Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034683.01.T01 | XP_003597950.2 | 62.315 | 406 | 140 | 7 | 1 | 404 | 1 | 395 | 6.34E-167 | 484 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034683.01.T01 | Q8GXC7 | 22.196 | 419 | 252 | 15 | 15 | 397 | 36 | 416 | 1.58E-15 | 81.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034683.01.T01 | G7IIB4 | 62.315 | 406 | 140 | 7 | 1 | 404 | 1 | 395 | 3.03e-167 | 484 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034683.01.T01 | MTR_2g104340 | 62.315 | 406 | 140 | 7 | 1 | 404 | 1 | 395 | 7.67e-171 | 484 |
MsG0680034683.01.T01 | MTR_8g041270 | 61.650 | 412 | 143 | 7 | 1 | 404 | 1 | 405 | 3.75e-168 | 477 |
MsG0680034683.01.T01 | MTR_4g055820 | 63.944 | 355 | 124 | 3 | 8 | 361 | 7 | 358 | 2.17e-158 | 450 |
MsG0680034683.01.T01 | MTR_2g104280 | 58.272 | 405 | 156 | 5 | 7 | 404 | 6 | 404 | 4.53e-154 | 441 |
MsG0680034683.01.T01 | MTR_7g069550 | 50.122 | 411 | 181 | 12 | 1 | 404 | 1 | 394 | 2.93e-120 | 355 |
MsG0680034683.01.T01 | MTR_2g022000 | 45.038 | 393 | 196 | 6 | 10 | 387 | 11 | 398 | 1.68e-110 | 331 |
MsG0680034683.01.T01 | MTR_0129s0070 | 46.192 | 407 | 200 | 8 | 2 | 404 | 4 | 395 | 9.84e-110 | 328 |
MsG0680034683.01.T01 | MTR_5g072060 | 50.131 | 383 | 161 | 8 | 13 | 392 | 4 | 359 | 2.43e-109 | 334 |
MsG0680034683.01.T01 | MTR_2g021800 | 44.010 | 409 | 197 | 8 | 10 | 397 | 11 | 408 | 3.84e-106 | 320 |
MsG0680034683.01.T01 | MTR_2g038680 | 45.131 | 421 | 194 | 11 | 5 | 404 | 6 | 410 | 1.84e-105 | 318 |
MsG0680034683.01.T01 | MTR_2g064950 | 48.454 | 388 | 166 | 11 | 9 | 384 | 4 | 369 | 7.90e-105 | 315 |
MsG0680034683.01.T01 | MTR_5g097330 | 44.794 | 413 | 197 | 8 | 6 | 404 | 7 | 402 | 3.04e-104 | 314 |
MsG0680034683.01.T01 | MTR_0129s0120 | 44.118 | 408 | 211 | 7 | 2 | 406 | 4 | 397 | 2.89e-103 | 311 |
MsG0680034683.01.T01 | MTR_2g021770 | 43.659 | 410 | 210 | 8 | 8 | 404 | 5 | 406 | 2.03e-101 | 307 |
MsG0680034683.01.T01 | MTR_8g013000 | 48.199 | 361 | 171 | 8 | 9 | 364 | 4 | 353 | 5.07e-101 | 306 |
MsG0680034683.01.T01 | MTR_8g063440 | 46.020 | 402 | 190 | 12 | 5 | 402 | 2 | 380 | 3.14e-100 | 303 |
MsG0680034683.01.T01 | MTR_5g074800 | 47.765 | 358 | 159 | 9 | 55 | 404 | 2 | 339 | 1.81e-99 | 300 |
MsG0680034683.01.T01 | MTR_0129s0050 | 43.294 | 425 | 199 | 13 | 3 | 404 | 2 | 407 | 3.90e-99 | 301 |
MsG0680034683.01.T01 | MTR_6g079770 | 44.153 | 419 | 202 | 11 | 6 | 403 | 8 | 415 | 1.26e-97 | 298 |
MsG0680034683.01.T01 | MTR_0054s0100 | 43.269 | 416 | 207 | 10 | 4 | 404 | 6 | 407 | 1.35e-97 | 297 |
MsG0680034683.01.T01 | MTR_0054s0090 | 43.478 | 414 | 205 | 10 | 5 | 404 | 7 | 405 | 2.49e-96 | 294 |
MsG0680034683.01.T01 | MTR_7g079640 | 46.134 | 388 | 171 | 11 | 1 | 384 | 1 | 354 | 8.62e-96 | 292 |
MsG0680034683.01.T01 | MTR_8g464770 | 43.445 | 389 | 196 | 9 | 10 | 397 | 7 | 372 | 1.19e-95 | 291 |
MsG0680034683.01.T01 | MTR_0134s0060 | 43.735 | 423 | 204 | 12 | 6 | 406 | 3 | 413 | 2.28e-95 | 292 |
MsG0680034683.01.T01 | MTR_8g012090 | 44.531 | 384 | 145 | 9 | 5 | 375 | 6 | 334 | 7.54e-95 | 288 |
MsG0680034683.01.T01 | MTR_4g117550 | 42.786 | 402 | 188 | 10 | 7 | 404 | 9 | 372 | 1.15e-94 | 289 |
MsG0680034683.01.T01 | MTR_6g086825 | 42.336 | 411 | 199 | 7 | 13 | 404 | 68 | 459 | 1.25e-94 | 291 |
MsG0680034683.01.T01 | MTR_7g017130 | 43.171 | 410 | 194 | 10 | 9 | 404 | 12 | 396 | 6.70e-94 | 288 |
MsG0680034683.01.T01 | MTR_2g021950 | 43.341 | 413 | 198 | 15 | 1 | 399 | 1 | 391 | 1.32e-91 | 281 |
MsG0680034683.01.T01 | MTR_7g017170 | 41.943 | 422 | 194 | 11 | 9 | 404 | 12 | 408 | 4.02e-91 | 281 |
MsG0680034683.01.T01 | MTR_4g102410 | 42.579 | 411 | 207 | 13 | 7 | 403 | 53 | 448 | 6.09e-91 | 281 |
MsG0680034683.01.T01 | MTR_5g096630 | 42.446 | 417 | 204 | 11 | 9 | 404 | 12 | 413 | 1.61e-90 | 280 |
MsG0680034683.01.T01 | MTR_5g037680 | 42.752 | 407 | 187 | 11 | 10 | 399 | 3 | 380 | 5.46e-90 | 279 |
MsG0680034683.01.T01 | MTR_5g097680 | 42.032 | 433 | 205 | 12 | 5 | 404 | 7 | 426 | 6.18e-90 | 278 |
MsG0680034683.01.T01 | MTR_3g011120 | 43.117 | 385 | 188 | 8 | 8 | 389 | 7 | 363 | 1.13e-89 | 276 |
MsG0680034683.01.T01 | MTR_1g007450 | 43.603 | 383 | 203 | 5 | 7 | 386 | 4 | 376 | 1.17e-89 | 278 |
MsG0680034683.01.T01 | MTR_2g104260 | 55.986 | 284 | 112 | 5 | 1 | 278 | 1 | 277 | 8.12e-89 | 270 |
MsG0680034683.01.T01 | MTR_6g090180 | 42.118 | 406 | 214 | 9 | 3 | 397 | 35 | 430 | 4.48e-88 | 274 |
MsG0680034683.01.T01 | MTR_2g066170 | 39.259 | 405 | 216 | 10 | 7 | 404 | 4 | 385 | 1.17e-87 | 271 |
MsG0680034683.01.T01 | MTR_0831s0010 | 39.651 | 401 | 215 | 9 | 8 | 404 | 43 | 420 | 2.96e-87 | 271 |
MsG0680034683.01.T01 | MTR_4g028680 | 41.706 | 422 | 205 | 13 | 1 | 404 | 1 | 399 | 3.91e-87 | 270 |
MsG0680034683.01.T01 | MTR_5g097350 | 43.000 | 400 | 193 | 8 | 10 | 401 | 11 | 383 | 8.54e-87 | 269 |
MsG0680034683.01.T01 | MTR_5g059430 | 41.205 | 415 | 206 | 11 | 9 | 399 | 20 | 420 | 9.12e-86 | 268 |
MsG0680034683.01.T01 | MTR_8g467670 | 39.563 | 412 | 207 | 11 | 1 | 404 | 1 | 378 | 1.28e-85 | 266 |
MsG0680034683.01.T01 | MTR_6g080680 | 39.709 | 413 | 198 | 9 | 5 | 396 | 9 | 391 | 1.06e-84 | 264 |
MsG0680034683.01.T01 | MTR_6g079810 | 41.205 | 415 | 197 | 13 | 14 | 403 | 69 | 461 | 5.52e-84 | 264 |
MsG0680034683.01.T01 | MTR_6g461660 | 40.247 | 405 | 209 | 10 | 7 | 399 | 11 | 394 | 3.66e-83 | 260 |
MsG0680034683.01.T01 | MTR_7g017040 | 42.787 | 409 | 198 | 10 | 10 | 404 | 11 | 397 | 4.01e-83 | 260 |
MsG0680034683.01.T01 | MTR_2g066200 | 38.443 | 411 | 217 | 11 | 5 | 404 | 2 | 387 | 2.90e-82 | 257 |
MsG0680034683.01.T01 | MTR_5g097220 | 40.767 | 417 | 208 | 13 | 10 | 404 | 8 | 407 | 5.08e-82 | 257 |
MsG0680034683.01.T01 | MTR_4g014370 | 37.762 | 429 | 209 | 12 | 9 | 404 | 5 | 408 | 5.70e-82 | 257 |
MsG0680034683.01.T01 | MTR_1g007410 | 42.025 | 395 | 211 | 12 | 10 | 398 | 17 | 399 | 7.16e-82 | 257 |
MsG0680034683.01.T01 | MTR_5g022850 | 38.500 | 400 | 183 | 6 | 10 | 404 | 11 | 352 | 1.40e-81 | 254 |
MsG0680034683.01.T01 | MTR_4g028510 | 40.094 | 424 | 211 | 14 | 1 | 404 | 1 | 401 | 1.55e-81 | 258 |
MsG0680034683.01.T01 | MTR_2g065840 | 39.329 | 417 | 206 | 14 | 5 | 404 | 2 | 388 | 5.96e-81 | 254 |
MsG0680034683.01.T01 | MTR_4g028660 | 39.372 | 414 | 211 | 13 | 1 | 397 | 1 | 391 | 1.05e-80 | 254 |
MsG0680034683.01.T01 | MTR_4g027450 | 39.372 | 414 | 211 | 13 | 1 | 397 | 1 | 391 | 1.05e-80 | 254 |
MsG0680034683.01.T01 | MTR_2g034700 | 40.561 | 392 | 191 | 12 | 13 | 397 | 12 | 368 | 6.96e-80 | 251 |
MsG0680034683.01.T01 | MTR_2g065860 | 39.036 | 415 | 209 | 14 | 5 | 404 | 2 | 387 | 7.98e-80 | 251 |
MsG0680034683.01.T01 | MTR_5g069390 | 41.608 | 423 | 204 | 16 | 3 | 403 | 14 | 415 | 3.76e-78 | 250 |
MsG0680034683.01.T01 | MTR_4g130330 | 40.146 | 411 | 200 | 14 | 14 | 404 | 6 | 390 | 6.62e-78 | 246 |
MsG0680034683.01.T01 | MTR_8g064890 | 38.537 | 410 | 223 | 11 | 1 | 404 | 1 | 387 | 8.57e-78 | 246 |
MsG0680034683.01.T01 | MTR_8g033140 | 38.426 | 432 | 216 | 13 | 2 | 402 | 4 | 416 | 7.16e-77 | 244 |
MsG0680034683.01.T01 | MTR_7g111700 | 38.810 | 420 | 185 | 10 | 1 | 404 | 1 | 364 | 1.33e-76 | 242 |
MsG0680034683.01.T01 | MTR_8g039500 | 39.096 | 376 | 189 | 12 | 7 | 375 | 4 | 346 | 5.21e-75 | 237 |
MsG0680034683.01.T01 | MTR_8g046310 | 39.364 | 409 | 195 | 13 | 5 | 399 | 3 | 372 | 6.40e-74 | 235 |
MsG0680034683.01.T01 | MTR_5g091140 | 40.153 | 391 | 192 | 13 | 5 | 385 | 38 | 396 | 2.09e-73 | 235 |
MsG0680034683.01.T01 | MTR_6g478230 | 38.186 | 419 | 211 | 8 | 5 | 404 | 17 | 406 | 4.97e-73 | 234 |
MsG0680034683.01.T01 | MTR_4g028750 | 38.482 | 382 | 200 | 11 | 14 | 382 | 15 | 374 | 3.02e-72 | 232 |
MsG0680034683.01.T01 | MTR_2g066150 | 37.010 | 408 | 195 | 15 | 7 | 404 | 4 | 359 | 3.50e-71 | 228 |
MsG0680034683.01.T01 | MTR_8g032980 | 38.356 | 438 | 209 | 16 | 4 | 402 | 3 | 418 | 4.69e-71 | 229 |
MsG0680034683.01.T01 | MTR_1g007430 | 39.823 | 339 | 183 | 4 | 26 | 364 | 7 | 324 | 1.73e-70 | 225 |
MsG0680034683.01.T01 | MTR_5g074850 | 40.447 | 403 | 192 | 18 | 4 | 383 | 24 | 401 | 3.30e-70 | 238 |
MsG0680034683.01.T01 | MTR_5g024260 | 38.425 | 419 | 194 | 19 | 1 | 390 | 7 | 390 | 6.67e-70 | 226 |
MsG0680034683.01.T01 | MTR_5g064700 | 41.270 | 378 | 180 | 13 | 56 | 404 | 3 | 367 | 2.24e-69 | 223 |
MsG0680034683.01.T01 | MTR_5g092850 | 36.879 | 423 | 212 | 14 | 1 | 397 | 1 | 394 | 3.88e-69 | 224 |
MsG0680034683.01.T01 | MTR_1g053510 | 37.232 | 419 | 224 | 12 | 1 | 399 | 1 | 400 | 1.46e-68 | 223 |
MsG0680034683.01.T01 | MTR_8g046200 | 37.613 | 444 | 200 | 17 | 4 | 399 | 2 | 416 | 2.68e-68 | 222 |
MsG0680034683.01.T01 | MTR_8g046220 | 37.063 | 429 | 207 | 13 | 4 | 399 | 2 | 400 | 6.40e-68 | 221 |
MsG0680034683.01.T01 | MTR_4g007940 | 39.144 | 327 | 170 | 9 | 89 | 402 | 29 | 339 | 8.14e-68 | 219 |
MsG0680034683.01.T01 | MTR_5g096910 | 37.288 | 413 | 203 | 14 | 13 | 404 | 15 | 392 | 2.88e-67 | 219 |
MsG0680034683.01.T01 | MTR_6g090250 | 37.385 | 436 | 214 | 14 | 4 | 399 | 2 | 418 | 1.04e-66 | 218 |
MsG0680034683.01.T01 | MTR_7g016930 | 39.943 | 353 | 168 | 9 | 9 | 357 | 10 | 322 | 2.78e-66 | 214 |
MsG0680034683.01.T01 | MTR_8g033110 | 36.792 | 424 | 231 | 14 | 5 | 404 | 4 | 414 | 5.97e-66 | 216 |
MsG0680034683.01.T01 | MTR_8g063330 | 38.636 | 352 | 198 | 7 | 14 | 362 | 13 | 349 | 2.56e-64 | 213 |
MsG0680034683.01.T01 | MTR_5g075370 | 38.287 | 397 | 192 | 16 | 14 | 383 | 7 | 377 | 1.46e-63 | 218 |
MsG0680034683.01.T01 | MTR_1g098180 | 34.293 | 417 | 198 | 14 | 5 | 402 | 4 | 363 | 1.13e-62 | 206 |
MsG0680034683.01.T01 | MTR_8g033090 | 37.440 | 414 | 221 | 15 | 14 | 404 | 13 | 411 | 3.56e-61 | 203 |
MsG0680034683.01.T01 | MTR_5g092860 | 36.979 | 384 | 174 | 14 | 33 | 392 | 20 | 359 | 5.20e-61 | 202 |
MsG0680034683.01.T01 | MTR_8g018110 | 34.279 | 423 | 207 | 14 | 14 | 404 | 13 | 396 | 4.70e-60 | 200 |
MsG0680034683.01.T01 | MTR_8g064790 | 33.659 | 410 | 192 | 11 | 1 | 404 | 1 | 336 | 1.35e-59 | 197 |
MsG0680034683.01.T01 | MTR_6g078010 | 36.066 | 366 | 179 | 10 | 52 | 399 | 1 | 329 | 1.84e-58 | 194 |
MsG0680034683.01.T01 | MTR_5g076490 | 40.970 | 371 | 165 | 12 | 52 | 404 | 1 | 335 | 1.72e-57 | 192 |
MsG0680034683.01.T01 | MTR_8g036970 | 35.580 | 371 | 166 | 9 | 19 | 385 | 2 | 303 | 3.90e-57 | 192 |
MsG0680034683.01.T01 | MTR_8g063370 | 32.905 | 389 | 215 | 11 | 21 | 397 | 30 | 384 | 7.38e-57 | 192 |
MsG0680034683.01.T01 | MTR_2g021920 | 46.667 | 240 | 110 | 8 | 169 | 399 | 37 | 267 | 2.03e-56 | 187 |
MsG0680034683.01.T01 | MTR_8g063310 | 33.741 | 409 | 228 | 15 | 3 | 397 | 10 | 389 | 6.71e-56 | 189 |
MsG0680034683.01.T01 | MTR_6g004450 | 44.856 | 243 | 106 | 7 | 170 | 406 | 50 | 270 | 4.25e-54 | 181 |
MsG0680034683.01.T01 | MTR_5g097820 | 39.643 | 280 | 138 | 9 | 2 | 270 | 10 | 269 | 2.16e-53 | 179 |
MsG0680034683.01.T01 | MTR_6g079790 | 36.250 | 320 | 176 | 7 | 100 | 404 | 2 | 308 | 2.42e-53 | 180 |
MsG0680034683.01.T01 | MTR_5g096900 | 37.243 | 341 | 161 | 13 | 10 | 330 | 7 | 314 | 6.00e-52 | 177 |
MsG0680034683.01.T01 | MTR_1g050312 | 38.095 | 315 | 145 | 10 | 89 | 397 | 17 | 287 | 6.64e-51 | 173 |
MsG0680034683.01.T01 | MTR_5g086590 | 42.802 | 257 | 120 | 8 | 133 | 389 | 10 | 239 | 1.09e-50 | 171 |
MsG0680034683.01.T01 | MTR_5g037190 | 37.276 | 279 | 139 | 6 | 1 | 272 | 1 | 250 | 4.58e-50 | 169 |
MsG0680034683.01.T01 | MTR_6g087620 | 36.025 | 322 | 147 | 9 | 89 | 395 | 2 | 279 | 4.60e-50 | 171 |
MsG0680034683.01.T01 | MTR_5g043605 | 35.535 | 318 | 169 | 10 | 94 | 404 | 50 | 338 | 5.98e-49 | 170 |
MsG0680034683.01.T01 | MTR_7g023800 | 34.454 | 357 | 163 | 10 | 55 | 396 | 2 | 302 | 3.64e-48 | 166 |
MsG0680034683.01.T01 | MTR_5g068490 | 34.951 | 309 | 160 | 10 | 97 | 404 | 8 | 276 | 4.98e-48 | 165 |
MsG0680034683.01.T01 | MTR_5g023970 | 48.205 | 195 | 94 | 3 | 212 | 404 | 6 | 195 | 4.54e-47 | 160 |
MsG0680034683.01.T01 | MTR_8g033000 | 36.316 | 380 | 197 | 16 | 52 | 404 | 1 | 362 | 4.60e-47 | 165 |
MsG0680034683.01.T01 | MTR_7g104710 | 36.036 | 333 | 141 | 11 | 6 | 321 | 8 | 285 | 5.08e-47 | 164 |
MsG0680034683.01.T01 | MTR_6g070880 | 40.084 | 237 | 125 | 6 | 10 | 235 | 27 | 257 | 9.32e-47 | 161 |
MsG0680034683.01.T01 | MTR_6g071420 | 40.084 | 237 | 125 | 6 | 10 | 235 | 27 | 257 | 9.32e-47 | 161 |
MsG0680034683.01.T01 | MTR_6g465360 | 43.103 | 232 | 106 | 9 | 6 | 219 | 53 | 276 | 2.81e-46 | 161 |
MsG0680034683.01.T01 | MTR_5g098950 | 42.291 | 227 | 89 | 5 | 138 | 364 | 90 | 274 | 3.37e-45 | 157 |
MsG0680034683.01.T01 | MTR_5g094350 | 36.934 | 287 | 146 | 7 | 11 | 284 | 9 | 273 | 5.00e-45 | 157 |
MsG0680034683.01.T01 | MTR_8g063350 | 30.597 | 402 | 185 | 14 | 15 | 398 | 14 | 339 | 1.92e-43 | 155 |
MsG0680034683.01.T01 | MTR_4g016000 | 40.553 | 217 | 98 | 6 | 141 | 355 | 2 | 189 | 4.06e-43 | 150 |
MsG0680034683.01.T01 | MTR_1g076810 | 39.831 | 236 | 121 | 6 | 5 | 235 | 8 | 227 | 1.75e-41 | 155 |
MsG0680034683.01.T01 | MTR_8g073570 | 47.953 | 171 | 80 | 6 | 12 | 180 | 7 | 170 | 3.27e-39 | 138 |
MsG0680034683.01.T01 | MTR_6g009350 | 40.777 | 206 | 97 | 7 | 170 | 369 | 9 | 195 | 5.27e-39 | 139 |
MsG0680034683.01.T01 | MTR_6g090260 | 44.444 | 189 | 96 | 3 | 214 | 397 | 72 | 256 | 7.00e-39 | 140 |
MsG0680034683.01.T01 | MTR_6g090260 | 64.706 | 51 | 18 | 0 | 14 | 64 | 19 | 69 | 5.27e-14 | 72.0 |
MsG0680034683.01.T01 | MTR_3g018750 | 38.866 | 247 | 123 | 8 | 168 | 399 | 2 | 235 | 9.82e-39 | 139 |
MsG0680034683.01.T01 | MTR_7g019250 | 38.235 | 238 | 115 | 7 | 149 | 383 | 205 | 413 | 2.68e-38 | 144 |
MsG0680034683.01.T01 | MTR_1g115205 | 37.956 | 274 | 102 | 8 | 15 | 273 | 29 | 249 | 6.48e-37 | 135 |
MsG0680034683.01.T01 | MTR_5g097850 | 46.809 | 188 | 93 | 4 | 222 | 406 | 63 | 246 | 1.00e-36 | 134 |
MsG0680034683.01.T01 | MTR_3g030620 | 45.963 | 161 | 83 | 4 | 246 | 403 | 21 | 180 | 1.61e-35 | 129 |
MsG0680034683.01.T01 | MTR_4g014370 | 38.863 | 211 | 108 | 6 | 200 | 404 | 141 | 336 | 1.71e-35 | 134 |
MsG0680034683.01.T01 | MTR_4g014370 | 42.857 | 126 | 69 | 2 | 9 | 132 | 16 | 140 | 1.22e-23 | 101 |
MsG0680034683.01.T01 | MTR_1g050308 | 35.745 | 235 | 126 | 7 | 7 | 237 | 26 | 239 | 2.34e-35 | 133 |
MsG0680034683.01.T01 | MTR_1g050308 | 41.401 | 157 | 75 | 5 | 257 | 404 | 198 | 346 | 2.22e-19 | 89.0 |
MsG0680034683.01.T01 | MTR_8g035690 | 35.907 | 259 | 131 | 9 | 169 | 405 | 58 | 303 | 4.50e-34 | 129 |
MsG0680034683.01.T01 | MTR_7g017120 | 40.724 | 221 | 117 | 6 | 188 | 404 | 55 | 265 | 6.96e-32 | 122 |
MsG0680034683.01.T01 | MTR_7g017150 | 41.500 | 200 | 106 | 5 | 209 | 404 | 74 | 266 | 2.09e-30 | 118 |
MsG0680034683.01.T01 | MTR_6g079730 | 52.991 | 117 | 51 | 1 | 266 | 382 | 14 | 126 | 2.39e-29 | 111 |
MsG0680034683.01.T01 | MTR_5g097650 | 40.252 | 159 | 84 | 2 | 1 | 159 | 8 | 155 | 9.90e-29 | 110 |
MsG0680034683.01.T01 | MTR_5g066420 | 43.624 | 149 | 69 | 3 | 248 | 388 | 1 | 142 | 6.23e-28 | 108 |
MsG0680034683.01.T01 | MTR_2g022020 | 52.885 | 104 | 48 | 1 | 298 | 401 | 14 | 116 | 7.30e-27 | 103 |
MsG0680034683.01.T01 | MTR_7g101200 | 35.146 | 239 | 94 | 10 | 137 | 363 | 39 | 228 | 2.24e-26 | 106 |
MsG0680034683.01.T01 | MTR_5g036250 | 54.167 | 96 | 44 | 0 | 302 | 397 | 8 | 103 | 8.28e-26 | 103 |
MsG0680034683.01.T01 | MTR_1g047080 | 28.415 | 366 | 170 | 17 | 52 | 407 | 1 | 284 | 3.45e-25 | 104 |
MsG0680034683.01.T01 | MTR_3g019290 | 33.188 | 229 | 96 | 7 | 1 | 223 | 1 | 178 | 4.97e-25 | 101 |
MsG0680034683.01.T01 | MTR_5g096920 | 41.139 | 158 | 83 | 5 | 248 | 403 | 1 | 150 | 1.11e-24 | 99.4 |
MsG0680034683.01.T01 | MTR_5g091150 | 32.766 | 235 | 84 | 9 | 100 | 312 | 2 | 184 | 2.97e-23 | 97.1 |
MsG0680034683.01.T01 | MTR_5g097540 | 40.940 | 149 | 75 | 4 | 217 | 364 | 97 | 233 | 4.36e-23 | 99.0 |
MsG0680034683.01.T01 | MTR_5g096070 | 36.782 | 174 | 71 | 7 | 9 | 177 | 20 | 159 | 7.89e-22 | 91.7 |
MsG0680034683.01.T01 | MTR_5g086780 | 46.364 | 110 | 55 | 2 | 273 | 382 | 123 | 228 | 7.29e-20 | 88.2 |
MsG0680034683.01.T01 | MTR_5g086780 | 61.818 | 55 | 19 | 1 | 7 | 59 | 8 | 62 | 2.88e-12 | 66.2 |
MsG0680034683.01.T01 | MTR_4g116330 | 24.279 | 416 | 239 | 17 | 8 | 403 | 16 | 375 | 1.32e-19 | 90.1 |
MsG0680034683.01.T01 | MTR_8g041440 | 43.636 | 110 | 36 | 2 | 10 | 112 | 10 | 100 | 1.64e-19 | 84.0 |
MsG0680034683.01.T01 | MTR_5g096050 | 45.794 | 107 | 43 | 3 | 249 | 344 | 2 | 104 | 3.68e-19 | 83.2 |
MsG0680034683.01.T01 | MTR_1g055135 | 25.137 | 366 | 227 | 13 | 14 | 372 | 12 | 337 | 8.35e-19 | 87.8 |
MsG0680034683.01.T01 | MTR_5g097660 | 49.038 | 104 | 51 | 2 | 298 | 399 | 11 | 114 | 1.18e-18 | 81.6 |
MsG0680034683.01.T01 | MTR_1g050305 | 51.020 | 98 | 42 | 3 | 307 | 399 | 21 | 117 | 1.70e-17 | 79.3 |
MsG0680034683.01.T01 | MTR_2g024110 | 23.951 | 405 | 248 | 16 | 15 | 405 | 4 | 362 | 2.01e-17 | 83.6 |
MsG0680034683.01.T01 | MTR_1g068835 | 22.716 | 405 | 247 | 17 | 15 | 406 | 4 | 355 | 2.50e-17 | 83.6 |
MsG0680034683.01.T01 | MTR_2g021150 | 25.185 | 405 | 228 | 17 | 15 | 397 | 14 | 365 | 4.15e-17 | 82.8 |
MsG0680034683.01.T01 | MTR_3g007360 | 26.426 | 333 | 189 | 15 | 18 | 342 | 55 | 339 | 4.28e-17 | 82.8 |
MsG0680034683.01.T01 | MTR_3g009310 | 22.563 | 359 | 225 | 10 | 15 | 369 | 42 | 351 | 8.72e-17 | 82.0 |
MsG0680034683.01.T01 | MTR_4g023080 | 24.570 | 407 | 245 | 14 | 8 | 407 | 2 | 353 | 9.36e-17 | 81.3 |
MsG0680034683.01.T01 | MTR_3g007410 | 26.239 | 343 | 177 | 16 | 18 | 342 | 55 | 339 | 1.08e-16 | 81.6 |
MsG0680034683.01.T01 | MTR_3g014540 | 24.590 | 366 | 220 | 14 | 15 | 373 | 29 | 345 | 2.10e-16 | 80.5 |
MsG0680034683.01.T01 | MTR_3g034180 | 24.432 | 352 | 200 | 12 | 8 | 341 | 116 | 419 | 4.13e-16 | 80.5 |
MsG0680034683.01.T01 | MTR_4g133170 | 24.041 | 391 | 222 | 16 | 15 | 385 | 4 | 339 | 6.59e-16 | 79.3 |
MsG0680034683.01.T01 | MTR_3g013740 | 24.713 | 348 | 202 | 12 | 10 | 341 | 39 | 342 | 7.73e-16 | 79.3 |
MsG0680034683.01.T01 | MTR_3g034130 | 23.316 | 386 | 227 | 14 | 8 | 372 | 2 | 339 | 1.41e-15 | 78.2 |
MsG0680034683.01.T01 | MTR_6g048120 | 26.415 | 371 | 212 | 17 | 15 | 371 | 36 | 359 | 2.92e-15 | 77.4 |
MsG0680034683.01.T01 | MTR_1g037540 | 25.385 | 390 | 223 | 13 | 18 | 371 | 8 | 365 | 3.91e-15 | 77.0 |
MsG0680034683.01.T01 | MTR_3g006670 | 22.739 | 387 | 241 | 14 | 15 | 394 | 49 | 384 | 5.63e-15 | 76.6 |
MsG0680034683.01.T01 | MTR_4g094400 | 39.669 | 121 | 51 | 4 | 248 | 350 | 10 | 126 | 6.04e-15 | 71.6 |
MsG0680034683.01.T01 | MTR_3g083010 | 25.698 | 358 | 193 | 16 | 15 | 341 | 6 | 321 | 6.42e-15 | 76.3 |
MsG0680034683.01.T01 | MTR_4g023070 | 23.188 | 414 | 250 | 17 | 15 | 407 | 3 | 369 | 7.28e-15 | 75.9 |
MsG0680034683.01.T01 | MTR_4g021785 | 22.619 | 420 | 230 | 16 | 8 | 403 | 2 | 350 | 8.19e-15 | 75.5 |
MsG0680034683.01.T01 | MTR_1g097560 | 24.147 | 381 | 220 | 18 | 14 | 383 | 35 | 357 | 8.35e-15 | 75.9 |
MsG0680034683.01.T01 | MTR_3g007270 | 23.967 | 363 | 227 | 11 | 15 | 369 | 47 | 368 | 1.05e-14 | 75.9 |
MsG0680034683.01.T01 | MTR_5g097210 | 23.250 | 400 | 252 | 14 | 8 | 399 | 2 | 354 | 1.27e-14 | 75.1 |
MsG0680034683.01.T01 | MTR_3g047580 | 32.886 | 149 | 56 | 3 | 13 | 150 | 12 | 127 | 1.33e-14 | 70.5 |
MsG0680034683.01.T01 | MTR_4g094365 | 25.444 | 338 | 192 | 13 | 14 | 341 | 7 | 294 | 1.85e-14 | 74.7 |
MsG0680034683.01.T01 | MTR_4g117850 | 25.373 | 335 | 195 | 12 | 14 | 341 | 22 | 308 | 2.42e-14 | 74.3 |
MsG0680034683.01.T01 | MTR_4g116330 | 23.002 | 413 | 209 | 18 | 8 | 403 | 16 | 336 | 2.49e-14 | 73.9 |
MsG0680034683.01.T01 | MTR_2g025420 | 22.695 | 423 | 260 | 16 | 15 | 406 | 6 | 392 | 3.84e-14 | 73.9 |
MsG0680034683.01.T01 | MTR_5g048160 | 22.651 | 415 | 257 | 16 | 14 | 397 | 3 | 384 | 4.01e-14 | 73.9 |
MsG0680034683.01.T01 | MTR_2g028140 | 24.419 | 344 | 218 | 13 | 14 | 341 | 4 | 321 | 5.06e-14 | 73.6 |
MsG0680034683.01.T01 | MTR_0115s0020 | 23.513 | 353 | 214 | 14 | 14 | 344 | 9 | 327 | 5.65e-14 | 73.6 |
MsG0680034683.01.T01 | MTR_1g009110 | 24.611 | 386 | 222 | 17 | 6 | 370 | 5 | 342 | 6.07e-14 | 73.2 |
MsG0680034683.01.T01 | MTR_2g021190 | 25.369 | 339 | 208 | 13 | 15 | 350 | 21 | 317 | 1.03e-13 | 72.4 |
MsG0680034683.01.T01 | MTR_0667s0010 | 22.892 | 415 | 255 | 16 | 13 | 405 | 4 | 375 | 1.05e-13 | 72.8 |
MsG0680034683.01.T01 | MTR_3g014570 | 25.444 | 338 | 192 | 13 | 15 | 342 | 29 | 316 | 1.20e-13 | 72.4 |
MsG0680034683.01.T01 | MTR_5g070088 | 25.000 | 348 | 212 | 10 | 10 | 342 | 2 | 315 | 1.65e-13 | 72.0 |
MsG0680034683.01.T01 | MTR_3g007430 | 25.063 | 395 | 216 | 20 | 18 | 387 | 46 | 385 | 2.01e-13 | 71.6 |
MsG0680034683.01.T01 | MTR_5g070080 | 24.786 | 351 | 197 | 13 | 14 | 341 | 9 | 315 | 3.27e-13 | 70.9 |
MsG0680034683.01.T01 | MTR_4g030830 | 22.512 | 422 | 248 | 16 | 15 | 397 | 9 | 390 | 3.86e-13 | 70.9 |
MsG0680034683.01.T01 | MTR_3g103020 | 24.173 | 393 | 225 | 17 | 1 | 372 | 1 | 341 | 5.17e-13 | 70.5 |
MsG0680034683.01.T01 | MTR_4g117780 | 22.081 | 394 | 260 | 12 | 15 | 403 | 11 | 362 | 7.70e-13 | 69.7 |
MsG0680034683.01.T01 | MTR_4g023150 | 25.269 | 372 | 215 | 13 | 8 | 369 | 3 | 321 | 8.17e-13 | 69.7 |
MsG0680034683.01.T01 | MTR_4g061340 | 24.189 | 339 | 198 | 16 | 15 | 342 | 26 | 316 | 9.59e-13 | 69.7 |
MsG0680034683.01.T01 | MTR_5g094360 | 40.217 | 92 | 45 | 4 | 146 | 235 | 40 | 123 | 1.26e-12 | 65.9 |
MsG0680034683.01.T01 | MTR_2g028130 | 24.747 | 396 | 243 | 17 | 15 | 385 | 5 | 370 | 1.57e-12 | 68.9 |
MsG0680034683.01.T01 | MTR_2g031720 | 22.651 | 415 | 239 | 15 | 15 | 405 | 6 | 362 | 1.99e-12 | 68.6 |
MsG0680034683.01.T01 | MTR_4g109270 | 23.981 | 417 | 224 | 15 | 15 | 403 | 8 | 359 | 2.06e-12 | 68.6 |
MsG0680034683.01.T01 | MTR_4g109280 | 25.613 | 367 | 214 | 13 | 13 | 372 | 6 | 320 | 3.22e-12 | 67.8 |
MsG0680034683.01.T01 | MTR_8g433040 | 23.188 | 414 | 243 | 12 | 4 | 403 | 7 | 359 | 7.96e-12 | 66.6 |
MsG0680034683.01.T01 | MTR_8g032380 | 23.188 | 414 | 243 | 12 | 4 | 403 | 7 | 359 | 7.96e-12 | 66.6 |
MsG0680034683.01.T01 | MTR_3g013770 | 21.930 | 342 | 211 | 10 | 15 | 346 | 33 | 328 | 1.20e-11 | 66.2 |
MsG0680034683.01.T01 | MTR_2g028110 | 25.253 | 396 | 213 | 23 | 15 | 385 | 4 | 341 | 1.65e-11 | 65.9 |
MsG0680034683.01.T01 | MTR_2g047832 | 24.561 | 342 | 224 | 13 | 15 | 351 | 29 | 341 | 1.88e-11 | 65.9 |
MsG0680034683.01.T01 | MTR_4g070550 | 25.275 | 364 | 197 | 21 | 14 | 350 | 4 | 319 | 2.09e-11 | 65.5 |
MsG0680034683.01.T01 | MTR_4g023190 | 23.706 | 367 | 226 | 10 | 8 | 369 | 3 | 320 | 2.75e-11 | 65.1 |
MsG0680034683.01.T01 | MTR_7g407070 | 24.561 | 342 | 207 | 15 | 15 | 341 | 32 | 337 | 2.89e-11 | 65.1 |
MsG0680034683.01.T01 | MTR_7g013590 | 25.526 | 333 | 192 | 16 | 18 | 341 | 39 | 324 | 4.45e-11 | 64.7 |
MsG0680034683.01.T01 | MTR_7g070440 | 24.412 | 340 | 205 | 13 | 12 | 339 | 4 | 303 | 4.57e-11 | 64.3 |
MsG0680034683.01.T01 | MTR_4g055060 | 21.676 | 346 | 208 | 13 | 15 | 346 | 30 | 326 | 5.28e-11 | 64.3 |
MsG0680034683.01.T01 | MTR_6g087660 | 53.968 | 63 | 27 | 1 | 14 | 74 | 17 | 79 | 5.65e-11 | 62.0 |
MsG0680034683.01.T01 | MTR_3g024110 | 23.020 | 404 | 242 | 15 | 15 | 406 | 101 | 447 | 7.47e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680034683.01.T01 | AT3G06240 | 22.196 | 419 | 252 | 15 | 15 | 397 | 36 | 416 | 1.61e-16 | 81.3 |
MsG0680034683.01.T01 | AT3G17490 | 24.000 | 375 | 226 | 12 | 14 | 378 | 5 | 330 | 2.99e-14 | 74.3 |
MsG0680034683.01.T01 | AT3G22650 | 22.442 | 303 | 188 | 8 | 12 | 308 | 6 | 267 | 3.05e-13 | 71.2 |
MsG0680034683.01.T01 | AT4G12560 | 22.843 | 394 | 235 | 15 | 15 | 384 | 4 | 352 | 4.05e-13 | 70.9 |
MsG0680034683.01.T01 | AT4G12560 | 22.843 | 394 | 235 | 15 | 15 | 384 | 4 | 352 | 4.05e-13 | 70.9 |
MsG0680034683.01.T01 | AT4G12560 | 22.843 | 394 | 235 | 15 | 15 | 384 | 4 | 352 | 4.05e-13 | 70.9 |
MsG0680034683.01.T01 | AT3G16210 | 23.224 | 366 | 203 | 19 | 15 | 371 | 5 | 301 | 6.39e-12 | 67.0 |
MsG0680034683.01.T01 | AT3G49450 | 22.145 | 289 | 169 | 11 | 2 | 280 | 29 | 271 | 2.28e-11 | 65.5 |
MsG0680034683.01.T01 | AT3G22940 | 25.101 | 247 | 153 | 7 | 23 | 267 | 6 | 222 | 4.69e-11 | 64.7 |
Find 82 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAATTGTTCTCCTTAAAA+AGG | 0.167947 | 6:-92795512 | MsG0680034683.01.T01:CDS |
GGAGCTTCAAATGATGTTTA+TGG | 0.172642 | 6:-92795397 | MsG0680034683.01.T01:CDS |
TCTTAAAGTCGTCTTTAATA+TGG | 0.234339 | 6:+92795362 | None:intergenic |
AAGACGACTTTAAGATTATT+AGG | 0.249848 | 6:-92795354 | MsG0680034683.01.T01:CDS |
TTAAAATCTTTGAAACGATT+TGG | 0.251224 | 6:-92795799 | MsG0680034683.01.T01:CDS |
AGACGTTTAGTGGTGTTAAA+TGG | 0.274988 | 6:-92794986 | MsG0680034683.01.T01:CDS |
AATATGCCTTGTTGGAATTC+TGG | 0.276485 | 6:-92795187 | MsG0680034683.01.T01:CDS |
ATAGCCTAAGGTGTAATTCT+TGG | 0.299363 | 6:-92795225 | MsG0680034683.01.T01:CDS |
CTCGGTCTGTACCACCTTAT+CGG | 0.299997 | 6:-92795420 | MsG0680034683.01.T01:CDS |
ATCTTTCACCGGATAGTAAA+TGG | 0.301861 | 6:+92795620 | None:intergenic |
TCAAATGATGTTTATGGGTT+TGG | 0.306064 | 6:-92795391 | MsG0680034683.01.T01:CDS |
TGGTACAGACCGAGCGGGGC+TGG | 0.320163 | 6:+92795429 | None:intergenic |
GCCTTGAACTCATGTGTAGC+TGG | 0.357770 | 6:+92795460 | None:intergenic |
GAGCTTCAAATGATGTTTAT+GGG | 0.359835 | 6:-92795396 | MsG0680034683.01.T01:CDS |
TTGATATGAATATGCCTTGT+TGG | 0.362895 | 6:-92795195 | MsG0680034683.01.T01:CDS |
AATTGTTCAAAGACGTTTAG+TGG | 0.367058 | 6:-92794996 | MsG0680034683.01.T01:CDS |
AAGGAAAGCCGTCTCTTCAT+TGG | 0.379025 | 6:-92794701 | MsG0680034683.01.T01:CDS |
ATAGAAAACACAAGATCATT+AGG | 0.387042 | 6:+92795838 | None:intergenic |
TAGGCTATAAATCTCCCATA+TGG | 0.387562 | 6:+92795240 | None:intergenic |
TGGACTAAACTCTTTGTTGT+TGG | 0.407257 | 6:-92794881 | MsG0680034683.01.T01:CDS |
CCGAGCGGGGCTGGGAGGTA+TGG | 0.411355 | 6:+92795438 | None:intergenic |
AAATATCCTATGCACCCATA+TGG | 0.413062 | 6:-92795255 | MsG0680034683.01.T01:CDS |
CTTGATGTTAAGCGTTGTAT+TGG | 0.413152 | 6:-92794851 | MsG0680034683.01.T01:CDS |
TCGGTCTGTACCACCTTATC+GGG | 0.423824 | 6:-92795419 | MsG0680034683.01.T01:CDS |
GGTACAGACCGAGCGGGGCT+GGG | 0.424485 | 6:+92795430 | None:intergenic |
ACTAAAGAACTTGGTGTTGA+AGG | 0.427982 | 6:-92794752 | MsG0680034683.01.T01:CDS |
GACTCTTACCATTTACTATC+CGG | 0.429156 | 6:-92795628 | MsG0680034683.01.T01:CDS |
GAAGGTATGTCTAAAGGTAT+AGG | 0.432523 | 6:+92795046 | None:intergenic |
TATGGTCCATTGTGCTTCAA+TGG | 0.445858 | 6:-92795157 | MsG0680034683.01.T01:CDS |
TACGTGAATGATCACAATAA+AGG | 0.449932 | 6:+92795665 | None:intergenic |
TTGATTGAAGGTATGTCTAA+AGG | 0.458601 | 6:+92795040 | None:intergenic |
TTATGAAATTTCAATTTACA+AGG | 0.464327 | 6:-92794720 | MsG0680034683.01.T01:CDS |
ACGCTGGTATCTTTGATTGA+AGG | 0.469283 | 6:+92795028 | None:intergenic |
TGGAATTCTGGTGCACCATA+TGG | 0.472994 | 6:-92795175 | MsG0680034683.01.T01:CDS |
TTGAAGCACAATGGACCATA+TGG | 0.477590 | 6:+92795160 | None:intergenic |
CCCAGCTACACATGAGTTCA+AGG | 0.479425 | 6:-92795461 | MsG0680034683.01.T01:CDS |
TCATTTGAAGCTCCCCGATA+AGG | 0.479618 | 6:+92795406 | None:intergenic |
CTGGAAGTAAAAGAAAGGTT+AGG | 0.492032 | 6:-92795870 | MsG0680034683.01.T01:CDS |
GCTTCAATGGAATATGTCAT+TGG | 0.499887 | 6:-92795144 | MsG0680034683.01.T01:CDS |
AAATTGTGATGAATATTTGT+TGG | 0.511297 | 6:-92795107 | MsG0680034683.01.T01:CDS |
AATATCCTATGCACCCATAT+GGG | 0.514569 | 6:-92795254 | MsG0680034683.01.T01:CDS |
AACTTGGCGTAAAAGAATCA+TGG | 0.515322 | 6:-92794901 | MsG0680034683.01.T01:CDS |
TGTATTGGAGCGGCGAAGAA+TGG | 0.515477 | 6:-92794836 | MsG0680034683.01.T01:CDS |
TTCTCCAAGAATTACACCTT+AGG | 0.528375 | 6:+92795221 | None:intergenic |
AGGCTATAAATCTCCCATAT+GGG | 0.533527 | 6:+92795241 | None:intergenic |
CCATACCTCCCAGCCCCGCT+CGG | 0.537440 | 6:-92795438 | MsG0680034683.01.T01:CDS |
AAAGGATGATAGATGTATCA+TGG | 0.538579 | 6:+92795683 | None:intergenic |
GATCCATTGCTTCGATCTCA+TGG | 0.539716 | 6:-92794964 | MsG0680034683.01.T01:CDS |
TATGGGAGATTTATAGCCTA+AGG | 0.539904 | 6:-92795237 | MsG0680034683.01.T01:CDS |
GAAAGCCGTCTCTTCATTGG+AGG | 0.547175 | 6:-92794698 | MsG0680034683.01.T01:CDS |
AACAATTATCATACGAACGC+TGG | 0.550614 | 6:+92795012 | None:intergenic |
AATCTCCCATATGGGTGCAT+AGG | 0.550944 | 6:+92795249 | None:intergenic |
CCTTGAACTCATGTGTAGCT+GGG | 0.558221 | 6:+92795461 | None:intergenic |
ATGCCATGAGATCGAAGCAA+TGG | 0.560777 | 6:+92794961 | None:intergenic |
ATCTCCAAATCCATTTCAAG+AGG | 0.569179 | 6:-92795575 | MsG0680034683.01.T01:CDS |
GGCAAGGCACACTTGTGTTG+TGG | 0.573112 | 6:-92795486 | MsG0680034683.01.T01:CDS |
CAATGGAATATGTCATTGGT+GGG | 0.578235 | 6:-92795140 | MsG0680034683.01.T01:CDS |
ATAGATGTATCATGGTAGCA+AGG | 0.578577 | 6:+92795691 | None:intergenic |
TAAGGTGGTACAGACCGAGC+GGG | 0.578843 | 6:+92795424 | None:intergenic |
GCATAGGATATTTCATCCCA+TGG | 0.580299 | 6:+92795265 | None:intergenic |
AAATTCTGGAAGTAAAAGAA+AGG | 0.582624 | 6:-92795875 | MsG0680034683.01.T01:CDS |
TCGGCTTCTCAATGTGCGGA+AGG | 0.587355 | 6:-92795296 | MsG0680034683.01.T01:CDS |
ACTGAGAAGACTAAAGAACT+TGG | 0.590941 | 6:-92794761 | MsG0680034683.01.T01:CDS |
GTATCATGGTAGCAAGGGTG+AGG | 0.600652 | 6:+92795697 | None:intergenic |
ACAGACCGAGCGGGGCTGGG+AGG | 0.601284 | 6:+92795433 | None:intergenic |
TCAATGGAATATGTCATTGG+TGG | 0.603794 | 6:-92795141 | MsG0680034683.01.T01:CDS |
TTGGATGCGTAAACAAAGCA+TGG | 0.611689 | 6:-92795780 | MsG0680034683.01.T01:CDS |
TGCGGAAGGAAGATGTGCCA+TGG | 0.614996 | 6:-92795282 | MsG0680034683.01.T01:CDS |
GATTAGATAGAAAATTATTG+CGG | 0.615287 | 6:+92795719 | None:intergenic |
CATATTCCATTGAAGCACAA+TGG | 0.616048 | 6:+92795151 | None:intergenic |
TAGATGTATCATGGTAGCAA+GGG | 0.623277 | 6:+92795692 | None:intergenic |
ATATTCCTCCAATGAAGAGA+CGG | 0.629077 | 6:+92794693 | None:intergenic |
TTTGAAGCTCCCCGATAAGG+TGG | 0.630341 | 6:+92795409 | None:intergenic |
AACTTCGGCTTCTCAATGTG+CGG | 0.631019 | 6:-92795300 | MsG0680034683.01.T01:CDS |
TGTTAAGCGTTGTATTGGAG+CGG | 0.650411 | 6:-92794846 | MsG0680034683.01.T01:CDS |
GAATAAGCGAGTCAAAACTT+CGG | 0.655769 | 6:-92795315 | MsG0680034683.01.T01:CDS |
GCGGAAGGAAGATGTGCCAT+GGG | 0.675787 | 6:-92795281 | MsG0680034683.01.T01:CDS |
CAACGCTTAACATCAAGCAA+TGG | 0.679359 | 6:+92794857 | None:intergenic |
CGGTCTGTACCACCTTATCG+GGG | 0.691489 | 6:-92795418 | MsG0680034683.01.T01:CDS |
AAGGTGGTACAGACCGAGCG+GGG | 0.694498 | 6:+92795425 | None:intergenic |
ATAAGGTGGTACAGACCGAG+CGG | 0.734669 | 6:+92795423 | None:intergenic |
GGTGCACCAGAATTCCAACA+AGG | 0.744604 | 6:+92795181 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTCTTTCAAAAAAAAGA+TGG | - | Chr6:92795756-92795775 | MsG0680034683.01.T01:CDS | 15.0% |
!! | TTATGAAATTTCAATTTACA+AGG | - | Chr6:92795845-92795864 | MsG0680034683.01.T01:CDS | 15.0% |
!! | AAATTGTGATGAATATTTGT+TGG | - | Chr6:92795458-92795477 | MsG0680034683.01.T01:CDS | 20.0% |
!! | GATTAGATAGAAAATTATTG+CGG | + | Chr6:92794849-92794868 | None:intergenic | 20.0% |
!!! | AATCGTTTCAAAGATTTTAA+AGG | + | Chr6:92794766-92794785 | None:intergenic | 20.0% |
!!! | ATTTTAAAGGAAGTTTTGAA+AGG | + | Chr6:92794753-92794772 | None:intergenic | 20.0% |
!!! | TTAAAATCTTTGAAACGATT+TGG | - | Chr6:92794766-92794785 | MsG0680034683.01.T01:CDS | 20.0% |
! | ATAGAAAACACAAGATCATT+AGG | + | Chr6:92794730-92794749 | None:intergenic | 25.0% |
! | TCTTAAAGTCGTCTTTAATA+TGG | + | Chr6:92795206-92795225 | None:intergenic | 25.0% |
!! | AAATTCTGGAAGTAAAAGAA+AGG | - | Chr6:92794690-92794709 | MsG0680034683.01.T01:CDS | 25.0% |
!! | ACTTTTCACATCTCAATTTT+GGG | - | Chr6:92795639-92795658 | MsG0680034683.01.T01:CDS | 25.0% |
!! | TACTTTTCACATCTCAATTT+TGG | - | Chr6:92795638-92795657 | MsG0680034683.01.T01:CDS | 25.0% |
!!! | AAGACGACTTTAAGATTATT+AGG | - | Chr6:92795211-92795230 | MsG0680034683.01.T01:CDS | 25.0% |
AAAGGATGATAGATGTATCA+TGG | + | Chr6:92794885-92794904 | None:intergenic | 30.0% | |
AATTGTTCAAAGACGTTTAG+TGG | - | Chr6:92795569-92795588 | MsG0680034683.01.T01:CDS | 30.0% | |
AGCCTAAAAAATTGAAGACA+GGG | + | Chr6:92795020-92795039 | None:intergenic | 30.0% | |
GAGCTTCAAATGATGTTTAT+GGG | - | Chr6:92795169-92795188 | MsG0680034683.01.T01:CDS | 30.0% | |
GGAATTGTTCTCCTTAAAAA+GGG | - | Chr6:92795054-92795073 | MsG0680034683.01.T01:CDS | 30.0% | |
TACGTGAATGATCACAATAA+AGG | + | Chr6:92794903-92794922 | None:intergenic | 30.0% | |
TCAAATGATGTTTATGGGTT+TGG | - | Chr6:92795174-92795193 | MsG0680034683.01.T01:CDS | 30.0% | |
TGGAATTGTTCTCCTTAAAA+AGG | - | Chr6:92795053-92795072 | MsG0680034683.01.T01:CDS | 30.0% | |
TTGATATGAATATGCCTTGT+TGG | - | Chr6:92795370-92795389 | MsG0680034683.01.T01:CDS | 30.0% | |
! | TCGATTTTCATATCTTTCAC+CGG | + | Chr6:92794959-92794978 | None:intergenic | 30.0% |
! | TTGATTGAAGGTATGTCTAA+AGG | + | Chr6:92795528-92795547 | None:intergenic | 30.0% |
!! | TTTTCCTCTTGAAATGGATT+TGG | + | Chr6:92794997-92795016 | None:intergenic | 30.0% |
!!! | AACCCTGTCTTCAATTTTTT+AGG | - | Chr6:92795015-92795034 | MsG0680034683.01.T01:CDS | 30.0% |
AAATATCCTATGCACCCATA+TGG | - | Chr6:92795310-92795329 | MsG0680034683.01.T01:CDS | 35.0% | |
AACAATTATCATACGAACGC+TGG | + | Chr6:92795556-92795575 | None:intergenic | 35.0% | |
AACTTGGCGTAAAAGAATCA+TGG | - | Chr6:92795664-92795683 | MsG0680034683.01.T01:CDS | 35.0% | |
AATATCCTATGCACCCATAT+GGG | - | Chr6:92795311-92795330 | MsG0680034683.01.T01:CDS | 35.0% | |
ACTGAGAAGACTAAAGAACT+TGG | - | Chr6:92795804-92795823 | MsG0680034683.01.T01:CDS | 35.0% | |
AGGCTATAAATCTCCCATAT+GGG | + | Chr6:92795327-92795346 | None:intergenic | 35.0% | |
ATAGATGTATCATGGTAGCA+AGG | + | Chr6:92794877-92794896 | None:intergenic | 35.0% | |
ATAGCCTAAGGTGTAATTCT+TGG | - | Chr6:92795340-92795359 | MsG0680034683.01.T01:CDS | 35.0% | |
ATATTCCTCCAATGAAGAGA+CGG | + | Chr6:92795875-92795894 | None:intergenic | 35.0% | |
ATCTCCAAATCCATTTCAAG+AGG | - | Chr6:92794990-92795009 | MsG0680034683.01.T01:CDS | 35.0% | |
ATCTTTCACCGGATAGTAAA+TGG | + | Chr6:92794948-92794967 | None:intergenic | 35.0% | |
ATTGTTCTCCTTAAAAAGGG+AGG | - | Chr6:92795057-92795076 | MsG0680034683.01.T01:CDS | 35.0% | |
CAATGGAATATGTCATTGGT+GGG | - | Chr6:92795425-92795444 | MsG0680034683.01.T01:CDS | 35.0% | |
CAGCCTAAAAAATTGAAGAC+AGG | + | Chr6:92795021-92795040 | None:intergenic | 35.0% | |
CATATTCCATTGAAGCACAA+TGG | + | Chr6:92795417-92795436 | None:intergenic | 35.0% | |
CTGGAAGTAAAAGAAAGGTT+AGG | - | Chr6:92794695-92794714 | MsG0680034683.01.T01:CDS | 35.0% | |
GAATAAGCGAGTCAAAACTT+CGG | - | Chr6:92795250-92795269 | MsG0680034683.01.T01:CDS | 35.0% | |
GACTCTTACCATTTACTATC+CGG | - | Chr6:92794937-92794956 | MsG0680034683.01.T01:CDS | 35.0% | |
GCTTCAATGGAATATGTCAT+TGG | - | Chr6:92795421-92795440 | MsG0680034683.01.T01:CDS | 35.0% | |
GGAGCTTCAAATGATGTTTA+TGG | - | Chr6:92795168-92795187 | MsG0680034683.01.T01:CDS | 35.0% | |
TAGATGTATCATGGTAGCAA+GGG | + | Chr6:92794876-92794895 | None:intergenic | 35.0% | |
TAGGCTATAAATCTCCCATA+TGG | + | Chr6:92795328-92795347 | None:intergenic | 35.0% | |
TATGGGAGATTTATAGCCTA+AGG | - | Chr6:92795328-92795347 | MsG0680034683.01.T01:CDS | 35.0% | |
TCAATGGAATATGTCATTGG+TGG | - | Chr6:92795424-92795443 | MsG0680034683.01.T01:CDS | 35.0% | |
TTCTCCAAGAATTACACCTT+AGG | + | Chr6:92795347-92795366 | None:intergenic | 35.0% | |
TTGTTCTCCTTAAAAAGGGA+GGG | - | Chr6:92795058-92795077 | MsG0680034683.01.T01:CDS | 35.0% | |
! | AATATGCCTTGTTGGAATTC+TGG | - | Chr6:92795378-92795397 | MsG0680034683.01.T01:CDS | 35.0% |
! | AGACGTTTAGTGGTGTTAAA+TGG | - | Chr6:92795579-92795598 | MsG0680034683.01.T01:CDS | 35.0% |
! | CTTGATGTTAAGCGTTGTAT+TGG | - | Chr6:92795714-92795733 | MsG0680034683.01.T01:CDS | 35.0% |
! | GAAGGTATGTCTAAAGGTAT+AGG | + | Chr6:92795522-92795541 | None:intergenic | 35.0% |
! | TGGACTAAACTCTTTGTTGT+TGG | - | Chr6:92795684-92795703 | MsG0680034683.01.T01:CDS | 35.0% |
!! | ACTAAAGAACTTGGTGTTGA+AGG | - | Chr6:92795813-92795832 | MsG0680034683.01.T01:CDS | 35.0% |
!! | ATCTCAATTTTGGGTGAACT+TGG | - | Chr6:92795648-92795667 | MsG0680034683.01.T01:CDS | 35.0% |
ACGCTGGTATCTTTGATTGA+AGG | + | Chr6:92795540-92795559 | None:intergenic | 40.0% | |
CAACGCTTAACATCAAGCAA+TGG | + | Chr6:92795711-92795730 | None:intergenic | 40.0% | |
GCATAGGATATTTCATCCCA+TGG | + | Chr6:92795303-92795322 | None:intergenic | 40.0% | |
TATGGTCCATTGTGCTTCAA+TGG | - | Chr6:92795408-92795427 | MsG0680034683.01.T01:CDS | 40.0% | |
TTGAAGCACAATGGACCATA+TGG | + | Chr6:92795408-92795427 | None:intergenic | 40.0% | |
TTGGATGCGTAAACAAAGCA+TGG | - | Chr6:92794785-92794804 | MsG0680034683.01.T01:CDS | 40.0% | |
! | ACAGGGTTTTCCTCTTGAAA+TGG | + | Chr6:92795003-92795022 | None:intergenic | 40.0% |
! | TGTTAAGCGTTGTATTGGAG+CGG | - | Chr6:92795719-92795738 | MsG0680034683.01.T01:CDS | 40.0% |
AACTTCGGCTTCTCAATGTG+CGG | - | Chr6:92795265-92795284 | MsG0680034683.01.T01:CDS | 45.0% | |
AAGGAAAGCCGTCTCTTCAT+TGG | - | Chr6:92795864-92795883 | MsG0680034683.01.T01:CDS | 45.0% | |
AATCTCCCATATGGGTGCAT+AGG | + | Chr6:92795319-92795338 | None:intergenic | 45.0% | |
ATGCCATGAGATCGAAGCAA+TGG | + | Chr6:92795607-92795626 | None:intergenic | 45.0% | |
CCTTGAACTCATGTGTAGCT+GGG | + | Chr6:92795107-92795126 | None:intergenic | 45.0% | |
GATCCATTGCTTCGATCTCA+TGG | - | Chr6:92795601-92795620 | MsG0680034683.01.T01:CDS | 45.0% | |
TGGAATTCTGGTGCACCATA+TGG | - | Chr6:92795390-92795409 | MsG0680034683.01.T01:CDS | 45.0% | |
! | TCATTTGAAGCTCCCCGATA+AGG | + | Chr6:92795162-92795181 | None:intergenic | 45.0% |
!!! | TTAGGCTGTGCTGCTTTTAC+TGG | - | Chr6:92795033-92795052 | MsG0680034683.01.T01:CDS | 45.0% |
ATAAGGTGGTACAGACCGAG+CGG | + | Chr6:92795145-92795164 | None:intergenic | 50.0% | |
CCCAGCTACACATGAGTTCA+AGG | - | Chr6:92795104-92795123 | MsG0680034683.01.T01:CDS | 50.0% | |
CTCCTTAAAAAGGGAGGGCA+AGG | - | Chr6:92795063-92795082 | MsG0680034683.01.T01:CDS | 50.0% | |
CTCGGTCTGTACCACCTTAT+CGG | - | Chr6:92795145-92795164 | MsG0680034683.01.T01:CDS | 50.0% | |
GAAAGCCGTCTCTTCATTGG+AGG | - | Chr6:92795867-92795886 | MsG0680034683.01.T01:CDS | 50.0% | |
GCCTTGAACTCATGTGTAGC+TGG | + | Chr6:92795108-92795127 | None:intergenic | 50.0% | |
GGTGCACCAGAATTCCAACA+AGG | + | Chr6:92795387-92795406 | None:intergenic | 50.0% | |
GTATCATGGTAGCAAGGGTG+AGG | + | Chr6:92794871-92794890 | None:intergenic | 50.0% | |
TCGGTCTGTACCACCTTATC+GGG | - | Chr6:92795146-92795165 | MsG0680034683.01.T01:CDS | 50.0% | |
TGTATTGGAGCGGCGAAGAA+TGG | - | Chr6:92795729-92795748 | MsG0680034683.01.T01:CDS | 50.0% | |
! | TGCCTTGCCCTCCCTTTTTA+AGG | + | Chr6:92795068-92795087 | None:intergenic | 50.0% |
! | TTTGAAGCTCCCCGATAAGG+TGG | + | Chr6:92795159-92795178 | None:intergenic | 50.0% |
CGGTCTGTACCACCTTATCG+GGG | - | Chr6:92795147-92795166 | MsG0680034683.01.T01:CDS | 55.0% | |
GCGGAAGGAAGATGTGCCAT+GGG | - | Chr6:92795284-92795303 | MsG0680034683.01.T01:CDS | 55.0% | |
GGCAAGGCACACTTGTGTTG+TGG | - | Chr6:92795079-92795098 | MsG0680034683.01.T01:CDS | 55.0% | |
TAAGGTGGTACAGACCGAGC+GGG | + | Chr6:92795144-92795163 | None:intergenic | 55.0% | |
TCGGCTTCTCAATGTGCGGA+AGG | - | Chr6:92795269-92795288 | MsG0680034683.01.T01:CDS | 55.0% | |
TGCGGAAGGAAGATGTGCCA+TGG | - | Chr6:92795283-92795302 | MsG0680034683.01.T01:CDS | 55.0% | |
AAGGTGGTACAGACCGAGCG+GGG | + | Chr6:92795143-92795162 | None:intergenic | 60.0% | |
CCATACCTCCCAGCCCCGCT+CGG | - | Chr6:92795127-92795146 | MsG0680034683.01.T01:CDS | 70.0% | |
GGTACAGACCGAGCGGGGCT+GGG | + | Chr6:92795138-92795157 | None:intergenic | 70.0% | |
TGGTACAGACCGAGCGGGGC+TGG | + | Chr6:92795139-92795158 | None:intergenic | 70.0% | |
ACAGACCGAGCGGGGCTGGG+AGG | + | Chr6:92795135-92795154 | None:intergenic | 75.0% | |
CCGAGCGGGGCTGGGAGGTA+TGG | + | Chr6:92795130-92795149 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 92794682 | 92795905 | 92794682 | ID=MsG0680034683.01;Name=MsG0680034683.01 |
Chr6 | mRNA | 92794682 | 92795905 | 92794682 | ID=MsG0680034683.01.T01;Parent=MsG0680034683.01;Name=MsG0680034683.01.T01;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|407 |
Chr6 | exon | 92794682 | 92795905 | 92794682 | ID=MsG0680034683.01.T01:exon:12939;Parent=MsG0680034683.01.T01 |
Chr6 | CDS | 92794682 | 92795905 | 92794682 | ID=MsG0680034683.01.T01:cds;Parent=MsG0680034683.01.T01 |
Gene Sequence |
Protein sequence |