097820 41.754 285 132 12 1 273 7 269 4.55e-49 167
MsG0680035295.01.T01 MTR_8g033000 33.943 383 205 13 54 408 1 363 5.57e-48 167
MsG0680035295.01.T01 MTR_4g016000 42.661 218 93 7 140 356 2 188 4.79e-47 160
MsG0680035295.01.T01 MTR_6g070880 42.500 240 114 7 12 236 27 257 1.04e-46 161
MsG0680035295.01.T01 MTR_6g071420 42.500 240 114 7 12 236 27 257 1.04e-46 161
MsG0680035295.01.T01 MTR_7g019250 41.004 239 108 7 149 385 206 413 5.43e-46 165
MsG0680035295.01.T01 MTR_3g018750 41.667 252 123 7 169 408 2 241 8.60e-46 158
MsG0680035295.01.T01 MTR_1g076810 43.600 250 116 6 9 251 10 241 1.32e-45 167
MsG0680035295.01.T01 MTR_5g097850 46.316 190 89 6 223 407 63 244 1.52e-45 158
MsG0680035295.01.T01 MTR_5g098950 41.048 229 90 6 137 365 90 273 7.85e-45 157
MsG0680035295.01.T01 MTR_2g104260 41.053 285 143 12 7 279 4 275 8.20e-44 154
MsG0680035295.01.T01 MTR_5g037190 41.549 284 124 11 2 276 1 251 4.92e-41 146
MsG0680035295.01.T01 MTR_6g009350 41.951 205 99 6 170 371 8 195 9.46e-41 143
MsG0680035295.01.T01 MTR_8g035690 35.640 289 148 10 141 407 30 302 8.93e-40 144
MsG0680035295.01.T01 MTR_6g465360 48.756 201 84 9 3 189 49 244 9.85e-40 144
MsG0680035295.01.T01 MTR_1g115205 38.406 276 116 10 1 265 17 249 1.87e-38 139
MsG0680035295.01.T01 MTR_3g030620 47.561 164 77 4 248 406 21 180 9.49e-38 135
MsG0680035295.01.T01 MTR_5g066420 45.033 151 78 2 250 397 1 149 6.02e-37 132
MsG0680035295.01.T01 MTR_6g079730 47.945 146 71 2 260 403 3 145 8.53e-35 126
MsG0680035295.01.T01 MTR_5g036250 59.140 93 34 2 311 400 12 103 1.25e-31 119
MsG0680035295.01.T01 MTR_5g096920 41.139 158 84 3 250 406 1 150 1.51e-30 115
MsG0680035295.01.T01 MTR_3g019290 37.850 214 84 8 14 224 11 178 4.93e-30 114
MsG0680035295.01.T01 MTR_7g101200 36.364 231 101 10 136 363 39 226 1.96e-29 114
MsG0680035295.01.T01 MTR_2g022020 49.123 114 55 2 292 404 5 116 2.48e-29 110
MsG0680035295.01.T01 MTR_7g017150 40.704 199 109 5 212 408 76 267 1.85e-27 110
MsG0680035295.01.T01 MTR_5g097540 38.953 172 93 6 194 365 73 232 3.45e-27 110
MsG0680035295.01.T01 MTR_7g017120 40.201 199 110 5 212 408 75 266 5.32e-27 108
MsG0680035295.01.T01 MTR_5g097660 46.847 111 57 2 296 404 6 116 9.00e-27 103
MsG0680035295.01.T01 MTR_1g047080 30.769 364 162 16 54 408 1 283 1.09e-26 108
MsG0680035295.01.T01 MTR_4g133170 26.425 386 215 15 19 387 6 339 3.49e-25 106
MsG0680035295.01.T01 MTR_5g086780 55.556 81 36 0 304 384 148 228 1.75e-24 101
MsG0680035295.01.T01 MTR_5g086780 54.430 79 29 2 1 79 1 72 6.98e-16 77.0
MsG0680035295.01.T01 MTR_0115s0020 28.302 424 245 17 1 400 3 391 1.87e-24 104
MsG0680035295.01.T01 MTR_5g096070 39.888 178 68 8 8 178 14 159 8.80e-23 94.4
MsG0680035295.01.T01 MTR_2g031720 25.628 398 241 18 19 403 8 363 4.23e-22 97.4
MsG0680035295.01.T01 MTR_5g097650 40.000 155 75 5 10 158 13 155 5.97e-22 92.0
MsG0680035295.01.T01 MTR_5g048160 28.341 434 223 19 5 400 1 384 6.38e-22 97.1
MsG0680035295.01.T01 MTR_2g024110 24.444 405 243 16 17 403 4 363 6.67e-22 96.7
MsG0680035295.01.T01 MTR_3g047580 39.474 152 60 5 5 149 1 127 9.52e-22 90.5
MsG0680035295.01.T01 MTR_1g097560 27.204 397 220 18 14 400 33 370 4.56e-21 94.4
MsG0680035295.01.T01 MTR_0064s0160 25.879 398 259 9 16 400 41 415 1.25e-20 94.0
MsG0680035295.01.T01 MTR_4g094400 48.598 107 39 3 248 341 8 111 1.40e-20 87.4
MsG0680035295.01.T01 MTR_1g097490 27.344 384 225 16 3 381 35 369 3.48e-20 92.0
MsG0680035295.01.T01 MTR_8g101580 26.923 390 219 18 25 400 54 391 3.80e-20 92.0
MsG0680035295.01.T01 MTR_2g028110 25.067 371 219 17 25 381 12 337 5.71e-20 91.3
MsG0680035295.01.T01 MTR_1g097330 26.972 393 206 18 20 390 19 352 8.99e-20 90.9
MsG0680035295.01.T01 MTR_2g026010 26.214 309 190 13 108 403 78 361 1.19e-19 90.5
MsG0680035295.01.T01 MTR_5g057790 25.575 348 179 12 20 348 49 335 1.23e-19 90.5
MsG0680035295.01.T01 MTR_5g057710 26.801 347 182 13 20 351 49 338 1.63e-19 90.1
MsG0680035295.01.T01 MTR_2g021150 25.916 382 232 13 20 390 17 358 1.71e-19 89.7
MsG0680035295.01.T01 MTR_6g027910 25.729 377 203 17 17 371 9 330 2.40e-19 89.4
MsG0680035295.01.T01 MTR_4g094365 27.543 403 227 19 18 406 10 361 4.49e-19 88.6
MsG0680035295.01.T01 MTR_4g116330 26.044 407 246 16 11 408 17 377 7.22e-19 87.8
MsG0680035295.01.T01 MTR_6g065980 25.000 328 178 12 20 341 19 284 1.56e-18 86.7
MsG0680035295.01.T01 MTR_4g021785 26.781 407 216 17 19 408 11 352 2.03e-18 86.3
MsG0680035295.01.T01 MTR_7g070440 29.191 346 181 15 17 344 7 306 4.12e-18 85.5
MsG0680035295.01.T01 MTR_3g013770 25.679 405 230 14 20 402 36 391 4.36e-18 85.9
MsG0680035295.01.T01 MTR_3g013740 28.412 359 193 18 12 351 39 352 5.35e-18 85.9
MsG0680035295.01.T01 MTR_3g009310 26.488 336 183 13 20 344 45 327 8.42e-18 85.1
MsG0680035295.01.T01 MTR_2g028130 25.148 338 211 13 20 344 8 316 9.71e-18 85.1
MsG0680035295.01.T01 MTR_4g023080 25.490 408 235 14 11 408 3 351 1.46e-17 84.0
MsG0680035295.01.T01 MTR_1g050305 51.220 82 35 2 310 386 22 103 3.61e-17 78.2
MsG0680035295.01.T01 MTR_0667s0010 23.559 399 230 17 13 380 2 356 4.10e-17 83.2
MsG0680035295.01.T01 MTR_2g046900 25.815 399 232 18 19 400 30 381 4.50e-17 82.8
MsG0680035295.01.T01 MTR_2g426070 24.750 400 244 18 25 403 14 377 5.98e-17 82.4
MsG0680035295.01.T01 MTR_1g050542 28.342 374 191 17 20 375 61 375 6.22e-17 82.4
MsG0680035295.01.T01 MTR_5g049560 41.611 149 68 7 54 185 1 147 7.10e-17 80.5
MsG0680035295.01.T01 MTR_3g036290 26.124 356 197 15 20 371 25 318 8.46e-17 81.6
MsG0680035295.01.T01 MTR_4g055060 28.319 339 180 16 20 344 33 322 9.47e-17 81.6
MsG0680035295.01.T01 MTR_1g068875 24.051 395 242 18 20 403 7 354 1.06e-16 81.6
MsG0680035295.01.T01 MTR_3g097190 64.815 54 19 0 328 381 28 81 1.30e-16 77.8
MsG0680035295.01.T01 MTR_3g436150 28.571 350 167 15 20 341 35 329 1.44e-16 81.3
MsG0680035295.01.T01 MTR_2g425980 23.573 403 255 16 20 403 8 376 2.06e-16 80.9
MsG0680035295.01.T01 MTR_2g031640 25.255 392 234 18 25 403 14 359 3.55e-16 80.1
MsG0680035295.01.T01 MTR_2g031680 24.557 395 240 17 13 396 2 349 5.08e-16 79.7
MsG0680035295.01.T01 MTR_8g467140 27.761 335 179 15 20 343 35 317 5.09e-16 79.0
MsG0680035295.01.T01 MTR_5g096050 43.925 107 47 3 250 346 1 104 6.24e-16 73.9
MsG0680035295.01.T01 MTR_1g061330 23.762 404 248 12 5 400 1 352 7.15e-16 79.3
MsG0680035295.01.T01 MTR_1g068860 24.194 372 225 15 20 378 7 334 1.39e-15 78.2
MsG0680035295.01.T01 MTR_5g011200 25.193 389 228 18 1 378 1 337 1.44e-15 78.2
MsG0680035295.01.T01 MTR_3g006670 27.439 328 191 13 20 343 52 336 3.72e-15 77.0
MsG0680035295.01.T01 MTR_2g021155 27.249 378 217 15 20 386 39 369 4.19e-15 77.8
MsG0680035295.01.T01 MTR_1g054725 26.549 339 202 15 15 348 18 314 5.35e-15 76.3
MsG0680035295.01.T01 MTR_7g055870 24.086 465 240 20 5 400 1 421 7.48e-15 76.3
MsG0680035295.01.T01 MTR_2g426090 24.750 400 241 20 25 403 14 374 7.78e-15 76.3
MsG0680035295.01.T01 MTR_4g117850 25.307 407 233 18 16 405 22 374 7.94e-15 75.9
MsG0680035295.01.T01 MTR_6g021880 26.750 400 209 21 28 409 31 364 8.23e-15 75.9
MsG0680035295.01.T01 MTR_3g036335 25.000 364 205 15 20 371 44 351 9.25e-15 75.9
MsG0680035295.01.T01 MTR_4g031770 29.706 340 180 21 20 351 7 295 9.82e-15 75.5
MsG0680035295.01.T01 MTR_5g007610 28.936 235 129 10 117 343 132 336 1.20e-14 75.5
MsG0680035295.01.T01 MTR_2g025420 24.294 354 198 13 20 343 9 322 1.49e-14 75.5
MsG0680035295.01.T01 MTR_5g057690 26.426 333 185 14 20 348 49 325 1.55e-14 75.1
MsG0680035295.01.T01 MTR_1g055375 25.862 406 237 19 15 400 2 363 1.71e-14 74.7
MsG0680035295.01.T01 MTR_5g057020 26.126 333 181 13 20 348 49 320 1.78e-14 74.7
MsG0680035295.01.T01 MTR_3g083640 25.938 320 182 13 25 340 63 331 1.85e-14 75.1
MsG0680035295.01.T01 MTR_3g007330 27.052 329 175 16 25 344 56 328 1.95e-14 74.7
MsG0680035295.01.T01 MTR_0044s0300 26.426 333 178 15 20 341 41 317 1.96e-14 74.7
MsG0680035295.01.T01 MTR_7g055930 24.242 462 243 20 5 400 1 421 2.36e-14 74.7
MsG0680035295.01.T01 MTR_4g030830 22.628 411 231 15 19 387 11 376 2.43e-14 74.7
MsG0680035295.01.T01 MTR_5g094360 41.284 109 51 5 145 252 40 136 2.97e-14 70.5
MsG0680035295.01.T01 MTR_2g046830 26.586 331 188 17 19 343 27 308 3.06e-14 74.3
MsG0680035295.01.T01 MTR_4g107820 23.833 407 224 15 9 395 28 368 3.08e-14 74.3
MsG0680035295.01.T01 MTR_4g107820 23.833 407 224 15 9 395 28 368 3.20e-14 73.9
MsG0680035295.01.T01 MTR_4g107780 23.833 407 224 15 9 395 28 368 3.20e-14 73.9
MsG0680035295.01.T01 MTR_2g021190 27.083 336 191 16 20 348 24 312 3.84e-14 73.9
MsG0680035295.01.T01 MTR_4g107780 23.833 407 224 15 9 395 28 368 4.08e-14 73.9
MsG0680035295.01.T01 MTR_3g083010 23.121 346 205 14 20 340 9 318 4.46e-14 73.9
MsG0680035295.01.T01 MTR_3g030250 25.070 359 198 13 20 371 40 334 8.13e-14 72.8
MsG0680035295.01.T01 MTR_2g021860 42.105 95 48 3 99 189 13 104 9.79e-14 68.6
MsG0680035295.01.T01 MTR_4g061340 26.667 360 179 18 20 355 29 327 1.17e-13 72.4
MsG0680035295.01.T01 MTR_3g009240 27.356 329 179 16 20 341 39 314 1.81e-13 71.6
MsG0680035295.01.T01 MTR_3g011100 26.113 337 189 15 20 344 238 526 2.30e-13 72.0
MsG0680035295.01.T01 MTR_7g013590 24.485 388 221 16 20 387 39 374 3.39e-13 71.2
MsG0680035295.01.T01 MTR_2g047832 26.301 346 190 16 19 343 31 332 4.50e-13 70.9
MsG0680035295.01.T01 MTR_2g031700 26.316 266 148 12 19 279 8 230 4.82e-13 69.7
MsG0680035295.01.T01 MTR_3g024040 25.824 364 198 18 25 379 39 339 5.16e-13 70.5
MsG0680035295.01.T01 MTR_3g014570 27.083 336 185 14 19 344 31 316 5.20e-13 70.5
MsG0680035295.01.T01 MTR_0760s0010 26.462 325 168 14 25 339 55 318 6.18e-13 70.1
MsG0680035295.01.T01 MTR_3g030330 24.695 328 185 12 20 341 23 294 6.92e-13 70.1
MsG0680035295.01.T01 MTR_6g027890 25.279 269 154 11 115 371 49 282 7.93e-13 69.3
MsG0680035295.01.T01 MTR_3g009260 27.356 329 176 16 20 341 44 316 9.59e-13 69.7
MsG0680035295.01.T01 MTR_8g041440 50.725 69 32 1 8 74 6 74 1.08e-12 64.7
MsG0680035295.01.T01 MTR_4g023130 24.324 407 200 14 11 408 3 310 1.19e-12 68.6
MsG0680035295.01.T01 MTR_4g117720 26.623 308 170 14 119 409 108 376 1.67e-12 68.9
MsG0680035295.01.T01 MTR_4g117770 24.566 403 246 14 16 408 10 364 1.99e-12 68.6
MsG0680035295.01.T01 MTR_4g117810 24.566 403 246 14 16 408 10 364 1.99e-12 68.6
MsG0680035295.01.T01 MTR_3g006570 24.309 362 208 17 20 371 24 329 2.07e-12 68.6
MsG0680035295.01.T01 MTR_6g053260 25.797 345 200 15 7 341 324 622 2.89e-12 68.9
MsG0680035295.01.T01 MTR_1g009110 23.955 359 215 17 5 347 1 317 2.94e-12 68.2
MsG0680035295.01.T01 MTR_3g010870 25.208 361 200 15 20 371 40 339 3.16e-12 68.2
MsG0680035295.01.T01 MTR_3g006500 24.740 384 204 17 20 386 20 335 3.17e-12 67.8
MsG0680035295.01.T01 MTR_4g070550 23.096 394 234 17 20 383 8 362 3.34e-12 68.2
MsG0680035295.01.T01 MTR_5g070130 23.358 411 256 11 9 404 3 369 5.46e-12 67.4
MsG0680035295.01.T01 MTR_5g009060 26.420 352 194 14 20 343 28 342 5.64e-12 67.4
MsG0680035295.01.T01 MTR_3g058480 28.409 176 84 7 118 285 141 282 6.22e-12 66.6
MsG0680035295.01.T01 MTR_4g116340 28.629 248 112 8 20 256 39 232 6.33e-12 65.9
MsG0680035295.01.T01 MTR_2g021252 22.074 376 188 14 20 371 50 344 6.39e-12 67.0
MsG0680035295.01.T01 MTR_3g058440 28.058 278 139 13 25 285 43 276 6.75e-12 66.2
MsG0680035295.01.T01 MTR_6g053240 25.373 335 180 13 25 341 36 318 8.47e-12 66.6
MsG0680035295.01.T01 MTR_3g024130 29.130 230 124 10 118 344 58 251 9.15e-12 66.2
MsG0680035295.01.T01 MTR_7g056710 26.844 339 171 14 25 341 26 309 1.34e-11 66.2
MsG0680035295.01.T01 MTR_3g047540 49.275 69 30 2 218 286 6 69 1.38e-11 60.8
MsG0680035295.01.T01 MTR_2g078900 25.000 328 188 12 20 341 36 311 1.69e-11 65.5
MsG0680035295.01.T01 MTR_8g102520 29.181 281 151 12 135 404 72 315 1.94e-11 65.1
MsG0680035295.01.T01 MTR_4g117780 24.242 396 250 12 19 408 13 364 2.19e-11 65.5
MsG0680035295.01.T01 MTR_8g099460 25.183 409 231 20 20 403 8 366 3.13e-11 65.1
MsG0680035295.01.T01 MTR_3g034160 24.582 419 248 19 11 409 3 373 9.24e-11 63.5
MsG0680035295.01.T01 MTR_3g058470 24.167 360 174 15 25 362 45 327 9.80e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035295.01.T01 AT3G06240 25.990 404 222 17 20 387 39 401 1.04e-17 85.1
MsG0680035295.01.T01 AT4G22390 24.847 326 189 15 87 386 54 349 1.33e-11 66.2
MsG0680035295.01.T01 AT4G22390 24.847 326 189 15 87 386 54 349 1.68e-11 65.9

Find 86 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGTGTTGTATTTGCTTTC+TGG 0.062575 6:-101653379 MsG0680035295.01.T01:CDS
TACATTTCACATATCAATTT+TGG 0.082571 6:-101652675 MsG0680035295.01.T01:CDS
CACCAAGCTCCTCCATCTTC+TGG 0.140699 6:+101652507 None:intergenic
CGATACATGTTCATGAAAAT+AGG 0.168623 6:+101653487 None:intergenic
TCCAACTATCGACGAATTTA+AGG 0.198800 6:-101653218 MsG0680035295.01.T01:CDS
CTTCCCATTGGAGGAATAAA+TGG 0.216291 6:-101652434 MsG0680035295.01.T01:CDS
CGATATACGCTTCATGGATT+TGG 0.245312 6:-101653142 MsG0680035295.01.T01:CDS
AAGTCAAAGGACACCAAATA+TGG 0.258969 6:+101652839 None:intergenic
TGAAGATAATGACCCATATT+TGG 0.270346 6:-101652852 MsG0680035295.01.T01:CDS
GAGTTTCTACGCTCTTTAAA+AGG 0.277701 6:+101653316 None:intergenic
TGGACTAAACTCTTCATTCT+TGG 0.283281 6:-101652629 MsG0680035295.01.T01:CDS
CCTGGCATTGATCATCCTAT+TGG 0.297554 6:-101652599 MsG0680035295.01.T01:CDS
TTTGCTCGATATACGCTTCA+TGG 0.303406 6:-101653148 MsG0680035295.01.T01:CDS
CTCTTGGAGGAAACTTGATT+TGG 0.315545 6:-101652960 MsG0680035295.01.T01:CDS
CCTATTGGAGTGGGAAATAA+TGG 0.322048 6:-101652584 MsG0680035295.01.T01:CDS
TCCTCCAAGAGTTACTTCTT+AGG 0.344179 6:+101652972 None:intergenic
GCTTGGTGTCAAAGGCTATA+TGG 0.348331 6:-101652492 MsG0680035295.01.T01:CDS
AATCATATTCATAATGATAT+TGG 0.348507 6:-101653595 MsG0680035295.01.T01:CDS
TTTGAGAATAAAGTCAAGTT+AGG 0.352146 6:-101653349 MsG0680035295.01.T01:CDS
GGACTAAACTCTTCATTCTT+GGG 0.353699 6:-101652628 MsG0680035295.01.T01:CDS
GATACATGTTCATGAAAATA+GGG 0.354057 6:+101653488 None:intergenic
ACCTTAAATTCGTCGATAGT+TGG 0.366435 6:+101653217 None:intergenic
CCATTATTTCCCACTCCAAT+AGG 0.368274 6:+101652584 None:intergenic
ACCAAGCTCCTCCATCTTCT+GGG 0.384465 6:+101652508 None:intergenic
AACACTTGAAGATCATCTAA+TGG 0.395322 6:+101653394 None:intergenic
TAGAGGCAATTTCGAGAGAA+TGG 0.406497 6:+101653567 None:intergenic
GGTATTTATACTTATAATGT+AGG 0.410188 6:-101652926 MsG0680035295.01.T01:CDS
GTTGTACAGATGTTGTATTA+TGG 0.412437 6:-101653243 MsG0680035295.01.T01:CDS
ATTTGAATGGAGTGTGTCAT+TGG 0.422750 6:-101652892 MsG0680035295.01.T01:CDS
GAGATGATGACGAACTGGTT+TGG 0.427092 6:-101652544 MsG0680035295.01.T01:CDS
GGATTCTCTTTCGACTGAAA+AGG 0.444921 6:-101653623 MsG0680035295.01.T01:CDS
CAGAAGAGATGATGACGAAC+TGG 0.451171 6:-101652549 MsG0680035295.01.T01:CDS
TTATTCCTCCAATGGGAAGA+TGG 0.453988 6:+101652438 None:intergenic
TTTGGGTGAAGTTGGTGTAA+AGG 0.460837 6:-101652657 MsG0680035295.01.T01:CDS
ACCTTGGGCTCTAACTCAGC+AGG 0.475042 6:+101653181 None:intergenic
ATATTGGGTTCCGTTATTAA+CGG 0.480710 6:-101653286 MsG0680035295.01.T01:CDS
GGATGATCAATGCCAGGAAA+AGG 0.481214 6:+101652605 None:intergenic
TTTAAAGAGCGTAGAAACTC+TGG 0.482519 6:-101653313 MsG0680035295.01.T01:CDS
GAATGGAGTGTGTCATTGGT+GGG 0.483134 6:-101652888 MsG0680035295.01.T01:CDS
TAACCATTTATTCCTCCAAT+GGG 0.484776 6:+101652431 None:intergenic
TTAACCATTTATTCCTCCAA+TGG 0.486975 6:+101652430 None:intergenic
AGCAAACTCATAACGTACCT+TGG 0.489901 6:+101653165 None:intergenic
GGTGTCTATGTGTATTTGAA+TGG 0.491909 6:-101652905 MsG0680035295.01.T01:CDS
ACAACCTAAGAAGTAACTCT+TGG 0.492222 6:-101652976 MsG0680035295.01.T01:CDS
CTACGCTCTTTAAAAGGAGG+TGG 0.492591 6:+101653322 None:intergenic
CAGTGTTAGAGATGACTATA+AGG 0.494503 6:-101653113 MsG0680035295.01.T01:CDS
TTAGTTCCGTAAGTAAATCA+TGG 0.495085 6:-101653528 MsG0680035295.01.T01:CDS
GCAAACTCATAACGTACCTT+GGG 0.495313 6:+101653166 None:intergenic
ACCTAAGAAGTAACTCTTGG+AGG 0.497058 6:-101652973 MsG0680035295.01.T01:CDS
TGAATGGAGTGTGTCATTGG+TGG 0.498650 6:-101652889 MsG0680035295.01.T01:CDS
AGTCAAAGGACACCAAATAT+GGG 0.507263 6:+101652840 None:intergenic
GCATGACCATGATTTACTTA+CGG 0.512130 6:+101653522 None:intergenic
GACTTGGCAGAGTCTGTTGT+AGG 0.515669 6:+101653416 None:intergenic
TTGTCAGGTAGTCATTTACA+AGG 0.523582 6:-101652465 MsG0680035295.01.T01:CDS
ATGGAGGAGCTTGGTGTCAA+AGG 0.525184 6:-101652500 MsG0680035295.01.T01:CDS
TGAAGATCATCTAATGGACT+TGG 0.525791 6:+101653400 None:intergenic
ACAAACAATTCCGTTAATAA+CGG 0.528249 6:+101653276 None:intergenic
AAGGAAAGCCATCTTCCCAT+TGG 0.528252 6:-101652446 MsG0680035295.01.T01:CDS
ACCCAGAAGATGGAGGAGCT+TGG 0.531157 6:-101652509 MsG0680035295.01.T01:CDS
GACTATAAAATTAAAAGTGA+TGG 0.531253 6:-101653055 MsG0680035295.01.T01:CDS
AAGTTGGTGTAAAGGAGTCT+TGG 0.532885 6:-101652649 MsG0680035295.01.T01:CDS
TAACTTGAGAACCCAGAAGA+TGG 0.535211 6:-101652519 MsG0680035295.01.T01:CDS
TGTATTTGCTTTCTGGTGAG+AGG 0.553262 6:-101653372 MsG0680035295.01.T01:CDS
CCCTGCTGAGTTAGAGCCCA+AGG 0.557534 6:-101653182 MsG0680035295.01.T01:CDS
CACCTCCTTGCTTAAGTCAA+AGG 0.558121 6:+101652826 None:intergenic
CGCTACGATGATGAAATCGA+TGG 0.564261 6:-101653644 None:intergenic
AAAATATCAGTCAAAGCTAA+GGG 0.569822 6:+101652785 None:intergenic
TAGACGTGAGATACACTTGA+CGG 0.570133 6:-101652744 MsG0680035295.01.T01:CDS
CCAATAGGATGATCAATGCC+AGG 0.574982 6:+101652599 None:intergenic
TCGTCACGTGACACGCTAGT+TGG 0.576097 6:+101653013 None:intergenic
TTTCTACGCTCTTTAAAAGG+AGG 0.581228 6:+101653319 None:intergenic
ATACAACATCTGTACAACTA+CGG 0.583718 6:+101653248 None:intergenic
GAAAGCCATCTTCCCATTGG+AGG 0.587800 6:-101652443 MsG0680035295.01.T01:CDS
GGTGTCCTTTGACTTAAGCA+AGG 0.592013 6:-101652831 MsG0680035295.01.T01:CDS
TTGGCAGAGTCTGTTGTAGG+AGG 0.601405 6:+101653419 None:intergenic
ATTGATCATCCTATTGGAGT+GGG 0.602521 6:-101652593 MsG0680035295.01.T01:CDS
GCGTGTCACGTGACGATGTG+TGG 0.603092 6:-101653006 MsG0680035295.01.T01:CDS
CATTGATCATCCTATTGGAG+TGG 0.609250 6:-101652594 MsG0680035295.01.T01:CDS
TTTCATATCTGATGCTTACG+AGG 0.632612 6:-101653458 MsG0680035295.01.T01:CDS
CTTGAGAACCCAGAAGATGG+AGG 0.653145 6:-101652516 MsG0680035295.01.T01:CDS
CCTTGGGCTCTAACTCAGCA+GGG 0.655854 6:+101653182 None:intergenic
CGTGTCACGTGACGATGTGT+GGG 0.658175 6:-101653005 MsG0680035295.01.T01:CDS
CTTGATTTGGACATGCCTTG+TGG 0.667697 6:-101652947 MsG0680035295.01.T01:CDS
GTCCTTTGACTTAAGCAAGG+AGG 0.681294 6:-101652828 MsG0680035295.01.T01:CDS
TCTGATGCTTACGAGGACGA+TGG 0.691804 6:-101653451 MsG0680035295.01.T01:CDS
TTATAAGTATAAATACCACA+AGG 0.759200 6:+101652932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCATATTCATAATGATAT+TGG - Chr6:101652472-101652491 MsG0680035295.01.T01:CDS 15.0%
!! GACTATAAAATTAAAAGTGA+TGG - Chr6:101653012-101653031 MsG0680035295.01.T01:CDS 20.0%
!! GGTATTTATACTTATAATGT+AGG - Chr6:101653141-101653160 MsG0680035295.01.T01:CDS 20.0%
!! TTATAAGTATAAATACCACA+AGG + Chr6:101653138-101653157 None:intergenic 20.0%
!!! ACATTTCACATATCAATTTT+GGG - Chr6:101653393-101653412 MsG0680035295.01.T01:CDS 20.0%
!!! TACATTTCACATATCAATTT+TGG - Chr6:101653392-101653411 MsG0680035295.01.T01:CDS 20.0%
! AAAAATATCAGTCAAAGCTA+AGG + Chr6:101653286-101653305 None:intergenic 25.0%
! AAAATATCAGTCAAAGCTAA+GGG + Chr6:101653285-101653304 None:intergenic 25.0%
! ACAAACAATTCCGTTAATAA+CGG + Chr6:101652794-101652813 None:intergenic 25.0%
! GATACATGTTCATGAAAATA+GGG + Chr6:101652582-101652601 None:intergenic 25.0%
! TTTGAGAATAAAGTCAAGTT+AGG - Chr6:101652718-101652737 MsG0680035295.01.T01:CDS 25.0%
!!! AGAAACTCTGGTTTTATATT+GGG - Chr6:101652766-101652785 MsG0680035295.01.T01:CDS 25.0%
!!! TAGAAACTCTGGTTTTATAT+TGG - Chr6:101652765-101652784 MsG0680035295.01.T01:CDS 25.0%
AACACTTGAAGATCATCTAA+TGG + Chr6:101652676-101652695 None:intergenic 30.0%
ATACAACATCTGTACAACTA+CGG + Chr6:101652822-101652841 None:intergenic 30.0%
ATATTGGGTTCCGTTATTAA+CGG - Chr6:101652781-101652800 MsG0680035295.01.T01:CDS 30.0%
CGATACATGTTCATGAAAAT+AGG + Chr6:101652583-101652602 None:intergenic 30.0%
GTTGTACAGATGTTGTATTA+TGG - Chr6:101652824-101652843 MsG0680035295.01.T01:CDS 30.0%
TAACCATTTATTCCTCCAAT+GGG + Chr6:101653639-101653658 None:intergenic 30.0%
TGAAGATAATGACCCATATT+TGG - Chr6:101653215-101653234 MsG0680035295.01.T01:CDS 30.0%
TTAACCATTTATTCCTCCAA+TGG + Chr6:101653640-101653659 None:intergenic 30.0%
TTAGTTCCGTAAGTAAATCA+TGG - Chr6:101652539-101652558 MsG0680035295.01.T01:CDS 30.0%
! AATCGCTTCAAAGATTTTAG+AGG + Chr6:101652520-101652539 None:intergenic 30.0%
!! ATATCAATTTTGGGTGAAGT+TGG - Chr6:101653402-101653421 MsG0680035295.01.T01:CDS 30.0%
AAGTCAAAGGACACCAAATA+TGG + Chr6:101653231-101653250 None:intergenic 35.0%
ACAACCTAAGAAGTAACTCT+TGG - Chr6:101653091-101653110 MsG0680035295.01.T01:CDS 35.0%
ACCTTAAATTCGTCGATAGT+TGG + Chr6:101652853-101652872 None:intergenic 35.0%
AGTCAAAGGACACCAAATAT+GGG + Chr6:101653230-101653249 None:intergenic 35.0%
ATTGATCATCCTATTGGAGT+GGG - Chr6:101653474-101653493 MsG0680035295.01.T01:CDS 35.0%
ATTTGAATGGAGTGTGTCAT+TGG - Chr6:101653175-101653194 MsG0680035295.01.T01:CDS 35.0%
CAGTGTTAGAGATGACTATA+AGG - Chr6:101652954-101652973 MsG0680035295.01.T01:CDS 35.0%
GAGTTTCTACGCTCTTTAAA+AGG + Chr6:101652754-101652773 None:intergenic 35.0%
GCATGACCATGATTTACTTA+CGG + Chr6:101652548-101652567 None:intergenic 35.0%
GGACTAAACTCTTCATTCTT+GGG - Chr6:101653439-101653458 MsG0680035295.01.T01:CDS 35.0%
GGTGTCTATGTGTATTTGAA+TGG - Chr6:101653162-101653181 MsG0680035295.01.T01:CDS 35.0%
TCCAACTATCGACGAATTTA+AGG - Chr6:101652849-101652868 MsG0680035295.01.T01:CDS 35.0%
TGGACTAAACTCTTCATTCT+TGG - Chr6:101653438-101653457 MsG0680035295.01.T01:CDS 35.0%
TTGTCAGGTAGTCATTTACA+AGG - Chr6:101653602-101653621 MsG0680035295.01.T01:CDS 35.0%
TTTCATATCTGATGCTTACG+AGG - Chr6:101652609-101652628 MsG0680035295.01.T01:CDS 35.0%
! AGGCTATATGGATTTTTGTC+AGG - Chr6:101653587-101653606 MsG0680035295.01.T01:CDS 35.0%
! CAAGTGTTGTATTTGCTTTC+TGG - Chr6:101652688-101652707 MsG0680035295.01.T01:CDS 35.0%
! TTTAAAGAGCGTAGAAACTC+TGG - Chr6:101652754-101652773 MsG0680035295.01.T01:CDS 35.0%
! TTTCTACGCTCTTTAAAAGG+AGG + Chr6:101652751-101652770 None:intergenic 35.0%
!! TGAAGATCATCTAATGGACT+TGG + Chr6:101652670-101652689 None:intergenic 35.0%
ACCTAAGAAGTAACTCTTGG+AGG - Chr6:101653094-101653113 MsG0680035295.01.T01:CDS 40.0%
AGCAAACTCATAACGTACCT+TGG + Chr6:101652905-101652924 None:intergenic 40.0%
CATTGATCATCCTATTGGAG+TGG - Chr6:101653473-101653492 MsG0680035295.01.T01:CDS 40.0%
CCATTATTTCCCACTCCAAT+AGG + Chr6:101653486-101653505 None:intergenic 40.0%
CCTATTGGAGTGGGAAATAA+TGG - Chr6:101653483-101653502 MsG0680035295.01.T01:CDS 40.0%
CGATATACGCTTCATGGATT+TGG - Chr6:101652925-101652944 MsG0680035295.01.T01:CDS 40.0%
CTCTTGGAGGAAACTTGATT+TGG - Chr6:101653107-101653126 MsG0680035295.01.T01:CDS 40.0%
CTTCCCATTGGAGGAATAAA+TGG - Chr6:101653633-101653652 MsG0680035295.01.T01:CDS 40.0%
GCAAACTCATAACGTACCTT+GGG + Chr6:101652904-101652923 None:intergenic 40.0%
GGATTCTCTTTCGACTGAAA+AGG - Chr6:101652444-101652463 MsG0680035295.01.T01:CDS 40.0%
TAACTTGAGAACCCAGAAGA+TGG - Chr6:101653548-101653567 MsG0680035295.01.T01:CDS 40.0%
TAGACGTGAGATACACTTGA+CGG - Chr6:101653323-101653342 MsG0680035295.01.T01:CDS 40.0%
TAGAGGCAATTTCGAGAGAA+TGG + Chr6:101652503-101652522 None:intergenic 40.0%
TCCTCCAAGAGTTACTTCTT+AGG + Chr6:101653098-101653117 None:intergenic 40.0%
TTATTCCTCCAATGGGAAGA+TGG + Chr6:101653632-101653651 None:intergenic 40.0%
TTTGCTCGATATACGCTTCA+TGG - Chr6:101652919-101652938 MsG0680035295.01.T01:CDS 40.0%
! TGTATTTGCTTTCTGGTGAG+AGG - Chr6:101652695-101652714 MsG0680035295.01.T01:CDS 40.0%
!! AAGTTGGTGTAAAGGAGTCT+TGG - Chr6:101653418-101653437 MsG0680035295.01.T01:CDS 40.0%
!! TTTGGGTGAAGTTGGTGTAA+AGG - Chr6:101653410-101653429 MsG0680035295.01.T01:CDS 40.0%
AAGGAAAGCCATCTTCCCAT+TGG - Chr6:101653621-101653640 MsG0680035295.01.T01:CDS 45.0%
CACCTCCTTGCTTAAGTCAA+AGG + Chr6:101653244-101653263 None:intergenic 45.0%
CCAATAGGATGATCAATGCC+AGG + Chr6:101653471-101653490 None:intergenic 45.0%
GGATGATCAATGCCAGGAAA+AGG + Chr6:101653465-101653484 None:intergenic 45.0%
! CAGAAGAGATGATGACGAAC+TGG - Chr6:101653518-101653537 MsG0680035295.01.T01:CDS 45.0%
! CTACGCTCTTTAAAAGGAGG+TGG + Chr6:101652748-101652767 None:intergenic 45.0%
! GAATGGAGTGTGTCATTGGT+GGG - Chr6:101653179-101653198 MsG0680035295.01.T01:CDS 45.0%
! GAGATGATGACGAACTGGTT+TGG - Chr6:101653523-101653542 MsG0680035295.01.T01:CDS 45.0%
! GGTGTCCTTTGACTTAAGCA+AGG - Chr6:101653236-101653255 MsG0680035295.01.T01:CDS 45.0%
! GTCCTTTGACTTAAGCAAGG+AGG - Chr6:101653239-101653258 MsG0680035295.01.T01:CDS 45.0%
! TCTAACTCAGCAGGGCTTTT+AGG + Chr6:101652880-101652899 None:intergenic 45.0%
! TGAATGGAGTGTGTCATTGG+TGG - Chr6:101653178-101653197 MsG0680035295.01.T01:CDS 45.0%
! TTCATTCTTGGGCCTTTTCC+TGG - Chr6:101653450-101653469 MsG0680035295.01.T01:CDS 45.0%
!! CCTGGCATTGATCATCCTAT+TGG - Chr6:101653468-101653487 MsG0680035295.01.T01:CDS 45.0%
!! CTTGATTTGGACATGCCTTG+TGG - Chr6:101653120-101653139 MsG0680035295.01.T01:CDS 45.0%
!! GCTTGGTGTCAAAGGCTATA+TGG - Chr6:101653575-101653594 MsG0680035295.01.T01:CDS 45.0%
ACCAAGCTCCTCCATCTTCT+GGG + Chr6:101653562-101653581 None:intergenic 50.0%
CTTGAGAACCCAGAAGATGG+AGG - Chr6:101653551-101653570 MsG0680035295.01.T01:CDS 50.0%
GAAAGCCATCTTCCCATTGG+AGG - Chr6:101653624-101653643 MsG0680035295.01.T01:CDS 50.0%
GACTTGGCAGAGTCTGTTGT+AGG + Chr6:101652654-101652673 None:intergenic 50.0%
TCTGATGCTTACGAGGACGA+TGG - Chr6:101652616-101652635 MsG0680035295.01.T01:CDS 50.0%
TTGGCAGAGTCTGTTGTAGG+AGG + Chr6:101652651-101652670 None:intergenic 50.0%
!! ACTCAGCAGGGCTTTTAGGA+AGG + Chr6:101652876-101652895 None:intergenic 50.0%
!! ATGGAGGAGCTTGGTGTCAA+AGG - Chr6:101653567-101653586 MsG0680035295.01.T01:CDS 50.0%
ACCCAGAAGATGGAGGAGCT+TGG - Chr6:101653558-101653577 MsG0680035295.01.T01:CDS 55.0%
CACCAAGCTCCTCCATCTTC+TGG + Chr6:101653563-101653582 None:intergenic 55.0%
CGTGTCACGTGACGATGTGT+GGG - Chr6:101653062-101653081 MsG0680035295.01.T01:CDS 55.0%
TCGTCACGTGACACGCTAGT+TGG + Chr6:101653057-101653076 None:intergenic 55.0%
! ACCTTGGGCTCTAACTCAGC+AGG + Chr6:101652889-101652908 None:intergenic 55.0%
! CCTTGGGCTCTAACTCAGCA+GGG + Chr6:101652888-101652907 None:intergenic 55.0%
CCCTGCTGAGTTAGAGCCCA+AGG - Chr6:101652885-101652904 MsG0680035295.01.T01:CDS 60.0%
GCGTGTCACGTGACGATGTG+TGG - Chr6:101653061-101653080 MsG0680035295.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 101652430 101653659 101652430 ID=MsG0680035295.01;Name=MsG0680035295.01
Chr6 mRNA 101652430 101653659 101652430 ID=MsG0680035295.01.T01;Parent=MsG0680035295.01;Name=MsG0680035295.01.T01;_AED=0.15;_eAED=0.15;_QI=0|-1|0|1|-1|1|1|0|409
Chr6 exon 101652430 101653659 101652430 ID=MsG0680035295.01.T01:exon:20767;Parent=MsG0680035295.01.T01
Chr6 CDS 101652430 101653659 101652430 ID=MsG0680035295.01.T01:cds;Parent=MsG0680035295.01.T01
Gene Sequence

>MsG0680035295.01.T01

ATGATGAAATCGATGGATTCTCTTTCGACTGAAAAGGTTAGCAATCATATTCATAATGATATTGGACTTTCCATTCTCTCGAAATTGCCTCTAAAATCTTTGAAGCGATTTAGTTCCGTAAGTAAATCATGGTCATGCTTATTTGAAAACCCTATTTTCATGAACATGTATCGCAATAGTTTCATATCTGATGCTTACGAGGACGATGGTTCATGTCTCCTCCTACAACAGACTCTGCCAAGTCCATTAGATGATCTTCAAGTGTTGTATTTGCTTTCTGGTGAGAGGTTTGAGAATAAAGTCAAGTTAGGTTCGCCACCTCCTTTTAAAGAGCGTAGAAACTCTGGTTTTATATTGGGTTCCGTTATTAACGGAATTGTTTGTCTTTACCGTAGTTGTACAGATGTTGTATTATGGAATCCAACTATCGACGAATTTAAGGTCCTTCCTAAAAGCCCTGCTGAGTTAGAGCCCAAGGTACGTTATGAGTTTGCTCGATATACGCTTCATGGATTTGGTTATGACAGTGTTAGAGATGACTATAAGGTCATTCGACATGTACATTATTATTTACATCTATCTGACTATAAAATTAAAAGTGATGGTTGTGACGCATTAAGTTTGCCAACTAGCGTGTCACGTGACGATGTGTGGGAGATATACAACCTAAGAAGTAACTCTTGGAGGAAACTTGATTTGGACATGCCTTGTGGTATTTATACTTATAATGTAGGTGTCTATGTGTATTTGAATGGAGTGTGTCATTGGTGGGTTGACGACGACAATGAAGATAATGACCCATATTTGGTGTCCTTTGACTTAAGCAAGGAGGTGTTTTGTAAAACACTCATACCCTTAGCTTTGACTGATATTTTTTATTCTGAATATGAGATTAGACGTGAGATACACTTGACGGTGTTAAATGACAACATTGCTTTGATCTCATATTATGACGAATCTGCTACATTTCACATATCAATTTTGGGTGAAGTTGGTGTAAAGGAGTCTTGGACTAAACTCTTCATTCTTGGGCCTTTTCCTGGCATTGATCATCCTATTGGAGTGGGAAATAATGGTGATTTATTCTTCAGAAGAGATGATGACGAACTGGTTTGGCTTAACTTGAGAACCCAGAAGATGGAGGAGCTTGGTGTCAAAGGCTATATGGATTTTTGTCAGGTAGTCATTTACAAGGAAAGCCATCTTCCCATTGGAGGAATAAATGGTTAA

Protein sequence

>MsG0680035295.01.T01

MMKSMDSLSTEKVSNHIHNDIGLSILSKLPLKSLKRFSSVSKSWSCLFENPIFMNMYRNSFISDAYEDDGSCLLLQQTLPSPLDDLQVLYLLSGERFENKVKLGSPPPFKERRNSGFILGSVINGIVCLYRSCTDVVLWNPTIDEFKVLPKSPAELEPKVRYEFARYTLHGFGYDSVRDDYKVIRHVHYYLHLSDYKIKSDGCDALSLPTSVSRDDVWEIYNLRSNSWRKLDLDMPCGIYTYNVGVYVYLNGVCHWWVDDDNEDNDPYLVSFDLSKEVFCKTLIPLALTDIFYSEYEIRREIHLTVLNDNIALISYYDESATFHISILGEVGVKESWTKLFILGPFPGIDHPIGVGNNGDLFFRRDDDELVWLNLRTQKMEELGVKGYMDFCQVVIYKESHLPIGGING*