AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035660.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035660.01.T01 MTR_6g086825 88.172 465 51 2 1 465 1 461 0.0 827
MsG0680035660.01.T01 MTR_6g478230 74.648 426 74 4 55 465 2 408 0.0 635
MsG0680035660.01.T01 MTR_6g079790 72.903 310 82 1 158 465 1 310 3.59e-171 483
MsG0680035660.01.T01 MTR_6g079810 54.737 475 171 13 9 462 10 461 6.53e-157 453
MsG0680035660.01.T01 MTR_0134s0060 57.212 416 151 10 66 463 5 411 9.77e-147 425
MsG0680035660.01.T01 MTR_0054s0090 55.635 417 159 9 61 465 5 407 1.37e-146 424
MsG0680035660.01.T01 MTR_4g028510 56.174 413 157 9 61 463 3 401 9.99e-145 422
MsG0680035660.01.T01 MTR_6g090180 53.708 445 173 11 29 461 12 435 6.99e-143 416
MsG0680035660.01.T01 MTR_0054s0100 54.306 418 165 9 61 465 5 409 7.83e-143 415
MsG0680035660.01.T01 MTR_6g079770 54.779 429 157 11 55 462 3 415 1.20e-141 412
MsG0680035660.01.T01 MTR_4g028680 54.348 414 165 10 61 465 3 401 9.98e-138 402
MsG0680035660.01.T01 MTR_4g028660 53.922 408 167 8 61 461 3 396 1.34e-135 396
MsG0680035660.01.T01 MTR_4g027450 53.922 408 167 8 61 461 3 396 1.34e-135 396
MsG0680035660.01.T01 MTR_6g080680 53.623 414 155 8 56 458 2 389 3.51e-134 392
MsG0680035660.01.T01 MTR_4g130330 53.713 404 161 10 70 463 3 390 4.87e-132 387
MsG0680035660.01.T01 MTR_6g078010 56.303 357 121 8 111 459 1 330 1.14e-125 369
MsG0680035660.01.T01 MTR_4g028750 51.646 395 157 12 61 442 3 376 1.07e-121 361
MsG0680035660.01.T01 MTR_6g090250 50.868 403 155 12 92 461 29 421 1.08e-121 362
MsG0680035660.01.T01 MTR_6g087620 58.065 310 97 4 147 454 1 279 1.30e-121 356
MsG0680035660.01.T01 MTR_0129s0070 48.762 404 185 8 67 465 11 397 6.58e-116 346
MsG0680035660.01.T01 MTR_0129s0120 48.020 404 188 8 67 465 11 397 5.58e-111 333
MsG0680035660.01.T01 MTR_5g097680 45.000 440 197 12 56 464 2 427 2.05e-108 328
MsG0680035660.01.T01 MTR_2g038680 45.070 426 198 13 57 463 2 410 8.61e-108 326
MsG0680035660.01.T01 MTR_8g063440 46.699 409 186 11 63 465 2 384 2.17e-107 324
MsG0680035660.01.T01 MTR_5g097220 44.928 414 185 9 74 463 13 407 2.41e-107 325
MsG0680035660.01.T01 MTR_0129s0050 46.062 419 187 11 67 464 8 408 2.60e-105 319
MsG0680035660.01.T01 MTR_6g461660 45.755 424 184 10 54 461 4 397 4.32e-104 316
MsG0680035660.01.T01 MTR_4g117550 46.059 406 170 12 67 465 11 374 5.35e-104 315
MsG0680035660.01.T01 MTR_5g097330 45.477 409 186 12 73 464 15 403 2.27e-102 311
MsG0680035660.01.T01 MTR_2g022000 45.390 423 195 14 61 461 4 412 8.42e-102 311
MsG0680035660.01.T01 MTR_5g069390 41.452 427 201 9 62 462 12 415 1.88e-101 312
MsG0680035660.01.T01 MTR_2g021800 43.925 428 199 13 61 463 4 415 1.02e-98 303
MsG0680035660.01.T01 MTR_2g021950 44.717 407 198 11 62 460 6 393 2.44e-98 301
MsG0680035660.01.T01 MTR_5g059430 41.935 434 200 14 61 462 11 424 1.31e-97 300
MsG0680035660.01.T01 MTR_5g037680 43.735 407 181 10 70 458 4 380 1.82e-97 301
MsG0680035660.01.T01 MTR_7g104710 53.251 323 108 7 60 379 4 286 9.11e-96 291
MsG0680035660.01.T01 MTR_7g017130 43.873 408 209 10 61 464 6 397 9.97e-96 294
MsG0680035660.01.T01 MTR_8g064890 44.928 414 188 12 62 464 4 388 1.18e-95 294
MsG0680035660.01.T01 MTR_2g021770 40.678 413 208 9 74 465 12 408 9.83e-95 292
MsG0680035660.01.T01 MTR_7g017170 42.143 420 211 11 61 464 6 409 2.04e-93 289
MsG0680035660.01.T01 MTR_4g102410 43.705 421 207 15 55 462 45 448 2.30e-93 290
MsG0680035660.01.T01 MTR_5g092850 43.437 419 197 17 61 461 3 399 3.00e-93 288
MsG0680035660.01.T01 MTR_5g097350 44.501 391 174 11 83 461 25 384 8.04e-93 286
MsG0680035660.01.T01 MTR_8g012090 45.361 388 141 9 59 433 5 334 9.06e-93 285
MsG0680035660.01.T01 MTR_7g023800 47.059 357 132 7 113 461 1 308 5.97e-91 279
MsG0680035660.01.T01 MTR_5g074850 45.432 405 172 18 60 441 23 401 6.50e-91 296
MsG0680035660.01.T01 MTR_4g055820 46.429 364 162 9 73 420 13 359 3.73e-90 279
MsG0680035660.01.T01 MTR_2g104340 43.902 410 186 14 73 464 13 396 4.71e-89 277
MsG0680035660.01.T01 MTR_8g464770 42.532 395 198 9 69 460 8 376 5.04e-89 276
MsG0680035660.01.T01 MTR_0831s0010 40.371 431 217 12 42 463 21 420 1.23e-88 277
MsG0680035660.01.T01 MTR_5g096910 42.824 425 191 16 58 463 1 392 8.24e-88 274
MsG0680035660.01.T01 MTR_8g033140 38.776 441 207 14 61 465 6 419 1.36e-86 271
MsG0680035660.01.T01 MTR_8g041270 40.888 428 208 12 60 464 1 406 2.21e-86 271
MsG0680035660.01.T01 MTR_2g065860 40.196 408 213 9 66 465 5 389 2.24e-86 270
MsG0680035660.01.T01 MTR_3g011120 43.367 392 184 14 69 453 9 369 2.28e-86 269
MsG0680035660.01.T01 MTR_7g069550 42.373 413 182 15 69 456 10 391 2.85e-86 270
MsG0680035660.01.T01 MTR_6g090260 64.039 203 64 3 262 461 65 261 3.17e-86 265
MsG0680035660.01.T01 MTR_6g090260 56.180 89 36 2 54 141 2 88 1.42e-20 91.7
MsG0680035660.01.T01 MTR_2g104280 41.589 428 202 13 59 464 4 405 4.91e-86 270
MsG0680035660.01.T01 MTR_2g034700 41.294 402 194 11 67 461 7 373 3.22e-85 266
MsG0680035660.01.T01 MTR_5g096630 42.092 411 204 11 74 464 18 414 3.41e-85 268
MsG0680035660.01.T01 MTR_2g066200 40.723 415 201 14 66 465 5 389 4.49e-85 266
MsG0680035660.01.T01 MTR_5g092860 44.764 382 147 15 92 451 20 359 1.00e-84 265
MsG0680035660.01.T01 MTR_5g075370 43.719 398 174 18 70 441 4 377 3.67e-84 275
MsG0680035660.01.T01 MTR_8g046310 40.777 412 194 12 60 460 2 374 4.08e-84 264
MsG0680035660.01.T01 MTR_7g079640 41.500 400 184 14 73 461 12 372 3.90e-83 261
MsG0680035660.01.T01 MTR_2g065840 39.655 406 206 10 71 463 9 388 5.56e-83 261
MsG0680035660.01.T01 MTR_4g014370 40.046 437 200 15 60 463 1 408 5.90e-83 262
MsG0680035660.01.T01 MTR_1g007410 42.680 403 191 14 71 456 19 398 6.86e-83 261
MsG0680035660.01.T01 MTR_7g017040 41.320 409 215 10 65 465 8 399 1.54e-82 260
MsG0680035660.01.T01 MTR_1g007450 43.182 396 196 13 66 450 5 382 1.50e-81 258
MsG0680035660.01.T01 MTR_7g111700 40.876 411 171 11 71 465 12 366 1.77e-81 256
MsG0680035660.01.T01 MTR_5g064700 42.480 379 180 14 113 464 1 368 3.21e-81 256
MsG0680035660.01.T01 MTR_2g066170 40.389 411 206 13 66 465 5 387 4.10e-81 256
MsG0680035660.01.T01 MTR_8g467670 40.199 403 204 12 69 465 9 380 4.13e-81 256
MsG0680035660.01.T01 MTR_5g091140 43.358 399 172 14 60 443 37 396 2.27e-78 250
MsG0680035660.01.T01 MTR_8g033090 38.182 440 206 14 62 464 2 412 7.33e-77 246
MsG0680035660.01.T01 MTR_1g053510 37.587 431 210 15 60 460 1 402 1.91e-76 245
MsG0680035660.01.T01 MTR_2g064950 41.191 403 187 17 73 455 9 381 2.32e-76 244
MsG0680035660.01.T01 MTR_8g046200 37.556 450 197 15 61 460 3 418 2.65e-76 245
MsG0680035660.01.T01 MTR_5g076490 43.432 373 155 14 111 464 1 336 4.28e-76 241
MsG0680035660.01.T01 MTR_5g024260 39.623 424 195 16 41 443 2 385 3.08e-75 242
MsG0680035660.01.T01 MTR_2g066150 37.811 402 190 11 73 465 11 361 2.71e-74 238
MsG0680035660.01.T01 MTR_8g018110 36.300 427 215 12 62 463 2 396 6.10e-74 238
MsG0680035660.01.T01 MTR_5g072060 41.558 385 165 12 73 439 5 347 9.26e-73 241
MsG0680035660.01.T01 MTR_8g046220 37.104 442 195 14 60 460 3 402 1.36e-72 235
MsG0680035660.01.T01 MTR_8g013000 39.500 400 195 13 73 451 9 382 7.30e-72 233
MsG0680035660.01.T01 MTR_8g032980 37.444 446 196 15 62 458 4 415 1.34e-71 233
MsG0680035660.01.T01 MTR_8g039500 39.894 376 184 12 66 433 5 346 1.77e-71 230
MsG0680035660.01.T01 MTR_8g064790 37.561 410 178 12 60 464 1 337 1.87e-71 229
MsG0680035660.01.T01 MTR_1g098180 38.152 422 184 14 61 465 6 367 8.03e-71 229
MsG0680035660.01.T01 MTR_4g007940 39.155 355 172 13 124 457 4 335 6.15e-70 226
MsG0680035660.01.T01 MTR_8g033110 36.219 439 219 13 62 464 2 415 2.90e-69 226
MsG0680035660.01.T01 MTR_6g070880 51.894 264 97 10 44 291 10 259 5.88e-69 221
MsG0680035660.01.T01 MTR_6g071420 51.894 264 97 10 44 291 10 259 5.88e-69 221
MsG0680035660.01.T01 MTR_5g074800 40.217 368 164 13 113 456 1 336 3.30e-68 221
MsG0680035660.01.T01 MTR_5g043605 34.988 423 186 10 46 464 2 339 1.67e-67 220
MsG0680035660.01.T01 MTR_8g063330 39.295 369 190 11 66 422 5 351 2.28e-67 223
MsG0680035660.01.T01 MTR_5g022850 36.585 410 173 11 72 464 14 353 2.46e-65 214
MsG0680035660.01.T01 MTR_8g036970 38.211 369 156 9 78 442 2 302 8.04e-64 211
MsG0680035660.01.T01 MTR_6g004450 49.145 234 103 6 232 463 49 268 1.08e-63 207
MsG0680035660.01.T01 MTR_1g007430 40.058 342 167 9 85 417 7 319 5.25e-63 207
MsG0680035660.01.T01 MTR_4g014370 36.627 415 162 14 60 463 12 336 8.95e-63 207
MsG0680035660.01.T01 MTR_7g016930 40.476 336 154 10 66 395 9 304 2.36e-62 206
MsG0680035660.01.T01 MTR_6g079730 65.972 144 49 0 318 461 4 147 1.28e-60 195
MsG0680035660.01.T01 MTR_2g021920 47.303 241 105 5 233 460 38 269 8.07e-60 197
MsG0680035660.01.T01 MTR_5g094350 43.003 293 125 8 72 349 11 276 1.65e-59 197
MsG0680035660.01.T01 MTR_3g018750 45.418 251 109 11 231 464 2 241 6.44e-58 191
MsG0680035660.01.T01 MTR_5g096900 41.643 353 137 14 63 387 2 313 1.48e-57 193
MsG0680035660.01.T01 MTR_5g097850 46.610 236 87 8 236 463 40 244 2.02e-56 187
MsG0680035660.01.T01 MTR_5g023970 52.792 197 83 4 269 464 9 196 1.43e-55 184
MsG0680035660.01.T01 MTR_5g068490 38.065 310 153 11 156 465 8 278 4.23e-55 185
MsG0680035660.01.T01 MTR_8g063370 33.663 404 218 16 67 456 17 384 6.10e-54 186
MsG0680035660.01.T01 MTR_5g086590 43.443 244 108 7 196 436 15 231 8.11e-54 181
MsG0680035660.01.T01 MTR_6g465360 46.502 243 104 9 55 279 47 281 8.57e-53 179
MsG0680035660.01.T01 MTR_8g063310 34.250 400 218 17 72 456 20 389 2.13e-51 179
MsG0680035660.01.T01 MTR_8g063350 33.333 402 176 14 70 454 10 336 5.01e-50 174
MsG0680035660.01.T01 MTR_6g009350 45.274 201 100 5 228 427 4 195 1.50e-47 162
MsG0680035660.01.T01 MTR_8g033000 33.590 390 196 14 111 464 1 363 1.74e-47 167
MsG0680035660.01.T01 MTR_1g050312 35.220 318 152 9 147 456 16 287 3.94e-47 164
MsG0680035660.01.T01 MTR_5g097820 38.258 264 140 6 60 313 8 258 5.60e-47 163
MsG0680035660.01.T01 MTR_8g035690 37.627 295 131 11 200 463 30 302 5.08e-44 157
MsG0680035660.01.T01 MTR_1g076810 42.400 250 121 9 62 303 7 241 5.27e-44 164
MsG0680035660.01.T01 MTR_4g016000 41.150 226 92 8 199 417 2 193 7.31e-42 148
MsG0680035660.01.T01 MTR_5g066420 47.712 153 75 2 302 453 1 149 2.11e-41 145
MsG0680035660.01.T01 MTR_1g115205 37.218 266 101 9 64 310 19 237 3.16e-41 148
MsG0680035660.01.T01 MTR_5g098950 36.397 272 119 8 159 419 43 271 5.42e-40 145
MsG0680035660.01.T01 MTR_7g019250 37.295 244 105 7 208 440 206 412 1.03e-39 149
MsG0680035660.01.T01 MTR_7g017150 46.154 195 95 4 271 464 82 267 6.72e-39 142
MsG0680035660.01.T01 MTR_5g096920 48.148 162 71 4 302 462 1 150 8.30e-39 138
MsG0680035660.01.T01 MTR_7g017120 45.641 195 96 4 271 464 81 266 2.69e-38 140
MsG0680035660.01.T01 MTR_3g030620 45.506 178 82 5 291 462 12 180 6.35e-38 136
MsG0680035660.01.T01 MTR_2g104260 37.143 280 143 6 74 338 14 275 6.84e-38 139
MsG0680035660.01.T01 MTR_4g094400 58.929 112 30 2 298 398 6 112 1.84e-36 131
MsG0680035660.01.T01 MTR_5g097660 55.652 115 50 1 348 461 3 117 2.46e-36 130
MsG0680035660.01.T01 MTR_5g037190 37.023 262 126 8 61 314 4 234 5.76e-36 134
MsG0680035660.01.T01 MTR_1g050308 36.614 254 128 11 50 293 11 241 7.58e-33 127
MsG0680035660.01.T01 MTR_1g050308 46.364 110 54 2 358 465 242 348 1.92e-22 98.6
MsG0680035660.01.T01 MTR_8g073570 43.386 189 82 8 60 243 2 170 3.98e-32 120
MsG0680035660.01.T01 MTR_5g097540 46.667 150 63 4 271 419 97 230 4.86e-32 124
MsG0680035660.01.T01 MTR_3g019290 35.455 220 95 6 62 277 2 178 3.59e-31 118
MsG0680035660.01.T01 MTR_2g426070 28.646 384 206 20 82 437 14 357 1.33e-29 120
MsG0680035660.01.T01 MTR_5g036250 57.732 97 40 1 360 456 8 103 2.08e-29 114
MsG0680035660.01.T01 MTR_5g086780 50.862 116 57 0 325 440 113 228 2.88e-29 115
MsG0680035660.01.T01 MTR_5g086780 42.857 119 46 5 61 179 4 100 3.28e-12 66.6
MsG0680035660.01.T01 MTR_5g097650 40.491 163 85 2 54 215 2 153 6.93e-29 111
MsG0680035660.01.T01 MTR_5g091150 37.811 201 68 7 173 370 38 184 7.57e-27 107
MsG0680035660.01.T01 MTR_2g022020 44.915 118 63 1 343 460 1 116 1.23e-26 104
MsG0680035660.01.T01 MTR_4g133170 27.568 370 210 16 77 434 7 330 1.51e-26 111
MsG0680035660.01.T01 MTR_6g087660 58.654 104 39 2 61 162 5 106 3.77e-26 105
MsG0680035660.01.T01 MTR_2g031720 29.243 383 217 17 69 437 1 343 5.67e-26 109
MsG0680035660.01.T01 MTR_2g028140 28.312 385 223 18 77 436 8 364 1.53e-25 108
MsG0680035660.01.T01 MTR_7g101200 33.096 281 123 14 151 421 3 228 7.69e-25 102
MsG0680035660.01.T01 MTR_1g047080 28.771 358 174 13 111 463 1 282 2.07e-24 103
MsG0680035660.01.T01 MTR_0667s0010 25.641 390 218 16 77 436 9 356 2.48e-24 105
MsG0680035660.01.T01 MTR_3g083010 24.242 396 233 14 77 437 9 372 2.68e-24 105
MsG0680035660.01.T01 MTR_4g070550 26.877 413 220 18 77 452 8 375 2.71e-24 104
MsG0680035660.01.T01 MTR_2g026010 29.348 276 160 11 178 439 89 343 1.03e-23 103
MsG0680035660.01.T01 MTR_2g028130 25.000 388 239 14 74 436 5 365 1.92e-23 102
MsG0680035660.01.T01 MTR_2g426090 27.865 384 206 23 82 437 14 354 8.35e-23 100
MsG0680035660.01.T01 MTR_1g068835 25.936 374 227 16 72 436 2 334 1.82e-22 99.4
MsG0680035660.01.T01 MTR_1g068875 26.087 368 223 16 77 436 7 333 6.28e-22 97.4
MsG0680035660.01.T01 MTR_5g096050 49.074 108 52 2 302 406 1 108 6.56e-22 91.3
MsG0680035660.01.T01 MTR_2g028110 27.078 373 218 17 77 437 7 337 1.78e-21 96.3
MsG0680035660.01.T01 MTR_7g070440 24.877 406 244 13 72 459 5 367 3.09e-21 95.5
MsG0680035660.01.T01 MTR_2g028160 26.178 382 238 17 77 436 8 367 4.37e-21 95.5
MsG0680035660.01.T01 MTR_5g096070 40.909 154 56 5 62 211 15 137 1.33e-20 89.0
MsG0680035660.01.T01 MTR_6g060650 28.188 298 163 10 180 465 113 371 3.59e-20 92.4
MsG0680035660.01.T01 MTR_3g103020 25.063 399 246 15 73 462 19 373 5.00e-20 92.0
MsG0680035660.01.T01 MTR_4g109270 25.500 400 245 14 71 462 5 359 6.13e-20 91.7
MsG0680035660.01.T01 MTR_2g426020 25.908 413 231 20 77 459 9 376 8.85e-20 91.7
MsG0680035660.01.T01 MTR_2g025960 26.645 304 165 16 178 452 4 278 9.61e-20 90.1
MsG0680035660.01.T01 MTR_2g031640 26.615 387 219 19 77 447 9 346 5.37e-19 89.0
MsG0680035660.01.T01 MTR_4g117780 25.558 403 235 13 74 462 11 362 7.37e-19 88.2
MsG0680035660.01.T01 MTR_4g117770 25.735 408 240 12 68 462 5 362 7.65e-19 88.2
MsG0680035660.01.T01 MTR_4g117810 25.735 408 240 12 68 462 5 362 7.65e-19 88.2
MsG0680035660.01.T01 MTR_2g024110 25.122 410 233 19 74 459 4 363 9.94e-19 88.2
MsG0680035660.01.T01 MTR_2g021150 26.902 368 199 19 73 420 13 330 1.61e-18 87.4
MsG0680035660.01.T01 MTR_5g057790 26.426 333 192 12 77 403 49 334 1.75e-18 87.4
MsG0680035660.01.T01 MTR_1g068860 24.798 371 227 15 77 436 7 336 2.97e-18 86.7
MsG0680035660.01.T01 MTR_4g021785 26.173 405 234 16 67 462 2 350 4.29e-18 85.9
MsG0680035660.01.T01 MTR_4g117850 25.248 404 234 17 73 460 22 373 1.69e-17 84.3
MsG0680035660.01.T01 MTR_3g009310 25.075 335 188 12 77 400 45 327 4.52e-17 83.2
MsG0680035660.01.T01 MTR_1g009110 26.361 349 203 16 69 403 9 317 6.56e-17 82.8
MsG0680035660.01.T01 MTR_2g029990 27.273 330 188 14 77 399 54 338 8.17e-17 82.4
MsG0680035660.01.T01 MTR_1g097330 27.811 338 176 18 74 399 16 297 1.43e-16 82.0
MsG0680035660.01.T01 MTR_5g097210 25.187 401 235 17 73 460 8 356 1.68e-16 81.3
MsG0680035660.01.T01 MTR_2g055970 26.100 341 184 14 73 399 210 496 1.88e-16 82.4
MsG0680035660.01.T01 MTR_4g116330 26.988 415 239 18 62 462 11 375 2.20e-16 80.9
MsG0680035660.01.T01 MTR_4g023080 24.812 399 234 15 73 462 8 349 2.41e-16 80.5
MsG0680035660.01.T01 MTR_8g041440 62.295 61 23 0 73 133 14 74 2.89e-16 75.1
MsG0680035660.01.T01 MTR_3g007410 26.630 368 197 15 49 399 27 338 4.02e-16 80.5
MsG0680035660.01.T01 MTR_2g021050 23.936 376 218 14 77 437 8 330 4.84e-16 80.1
MsG0680035660.01.T01 MTR_3g013740 25.263 380 212 16 49 399 6 342 6.11e-16 80.1
MsG0680035660.01.T01 MTR_3g047580 33.113 151 72 3 62 208 2 127 6.42e-16 74.7
MsG0680035660.01.T01 MTR_1g050305 49.398 83 37 2 365 442 21 103 6.81e-16 75.1
MsG0680035660.01.T01 MTR_5g048160 24.697 413 253 18 77 461 7 389 9.55e-16 79.3
MsG0680035660.01.T01 MTR_0115s0020 24.279 416 260 17 74 462 10 397 1.24e-15 79.0
MsG0680035660.01.T01 MTR_3g036290 24.781 343 202 10 77 418 25 312 1.33e-15 78.6
MsG0680035660.01.T01 MTR_2g024100 25.993 277 163 11 182 437 106 361 1.88e-15 78.6
MsG0680035660.01.T01 MTR_3g097190 59.259 54 22 0 384 437 28 81 2.11e-15 74.7
MsG0680035660.01.T01 MTR_1g097560 25.500 400 234 20 67 458 29 372 2.86e-15 77.8
MsG0680035660.01.T01 MTR_3g007360 26.944 360 202 15 51 399 29 338 3.54e-15 77.4
MsG0680035660.01.T01 MTR_1g055135 24.638 414 249 16 63 460 2 368 5.04e-15 77.0
MsG0680035660.01.T01 MTR_8g013010 27.586 261 157 11 54 309 32 265 5.25e-15 76.3
MsG0680035660.01.T01 MTR_8g101580 25.419 358 203 13 78 422 50 356 5.33e-15 77.0
MsG0680035660.01.T01 MTR_2g021155 26.239 343 173 16 77 399 39 321 7.66e-15 77.8
MsG0680035660.01.T01 MTR_3g013770 27.586 348 198 16 77 418 36 335 1.01e-14 76.3
MsG0680035660.01.T01 MTR_4g061340 28.024 339 184 16 77 403 29 319 1.32e-14 75.5
MsG0680035660.01.T01 MTR_3g036430 25.538 325 166 14 77 399 23 273 1.40e-14 75.1
MsG0680035660.01.T01 MTR_3g006670 27.515 338 189 14 77 404 52 343 1.40e-14 75.9
MsG0680035660.01.T01 MTR_3g011100 26.488 336 186 14 77 399 238 525 1.93e-14 76.3
MsG0680035660.01.T01 MTR_8g099460 25.326 383 218 18 77 436 8 345 2.22e-14 75.1
MsG0680035660.01.T01 MTR_4g094365 24.688 401 245 14 73 462 7 361 2.36e-14 74.7
MsG0680035660.01.T01 MTR_0064s0160 23.282 451 263 19 44 461 20 420 2.54e-14 75.1
MsG0680035660.01.T01 MTR_3g014570 28.698 338 180 20 74 400 29 316 2.78e-14 74.7
MsG0680035660.01.T01 MTR_2g021190 27.964 329 187 17 77 399 24 308 5.35e-14 73.9
MsG0680035660.01.T01 MTR_3g034180 24.384 406 254 15 70 462 119 484 1.29e-13 73.2
MsG0680035660.01.T01 MTR_5g049560 32.051 156 78 5 111 247 1 147 1.94e-13 70.9
MsG0680035660.01.T01 MTR_7g079370 25.697 323 199 14 149 460 57 349 2.26e-13 71.6
MsG0680035660.01.T01 MTR_3g014540 26.448 397 225 20 53 436 8 350 2.81e-13 71.6
MsG0680035660.01.T01 MTR_5g094360 36.522 115 59 6 204 313 40 145 3.18e-13 67.8
MsG0680035660.01.T01 MTR_2g046900 23.662 355 227 11 50 399 4 319 3.56e-13 71.2
MsG0680035660.01.T01 MTR_4g116340 29.930 284 137 14 32 310 8 234 5.18e-13 69.3
MsG0680035660.01.T01 MTR_3g047540 47.368 95 33 5 270 363 5 83 5.59e-13 65.1
MsG0680035660.01.T01 MTR_6g053260 25.074 339 184 14 77 399 340 624 5.84e-13 71.6
MsG0680035660.01.T01 MTR_8g032390 24.874 398 225 18 73 462 39 370 5.89e-13 70.5
MsG0680035660.01.T01 MTR_6g027910 24.757 412 230 20 77 458 12 373 6.17e-13 70.5
MsG0680035660.01.T01 MTR_4g023440 27.509 269 148 10 46 312 2 225 6.91e-13 70.1
MsG0680035660.01.T01 MTR_5g056020 26.368 402 234 16 63 425 6 384 7.41e-13 70.9
MsG0680035660.01.T01 MTR_3g024040 25.938 320 181 15 82 399 39 304 7.44e-13 70.1
MsG0680035660.01.T01 MTR_4g109280 25.245 408 233 15 73 465 7 357 7.97e-13 70.1
MsG0680035660.01.T01 MTR_6g065980 23.476 328 186 12 77 399 19 286 1.05e-12 69.7
MsG0680035660.01.T01 MTR_7g078900 26.124 356 203 15 73 400 11 334 1.35e-12 69.7
MsG0680035660.01.T01 MTR_2g078900 24.377 361 202 16 77 426 36 336 1.44e-12 69.3
MsG0680035660.01.T01 MTR_4g023070 23.614 415 239 19 74 462 3 365 1.54e-12 69.3
MsG0680035660.01.T01 MTR_4g023090 22.779 439 262 14 46 465 2 382 1.66e-12 69.3
MsG0680035660.01.T01 MTR_6g016285 24.826 431 263 15 64 458 11 416 1.83e-12 69.3
MsG0680035660.01.T01 MTR_5g070088 24.519 416 257 15 70 464 3 382 1.96e-12 68.9
MsG0680035660.01.T01 MTR_2g461450 24.011 379 224 13 67 429 11 341 2.13e-12 68.6
MsG0680035660.01.T01 MTR_2g047832 23.433 367 225 13 50 399 5 332 2.37e-12 68.9
MsG0680035660.01.T01 MTR_4g024890 24.479 384 225 15 67 424 3 347 3.64e-12 68.2
MsG0680035660.01.T01 MTR_4g117750 25.255 392 220 16 87 460 16 352 3.69e-12 68.6
MsG0680035660.01.T01 MTR_5g057020 24.740 384 211 16 32 403 2 319 5.18e-12 67.4
MsG0680035660.01.T01 MTR_0044s0300 22.475 396 237 17 41 426 7 342 5.50e-12 67.8
MsG0680035660.01.T01 MTR_7g407070 28.228 333 199 15 77 399 35 337 5.87e-12 67.8
MsG0680035660.01.T01 MTR_3g007430 26.911 327 181 16 82 399 51 328 6.55e-12 67.4
MsG0680035660.01.T01 MTR_7g445890 26.254 339 186 14 74 399 16 303 7.73e-12 67.0
MsG0680035660.01.T01 MTR_5g070130 23.929 397 256 16 73 460 10 369 8.84e-12 67.0
MsG0680035660.01.T01 MTR_4g118380 25.269 372 230 12 73 425 7 349 1.02e-11 66.6
MsG0680035660.01.T01 MTR_7g017270 52.542 59 28 0 333 391 23 81 1.02e-11 61.2
MsG0680035660.01.T01 MTR_5g057690 26.393 341 172 18 77 403 49 324 1.18e-11 66.6
MsG0680035660.01.T01 MTR_4g030830 25.000 348 199 12 74 399 9 316 1.28e-11 66.6
MsG0680035660.01.T01 MTR_3g034160 23.645 406 257 16 70 462 5 370 1.88e-11 65.9
MsG0680035660.01.T01 MTR_3g009240 25.680 331 187 15 77 400 39 317 2.80e-11 65.5
MsG0680035660.01.T01 MTR_8g433040 23.881 402 235 13 73 462 17 359 2.90e-11 65.5
MsG0680035660.01.T01 MTR_8g032380 23.881 402 235 13 73 462 17 359 2.90e-11 65.5
MsG0680035660.01.T01 MTR_6g053240 24.925 333 197 13 77 399 31 320 3.24e-11 65.5
MsG0680035660.01.T01 MTR_0242s0060 25.788 349 213 13 69 399 4 324 3.66e-11 65.1
MsG0680035660.01.T01 MTR_0242s0040 25.788 349 213 13 69 399 4 324 3.66e-11 65.1
MsG0680035660.01.T01 MTR_4g023120 23.981 417 241 18 74 465 3 368 4.35e-11 64.7
MsG0680035660.01.T01 MTR_3g036335 23.577 369 218 16 43 400 12 327 4.68e-11 64.7
MsG0680035660.01.T01 MTR_4g055060 26.586 331 195 13 77 400 33 322 6.47e-11 64.3
MsG0680035660.01.T01 MTR_2g046920 25.740 338 187 17 73 399 23 307 6.73e-11 64.3
MsG0680035660.01.T01 MTR_4g031770 25.301 332 196 17 72 397 2 287 7.10e-11 63.9
MsG0680035660.01.T01 MTR_3g007270 24.925 333 203 13 77 400 50 344 7.16e-11 64.3
MsG0680035660.01.T01 MTR_4g118370 25.000 284 161 12 181 460 18 253 7.18e-11 63.2
MsG0680035660.01.T01 MTR_1g442850 25.959 339 206 15 72 400 3 306 7.63e-11 63.9
MsG0680035660.01.T01 MTR_3g006530 24.793 363 213 16 77 429 43 355 8.87e-11 63.9
MsG0680035660.01.T01 MTR_4g023130 22.025 395 209 12 73 462 8 308 9.33e-11 63.2
MsG0680035660.01.T01 MTR_4g019990 23.404 423 255 18 69 458 1 387 9.37e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035660.01.T01 AT4G12560 25.831 391 233 18 74 446 4 355 7.78e-19 89.0
MsG0680035660.01.T01 AT4G12560 25.831 391 233 18 74 446 4 355 7.78e-19 89.0
MsG0680035660.01.T01 AT4G12560 25.831 391 233 18 74 446 4 355 7.78e-19 89.0
MsG0680035660.01.T01 AT4G22390 26.935 323 179 17 145 444 63 351 1.02e-14 76.3
MsG0680035660.01.T01 AT4G22390 26.935 323 179 17 145 444 63 351 1.03e-14 76.3
MsG0680035660.01.T01 AT3G06240 23.762 404 226 17 77 441 39 399 6.58e-12 67.8
MsG0680035660.01.T01 AT3G10430 24.444 360 209 18 77 428 8 312 1.14e-11 66.6

Find 89 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATTGTTATCCGACATTT+AGG 0.203448 6:+110246207 None:intergenic
TGGTGACAGGTTTCAGAATA+TGG 0.227543 6:-110247090 MsG0680035660.01.T01:CDS
AAATATTGATTATGCCTAAA+TGG 0.234895 6:+110247047 None:intergenic
AGAAACTTGGCAGTGTTAAA+TGG 0.236088 6:-110246471 MsG0680035660.01.T01:CDS
CGAAGTTTGCTTAGCTTCAT+TGG 0.255978 6:-110247507 MsG0680035660.01.T01:CDS
CGGAGCATCTCTATTCTTAA+AGG 0.272448 6:-110247162 MsG0680035660.01.T01:CDS
AACCAAGCTCCTCAATCATT+TGG 0.279056 6:+110246244 None:intergenic
TGGTTGTGTCAGAAGGATTA+TGG 0.288305 6:-110246621 MsG0680035660.01.T01:CDS
AACATTGTGTGTTATCTTGA+TGG 0.296684 6:-110246867 MsG0680035660.01.T01:CDS
TGTTGACATGCCGCCTTCTT+TGG 0.299372 6:-110246688 MsG0680035660.01.T01:CDS
TGGACCAAGCTCTTCACTAT+TGG 0.306448 6:-110246366 MsG0680035660.01.T01:CDS
GTCAGAAGGATTATGGATAT+TGG 0.312134 6:-110246614 MsG0680035660.01.T01:CDS
TTGATTTCTCAAATCCATTT+AGG 0.318572 6:-110247061 MsG0680035660.01.T01:CDS
GATACCAAACTAGGTTGAAA+TGG 0.334259 6:+110246576 None:intergenic
TATCCCATTTCAACCTAGTT+TGG 0.347117 6:-110246580 MsG0680035660.01.T01:CDS
CACTGCCAAGTTTCTCCAAT+TGG 0.354362 6:+110246479 None:intergenic
TCCTCCAAGAGTTACTTCTT+AGG 0.372771 6:+110246718 None:intergenic
GTGTGTTATCTTGATGGATT+TGG 0.374247 6:-110246861 MsG0680035660.01.T01:CDS
GGTTTCATTCACTTGCGTTC+AGG 0.374487 6:-110247470 MsG0680035660.01.T01:CDS
CCCTTTGTACCCACTCCAAT+TGG 0.385072 6:+110246321 None:intergenic
TGTATACTGTTTCTGGTGAC+AGG 0.391696 6:-110247103 MsG0680035660.01.T01:CDS
TTGAATGCGTTCGCAAATCA+TGG 0.396141 6:-110247262 MsG0680035660.01.T01:CDS
AAAACAATCATCTACATATG+AGG 0.397741 6:+110246512 None:intergenic
ATCTTGAATTTCTGTGTAGC+TGG 0.399584 6:+110246945 None:intergenic
CCTTGTGTTGAGCTTCCAAT+TGG 0.406573 6:-110246336 MsG0680035660.01.T01:CDS
ACCAAGCTCCTCAATCATTT+GGG 0.408989 6:+110246245 None:intergenic
AATCGTTTAAAAGATTTAAG+AGG 0.408997 6:+110247284 None:intergenic
GGACCAAGCTCTTCACTATT+GGG 0.409630 6:-110246365 MsG0680035660.01.T01:CDS
ATCATCTACATATGAGGGTA+TGG 0.413247 6:+110246518 None:intergenic
TAGGCTATATATCTCCCATA+AGG 0.415397 6:+110246737 None:intergenic
CTTTGCAGATCCAGAAAATG+AGG 0.419654 6:-110246793 MsG0680035660.01.T01:CDS
ATATCAATTATGGGTGAGAT+TGG 0.430120 6:-110246402 MsG0680035660.01.T01:CDS
TTCTGTTACAGATGACTATA+AGG 0.439204 6:-110246832 MsG0680035660.01.T01:CDS
TCCGTATGAGTCTTATATTC+CGG 0.441313 6:-110246910 MsG0680035660.01.T01:CDS
GTTCGTATCTACACTGTTGA+TGG 0.443114 6:+110246982 None:intergenic
CCAATTGGAGTGGGTACAAA+GGG 0.444112 6:-110246321 MsG0680035660.01.T01:CDS
CAAGGAAAGCATTCTTCCAT+TGG 0.450001 6:-110246184 MsG0680035660.01.T01:CDS
CTTAGCTTCATTGGATCCAA+TGG 0.450913 6:-110247498 MsG0680035660.01.T01:CDS
GAAACTTGGCAGTGTTAAAT+GGG 0.468570 6:-110246470 MsG0680035660.01.T01:CDS
GCCTAAGAAGTAACTCTTGG+AGG 0.479775 6:-110246719 MsG0680035660.01.T01:CDS
ATAGCCTAAGAAGTAACTCT+TGG 0.482779 6:-110246722 MsG0680035660.01.T01:CDS
ATACCAAACTAGGTTGAAAT+GGG 0.489308 6:+110246577 None:intergenic
ACATGGATGGAGTGTGTCAT+TGG 0.492746 6:-110246641 MsG0680035660.01.T01:CDS
TAATCATCTATTCCTTCCAA+TGG 0.494855 6:+110246168 None:intergenic
TATGGGTGAGATTGGTATGA+AGG 0.495155 6:-110246394 MsG0680035660.01.T01:CDS
ACCCAAATGATTGAGGAGCT+TGG 0.502571 6:-110246246 MsG0680035660.01.T01:CDS
AATATTTATTTCCGAGACAT+TGG 0.504501 6:+110246766 None:intergenic
TGAAACCAATTGGAGAAACT+TGG 0.506986 6:-110246484 MsG0680035660.01.T01:CDS
TAACCACGCATAACATCATC+CGG 0.513134 6:+110246891 None:intergenic
TGAATGAAACCGTTCTCCAT+TGG 0.523419 6:+110247482 None:intergenic
CCCTCTGTAGTGTCCAAAGA+AGG 0.527518 6:+110246675 None:intergenic
GAAACGATGAAGAACTAGCT+TGG 0.536206 6:-110246281 MsG0680035660.01.T01:CDS
AGATTGGTATGAAGGAATCA+TGG 0.536948 6:-110246386 MsG0680035660.01.T01:CDS
TCTTGAATTTCTGTGTAGCT+GGG 0.540465 6:+110246946 None:intergenic
AGGCTATATATCTCCCATAA+GGG 0.541596 6:+110246738 None:intergenic
ACTTGCATCTCGCTCATATG+TGG 0.552660 6:+110247128 None:intergenic
GTGTCATTGGTTGTGTCAGA+AGG 0.553432 6:-110246628 MsG0680035660.01.T01:CDS
AAGTAAAACGATACCAAACT+AGG 0.554028 6:+110246567 None:intergenic
GAAAGCATTCTTCCATTGGA+AGG 0.560450 6:-110246180 MsG0680035660.01.T01:CDS
ATCAATGGAGAAGAAGAAGA+AGG 0.562514 6:-110247546 None:intergenic
TCCAATTGGAGTGGGTACAA+AGG 0.564383 6:-110246322 MsG0680035660.01.T01:CDS
ATAAAATGAGATCAATGCAA+TGG 0.564600 6:+110246446 None:intergenic
AGAGGGCAACCATGTCTACA+TGG 0.564985 6:-110246658 MsG0680035660.01.T01:CDS
GGCAACCATGTCTACATGGA+TGG 0.565084 6:-110246654 MsG0680035660.01.T01:CDS
AATGAGGAAAACCAATGTCT+CGG 0.566087 6:-110246777 MsG0680035660.01.T01:CDS
AAACAATCATCTACATATGA+GGG 0.566695 6:+110246513 None:intergenic
ATGTCGGATAACAATTTACA+AGG 0.568650 6:-110246202 MsG0680035660.01.T01:CDS
TATTCTTAAAGGTATCAACT+TGG 0.578831 6:-110247151 MsG0680035660.01.T01:CDS
AATATAAGACTCATACGGAC+TGG 0.579223 6:+110246914 None:intergenic
GTTGAGCTTCCAATTGGAGT+GGG 0.579979 6:-110246330 MsG0680035660.01.T01:CDS
TGTTGAGCTTCCAATTGGAG+TGG 0.580626 6:-110246331 MsG0680035660.01.T01:CDS
TCATCTACATATGAGGGTAT+GGG 0.585785 6:+110246519 None:intergenic
TATGAGTACCCAAATGATTG+AGG 0.593870 6:-110246253 MsG0680035660.01.T01:CDS
TGGCCCAATAGTGAAGAGCT+TGG 0.603280 6:+110246362 None:intergenic
TCATTGGATCCAATGGAGAA+CGG 0.604387 6:-110247491 MsG0680035660.01.T01:CDS
TAAGACTCATACGGACTGGA+AGG 0.607652 6:+110246918 None:intergenic
GGAAGCTCAACACAAGGCAA+TGG 0.618687 6:+110246342 None:intergenic
AAGTGGATATACCTAAATGT+CGG 0.625425 6:-110246218 MsG0680035660.01.T01:CDS
TCCGGAATATAAGACTCATA+CGG 0.627728 6:+110246909 None:intergenic
CCAATTGGAAGCTCAACACA+AGG 0.633728 6:+110246336 None:intergenic
CCTTCTTTGGACACTACAGA+GGG 0.639688 6:-110246675 MsG0680035660.01.T01:CDS
AATTGGAGTGGGTACAAAGG+GGG 0.644457 6:-110246319 MsG0680035660.01.T01:CDS
ATTCCGGATGATGTTATGCG+TGG 0.645824 6:-110246894 MsG0680035660.01.T01:CDS
ACACTCCATCCATGTAGACA+TGG 0.650731 6:+110246649 None:intergenic
GCCTTCTTTGGACACTACAG+AGG 0.661708 6:-110246676 MsG0680035660.01.T01:CDS
CAATTGGAGTGGGTACAAAG+GGG 0.688789 6:-110246320 MsG0680035660.01.T01:CDS
TCATCTAATTCTCGTTACGA+CGG 0.689469 6:-110247182 MsG0680035660.01.T01:CDS
TCTGTAGTGTCCAAAGAAGG+CGG 0.691549 6:+110246678 None:intergenic
GTAGATACGAACATGCATTG+TGG 0.711879 6:-110246971 MsG0680035660.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAATATTTTGATCTTTT+TGG - Chr6:110246674-110246693 MsG0680035660.01.T01:CDS 15.0%
!! AATCGTTTAAAAGATTTAAG+AGG + Chr6:110246428-110246447 None:intergenic 20.0%
!!! AAATATTGATTATGCCTAAA+TGG + Chr6:110246665-110246684 None:intergenic 20.0%
!!! ACTTTTCACATATCAATTAT+GGG - Chr6:110247298-110247317 MsG0680035660.01.T01:CDS 20.0%
!!! ATAAATATTTTGAACCCTTA+TGG - Chr6:110246957-110246976 MsG0680035660.01.T01:CDS 20.0%
!!! TAAATATTTTGAACCCTTAT+GGG - Chr6:110246958-110246977 MsG0680035660.01.T01:CDS 20.0%
!!! TACTTTTCACATATCAATTA+TGG - Chr6:110247297-110247316 MsG0680035660.01.T01:CDS 20.0%
!!! TATTTTGATCTTTTTGGTTT+TGG - Chr6:110246680-110246699 MsG0680035660.01.T01:CDS 20.0%
! AAAACAATCATCTACATATG+AGG + Chr6:110247200-110247219 None:intergenic 25.0%
! AAACAATCATCTACATATGA+GGG + Chr6:110247199-110247218 None:intergenic 25.0%
! AATATTTATTTCCGAGACAT+TGG + Chr6:110246946-110246965 None:intergenic 25.0%
! ATAAAATGAGATCAATGCAA+TGG + Chr6:110247266-110247285 None:intergenic 25.0%
! TAAATTGTTATCCGACATTT+AGG + Chr6:110247505-110247524 None:intergenic 25.0%
! TTGATTTCTCAAATCCATTT+AGG - Chr6:110246648-110246667 MsG0680035660.01.T01:CDS 25.0%
!!! TATTCTTAAAGGTATCAACT+TGG - Chr6:110246558-110246577 MsG0680035660.01.T01:CDS 25.0%
!!! TTTGGTTTTGGTAGTATTAA+TGG - Chr6:110246692-110246711 MsG0680035660.01.T01:CDS 25.0%
AACATTGTGTGTTATCTTGA+TGG - Chr6:110246842-110246861 MsG0680035660.01.T01:CDS 30.0%
AAGTAAAACGATACCAAACT+AGG + Chr6:110247145-110247164 None:intergenic 30.0%
AAGTGGATATACCTAAATGT+CGG - Chr6:110247491-110247510 MsG0680035660.01.T01:CDS 30.0%
ATATCAATTATGGGTGAGAT+TGG - Chr6:110247307-110247326 MsG0680035660.01.T01:CDS 30.0%
ATGTCGGATAACAATTTACA+AGG - Chr6:110247507-110247526 MsG0680035660.01.T01:CDS 30.0%
TAATCATCTATTCCTTCCAA+TGG + Chr6:110247544-110247563 None:intergenic 30.0%
TTCTGTTACAGATGACTATA+AGG - Chr6:110246877-110246896 MsG0680035660.01.T01:CDS 30.0%
! ATACCAAACTAGGTTGAAAT+GGG + Chr6:110247135-110247154 None:intergenic 30.0%
!! AAGAGGAAGTTTTGATAGAA+TGG + Chr6:110246411-110246430 None:intergenic 30.0%
!! AAGTTTTGATAGAATGGAGA+AGG + Chr6:110246405-110246424 None:intergenic 30.0%
!! CAAGTTTTGTATACTGTTTC+TGG - Chr6:110246599-110246618 MsG0680035660.01.T01:CDS 30.0%
!! GTTTTGATGTTGAAACCAAT+TGG - Chr6:110247215-110247234 MsG0680035660.01.T01:CDS 30.0%
AATATAAGACTCATACGGAC+TGG + Chr6:110246798-110246817 None:intergenic 35.0%
AATGAGGAAAACCAATGTCT+CGG - Chr6:110246932-110246951 MsG0680035660.01.T01:CDS 35.0%
AGAAACTTGGCAGTGTTAAA+TGG - Chr6:110247238-110247257 MsG0680035660.01.T01:CDS 35.0%
AGATTGGTATGAAGGAATCA+TGG - Chr6:110247323-110247342 MsG0680035660.01.T01:CDS 35.0%
AGGCTATATATCTCCCATAA+GGG + Chr6:110246974-110246993 None:intergenic 35.0%
ATAGCCTAAGAAGTAACTCT+TGG - Chr6:110246987-110247006 MsG0680035660.01.T01:CDS 35.0%
ATCATCTACATATGAGGGTA+TGG + Chr6:110247194-110247213 None:intergenic 35.0%
ATCTTGAATTTCTGTGTAGC+TGG + Chr6:110246767-110246786 None:intergenic 35.0%
GAAACTTGGCAGTGTTAAAT+GGG - Chr6:110247239-110247258 MsG0680035660.01.T01:CDS 35.0%
GTCAGAAGGATTATGGATAT+TGG - Chr6:110247095-110247114 MsG0680035660.01.T01:CDS 35.0%
TAGGCTATATATCTCCCATA+AGG + Chr6:110246975-110246994 None:intergenic 35.0%
TATCCCATTTCAACCTAGTT+TGG - Chr6:110247129-110247148 MsG0680035660.01.T01:CDS 35.0%
TATGAGTACCCAAATGATTG+AGG - Chr6:110247456-110247475 MsG0680035660.01.T01:CDS 35.0%
TCATCTAATTCTCGTTACGA+CGG - Chr6:110246527-110246546 MsG0680035660.01.T01:CDS 35.0%
TCCGGAATATAAGACTCATA+CGG + Chr6:110246803-110246822 None:intergenic 35.0%
TCTTGAATTTCTGTGTAGCT+GGG + Chr6:110246766-110246785 None:intergenic 35.0%
TGAAACCAATTGGAGAAACT+TGG - Chr6:110247225-110247244 MsG0680035660.01.T01:CDS 35.0%
! GATACCAAACTAGGTTGAAA+TGG + Chr6:110247136-110247155 None:intergenic 35.0%
! TCATCTACATATGAGGGTAT+GGG + Chr6:110247193-110247212 None:intergenic 35.0%
! TCCGTATGAGTCTTATATTC+CGG - Chr6:110246799-110246818 MsG0680035660.01.T01:CDS 35.0%
!! GTGTGTTATCTTGATGGATT+TGG - Chr6:110246848-110246867 MsG0680035660.01.T01:CDS 35.0%
!!! CATTGGTTTTCCTCATTTTC+TGG + Chr6:110246929-110246948 None:intergenic 35.0%
AACCAAGCTCCTCAATCATT+TGG + Chr6:110247468-110247487 None:intergenic 40.0%
ACCAAGCTCCTCAATCATTT+GGG + Chr6:110247467-110247486 None:intergenic 40.0%
CTTAGCTTCATTGGATCCAA+TGG - Chr6:110246211-110246230 MsG0680035660.01.T01:CDS 40.0%
CTTTGCAGATCCAGAAAATG+AGG - Chr6:110246916-110246935 MsG0680035660.01.T01:CDS 40.0%
GAAACGATGAAGAACTAGCT+TGG - Chr6:110247428-110247447 MsG0680035660.01.T01:CDS 40.0%
GTAGATACGAACATGCATTG+TGG - Chr6:110246738-110246757 MsG0680035660.01.T01:CDS 40.0%
GTTCGTATCTACACTGTTGA+TGG + Chr6:110246730-110246749 None:intergenic 40.0%
TAACCACGCATAACATCATC+CGG + Chr6:110246821-110246840 None:intergenic 40.0%
TATGGGTGAGATTGGTATGA+AGG - Chr6:110247315-110247334 MsG0680035660.01.T01:CDS 40.0%
TCATTGGATCCAATGGAGAA+CGG - Chr6:110246218-110246237 MsG0680035660.01.T01:CDS 40.0%
TCCTCCAAGAGTTACTTCTT+AGG + Chr6:110246994-110247013 None:intergenic 40.0%
TGAATGAAACCGTTCTCCAT+TGG + Chr6:110246230-110246249 None:intergenic 40.0%
TGGTGACAGGTTTCAGAATA+TGG - Chr6:110246619-110246638 MsG0680035660.01.T01:CDS 40.0%
TGGTTGTGTCAGAAGGATTA+TGG - Chr6:110247088-110247107 MsG0680035660.01.T01:CDS 40.0%
TTGAATGCGTTCGCAAATCA+TGG - Chr6:110246447-110246466 MsG0680035660.01.T01:CDS 40.0%
! CGAAGTTTGCTTAGCTTCAT+TGG - Chr6:110246202-110246221 MsG0680035660.01.T01:CDS 40.0%
! CGGAGCATCTCTATTCTTAA+AGG - Chr6:110246547-110246566 MsG0680035660.01.T01:CDS 40.0%
!! CAAGGAAAGCATTCTTCCAT+TGG - Chr6:110247525-110247544 MsG0680035660.01.T01:CDS 40.0%
!! GAAAGCATTCTTCCATTGGA+AGG - Chr6:110247529-110247548 MsG0680035660.01.T01:CDS 40.0%
!! TGTATACTGTTTCTGGTGAC+AGG - Chr6:110246606-110246625 MsG0680035660.01.T01:CDS 40.0%
!!! TGAGGAGCTTGGTTTTAAAG+TGG - Chr6:110247474-110247493 MsG0680035660.01.T01:CDS 40.0%
AATTGGAGTGGGTACAAAGG+GGG - Chr6:110247390-110247409 MsG0680035660.01.T01:CDS 45.0%
ACACTCCATCCATGTAGACA+TGG + Chr6:110247063-110247082 None:intergenic 45.0%
ACATGGATGGAGTGTGTCAT+TGG - Chr6:110247068-110247087 MsG0680035660.01.T01:CDS 45.0%
ACCCAAATGATTGAGGAGCT+TGG - Chr6:110247463-110247482 MsG0680035660.01.T01:CDS 45.0%
ACTTGCATCTCGCTCATATG+TGG + Chr6:110246584-110246603 None:intergenic 45.0%
ATTCCGGATGATGTTATGCG+TGG - Chr6:110246815-110246834 MsG0680035660.01.T01:CDS 45.0%
CAATTGGAGTGGGTACAAAG+GGG - Chr6:110247389-110247408 MsG0680035660.01.T01:CDS 45.0%
CACTGCCAAGTTTCTCCAAT+TGG + Chr6:110247233-110247252 None:intergenic 45.0%
CCAATTGGAAGCTCAACACA+AGG + Chr6:110247376-110247395 None:intergenic 45.0%
CCAATTGGAGTGGGTACAAA+GGG - Chr6:110247388-110247407 MsG0680035660.01.T01:CDS 45.0%
CCTTCTTTGGACACTACAGA+GGG - Chr6:110247034-110247053 MsG0680035660.01.T01:CDS 45.0%
CCTTGTGTTGAGCTTCCAAT+TGG - Chr6:110247373-110247392 MsG0680035660.01.T01:CDS 45.0%
GCCTAAGAAGTAACTCTTGG+AGG - Chr6:110246990-110247009 MsG0680035660.01.T01:CDS 45.0%
GGACCAAGCTCTTCACTATT+GGG - Chr6:110247344-110247363 MsG0680035660.01.T01:CDS 45.0%
GGTTTCATTCACTTGCGTTC+AGG - Chr6:110246239-110246258 MsG0680035660.01.T01:CDS 45.0%
GTTGAGCTTCCAATTGGAGT+GGG - Chr6:110247379-110247398 MsG0680035660.01.T01:CDS 45.0%
TCCAATTGGAGTGGGTACAA+AGG - Chr6:110247387-110247406 MsG0680035660.01.T01:CDS 45.0%
TCTGTAGTGTCCAAAGAAGG+CGG + Chr6:110247034-110247053 None:intergenic 45.0%
TGGACCAAGCTCTTCACTAT+TGG - Chr6:110247343-110247362 MsG0680035660.01.T01:CDS 45.0%
TGTTGAGCTTCCAATTGGAG+TGG - Chr6:110247378-110247397 MsG0680035660.01.T01:CDS 45.0%
! GTGTCATTGGTTGTGTCAGA+AGG - Chr6:110247081-110247100 MsG0680035660.01.T01:CDS 45.0%
!! TAAGACTCATACGGACTGGA+AGG + Chr6:110246794-110246813 None:intergenic 45.0%
AGAGGGCAACCATGTCTACA+TGG - Chr6:110247051-110247070 MsG0680035660.01.T01:CDS 50.0%
CCCTCTGTAGTGTCCAAAGA+AGG + Chr6:110247037-110247056 None:intergenic 50.0%
CCCTTTGTACCCACTCCAAT+TGG + Chr6:110247391-110247410 None:intergenic 50.0%
GCCTTCTTTGGACACTACAG+AGG - Chr6:110247033-110247052 MsG0680035660.01.T01:CDS 50.0%
GGAAGCTCAACACAAGGCAA+TGG + Chr6:110247370-110247389 None:intergenic 50.0%
GGCAACCATGTCTACATGGA+TGG - Chr6:110247055-110247074 MsG0680035660.01.T01:CDS 50.0%
TGGCCCAATAGTGAAGAGCT+TGG + Chr6:110247350-110247369 None:intergenic 50.0%
TGTTGACATGCCGCCTTCTT+TGG - Chr6:110247021-110247040 MsG0680035660.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr6 gene 110246167 110247564 110246167 ID=MsG0680035660.01;Name=MsG0680035660.01
Chr6 mRNA 110246167 110247564 110246167 ID=MsG0680035660.01.T01;Parent=MsG0680035660.01;Name=MsG0680035660.01.T01;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|465
Chr6 exon 110246167 110247564 110246167 ID=MsG0680035660.01.T01:exon:14744;Parent=MsG0680035660.01.T01
Chr6 CDS 110246167 110247564 110246167 ID=MsG0680035660.01.T01:cds;Parent=MsG0680035660.01.T01
Gene Sequence

>MsG0680035660.01.T01

ATGGAGAAGAAGAAGAAGGAGAAATCAGTGACAAACGAAGTTTGCTTAGCTTCATTGGATCCAATGGAGAACGGTTTCATTCACTTGCGTTCAGGTAAAAGAGTTCTCAAAAGTGAAGAAGATGTTTTGTCTCGTCTCGAATCAACAGAGAAGAAGAAGAAGAAGAAGAAGATATTTGTGTCTGCAACAAAGAAGAATGATACTGTGAGCAACACTTATATATCTGATGATATTGCCTTCTCCATTCTATCAAAACTTCCTCTTAAATCTTTTAAACGATTTGAATGCGTTCGCAAATCATGGTCTCTCTTATCTGAAAATACTCTTTTCATGAACATGTTTCGCAACAATTTCTTATCATCATCTAATTCTCGTTACGACGGAGCATCTCTATTCTTAAAGGTATCAACTTGGCCACATATGAGCGAGATGCAAGTTTTGTATACTGTTTCTGGTGACAGGTTTCAGAATATGGTTAAATTTGATTTCTCAAATCCATTTAGGCATAATCAATATTTTGATCTTTTTGGTTTTGGTAGTATTAATGGCACAATCTTGCTCCATCAACAGTGTAGATACGAACATGCATTGTGGCACCCAGCTACACAGAAATTCAAGATGCTTCCTTCCAGTCCGTATGAGTCTTATATTCCGGATGATGTTATGCGTGGTTATAACATTGTGTGTTATCTTGATGGATTTGGTTATGATTCTGTTACAGATGACTATAAGGTCGTTCGTTATATTTTCTTTGCAGATCCAGAAAATGAGGAAAACCAATGTCTCGGAAATAAATATTTTGAACCCTTATGGGAGATATATAGCCTAAGAAGTAACTCTTGGAGGAAACTTGATGTTGACATGCCGCCTTCTTTGGACACTACAGAGGGCAACCATGTCTACATGGATGGAGTGTGTCATTGGTTGTGTCAGAAGGATTATGGATATTGGAAAAATCATGATATCCCATTTCAACCTAGTTTGGTATCGTTTTACTTGAGCAACGAAGTGTTCTTCATAACACCCATACCCTCATATGTAGATGATTGTTTTGATGTTGAAACCAATTGGAGAAACTTGGCAGTGTTAAATGGGTCCATTGCATTGATCTCATTTTATGAAAAGACAACTACTTTTCACATATCAATTATGGGTGAGATTGGTATGAAGGAATCATGGACCAAGCTCTTCACTATTGGGCCATTGCCTTGTGTTGAGCTTCCAATTGGAGTGGGTACAAAGGGGGAAATATTCTTCATAAGAAACGATGAAGAACTAGCTTGGTTTGATATGAGTACCCAAATGATTGAGGAGCTTGGTTTTAAAGTGGATATACCTAAATGTCGGATAACAATTTACAAGGAAAGCATTCTTCCATTGGAAGGAATAGATGATTAA

Protein sequence

>MsG0680035660.01.T01

MEKKKKEKSVTNEVCLASLDPMENGFIHLRSGKRVLKSEEDVLSRLESTEKKKKKKKIFVSATKKNDTVSNTYISDDIAFSILSKLPLKSFKRFECVRKSWSLLSENTLFMNMFRNNFLSSSNSRYDGASLFLKVSTWPHMSEMQVLYTVSGDRFQNMVKFDFSNPFRHNQYFDLFGFGSINGTILLHQQCRYEHALWHPATQKFKMLPSSPYESYIPDDVMRGYNIVCYLDGFGYDSVTDDYKVVRYIFFADPENEENQCLGNKYFEPLWEIYSLRSNSWRKLDVDMPPSLDTTEGNHVYMDGVCHWLCQKDYGYWKNHDIPFQPSLVSFYLSNEVFFITPIPSYVDDCFDVETNWRNLAVLNGSIALISFYEKTTTFHISIMGEIGMKESWTKLFTIGPLPCVELPIGVGTKGEIFFIRNDEELAWFDMSTQMIEELGFKVDIPKCRITIYKESILPLEGIDD*