AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030084.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030084.01.T01 MTR_5g097350 70.076 264 51 4 1 247 97 349 1.47e-125 362
MsG0580030084.01.T01 MTR_8g012090 48.846 260 91 9 1 243 81 315 1.50e-69 218
MsG0580030084.01.T01 MTR_5g097330 45.956 272 107 10 1 242 90 351 7.39e-69 218
MsG0580030084.01.T01 MTR_0129s0070 43.820 267 116 6 1 242 88 345 7.07e-65 208
MsG0580030084.01.T01 MTR_6g086825 44.853 272 121 8 1 245 143 412 3.87e-63 205
MsG0580030084.01.T01 MTR_0129s0120 42.322 267 120 6 1 242 88 345 7.97e-62 200
MsG0580030084.01.T01 MTR_0054s0090 43.110 283 110 11 1 245 89 358 1.28e-59 194
MsG0580030084.01.T01 MTR_6g079810 41.696 283 121 8 1 245 139 415 1.32e-59 196
MsG0580030084.01.T01 MTR_0054s0100 43.310 284 110 11 1 245 89 360 5.18e-59 193
MsG0580030084.01.T01 MTR_8g063440 42.529 261 121 8 1 243 84 333 1.00e-57 189
MsG0580030084.01.T01 MTR_3g011120 44.015 259 116 10 1 243 85 330 3.09e-57 187
MsG0580030084.01.T01 MTR_4g028510 42.545 275 120 10 1 245 88 354 1.13e-56 188
MsG0580030084.01.T01 MTR_4g028660 43.015 272 121 10 1 245 87 351 2.49e-56 186
MsG0580030084.01.T01 MTR_4g027450 43.015 272 121 10 1 245 87 351 2.49e-56 186
MsG0580030084.01.T01 MTR_6g090250 41.077 297 117 11 1 243 82 374 3.47e-56 186
MsG0580030084.01.T01 MTR_4g130330 43.321 277 117 10 1 245 74 342 3.50e-56 185
MsG0580030084.01.T01 MTR_5g037680 41.699 259 124 8 1 243 85 332 8.58e-56 186
MsG0580030084.01.T01 MTR_7g017130 41.445 263 128 8 1 243 91 347 1.11e-55 184
MsG0580030084.01.T01 MTR_7g017170 41.445 263 128 8 1 243 91 347 1.33e-55 184
MsG0580030084.01.T01 MTR_6g080680 43.071 267 120 8 1 245 91 347 2.97e-55 183
MsG0580030084.01.T01 MTR_7g017040 43.609 266 124 7 1 243 86 348 4.93e-55 182
MsG0580030084.01.T01 MTR_6g078010 42.308 260 125 8 2 245 37 287 1.01e-54 180
MsG0580030084.01.T01 MTR_0134s0060 40.559 286 124 8 1 245 84 364 1.36e-54 181
MsG0580030084.01.T01 MTR_4g007940 37.234 282 121 9 1 243 28 292 1.62e-54 179
MsG0580030084.01.T01 MTR_4g028750 38.889 270 134 8 1 245 87 350 8.42e-54 179
MsG0580030084.01.T01 MTR_4g055820 40.146 274 122 8 1 241 87 351 9.63e-54 178
MsG0580030084.01.T01 MTR_6g079770 40.418 287 123 9 1 245 89 369 1.07e-53 179
MsG0580030084.01.T01 MTR_0129s0050 39.716 282 122 6 1 242 84 357 3.87e-53 177
MsG0580030084.01.T01 MTR_6g087620 41.245 257 122 8 1 245 1 240 4.83e-53 174
MsG0580030084.01.T01 MTR_6g478230 41.948 267 127 8 1 245 99 359 6.00e-53 177
MsG0580030084.01.T01 MTR_6g079790 40.458 262 125 7 13 245 2 261 6.16e-53 174
MsG0580030084.01.T01 MTR_2g038680 39.209 278 124 9 1 242 91 359 8.99e-53 177
MsG0580030084.01.T01 MTR_2g066150 40.079 252 122 8 1 243 78 309 8.64e-52 173
MsG0580030084.01.T01 MTR_7g079640 40.562 249 125 7 4 242 89 324 1.25e-51 173
MsG0580030084.01.T01 MTR_2g104340 40.217 276 122 8 1 242 80 346 1.96e-51 173
MsG0580030084.01.T01 MTR_5g097220 39.373 287 124 7 1 245 80 358 2.81e-51 173
MsG0580030084.01.T01 MTR_4g102410 41.111 270 120 10 4 243 139 399 3.79e-51 173
MsG0580030084.01.T01 MTR_4g014370 40.000 285 116 11 1 242 86 358 6.86e-51 172
MsG0580030084.01.T01 MTR_4g028680 41.026 273 126 9 1 245 87 352 9.45e-51 171
MsG0580030084.01.T01 MTR_5g059430 37.319 276 131 9 1 243 109 375 3.79e-50 170
MsG0580030084.01.T01 MTR_1g007450 43.590 273 119 11 1 245 83 348 4.84e-50 170
MsG0580030084.01.T01 MTR_4g117550 38.545 275 110 9 1 247 91 334 7.22e-50 168
MsG0580030084.01.T01 MTR_6g090180 39.427 279 128 7 1 245 119 390 8.81e-50 169
MsG0580030084.01.T01 MTR_8g464770 41.085 258 125 9 1 243 85 330 9.47e-50 168
MsG0580030084.01.T01 MTR_6g461660 41.606 274 117 10 1 242 88 350 1.51e-49 168
MsG0580030084.01.T01 MTR_5g096910 37.729 273 121 8 1 243 89 342 1.65e-49 168
MsG0580030084.01.T01 MTR_2g021950 39.700 267 129 9 1 242 89 348 3.43e-49 167
MsG0580030084.01.T01 MTR_7g111700 40.351 285 100 11 1 247 75 327 9.65e-49 165
MsG0580030084.01.T01 MTR_8g063330 36.765 272 126 9 1 243 89 343 1.07e-48 167
MsG0580030084.01.T01 MTR_1g007410 38.652 282 133 9 1 252 96 367 1.14e-48 166
MsG0580030084.01.T01 MTR_2g066170 36.122 263 139 7 1 243 83 336 2.33e-48 165
MsG0580030084.01.T01 MTR_8g039500 35.798 257 145 5 1 243 77 327 2.35e-48 164
MsG0580030084.01.T01 MTR_7g069550 37.956 274 119 10 3 241 92 349 1.28e-47 163
MsG0580030084.01.T01 MTR_7g016930 42.975 242 110 7 3 225 72 304 1.76e-47 161
MsG0580030084.01.T01 MTR_2g065840 38.577 267 129 10 1 243 82 337 1.87e-47 162
MsG0580030084.01.T01 MTR_5g064700 37.631 287 133 11 1 242 35 320 3.57e-47 161
MsG0580030084.01.T01 MTR_8g064890 39.695 262 120 9 6 243 91 338 4.64e-47 161
MsG0580030084.01.T01 MTR_5g096630 36.331 278 136 10 1 243 92 363 5.84e-47 162
MsG0580030084.01.T01 MTR_8g013000 39.114 271 120 9 4 242 87 344 8.57e-47 161
MsG0580030084.01.T01 MTR_1g050312 38.735 253 113 9 1 240 16 239 9.19e-47 158
MsG0580030084.01.T01 MTR_5g069390 37.778 270 135 9 1 243 104 367 9.63e-47 163
MsG0580030084.01.T01 MTR_2g021800 38.043 276 132 9 1 242 97 367 1.42e-46 160
MsG0580030084.01.T01 MTR_2g034700 39.921 253 123 8 4 243 88 324 1.84e-46 159
MsG0580030084.01.T01 MTR_2g065860 37.638 271 131 11 1 245 82 340 1.94e-46 160
MsG0580030084.01.T01 MTR_1g007430 39.630 270 114 10 1 242 67 315 1.46e-45 156
MsG0580030084.01.T01 MTR_2g104280 35.599 309 145 10 4 268 86 384 1.87e-45 157
MsG0580030084.01.T01 MTR_8g467670 40.076 262 121 12 1 243 85 329 2.67e-45 157
MsG0580030084.01.T01 MTR_8g041270 37.367 281 128 9 1 242 85 356 4.88e-45 156
MsG0580030084.01.T01 MTR_5g097680 37.755 294 127 11 1 242 90 379 1.40e-44 155
MsG0580030084.01.T01 MTR_5g074800 36.996 273 125 10 3 241 35 294 2.35e-44 153
MsG0580030084.01.T01 MTR_5g022850 37.175 269 132 8 1 241 41 300 4.77e-44 152
MsG0580030084.01.T01 MTR_2g022000 37.729 273 131 9 4 242 99 366 5.90e-44 154
MsG0580030084.01.T01 MTR_2g066200 35.115 262 145 9 1 243 83 338 7.76e-44 153
MsG0580030084.01.T01 MTR_0831s0010 36.900 271 125 13 1 246 124 373 1.65e-43 153
MsG0580030084.01.T01 MTR_7g023800 37.023 262 116 7 1 245 34 263 2.26e-43 149
MsG0580030084.01.T01 MTR_4g016000 40.092 217 77 7 54 244 2 191 5.69e-43 146
MsG0580030084.01.T01 MTR_5g074850 39.085 284 119 12 3 245 106 376 7.90e-43 155
MsG0580030084.01.T01 MTR_5g092850 38.489 278 124 9 4 245 86 352 8.38e-43 150
MsG0580030084.01.T01 MTR_8g036970 37.452 259 107 10 1 250 71 283 1.51e-42 149
MsG0580030084.01.T01 MTR_5g023970 51.408 142 59 3 105 243 11 145 1.58e-42 144
MsG0580030084.01.T01 MTR_5g086590 41.284 218 96 8 43 243 7 209 3.11e-42 145
MsG0580030084.01.T01 MTR_5g092860 36.014 286 114 8 1 245 68 325 3.52e-42 148
MsG0580030084.01.T01 MTR_8g063350 35.145 276 128 15 6 250 50 305 1.05e-41 146
MsG0580030084.01.T01 MTR_5g075370 38.194 288 119 12 3 245 79 352 6.21e-41 150
MsG0580030084.01.T01 MTR_2g021770 32.852 277 141 7 1 242 90 356 9.57e-41 145
MsG0580030084.01.T01 MTR_2g064950 35.401 274 123 8 4 242 85 339 2.89e-40 144
MsG0580030084.01.T01 MTR_5g043605 37.121 264 141 11 2 247 45 301 3.04e-40 143
MsG0580030084.01.T01 MTR_6g004450 42.623 183 82 6 76 243 45 219 5.69e-39 137
MsG0580030084.01.T01 MTR_5g068490 38.912 239 124 11 10 243 8 229 1.90e-38 136
MsG0580030084.01.T01 MTR_8g063370 33.333 270 145 11 4 250 94 351 3.15e-38 138
MsG0580030084.01.T01 MTR_7g104710 39.252 214 109 7 1 209 88 285 7.96e-38 135
MsG0580030084.01.T01 MTR_5g076490 35.636 275 120 9 1 240 31 283 1.03e-37 135
MsG0580030084.01.T01 MTR_5g024260 35.036 274 135 11 1 242 92 354 1.12e-37 137
MsG0580030084.01.T01 MTR_1g053510 35.842 279 123 8 6 243 93 356 2.51e-37 136
MsG0580030084.01.T01 MTR_8g046310 37.452 259 123 12 4 243 90 328 2.92e-37 135
MsG0580030084.01.T01 MTR_5g091140 34.944 269 122 10 1 242 122 364 4.87e-37 135
MsG0580030084.01.T01 MTR_6g090260 48.276 145 66 3 105 245 75 214 1.22e-35 128
MsG0580030084.01.T01 MTR_5g096900 36.626 243 115 9 1 216 82 312 1.60e-35 129
MsG0580030084.01.T01 MTR_5g072060 36.719 256 132 9 3 241 79 321 1.74e-35 134
MsG0580030084.01.T01 MTR_5g097850 35.865 237 92 9 22 243 5 196 1.37e-34 125
MsG0580030084.01.T01 MTR_8g033110 33.446 296 123 11 3 243 88 364 1.44e-34 129
MsG0580030084.01.T01 MTR_5g098950 40.000 210 76 7 51 243 90 266 7.39e-34 124
MsG0580030084.01.T01 MTR_3g018750 41.026 195 84 6 78 245 1 191 6.91e-33 120
MsG0580030084.01.T01 MTR_8g033090 31.741 293 130 10 3 243 88 362 1.87e-31 120
MsG0580030084.01.T01 MTR_1g098180 33.065 248 111 11 1 234 90 296 3.08e-31 119
MsG0580030084.01.T01 MTR_4g014370 35.484 248 96 9 1 242 97 286 3.28e-31 118
MsG0580030084.01.T01 MTR_8g033140 30.537 298 130 11 1 243 92 367 3.56e-31 120
MsG0580030084.01.T01 MTR_6g009350 37.968 187 89 7 76 243 4 182 5.61e-31 114
MsG0580030084.01.T01 MTR_7g017150 46.099 141 66 4 105 242 82 215 6.10e-31 116
MsG0580030084.01.T01 MTR_7g019250 36.585 205 82 6 63 243 206 386 7.10e-31 120
MsG0580030084.01.T01 MTR_7g017120 46.099 141 66 4 105 242 81 214 2.29e-30 114
MsG0580030084.01.T01 MTR_2g021920 37.073 205 89 8 70 242 28 224 3.14e-30 114
MsG0580030084.01.T01 MTR_8g032980 32.441 299 139 13 1 243 80 371 3.51e-30 117
MsG0580030084.01.T01 MTR_8g046200 31.126 302 131 11 4 243 86 372 4.17e-30 117
MsG0580030084.01.T01 MTR_7g101200 37.681 207 92 9 49 242 38 220 7.54e-30 112
MsG0580030084.01.T01 MTR_5g091150 35.217 230 94 8 13 217 2 201 4.07e-29 109
MsG0580030084.01.T01 MTR_8g064790 35.169 236 99 10 1 229 84 272 2.52e-28 110
MsG0580030084.01.T01 MTR_2g104260 35.644 202 88 7 4 173 86 277 3.25e-28 109
MsG0580030084.01.T01 MTR_8g063310 27.303 304 167 13 6 267 94 385 3.31e-28 111
MsG0580030084.01.T01 MTR_8g046220 30.897 301 132 10 4 250 91 369 6.00e-28 110
MsG0580030084.01.T01 MTR_5g097820 36.957 184 83 8 3 165 98 269 6.36e-28 108
MsG0580030084.01.T01 MTR_1g076810 43.137 153 70 5 1 137 90 241 2.28e-27 111
MsG0580030084.01.T01 MTR_5g097540 41.135 141 69 4 105 243 97 225 4.24e-26 104
MsG0580030084.01.T01 MTR_8g033000 30.201 298 137 11 3 243 30 313 3.16e-25 103
MsG0580030084.01.T01 MTR_8g035690 30.040 253 111 9 25 229 3 237 2.38e-23 97.1
MsG0580030084.01.T01 MTR_5g094350 34.444 180 81 6 36 182 101 276 3.12e-23 96.3
MsG0580030084.01.T01 MTR_5g037190 37.356 174 90 6 1 167 89 250 5.45e-23 94.7
MsG0580030084.01.T01 MTR_8g018110 30.345 290 123 10 3 243 88 347 5.13e-22 94.7
MsG0580030084.01.T01 MTR_2g031640 29.918 244 136 11 11 229 62 295 1.20e-21 93.6
MsG0580030084.01.T01 MTR_2g026010 29.388 245 140 12 11 229 60 297 1.42e-21 93.2
MsG0580030084.01.T01 MTR_6g070880 34.810 158 69 6 1 125 103 259 1.75e-21 90.9
MsG0580030084.01.T01 MTR_6g071420 34.810 158 69 6 1 125 103 259 1.75e-21 90.9
MsG0580030084.01.T01 MTR_2g028140 28.111 217 129 9 45 242 126 334 8.58e-21 91.3
MsG0580030084.01.T01 MTR_1g068835 27.273 231 145 8 35 251 92 313 3.09e-20 89.4
MsG0580030084.01.T01 MTR_3g009310 32.727 220 114 9 21 229 130 326 3.67e-20 89.4
MsG0580030084.01.T01 MTR_2g031720 28.436 211 127 9 35 229 97 299 3.78e-20 89.4
MsG0580030084.01.T01 MTR_2g028130 28.761 226 129 9 45 251 125 337 7.26e-20 88.6
MsG0580030084.01.T01 MTR_3g030620 46.218 119 50 4 133 243 20 132 1.30e-19 84.0
MsG0580030084.01.T01 MTR_4g094400 44.545 110 43 3 133 228 7 112 4.35e-19 81.3
MsG0580030084.01.T01 MTR_5g066420 40.000 125 62 5 136 251 1 121 1.60e-18 80.5
MsG0580030084.01.T01 MTR_3g083010 26.667 225 139 7 45 251 127 343 2.38e-18 84.3
MsG0580030084.01.T01 MTR_2g025420 28.507 221 129 8 52 251 132 344 3.94e-18 83.6
MsG0580030084.01.T01 MTR_3g013770 30.263 228 120 9 19 229 118 323 1.10e-17 82.4
MsG0580030084.01.T01 MTR_5g096920 40.541 111 54 3 136 243 1 102 1.11e-17 78.2
MsG0580030084.01.T01 MTR_8g073570 42.391 92 51 2 1 91 80 170 2.06e-17 77.8
MsG0580030084.01.T01 MTR_1g050308 31.579 152 85 6 1 136 105 253 2.64e-17 80.9
MsG0580030084.01.T01 MTR_4g070550 27.451 204 121 9 45 229 120 315 3.17e-17 80.9
MsG0580030084.01.T01 MTR_2g024100 30.244 205 114 9 45 229 115 310 4.34e-17 80.5
MsG0580030084.01.T01 MTR_1g047080 29.577 213 111 9 1 195 29 220 5.15e-17 79.3
MsG0580030084.01.T01 MTR_4g133170 26.482 253 151 13 11 242 70 308 8.71e-17 79.7
MsG0580030084.01.T01 MTR_6g465360 36.667 120 58 4 2 106 135 251 9.13e-17 78.6
MsG0580030084.01.T01 MTR_6g079730 47.191 89 43 2 161 245 14 102 9.86e-17 75.5
MsG0580030084.01.T01 MTR_2g028160 29.224 219 127 9 50 250 130 338 1.16e-16 79.3
MsG0580030084.01.T01 MTR_1g068860 27.354 223 139 7 35 242 92 306 2.19e-16 78.6
MsG0580030084.01.T01 MTR_2g426090 27.523 218 127 7 35 229 101 310 2.21e-16 78.6
MsG0580030084.01.T01 MTR_6g048120 29.048 210 127 7 35 235 140 336 2.21e-16 78.6
MsG0580030084.01.T01 MTR_0667s0010 27.586 203 120 8 45 229 113 306 2.27e-16 78.6
MsG0580030084.01.T01 MTR_1g068875 26.407 231 144 8 12 229 73 290 2.62e-16 78.2
MsG0580030084.01.T01 MTR_2g025960 26.263 198 119 7 49 229 28 215 2.68e-16 77.4
MsG0580030084.01.T01 MTR_2g426070 27.273 220 137 7 45 250 124 334 3.47e-16 77.8
MsG0580030084.01.T01 MTR_1g115205 32.544 169 68 4 2 142 85 235 5.51e-16 75.9
MsG0580030084.01.T01 MTR_2g024110 27.477 222 130 12 35 238 94 302 2.23e-15 75.5
MsG0580030084.01.T01 MTR_5g057790 31.579 209 112 11 35 231 143 332 3.37e-15 75.1
MsG0580030084.01.T01 MTR_4g006270 24.895 237 148 8 14 237 63 282 3.81e-15 75.1
MsG0580030084.01.T01 MTR_6g065980 27.876 226 134 11 28 248 107 308 4.19e-15 74.7
MsG0580030084.01.T01 MTR_2g031680 29.108 213 125 10 33 229 90 292 5.96e-15 74.3
MsG0580030084.01.T01 MTR_6g021880 28.378 222 129 10 42 247 131 338 6.81e-15 73.9
MsG0580030084.01.T01 MTR_5g096050 44.037 109 51 5 136 235 1 108 1.32e-14 68.9
MsG0580030084.01.T01 MTR_3g083640 29.237 236 128 12 12 237 136 342 1.43e-14 73.2
MsG0580030084.01.T01 MTR_2g078900 27.753 227 140 10 11 233 111 317 2.28e-14 72.4
MsG0580030084.01.T01 MTR_4g023130 28.877 187 113 8 52 234 79 249 3.13e-14 71.6
MsG0580030084.01.T01 MTR_3g013740 27.442 215 114 7 35 229 150 342 3.82e-14 72.0
MsG0580030084.01.T01 MTR_2g425980 25.728 206 122 8 45 229 117 312 5.13e-14 71.6
MsG0580030084.01.T01 MTR_2g031700 29.213 178 100 8 11 171 62 230 7.90e-14 70.5
MsG0580030084.01.T01 MTR_0044s0300 27.500 200 130 7 35 233 138 323 8.69e-14 70.9
MsG0580030084.01.T01 MTR_6g007135 26.582 237 147 9 22 242 108 333 9.13e-14 70.9
MsG0580030084.01.T01 MTR_3g011060 29.469 207 119 8 35 229 133 324 2.74e-13 69.3
MsG0580030084.01.T01 MTR_2g021155 28.774 212 128 9 35 237 131 328 2.97e-13 70.1
MsG0580030084.01.T01 MTR_4g023080 28.342 187 114 8 52 234 120 290 8.91e-13 67.8
MsG0580030084.01.T01 MTR_3g024110 28.846 208 126 9 34 240 201 387 9.22e-13 68.2
MsG0580030084.01.T01 MTR_3g436150 29.817 218 124 12 26 229 129 331 1.03e-12 67.8
MsG0580030084.01.T01 MTR_3g030250 27.273 198 116 9 35 229 138 310 1.73e-12 67.0
MsG0580030084.01.T01 MTR_3g047540 42.466 73 32 2 105 177 6 68 2.02e-12 62.0
MsG0580030084.01.T01 MTR_5g086780 38.462 117 54 4 149 247 97 213 2.03e-12 65.5
MsG0580030084.01.T01 MTR_3g006670 33.175 211 104 15 35 229 147 336 2.33e-12 66.6
MsG0580030084.01.T01 MTR_7g070440 24.380 242 151 10 28 244 93 327 2.55e-12 66.6
MsG0580030084.01.T01 MTR_6g007150 26.033 242 151 10 4 228 34 264 3.86e-12 65.9
MsG0580030084.01.T01 MTR_2g078870 25.446 224 139 11 11 229 36 236 4.28e-12 65.5
MsG0580030084.01.T01 MTR_3g036335 28.230 209 127 9 27 229 135 326 4.46e-12 65.9
MsG0580030084.01.T01 MTR_2g022020 52.727 55 25 1 190 243 18 72 7.78e-12 61.2
MsG0580030084.01.T01 MTR_4g006350 27.143 210 130 7 34 227 597 799 1.01e-11 65.5
MsG0580030084.01.T01 MTR_4g055060 26.667 210 125 7 34 229 127 321 1.10e-11 64.7
MsG0580030084.01.T01 MTR_2g021860 38.710 93 50 3 11 98 13 103 1.36e-11 61.2
MsG0580030084.01.T01 MTR_7g056710 27.826 230 135 11 21 235 104 317 1.53e-11 64.3
MsG0580030084.01.T01 MTR_8g101580 24.638 207 141 7 35 236 141 337 1.56e-11 64.3
MsG0580030084.01.T01 MTR_5g097650 46.875 64 34 0 9 72 92 155 1.61e-11 61.6
MsG0580030084.01.T01 MTR_3g011100 27.358 212 124 10 35 233 335 529 2.68e-11 63.9
MsG0580030084.01.T01 MTR_5g097660 58.333 48 20 0 182 229 7 54 2.95e-11 59.7
MsG0580030084.01.T01 MTR_1g097560 26.131 199 131 5 35 233 132 314 3.72e-11 63.2
MsG0580030084.01.T01 MTR_7g055953 26.946 167 111 5 74 235 85 245 3.73e-11 62.8
MsG0580030084.01.T01 MTR_7g061050 27.551 196 124 6 47 235 133 317 4.71e-11 62.8
MsG0580030084.01.T01 MTR_5g021880 29.493 217 115 13 35 230 184 383 7.21e-11 62.4
MsG0580030084.01.T01 MTR_1004s0010 26.360 239 153 10 11 248 95 311 7.45e-11 62.0
MsG0580030084.01.T01 MTR_5g021880 29.493 217 115 13 35 230 184 383 7.50e-11 62.4
MsG0580030084.01.T01 MTR_3g010390 25.909 220 138 9 31 236 133 341 7.90e-11 62.0
MsG0580030084.01.T01 MTR_7g056820 26.991 226 130 11 35 240 110 320 8.36e-11 62.0
MsG0580030084.01.T01 MTR_6g053260 28.829 222 123 10 27 235 431 630 8.65e-11 62.4
MsG0580030084.01.T01 MTR_3g010970 27.679 224 114 14 34 245 154 341 8.84e-11 62.0
MsG0580030084.01.T01 MTR_5g021880 29.493 217 115 13 35 230 184 383 9.44e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030084.01.T01 AT3G06240 28.216 241 152 10 19 250 154 382 7.66e-20 88.6

Find 55 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATACTTAGCTGTGTTAAA+TGG 0.176449 5:-106457633 MsG0580030084.01.T01:CDS
CTCTTCATGGAGATGGATTC+AGG 0.193702 5:-106458187 MsG0580030084.01.T01:CDS
TACAAGTTCCGGAAATAAAA+TGG 0.200173 5:-106457826 MsG0580030084.01.T01:CDS
TTCACTCTTCTTCAACTTCA+TGG 0.228924 5:-106457975 MsG0580030084.01.T01:CDS
CTTCTTCAACTTCATGGGTT+TGG 0.315135 5:-106457969 MsG0580030084.01.T01:CDS
ATGGAGATGGATTCAGGAAT+AGG 0.317472 5:-106458181 MsG0580030084.01.T01:CDS
CCGACAAACATGAATGATAT+TGG 0.350134 5:-106457666 MsG0580030084.01.T01:CDS
GCTTATAGTTATTTCCAATA+TGG 0.364186 5:+106457940 None:intergenic
GGAATAGGGTTAAATTAGAT+TGG 0.379001 5:-106458166 MsG0580030084.01.T01:CDS
CCAATATCATTCATGTTTGT+CGG 0.382068 5:+106457666 None:intergenic
GGGTTTGGTTATGACCATAT+TGG 0.390538 5:-106457954 MsG0580030084.01.T01:CDS
AGGAGGAGGCAGAGAGATGA+AGG 0.392726 5:-106454183 MsG0580030084.01.T01:CDS
AGGAATTACTTTGATTTCCT+TGG 0.401072 5:+106458025 None:intergenic
GTAGATATGCCTACAAGTTC+CGG 0.401251 5:-106457837 MsG0580030084.01.T01:CDS
AGTTGAATTTGCAGGAAGAA+AGG 0.402247 5:-106454243 MsG0580030084.01.T01:intron
TCACTCTTCTTCAACTTCAT+GGG 0.405208 5:-106457974 MsG0580030084.01.T01:CDS
TGAGAAGCATAAGGACTAGA+AGG 0.408346 5:+106458005 None:intergenic
GAATATCTCCCACGTGTTGT+AGG 0.410169 5:+106457893 None:intergenic
TGGAGATGGATTCAGGAATA+GGG 0.417439 5:-106458180 MsG0580030084.01.T01:CDS
CATGAGATCGACAGGCCAAT+TGG 0.418150 5:-106457501 MsG0580030084.01.T01:CDS
TATACTTAGCTGTGTTAAAT+GGG 0.422796 5:-106457632 MsG0580030084.01.T01:CDS
CCATTCTTACCCACTCCAAT+TGG 0.449912 5:+106457486 None:intergenic
ACTTTGATTTCCTTGGTAGC+TGG 0.455166 5:+106458032 None:intergenic
TTTGGGTGAAGCTGGGATGA+AGG 0.484069 5:-106457556 MsG0580030084.01.T01:CDS
CGATCCTCGCTGAATAGATT+CGG 0.504357 5:+106458143 None:intergenic
ACAAGTTCCGGAAATAAAAT+GGG 0.504988 5:-106457825 MsG0580030084.01.T01:CDS
TGCATTGATTATAACTCTGA+AGG 0.506244 5:-106458074 MsG0580030084.01.T01:CDS
ACATGGATGGAGTGTGTCAT+TGG 0.508759 5:-106457791 MsG0580030084.01.T01:CDS
CAGAGAGATGAAGGAGGCGG+TGG 0.510526 5:-106454174 MsG0580030084.01.T01:CDS
AAGCTGGGATGAAGGAATCA+TGG 0.517365 5:-106457548 MsG0580030084.01.T01:CDS
GAAGATGAAAGAGACGGTGG+TGG 0.546593 5:-106454218 MsG0580030084.01.T01:CDS
AAGGAAGGTTGAGAAGCATA+AGG 0.547991 5:+106457996 None:intergenic
AGTTGAAGAAGAGTGAAGGA+AGG 0.548496 5:+106457981 None:intergenic
TTGAGTTACATGAGATCGAC+AGG 0.549245 5:-106457509 MsG0580030084.01.T01:CDS
GGATCTGATGAAAGAGGAGG+AGG 0.550575 5:-106454197 MsG0580030084.01.T01:CDS
CTTCTACAACCTACAACACG+TGG 0.552716 5:-106457902 MsG0580030084.01.T01:CDS
CTGAAGGGAGAGTTGTATTG+TGG 0.560278 5:-106458058 MsG0580030084.01.T01:CDS
AATGGGCGGTCATGTGTACA+TGG 0.572820 5:-106457808 MsG0580030084.01.T01:CDS
GGCGGTCATGTGTACATGGA+TGG 0.578659 5:-106457804 MsG0580030084.01.T01:CDS
AGGCAGAGAGATGAAGGAGG+CGG 0.591988 5:-106454177 MsG0580030084.01.T01:CDS
GGTGGTGGATCTGATGAAAG+AGG 0.594546 5:-106454203 MsG0580030084.01.T01:CDS
ATCGACAGGCCAATTGGAGT+GGG 0.595879 5:-106457495 MsG0580030084.01.T01:intron
GATCGACAGGCCAATTGGAG+TGG 0.595987 5:-106457496 MsG0580030084.01.T01:CDS
ATGAAGTTGAAGAAGAGTGA+AGG 0.599351 5:+106457977 None:intergenic
AAGGAAGAAGATGAAAGAGA+CGG 0.615160 5:-106454224 MsG0580030084.01.T01:CDS
GTTAAATGGGTCAATTGCGT+TGG 0.618245 5:-106457619 MsG0580030084.01.T01:CDS
GCATTGATTATAACTCTGAA+GGG 0.630466 5:-106458073 MsG0580030084.01.T01:CDS
GAAGAAGATGAAAGAGACGG+TGG 0.632079 5:-106454221 MsG0580030084.01.T01:CDS
ATTGTGGAATCCAGCTACCA+AGG 0.637961 5:-106458042 MsG0580030084.01.T01:CDS
AGGAGGCAGAGAGATGAAGG+AGG 0.660570 5:-106454180 MsG0580030084.01.T01:CDS
GGTGGATCTGATGAAAGAGG+AGG 0.673244 5:-106454200 MsG0580030084.01.T01:CDS
TTGAGTAAAAGTAAAACACA+TGG 0.690697 5:-106457768 MsG0580030084.01.T01:CDS
AGTTCCGGAAATAAAATGGG+CGG 0.705781 5:-106457822 MsG0580030084.01.T01:CDS
TTCTACAACCTACAACACGT+GGG 0.708963 5:-106457901 MsG0580030084.01.T01:CDS
TTGGCCGAATCTATTCAGCG+AGG 0.787823 5:-106458147 MsG0580030084.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG + Chr5:106455026-106455045 None:intergenic 0.0%
!! AAAAAAAAAAAAAACTTACA+AGG - Chr5:106455034-106455053 MsG0580030084.01.T01:intron 10.0%
!! AAAAAAATTAAAAAATCAGA+AGG - Chr5:106457119-106457138 MsG0580030084.01.T01:intron 10.0%
!! CCAAAATAATATATATTATT+AGG + Chr5:106455745-106455764 None:intergenic 10.0%
!! TGATATATTCTTTATAAAAA+AGG - Chr5:106454897-106454916 MsG0580030084.01.T01:intron 10.0%
!!! ATAAAACAATGATAAATTTT+AGG + Chr5:106456147-106456166 None:intergenic 10.0%
!!! ATACCATTTTAAAAATATTA+AGG - Chr5:106456096-106456115 MsG0580030084.01.T01:intron 10.0%
!!! CCTAATAATATATATTATTT+TGG - Chr5:106455742-106455761 MsG0580030084.01.T01:intron 10.0%
!!! TAAAACAATGATAAATTTTA+GGG + Chr5:106456146-106456165 None:intergenic 10.0%
!!! TTTGTCAATTATAATTTTTT+TGG + Chr5:106455352-106455371 None:intergenic 10.0%
!! AGTTAAAATCTGATTTATTA+TGG + Chr5:106456566-106456585 None:intergenic 15.0%
!!! CATGTTATGTTTTTTTTTTT+TGG - Chr5:106456885-106456904 MsG0580030084.01.T01:intron 15.0%
!!! TATATTGTTCGTTTAATTTA+TGG - Chr5:106456425-106456444 MsG0580030084.01.T01:intron 15.0%
!!! TTTGTTTTTGTTAAATGTTT+TGG - Chr5:106457973-106457992 MsG0580030084.01.T01:CDS 15.0%
!!! TTTTCTTTTAATAACTTACA+AGG + Chr5:106455064-106455083 None:intergenic 15.0%
!! AATAATATCAACATCATCAA+GGG + Chr5:106456797-106456816 None:intergenic 20.0%
!! ATAGTGTGCTAAATAAAATT+AGG + Chr5:106456862-106456881 None:intergenic 20.0%
!! TAATTAAATAATTACACACG+TGG + Chr5:106457061-106457080 None:intergenic 20.0%
!! TGTTCTAATTCTAAATATGT+AGG + Chr5:106455841-106455860 None:intergenic 20.0%
!! TTCATAGATTATCACAAATA+TGG - Chr5:106457647-106457666 MsG0580030084.01.T01:CDS 20.0%
!! TTTCCTATGTATGTTATTAT+GGG - Chr5:106457934-106457953 MsG0580030084.01.T01:CDS 20.0%
!!! ACTTTTGACATATCAATTTT+GGG - Chr5:106454787-106454806 MsG0580030084.01.T01:intron 20.0%
!!! AGATTTTAACTTCTAATTTG+TGG - Chr5:106456575-106456594 MsG0580030084.01.T01:intron 20.0%
!!! AGGATGATTTTAATTTTGAA+GGG + Chr5:106457309-106457328 None:intergenic 20.0%
!!! ATACTGAAAAAGTTGATAAA+TGG - Chr5:106455481-106455500 MsG0580030084.01.T01:intron 20.0%
!!! ATTCTAAATATGTAGGATTT+TGG + Chr5:106455834-106455853 None:intergenic 20.0%
!!! CGACTTTATTTTAAAATTTG+TGG - Chr5:106454238-106454257 MsG0580030084.01.T01:intron 20.0%
!!! GCTCCTTAATATTTTTAAAA+TGG + Chr5:106456102-106456121 None:intergenic 20.0%
!!! TACTTTTGACATATCAATTT+TGG - Chr5:106454786-106454805 MsG0580030084.01.T01:intron 20.0%
!!! TAGGATGATTTTAATTTTGA+AGG + Chr5:106457310-106457329 None:intergenic 20.0%
!!! TCTTCTTATTTTTACATTAG+AGG - Chr5:106455102-106455121 MsG0580030084.01.T01:intron 20.0%
!!! TGTAATTTTTGAAAGAACAT+AGG + Chr5:106457329-106457348 None:intergenic 20.0%
! AAAAGCAAACAAAATTGTCT+TGG + Chr5:106455176-106455195 None:intergenic 25.0%
! AAATTATCACCTATGAAGTA+CGG - Chr5:106457464-106457483 MsG0580030084.01.T01:intron 25.0%
! AATACTTCAGAAGTAATGTT+TGG + Chr5:106455419-106455438 None:intergenic 25.0%
! ACAACAACTTGAACATTATA+TGG + Chr5:106457751-106457770 None:intergenic 25.0%
! ATAGAATGCTATAACATGTA+GGG - Chr5:106455865-106455884 MsG0580030084.01.T01:intron 25.0%
! ATTCCCATAATAACATACAT+AGG + Chr5:106457940-106457959 None:intergenic 25.0%
! CAAAACCATAAGTAATTCTA+AGG - Chr5:106456073-106456092 MsG0580030084.01.T01:intron 25.0%
! CATAATCCAATGTAATTACA+AGG - Chr5:106457551-106457570 MsG0580030084.01.T01:CDS 25.0%
! GAATAATATCAACATCATCA+AGG + Chr5:106456798-106456817 None:intergenic 25.0%
! GTAATGATACAAAGAAAGTA+TGG + Chr5:106455936-106455955 None:intergenic 25.0%
! GTTTCCTATGTATGTTATTA+TGG - Chr5:106457933-106457952 MsG0580030084.01.T01:CDS 25.0%
! TAATTCAAATGGTGAAGAAA+AGG + Chr5:106455313-106455332 None:intergenic 25.0%
! TATACTTAGCTGTGTTAAAT+GGG - Chr5:106454728-106454747 MsG0580030084.01.T01:intron 25.0%
! TATAGAATGCTATAACATGT+AGG - Chr5:106455864-106455883 MsG0580030084.01.T01:intron 25.0%
! TATTTGTGATGCAGATAATT+GGG - Chr5:106455435-106455454 MsG0580030084.01.T01:intron 25.0%
! TTATACTTAGCTGTGTTAAA+TGG - Chr5:106454727-106454746 MsG0580030084.01.T01:intron 25.0%
! TTCAATAGTGTAAGAGAATA+AGG - Chr5:106457839-106457858 MsG0580030084.01.T01:CDS 25.0%
! TTCTCAGATAATAACTTACA+AGG - Chr5:106454990-106455009 MsG0580030084.01.T01:intron 25.0%
! TTGAGTAAAAGTAAAACACA+TGG - Chr5:106454592-106454611 MsG0580030084.01.T01:intron 25.0%
!! AAATTGTGGTTTTCATACAT+AGG + Chr5:106456961-106456980 None:intergenic 25.0%
!! AATTGTGGTTTTCATACATA+GGG + Chr5:106456960-106456979 None:intergenic 25.0%
!! ACTTCATAGGTGATAATTTT+TGG + Chr5:106457463-106457482 None:intergenic 25.0%
!! ATGTATGAAAACCACAATTT+TGG - Chr5:106456961-106456980 MsG0580030084.01.T01:intron 25.0%
!! ATTTCTTTAGTGTTGAGTAT+TGG + Chr5:106456389-106456408 None:intergenic 25.0%
!! CTTCATAGGTGATAATTTTT+GGG + Chr5:106457462-106457481 None:intergenic 25.0%
!! GCTTATAGTTATTTCCAATA+TGG + Chr5:106454423-106454442 None:intergenic 25.0%
!! GCTTTAATTTAAGTACACAA+AGG - Chr5:106454935-106454954 MsG0580030084.01.T01:intron 25.0%
!! TTTCAAATTTTAAGCTGTGT+CGG + Chr5:106457525-106457544 None:intergenic 25.0%
!!! AAGTGATTGTAAGTTGTTTT+AGG + Chr5:106456533-106456552 None:intergenic 25.0%
!!! ATGATGAGTTTTTGTTTTGA+AGG + Chr5:106457270-106457289 None:intergenic 25.0%
AAAAGGACCAAAAATGCAAA+GGG + Chr5:106457003-106457022 None:intergenic 30.0%
AATGTTTGGTATTGTAACAC+AGG + Chr5:106455405-106455424 None:intergenic 30.0%
ACAAGTTCCGGAAATAAAAT+GGG - Chr5:106454535-106454554 MsG0580030084.01.T01:intron 30.0%
ATACACAAGATGAGAAGAAA+AGG - Chr5:106457872-106457891 MsG0580030084.01.T01:CDS 30.0%
ATGAAGCAAAATGGGTAAAT+GGG - Chr5:106458078-106458097 MsG0580030084.01.T01:CDS 30.0%
ATGCATGATCGTAATTCAAA+TGG + Chr5:106455324-106455343 None:intergenic 30.0%
ATGCTGCTAATTGTAATCAT+AGG - Chr5:106457905-106457924 MsG0580030084.01.T01:CDS 30.0%
CCAATATCATTCATGTTTGT+CGG + Chr5:106454697-106454716 None:intergenic 30.0%
CTAATTGTAATCATAGGAAC+AGG - Chr5:106457911-106457930 MsG0580030084.01.T01:CDS 30.0%
GGAATAGGGTTAAATTAGAT+TGG - Chr5:106454194-106454213 MsG0580030084.01.T01:CDS 30.0%
GGTATCCTTAGAATTACTTA+TGG + Chr5:106456081-106456100 None:intergenic 30.0%
GTATTTGTGATGCAGATAAT+TGG - Chr5:106455434-106455453 MsG0580030084.01.T01:intron 30.0%
GTGTGCTAAATAAAATTAGG+AGG + Chr5:106456859-106456878 None:intergenic 30.0%
TACAAGTTCCGGAAATAAAA+TGG - Chr5:106454534-106454553 MsG0580030084.01.T01:intron 30.0%
TTACCAACATCAACAAAAGT+AGG - Chr5:106456629-106456648 MsG0580030084.01.T01:intron 30.0%
TTGTAACAATTCTTTCTCAC+TGG + Chr5:106456708-106456727 None:intergenic 30.0%
TTGTGATAATCTATGAAGCA+CGG + Chr5:106457644-106457663 None:intergenic 30.0%
! AAGATGATGATGAAGCAAAA+TGG - Chr5:106458069-106458088 MsG0580030084.01.T01:CDS 30.0%
! AGATGATGATGAAGCAAAAT+GGG - Chr5:106458070-106458089 MsG0580030084.01.T01:CDS 30.0%
! AGGAATTACTTTGATTTCCT+TGG + Chr5:106454338-106454357 None:intergenic 30.0%
! AGTGGTGATAAAGACATTTT+AGG - Chr5:106455687-106455706 MsG0580030084.01.T01:intron 30.0%
! CTTTTCAATTTTGTAGATGC+AGG + Chr5:106457374-106457393 None:intergenic 30.0%
! TACAAAGAAAGTATGGATTG+AGG + Chr5:106455929-106455948 None:intergenic 30.0%
!! ATCATTGATTTCATCGAATC+TGG + Chr5:106455557-106455576 None:intergenic 30.0%
!! ATTTTATTTCCGGAACTTGT+AGG + Chr5:106454535-106454554 None:intergenic 30.0%
!! GCATTGATTATAACTCTGAA+GGG - Chr5:106454287-106454306 MsG0580030084.01.T01:intron 30.0%
!! TGCATTGATTATAACTCTGA+AGG - Chr5:106454286-106454305 MsG0580030084.01.T01:intron 30.0%
!! TTAGTGTTGAGTATTGGTTT+GGG + Chr5:106456383-106456402 None:intergenic 30.0%
!! TTGGTTCTAATGTTAGGATA+TGG + Chr5:106455815-106455834 None:intergenic 30.0%
!! TTTAGTGTTGAGTATTGGTT+TGG + Chr5:106456384-106456403 None:intergenic 30.0%
!! TTTCCTACTTTTGTTGATGT+TGG + Chr5:106456635-106456654 None:intergenic 30.0%
!!! AGGATTTTGGTTCTAATGTT+AGG + Chr5:106455821-106455840 None:intergenic 30.0%
!!! TTACTTATGGTTTTGTTCGT+AGG + Chr5:106456068-106456087 None:intergenic 30.0%
!!! TTGTTTTGAAGGATGAAGAA+TGG + Chr5:106457259-106457278 None:intergenic 30.0%
AAAGGACCAAAAATGCAAAG+GGG + Chr5:106457002-106457021 None:intergenic 35.0%
AAATTGAGACCTCAAGTGAA+AGG - Chr5:106458044-106458063 MsG0580030084.01.T01:CDS 35.0%
AACCTCTAATGTGTTTCAAC+AGG + Chr5:106455277-106455296 None:intergenic 35.0%
AAGGAAGAAGATGAAAGAGA+CGG - Chr5:106458136-106458155 MsG0580030084.01.T01:CDS 35.0%
AAGGAAGAAGATGAAAGAGA+CGG + Chr5:106458155-106458136 None:intergenic 35.0%
AATGCTATAACATGTAGGGA+CGG - Chr5:106455869-106455888 MsG0580030084.01.T01:intron 35.0%
ACAGTGATAGAGATGATTTC+TGG + Chr5:106457428-106457447 None:intergenic 35.0%
AGTTGAATTTGCAGGAAGAA+AGG - Chr5:106458117-106458136 MsG0580030084.01.T01:CDS 35.0%
AGTTGAATTTGCAGGAAGAA+AGG + Chr5:106458136-106458117 None:intergenic 35.0%
ATATTAAGGAGCTCTACCTA+CGG - Chr5:106456110-106456129 MsG0580030084.01.T01:intron 35.0%
ATCCAAGAGCTTGATGTTAA+AGG - Chr5:106454958-106454977 MsG0580030084.01.T01:intron 35.0%
ATGAAGTTGAAGAAGAGTGA+AGG + Chr5:106454386-106454405 None:intergenic 35.0%
CAAAAGGACCAAAAATGCAA+AGG + Chr5:106457004-106457023 None:intergenic 35.0%
CACTGACCTTGTAATTACAT+TGG + Chr5:106457560-106457579 None:intergenic 35.0%
CAGTGATAGAGATGATTTCT+GGG + Chr5:106457427-106457446 None:intergenic 35.0%
CCGACAAACATGAATGATAT+TGG - Chr5:106454694-106454713 MsG0580030084.01.T01:intron 35.0%
CTAATGTTAGGATATGGTGT+GGG + Chr5:106455809-106455828 None:intergenic 35.0%
CTATTAAACAACCTCTCTTC+AGG + Chr5:106457787-106457806 None:intergenic 35.0%
CTGAAGAGAGGTTGTTTAAT+AGG - Chr5:106457785-106457804 MsG0580030084.01.T01:CDS 35.0%
CTTGGAGAAATTAGAAGAAG+TGG + Chr5:106457690-106457709 None:intergenic 35.0%
GATGAAGCAAAATGGGTAAA+TGG - Chr5:106458077-106458096 MsG0580030084.01.T01:CDS 35.0%
GTTTAATAGGTTTCGTAGAG+AGG - Chr5:106457798-106457817 MsG0580030084.01.T01:CDS 35.0%
TAATGTTAGGATATGGTGTG+GGG + Chr5:106455808-106455827 None:intergenic 35.0%
TAGCTAAATCCGTCATTCAT+TGG - Chr5:106456011-106456030 MsG0580030084.01.T01:intron 35.0%
TCACTCTTCTTCAACTTCAT+GGG - Chr5:106454386-106454405 MsG0580030084.01.T01:intron 35.0%
TCTAATGTTAGGATATGGTG+TGG + Chr5:106455810-106455829 None:intergenic 35.0%
TCTGTCTAAAAAGCAACTCT+TGG - Chr5:106454488-106454507 MsG0580030084.01.T01:intron 35.0%
TGATGATACGTTACATCGAA+CGG - Chr5:106456758-106456777 MsG0580030084.01.T01:intron 35.0%
TGCTTGAAAGTTGAATTTGC+AGG - Chr5:106458109-106458128 MsG0580030084.01.T01:CDS 35.0%
TGGAAGAAAGTTGAATTTGC+AGG + Chr5:106457239-106457258 None:intergenic 35.0%
TGTGGATCTTCATCAATAGT+GGG - Chr5:106456593-106456612 MsG0580030084.01.T01:intron 35.0%
TTCACTCTTCTTCAACTTCA+TGG - Chr5:106454385-106454404 MsG0580030084.01.T01:intron 35.0%
TTGATGTTGAGAGTGAAACT+TGG + Chr5:106457708-106457727 None:intergenic 35.0%
TTGTGGATCTTCATCAATAG+TGG - Chr5:106456592-106456611 MsG0580030084.01.T01:intron 35.0%
! ATGTTTTCTCTTCATGGAGA+TGG - Chr5:106454166-106454185 MsG0580030084.01.T01:CDS 35.0%
! CTTTCAAAACGTTGCGATTT+TGG - Chr5:106456932-106456951 MsG0580030084.01.T01:intron 35.0%
! TATACAACGATTTTGCATCC+TGG - Chr5:106455595-106455614 MsG0580030084.01.T01:intron 35.0%
! TCATCTTTTCCTTTCACTTG+AGG + Chr5:106458056-106458075 None:intergenic 35.0%
! TTTTAGCCCCTTTGCATTTT+TGG - Chr5:106456993-106457012 MsG0580030084.01.T01:intron 35.0%
!! ATATCAATTTTGGGTGAAGC+TGG - Chr5:106454796-106454815 MsG0580030084.01.T01:intron 35.0%
!! ATGAATGACGGATTTAGCTA+CGG + Chr5:106456011-106456030 None:intergenic 35.0%
!! GTTGATGTTGGTAATAGCTT+TGG + Chr5:106456623-106456642 None:intergenic 35.0%
!! TATCAATTTTGGGTGAAGCT+GGG - Chr5:106454797-106454816 MsG0580030084.01.T01:intron 35.0%
!! TCCTTTTGGTCAATTTTGAC+CGG - Chr5:106457016-106457035 MsG0580030084.01.T01:intron 35.0%
!!! ATCGCAACGTTTTGAAAGTT+AGG + Chr5:106456930-106456949 None:intergenic 35.0%
!!! ATGGTTTTGTTCGTAGGTAA+AGG + Chr5:106456062-106456081 None:intergenic 35.0%
!!! CTTTGCATTTTTGGTCCTTT+TGG - Chr5:106457002-106457021 MsG0580030084.01.T01:intron 35.0%
!!! TCGCAACGTTTTGAAAGTTA+GGG + Chr5:106456929-106456948 None:intergenic 35.0%
AAGCAAAATGGGTAAATGGG+TGG - Chr5:106458081-106458100 MsG0580030084.01.T01:CDS 40.0%
ACCGGTCAAAATTGACCAAA+AGG + Chr5:106457020-106457039 None:intergenic 40.0%
AGCCATTTGCCAATGAATGA+CGG + Chr5:106456023-106456042 None:intergenic 40.0%
AGCCGAAATCCATCACTATA+GGG - Chr5:106455978-106455997 MsG0580030084.01.T01:intron 40.0%
AGCCTGTTGAAACACATTAG+AGG - Chr5:106455272-106455291 MsG0580030084.01.T01:intron 40.0%
AGTTCCGGAAATAAAATGGG+CGG - Chr5:106454538-106454557 MsG0580030084.01.T01:intron 40.0%
AGTTGAAGAAGAGTGAAGGA+AGG + Chr5:106454382-106454401 None:intergenic 40.0%
ATCCGTCATTCATTGGCAAA+TGG - Chr5:106456018-106456037 MsG0580030084.01.T01:intron 40.0%
ATGCAAAGGGGCTAAAACTT+AGG + Chr5:106456990-106457009 None:intergenic 40.0%
CAAACAAGATCAACGATGTG+TGG - Chr5:106456725-106456744 MsG0580030084.01.T01:intron 40.0%
CAAGAGCTTGATGTTAAAGG+AGG - Chr5:106454961-106454980 MsG0580030084.01.T01:intron 40.0%
CTCCTTTAACATCAAGCTCT+TGG + Chr5:106454963-106454982 None:intergenic 40.0%
CTTCTTCAACTTCATGGGTT+TGG - Chr5:106454391-106454410 MsG0580030084.01.T01:intron 40.0%
GAAGAAGTGGCGTCTAATTA+CGG + Chr5:106457677-106457696 None:intergenic 40.0%
GATGATACGTTACATCGAAC+GGG - Chr5:106456759-106456778 MsG0580030084.01.T01:intron 40.0%
GCTGCAATACATCAAGAAAG+TGG - Chr5:106455669-106455688 MsG0580030084.01.T01:intron 40.0%
GGATATTAGCCCTATAGTGA+TGG + Chr5:106455990-106456009 None:intergenic 40.0%
GTAAATGAGACATGCACATG+CGG + Chr5:106455200-106455219 None:intergenic 40.0%
GTAGATATGCCTACAAGTTC+CGG - Chr5:106454523-106454542 MsG0580030084.01.T01:intron 40.0%
GTTAAATGGGTCAATTGCGT+TGG - Chr5:106454741-106454760 MsG0580030084.01.T01:intron 40.0%
TCACCTATGAAGTACGGATA+CGG - Chr5:106457470-106457489 MsG0580030084.01.T01:intron 40.0%
TGCAAAGGGGCTAAAACTTA+GGG + Chr5:106456989-106457008 None:intergenic 40.0%
TTCTACAACCTACAACACGT+GGG - Chr5:106454459-106454478 MsG0580030084.01.T01:intron 40.0%
TTGAGTTACATGAGATCGAC+AGG - Chr5:106454851-106454870 MsG0580030084.01.T01:intron 40.0%
! AAGGAAGGTTGAGAAGCATA+AGG + Chr5:106454367-106454386 None:intergenic 40.0%
! ACTTTGATTTCCTTGGTAGC+TGG + Chr5:106454331-106454350 None:intergenic 40.0%
! ATGGAGATGGATTCAGGAAT+AGG - Chr5:106454179-106454198 MsG0580030084.01.T01:CDS 40.0%
! GGGTTTGGTTATGACCATAT+TGG - Chr5:106454406-106454425 MsG0580030084.01.T01:intron 40.0%
! TGAGAAGCATAAGGACTAGA+AGG + Chr5:106454358-106454377 None:intergenic 40.0%
! TGGAGATGGATTCAGGAATA+GGG - Chr5:106454180-106454199 MsG0580030084.01.T01:CDS 40.0%
!! AGCCCTATAGTGATGGATTT+CGG + Chr5:106455983-106456002 None:intergenic 40.0%
!! ATGACCGCCCATTTTATTTC+CGG + Chr5:106454545-106454564 None:intergenic 40.0%
!! ATTGGTTTGGGTGTGAATAC+AGG + Chr5:106456371-106456390 None:intergenic 40.0%
!!! CAACGTTTTGAAAGTTAGGG+GGG + Chr5:106456926-106456945 None:intergenic 40.0%
!!! CGCAACGTTTTGAAAGTTAG+GGG + Chr5:106456928-106456947 None:intergenic 40.0%
!!! GCAACGTTTTGAAAGTTAGG+GGG + Chr5:106456927-106456946 None:intergenic 40.0%
AACTTAGGGGGCCAAAATTG+TGG + Chr5:106456975-106456994 None:intergenic 45.0%
AAGATGATGAGCCTGAAGAG+AGG - Chr5:106457773-106457792 MsG0580030084.01.T01:CDS 45.0%
AAGCTGGGATGAAGGAATCA+TGG - Chr5:106454812-106454831 MsG0580030084.01.T01:intron 45.0%
ACATGGATGGAGTGTGTCAT+TGG - Chr5:106454569-106454588 MsG0580030084.01.T01:intron 45.0%
ATGAAGTACGGATACGGACA+CGG - Chr5:106457476-106457495 MsG0580030084.01.T01:intron 45.0%
ATTGTGGAATCCAGCTACCA+AGG - Chr5:106454318-106454337 MsG0580030084.01.T01:intron 45.0%
CAAAATGGGTAAATGGGTGG+TGG - Chr5:106458084-106458103 MsG0580030084.01.T01:CDS 45.0%
CAAAGGGGCTAAAACTTAGG+GGG + Chr5:106456987-106457006 None:intergenic 45.0%
CAGCCGAAATCCATCACTAT+AGG - Chr5:106455977-106455996 MsG0580030084.01.T01:intron 45.0%
CCAATTGGAGTGGGTAAGAA+TGG - Chr5:106454874-106454893 MsG0580030084.01.T01:intron 45.0%
CCATTCTTACCCACTCCAAT+TGG + Chr5:106454877-106454896 None:intergenic 45.0%
CGATCCTCGCTGAATAGATT+CGG + Chr5:106454220-106454239 None:intergenic 45.0%
CTGAAGGGAGAGTTGTATTG+TGG - Chr5:106454302-106454321 MsG0580030084.01.T01:intron 45.0%
CTTCTACAACCTACAACACG+TGG - Chr5:106454458-106454477 MsG0580030084.01.T01:intron 45.0%
GAAGAAGATGAAAGAGACGG+TGG - Chr5:106458139-106458158 MsG0580030084.01.T01:CDS 45.0%
GAAGAAGATGAAAGAGACGG+TGG + Chr5:106458158-106458139 None:intergenic 45.0%
GAATATCTCCCACGTGTTGT+AGG + Chr5:106454470-106454489 None:intergenic 45.0%
GCAAAGGGGCTAAAACTTAG+GGG + Chr5:106456988-106457007 None:intergenic 45.0%
GGATCTGATGAAATAGGAGG+AGG + Chr5:106457185-106457204 None:intergenic 45.0%
GGTGGATCTGATGAAATAGG+AGG + Chr5:106457188-106457207 None:intergenic 45.0%
TGTCCGTATCCGTACTTCAT+AGG + Chr5:106457476-106457495 None:intergenic 45.0%
TTACAAGGTCAGTGTCGTGT+CGG - Chr5:106457566-106457585 MsG0580030084.01.T01:CDS 45.0%
TTCGAACATTCACCGCAAAG+AGG - Chr5:106456815-106456834 MsG0580030084.01.T01:intron 45.0%
! CTCTTCATGGAGATGGATTC+AGG - Chr5:106454173-106454192 MsG0580030084.01.T01:CDS 45.0%
! TTTGCATCCTGGTGTTTTCC+CGG - Chr5:106455606-106455625 MsG0580030084.01.T01:intron 45.0%
!! GGTGGTGGATCTGATGAAAT+AGG + Chr5:106457191-106457210 None:intergenic 45.0%
AATGGGCGGTCATGTGTACA+TGG - Chr5:106454552-106454571 MsG0580030084.01.T01:intron 50.0%
AGCTGTACCACAGTGACTTC+CGG + Chr5:106455628-106455647 None:intergenic 50.0%
AGGAGCTCTACCTACGGTTT+CGG - Chr5:106456116-106456135 MsG0580030084.01.T01:intron 50.0%
AGGAGGAGGTAGAGAGATGA+AGG + Chr5:106457171-106457190 None:intergenic 50.0%
AGGAGGTAGAGAGATGAAGG+AGG + Chr5:106457168-106457187 None:intergenic 50.0%
AGGTAGAGAGATGAAGGAGG+CGG + Chr5:106457165-106457184 None:intergenic 50.0%
ATCGACAGGCCAATTGGAGT+GGG - Chr5:106454865-106454884 MsG0580030084.01.T01:intron 50.0%
CATGAGATCGACAGGCCAAT+TGG - Chr5:106454859-106454878 MsG0580030084.01.T01:intron 50.0%
CATTCACCGCAAAGAGGTCT+CGG - Chr5:106456821-106456840 MsG0580030084.01.T01:intron 50.0%
GAAGATGAAAGAGACGGTGG+TGG - Chr5:106458142-106458161 MsG0580030084.01.T01:CDS 50.0%
GAAGATGAAAGAGACGGTGG+TGG + Chr5:106458161-106458142 None:intergenic 50.0%
GGATCTGATGAAAGAGGAGG+AGG - Chr5:106458163-106458182 MsG0580030084.01.T01:CDS 50.0%
GGTGGATCTGATGAAAGAGG+AGG - Chr5:106458160-106458179 MsG0580030084.01.T01:CDS 50.0%
TATGAAGCACGGACACTCCT+CGG + Chr5:106457633-106457652 None:intergenic 50.0%
TGAAGTACGGATACGGACAC+GGG - Chr5:106457477-106457496 MsG0580030084.01.T01:intron 50.0%
TGGATAATCTGTGCGCGAAG+AGG - Chr5:106457993-106458012 MsG0580030084.01.T01:CDS 50.0%
TTGGCCGAATCTATTCAGCG+AGG - Chr5:106454213-106454232 MsG0580030084.01.T01:CDS 50.0%
TTTGGGTGAAGCTGGGATGA+AGG - Chr5:106454804-106454823 MsG0580030084.01.T01:intron 50.0%
! TGTTTTCCCGGAAGTCACTG+TGG - Chr5:106455618-106455637 MsG0580030084.01.T01:intron 50.0%
!! GGTGGTGGATCTGATGAAAG+AGG - Chr5:106458157-106458176 MsG0580030084.01.T01:CDS 50.0%
ACCGCAAAGAGGTCTCGGAA+AGG - Chr5:106456826-106456845 MsG0580030084.01.T01:intron 55.0%
AGGAGGAGGCAGAGAGATGA+AGG - Chr5:106458177-106458196 MsG0580030084.01.T01:CDS 55.0%
AGGAGGCAGAGAGATGAAGG+AGG - Chr5:106458180-106458199 MsG0580030084.01.T01:CDS 55.0%
AGGCAGAGAGATGAAGGAGG+CGG - Chr5:106458183-106458202 MsG0580030084.01.T01:CDS 55.0%
CCCTTTCCGAGACCTCTTTG+CGG + Chr5:106456830-106456849 None:intergenic 55.0%
CCGCAAAGAGGTCTCGGAAA+GGG - Chr5:106456827-106456846 MsG0580030084.01.T01:intron 55.0%
GATCGACAGGCCAATTGGAG+TGG - Chr5:106454864-106454883 MsG0580030084.01.T01:intron 55.0%
GCTGTACCACAGTGACTTCC+GGG + Chr5:106455627-106455646 None:intergenic 55.0%
GGCGGTCATGTGTACATGGA+TGG - Chr5:106454556-106454575 MsG0580030084.01.T01:intron 55.0%
GTGACTTCCGGGAAAACACC+AGG + Chr5:106455616-106455635 None:intergenic 55.0%
TAGAGAGATGAAGGAGGCGG+TGG + Chr5:106457162-106457181 None:intergenic 55.0%
TGTTACCATCCGGAGAGCCT+GGG - Chr5:106455892-106455911 MsG0580030084.01.T01:intron 55.0%
TTAGGGACAGCCGAAACCGT+AGG + Chr5:106456129-106456148 None:intergenic 55.0%
TTGACCGGTCAAAGCCTACG+TGG - Chr5:106457031-106457050 MsG0580030084.01.T01:intron 55.0%
! CATGCCACGTAGGCTTTGAC+CGG + Chr5:106457038-106457057 None:intergenic 55.0%
!! GTAGGGACGGTGTTACCATC+CGG - Chr5:106455882-106455901 MsG0580030084.01.T01:intron 55.0%
AAGCATGTGCCCAGGCTCTC+CGG + Chr5:106455904-106455923 None:intergenic 60.0%
ACACACGTGGCATGCCACGT+AGG + Chr5:106457048-106457067 None:intergenic 60.0%
ACACGACACGTGTCCGACAC+CGG - Chr5:106457595-106457614 MsG0580030084.01.T01:CDS 60.0%
CAGAGAGATGAAGGAGGCGG+TGG - Chr5:106458186-106458205 MsG0580030084.01.T01:CDS 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + Chr5:106457611-106457630 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+AGG + Chr5:106457627-106457646 None:intergenic 60.0%
GTGTTACCATCCGGAGAGCC+TGG - Chr5:106455891-106455910 MsG0580030084.01.T01:intron 60.0%
TACGGACACGGGACACGACA+CGG - Chr5:106457488-106457507 MsG0580030084.01.T01:intron 60.0%
TTGAGGCCAAGCATGTGCCC+AGG + Chr5:106455912-106455931 None:intergenic 60.0%
! GGTCAGTGTCGTGTCGGTGT+CGG - Chr5:106457572-106457591 MsG0580030084.01.T01:CDS 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG + Chr5:106457617-106457636 None:intergenic 60.0%
ACCGGGACACGCCTAATCCG+AGG - Chr5:106457613-106457632 MsG0580030084.01.T01:CDS 65.0%
ATGTGCCCAGGCTCTCCGGA+TGG + Chr5:106455900-106455919 None:intergenic 65.0%
CACGACACGTGTCCGACACC+GGG - Chr5:106457596-106457615 MsG0580030084.01.T01:CDS 65.0%
GGAGAGCCTGGGCACATGCT+TGG - Chr5:106455903-106455922 MsG0580030084.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 106454166 106458216 106454166 ID=MsG0580030084.01;Name=MsG0580030084.01
Chr5 mRNA 106454166 106458216 106454166 ID=MsG0580030084.01.T01;Parent=MsG0580030084.01;Name=MsG0580030084.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.5|0|0.5|2|0|268
Chr5 exon 106457496 106458216 106457496 ID=MsG0580030084.01.T01:exon:17230;Parent=MsG0580030084.01.T01
Chr5 exon 106454166 106454251 106454166 ID=MsG0580030084.01.T01:exon:17229;Parent=MsG0580030084.01.T01
Chr5 CDS 106457496 106458216 106457496 ID=MsG0580030084.01.T01:cds;Parent=MsG0580030084.01.T01
Chr5 CDS 106454166 106454251 106454166 ID=MsG0580030084.01.T01:cds;Parent=MsG0580030084.01.T01
Gene Sequence

>MsG0580030084.01.T01

ATGTTTTCTCTTCATGGAGATGGATTCAGGAATAGGGTTAAATTAGATTGGCCGAATCTATTCAGCGAGGATCGACTTTATTTTAAAATTTGTGGTTATACTAGTGTCAATGACATTATCTGCATTGATTATAACTCTGAAGGGAGAGTTGTATTGTGGAATCCAGCTACCAAGGAAATCAAAGTAATTCCTTCTAGTCCTTATGCTTCTCAACCTTCCTTCACTCTTCTTCAACTTCATGGGTTTGGTTATGACCATATTGGAAATAACTATAAGCTGATTCGACATGTTTCTTCTACAACCTACAACACGTGGGAGATATTCTGTCTAAAAAGCAACTCTTGGAGAAAGCTTGATGTAGATATGCCTACAAGTTCCGGAAATAAAATGGGCGGTCATGTGTACATGGATGGAGTGTGTCATTGGTTGAGTAAAAGTAAAACACATGGTTATCGATATGACACATACAATGAAAAATATCTCGTGTCATTTAACTTGACAACTGAGATGTTTGTTACAACATCTATACCGACAAACATGAATGATATTGGTTATAGATACTTATACTTAGCTGTGTTAAATGGGTCAATTGCGTTGGTTTCAAATTTTGCAGATGCAACTACTTTTGACATATCAATTTTGGGTGAAGCTGGGATGAAGGAATCATGGACAAAACTCTTCACTATTGAGTTACATGAGATCGACAGGCCAATTGGAGTGGGAAGAAAGGAAGAAGATGAAAGAGACGGTGGTGGATCTGATGAAAGAGGAGGAGGCAGAGAGATGAAGGAGGCGGTGGTGAACTGA
Protein sequence

>MsG0580030084.01.T01

MFSLHGDGFRNRVKLDWPNLFSEDRLYFKICGYTSVNDIICIDYNSEGRVVLWNPATKEIKVIPSSPYASQPSFTLLQLHGFGYDHIGNNYKLIRHVSSTTYNTWEIFCLKSNSWRKLDVDMPTSSGNKMGGHVYMDGVCHWLSKSKTHGYRYDTYNEKYLVSFNLTTEMFVTTSIPTNMNDIGYRYLYLAVLNGSIALVSNFADATTFDISILGEAGMKESWTKLFTIELHEIDRPIGVGRKEEDERDGGGSDERGGGREMKEAVVN*