Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035810.01.T01 | AES76989.1 | 71.594 | 433 | 79 | 7 | 1 | 415 | 16 | 422 | 0 | 582 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035810.01.T01 | Q9SU30 | 22.798 | 386 | 243 | 13 | 20 | 390 | 4 | 349 | 9.74E-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035810.01.T01 | G7KHZ4 | 71.594 | 433 | 79 | 7 | 1 | 415 | 16 | 422 | 0.0 | 582 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035810.01.T01 | MTR_6g090250 | 71.594 | 433 | 79 | 7 | 1 | 415 | 16 | 422 | 0.0 | 582 |
MsG0680035810.01.T01 | MTR_6g079810 | 59.135 | 416 | 155 | 8 | 1 | 412 | 54 | 458 | 7.13e-157 | 451 |
MsG0680035810.01.T01 | MTR_0134s0060 | 57.828 | 396 | 153 | 8 | 8 | 394 | 1 | 391 | 7.55e-152 | 436 |
MsG0680035810.01.T01 | MTR_6g086825 | 58.313 | 415 | 142 | 10 | 12 | 414 | 62 | 457 | 3.74e-145 | 421 |
MsG0680035810.01.T01 | MTR_6g079770 | 57.314 | 417 | 162 | 9 | 5 | 412 | 3 | 412 | 7.41e-145 | 419 |
MsG0680035810.01.T01 | MTR_4g028510 | 57.246 | 414 | 148 | 10 | 8 | 412 | 4 | 397 | 6.52e-143 | 415 |
MsG0680035810.01.T01 | MTR_4g028660 | 54.699 | 415 | 160 | 10 | 8 | 415 | 4 | 397 | 3.16e-138 | 401 |
MsG0680035810.01.T01 | MTR_4g027450 | 54.699 | 415 | 160 | 10 | 8 | 415 | 4 | 397 | 3.16e-138 | 401 |
MsG0680035810.01.T01 | MTR_6g080680 | 55.476 | 420 | 147 | 9 | 1 | 411 | 1 | 389 | 2.32e-137 | 399 |
MsG0680035810.01.T01 | MTR_0054s0090 | 53.901 | 423 | 166 | 11 | 1 | 414 | 1 | 403 | 5.09e-135 | 393 |
MsG0680035810.01.T01 | MTR_4g028680 | 54.831 | 414 | 156 | 12 | 8 | 412 | 4 | 395 | 4.05e-134 | 390 |
MsG0680035810.01.T01 | MTR_4g130330 | 53.960 | 404 | 159 | 8 | 16 | 412 | 3 | 386 | 5.27e-134 | 390 |
MsG0680035810.01.T01 | MTR_6g090180 | 54.846 | 423 | 161 | 11 | 3 | 415 | 34 | 436 | 1.72e-133 | 390 |
MsG0680035810.01.T01 | MTR_0054s0100 | 53.494 | 415 | 168 | 10 | 9 | 414 | 7 | 405 | 2.65e-133 | 389 |
MsG0680035810.01.T01 | MTR_6g078010 | 56.787 | 361 | 120 | 6 | 57 | 412 | 1 | 330 | 1.03e-132 | 385 |
MsG0680035810.01.T01 | MTR_6g478230 | 52.425 | 433 | 145 | 12 | 4 | 414 | 11 | 404 | 1.61e-129 | 380 |
MsG0680035810.01.T01 | MTR_4g028750 | 53.435 | 393 | 154 | 12 | 8 | 392 | 4 | 375 | 2.33e-123 | 363 |
MsG0680035810.01.T01 | MTR_6g090260 | 78.010 | 191 | 41 | 1 | 225 | 415 | 73 | 262 | 2.78e-105 | 312 |
MsG0680035810.01.T01 | MTR_6g090260 | 80.282 | 71 | 14 | 0 | 1 | 71 | 1 | 71 | 1.09e-29 | 116 |
MsG0680035810.01.T01 | MTR_0129s0070 | 46.081 | 421 | 193 | 12 | 1 | 415 | 2 | 394 | 2.58e-104 | 315 |
MsG0680035810.01.T01 | MTR_8g063440 | 45.255 | 411 | 186 | 11 | 8 | 412 | 1 | 378 | 8.11e-102 | 308 |
MsG0680035810.01.T01 | MTR_0129s0120 | 45.803 | 417 | 195 | 11 | 5 | 415 | 3 | 394 | 1.67e-101 | 307 |
MsG0680035810.01.T01 | MTR_6g461660 | 44.601 | 426 | 197 | 12 | 1 | 415 | 1 | 398 | 2.79e-101 | 307 |
MsG0680035810.01.T01 | MTR_5g097220 | 44.444 | 414 | 211 | 9 | 10 | 415 | 4 | 406 | 3.82e-101 | 307 |
MsG0680035810.01.T01 | MTR_2g021800 | 44.496 | 427 | 196 | 13 | 4 | 409 | 2 | 408 | 3.73e-100 | 305 |
MsG0680035810.01.T01 | MTR_5g097680 | 43.807 | 436 | 203 | 11 | 4 | 412 | 2 | 422 | 9.67e-100 | 304 |
MsG0680035810.01.T01 | MTR_2g022000 | 46.329 | 395 | 178 | 10 | 17 | 391 | 13 | 393 | 2.33e-99 | 303 |
MsG0680035810.01.T01 | MTR_7g104710 | 52.381 | 336 | 100 | 7 | 4 | 330 | 2 | 286 | 6.98e-99 | 298 |
MsG0680035810.01.T01 | MTR_2g038680 | 43.794 | 427 | 199 | 14 | 5 | 412 | 2 | 406 | 1.80e-98 | 300 |
MsG0680035810.01.T01 | MTR_6g079790 | 54.658 | 322 | 121 | 8 | 99 | 413 | 2 | 305 | 1.95e-98 | 296 |
MsG0680035810.01.T01 | MTR_7g023800 | 46.703 | 364 | 132 | 7 | 59 | 415 | 1 | 309 | 8.17e-98 | 295 |
MsG0680035810.01.T01 | MTR_5g097330 | 43.721 | 430 | 189 | 14 | 7 | 415 | 4 | 401 | 4.69e-94 | 288 |
MsG0680035810.01.T01 | MTR_0129s0050 | 44.552 | 413 | 193 | 13 | 13 | 409 | 8 | 400 | 1.55e-93 | 287 |
MsG0680035810.01.T01 | MTR_2g021950 | 43.062 | 418 | 195 | 15 | 8 | 412 | 5 | 392 | 1.09e-92 | 285 |
MsG0680035810.01.T01 | MTR_5g069390 | 41.549 | 426 | 191 | 13 | 14 | 413 | 20 | 413 | 1.50e-92 | 288 |
MsG0680035810.01.T01 | MTR_5g037680 | 42.993 | 421 | 171 | 12 | 16 | 411 | 4 | 380 | 2.00e-92 | 286 |
MsG0680035810.01.T01 | MTR_4g102410 | 42.824 | 432 | 198 | 15 | 3 | 414 | 45 | 447 | 1.82e-91 | 283 |
MsG0680035810.01.T01 | MTR_6g087620 | 50.926 | 324 | 111 | 8 | 87 | 407 | 1 | 279 | 6.29e-91 | 276 |
MsG0680035810.01.T01 | MTR_4g055820 | 45.000 | 380 | 168 | 12 | 9 | 371 | 4 | 359 | 4.72e-90 | 276 |
MsG0680035810.01.T01 | MTR_8g012090 | 43.636 | 385 | 152 | 9 | 9 | 384 | 6 | 334 | 1.96e-88 | 271 |
MsG0680035810.01.T01 | MTR_3g011120 | 43.382 | 408 | 184 | 15 | 7 | 406 | 1 | 369 | 4.83e-88 | 272 |
MsG0680035810.01.T01 | MTR_5g096630 | 41.822 | 428 | 207 | 14 | 7 | 414 | 6 | 411 | 5.55e-88 | 273 |
MsG0680035810.01.T01 | MTR_1g007450 | 43.860 | 399 | 192 | 13 | 8 | 396 | 1 | 377 | 1.30e-87 | 273 |
MsG0680035810.01.T01 | MTR_6g070880 | 57.143 | 252 | 97 | 6 | 3 | 249 | 16 | 261 | 3.76e-87 | 266 |
MsG0680035810.01.T01 | MTR_6g071420 | 57.143 | 252 | 97 | 6 | 3 | 249 | 16 | 261 | 3.76e-87 | 266 |
MsG0680035810.01.T01 | MTR_0831s0010 | 40.878 | 433 | 189 | 17 | 4 | 415 | 33 | 419 | 2.46e-86 | 269 |
MsG0680035810.01.T01 | MTR_2g065840 | 39.952 | 418 | 204 | 12 | 8 | 412 | 1 | 384 | 2.55e-86 | 268 |
MsG0680035810.01.T01 | MTR_7g017130 | 42.280 | 421 | 207 | 15 | 1 | 413 | 1 | 393 | 2.79e-86 | 268 |
MsG0680035810.01.T01 | MTR_2g021770 | 39.437 | 426 | 207 | 12 | 11 | 412 | 4 | 402 | 1.07e-85 | 267 |
MsG0680035810.01.T01 | MTR_2g104340 | 41.190 | 420 | 202 | 12 | 7 | 411 | 1 | 390 | 1.24e-85 | 266 |
MsG0680035810.01.T01 | MTR_4g117550 | 41.106 | 416 | 187 | 13 | 4 | 411 | 2 | 367 | 2.64e-85 | 265 |
MsG0680035810.01.T01 | MTR_1g007410 | 42.718 | 412 | 195 | 19 | 2 | 399 | 6 | 390 | 6.38e-85 | 265 |
MsG0680035810.01.T01 | MTR_7g017170 | 43.467 | 398 | 191 | 14 | 1 | 390 | 1 | 372 | 1.26e-84 | 265 |
MsG0680035810.01.T01 | MTR_5g092850 | 42.615 | 413 | 202 | 14 | 15 | 415 | 11 | 400 | 2.37e-84 | 263 |
MsG0680035810.01.T01 | MTR_2g065860 | 40.338 | 414 | 207 | 11 | 8 | 412 | 1 | 383 | 2.66e-84 | 263 |
MsG0680035810.01.T01 | MTR_8g064890 | 40.148 | 406 | 206 | 9 | 13 | 412 | 9 | 383 | 5.59e-84 | 262 |
MsG0680035810.01.T01 | MTR_5g074850 | 43.500 | 400 | 190 | 14 | 7 | 391 | 22 | 400 | 1.36e-83 | 275 |
MsG0680035810.01.T01 | MTR_8g467670 | 41.432 | 391 | 181 | 12 | 14 | 395 | 8 | 359 | 1.10e-82 | 259 |
MsG0680035810.01.T01 | MTR_5g096910 | 40.521 | 422 | 194 | 14 | 9 | 412 | 6 | 388 | 1.50e-82 | 258 |
MsG0680035810.01.T01 | MTR_5g097350 | 42.890 | 429 | 183 | 15 | 4 | 415 | 2 | 385 | 7.24e-82 | 256 |
MsG0680035810.01.T01 | MTR_8g033140 | 39.907 | 431 | 202 | 13 | 13 | 413 | 11 | 414 | 1.82e-81 | 256 |
MsG0680035810.01.T01 | MTR_8g464770 | 40.291 | 412 | 200 | 11 | 8 | 411 | 1 | 374 | 5.21e-81 | 254 |
MsG0680035810.01.T01 | MTR_5g059430 | 39.863 | 439 | 191 | 15 | 14 | 414 | 20 | 423 | 3.45e-80 | 253 |
MsG0680035810.01.T01 | MTR_2g034700 | 41.162 | 413 | 188 | 12 | 13 | 415 | 7 | 374 | 6.88e-80 | 251 |
MsG0680035810.01.T01 | MTR_7g069550 | 40.602 | 399 | 198 | 12 | 7 | 390 | 1 | 375 | 2.51e-79 | 250 |
MsG0680035810.01.T01 | MTR_2g104280 | 41.327 | 392 | 183 | 13 | 19 | 388 | 13 | 379 | 4.26e-78 | 248 |
MsG0680035810.01.T01 | MTR_2g066200 | 39.529 | 425 | 199 | 16 | 8 | 414 | 1 | 385 | 1.14e-77 | 246 |
MsG0680035810.01.T01 | MTR_8g039500 | 41.237 | 388 | 175 | 15 | 8 | 384 | 1 | 346 | 1.81e-77 | 244 |
MsG0680035810.01.T01 | MTR_8g046310 | 39.623 | 424 | 189 | 16 | 7 | 413 | 1 | 374 | 7.04e-77 | 243 |
MsG0680035810.01.T01 | MTR_8g033090 | 39.261 | 433 | 214 | 12 | 7 | 414 | 1 | 409 | 8.16e-77 | 244 |
MsG0680035810.01.T01 | MTR_7g017040 | 41.330 | 421 | 207 | 12 | 7 | 415 | 4 | 396 | 1.72e-76 | 243 |
MsG0680035810.01.T01 | MTR_6g079730 | 80.282 | 142 | 26 | 1 | 274 | 415 | 9 | 148 | 3.13e-76 | 234 |
MsG0680035810.01.T01 | MTR_2g066170 | 40.338 | 414 | 205 | 16 | 8 | 412 | 1 | 381 | 7.16e-76 | 241 |
MsG0680035810.01.T01 | MTR_8g018110 | 38.263 | 426 | 213 | 12 | 7 | 414 | 1 | 394 | 7.40e-76 | 241 |
MsG0680035810.01.T01 | MTR_1g053510 | 37.819 | 431 | 214 | 12 | 7 | 413 | 2 | 402 | 1.39e-75 | 241 |
MsG0680035810.01.T01 | MTR_5g075370 | 41.162 | 396 | 198 | 17 | 16 | 395 | 4 | 380 | 1.42e-75 | 251 |
MsG0680035810.01.T01 | MTR_7g079640 | 40.665 | 391 | 168 | 13 | 13 | 388 | 8 | 349 | 1.07e-74 | 238 |
MsG0680035810.01.T01 | MTR_8g041270 | 40.465 | 430 | 200 | 18 | 7 | 411 | 2 | 400 | 1.23e-74 | 238 |
MsG0680035810.01.T01 | MTR_5g092860 | 42.975 | 363 | 165 | 13 | 38 | 391 | 20 | 349 | 3.12e-74 | 236 |
MsG0680035810.01.T01 | MTR_5g024260 | 41.562 | 397 | 179 | 14 | 13 | 388 | 15 | 379 | 5.61e-74 | 237 |
MsG0680035810.01.T01 | MTR_2g066150 | 39.379 | 419 | 180 | 16 | 8 | 414 | 1 | 357 | 2.29e-73 | 234 |
MsG0680035810.01.T01 | MTR_4g014370 | 38.161 | 435 | 209 | 15 | 10 | 414 | 2 | 406 | 6.66e-73 | 234 |
MsG0680035810.01.T01 | MTR_5g064700 | 40.000 | 385 | 178 | 14 | 59 | 412 | 1 | 363 | 2.43e-72 | 231 |
MsG0680035810.01.T01 | MTR_2g064950 | 40.609 | 394 | 187 | 14 | 11 | 388 | 1 | 363 | 9.11e-72 | 231 |
MsG0680035810.01.T01 | MTR_8g033110 | 37.727 | 440 | 214 | 15 | 7 | 414 | 1 | 412 | 2.40e-70 | 228 |
MsG0680035810.01.T01 | MTR_5g043605 | 35.593 | 413 | 181 | 8 | 2 | 413 | 7 | 335 | 8.02e-70 | 225 |
MsG0680035810.01.T01 | MTR_8g063330 | 38.583 | 381 | 183 | 14 | 8 | 370 | 1 | 348 | 9.05e-70 | 228 |
MsG0680035810.01.T01 | MTR_5g072060 | 40.992 | 383 | 175 | 13 | 19 | 390 | 5 | 347 | 2.27e-69 | 231 |
MsG0680035810.01.T01 | MTR_5g091140 | 39.183 | 416 | 190 | 15 | 1 | 399 | 30 | 399 | 2.75e-69 | 225 |
MsG0680035810.01.T01 | MTR_8g046200 | 36.161 | 448 | 211 | 13 | 9 | 413 | 3 | 418 | 1.26e-68 | 223 |
MsG0680035810.01.T01 | MTR_7g111700 | 37.736 | 424 | 188 | 12 | 1 | 412 | 1 | 360 | 1.81e-67 | 219 |
MsG0680035810.01.T01 | MTR_8g032980 | 36.364 | 440 | 219 | 15 | 9 | 413 | 4 | 417 | 4.77e-66 | 217 |
MsG0680035810.01.T01 | MTR_8g013000 | 41.192 | 369 | 179 | 13 | 19 | 373 | 9 | 353 | 1.51e-65 | 215 |
MsG0680035810.01.T01 | MTR_4g007940 | 39.091 | 330 | 155 | 10 | 87 | 401 | 28 | 326 | 1.55e-65 | 213 |
MsG0680035810.01.T01 | MTR_8g046220 | 36.425 | 442 | 202 | 16 | 9 | 413 | 3 | 402 | 2.35e-65 | 214 |
MsG0680035810.01.T01 | MTR_6g465360 | 51.064 | 235 | 101 | 9 | 4 | 229 | 47 | 276 | 7.14e-64 | 207 |
MsG0680035810.01.T01 | MTR_8g064790 | 35.149 | 404 | 179 | 12 | 13 | 412 | 8 | 332 | 3.11e-63 | 207 |
MsG0680035810.01.T01 | MTR_1g007430 | 41.127 | 355 | 164 | 11 | 31 | 375 | 7 | 326 | 9.23e-63 | 205 |
MsG0680035810.01.T01 | MTR_5g022850 | 38.542 | 384 | 157 | 15 | 18 | 390 | 14 | 329 | 3.92e-62 | 204 |
MsG0680035810.01.T01 | MTR_5g074800 | 38.968 | 349 | 181 | 12 | 59 | 397 | 1 | 327 | 8.65e-61 | 201 |
MsG0680035810.01.T01 | MTR_1g098180 | 35.885 | 418 | 188 | 13 | 11 | 413 | 10 | 362 | 1.04e-60 | 201 |
MsG0680035810.01.T01 | MTR_8g063370 | 34.058 | 414 | 232 | 11 | 2 | 409 | 6 | 384 | 8.37e-60 | 200 |
MsG0680035810.01.T01 | MTR_7g016930 | 40.108 | 369 | 175 | 13 | 8 | 373 | 5 | 330 | 1.98e-59 | 197 |
MsG0680035810.01.T01 | MTR_5g076490 | 40.710 | 366 | 172 | 12 | 57 | 412 | 1 | 331 | 3.12e-59 | 196 |
MsG0680035810.01.T01 | MTR_5g096900 | 40.000 | 345 | 146 | 11 | 17 | 339 | 9 | 314 | 8.71e-59 | 195 |
MsG0680035810.01.T01 | MTR_8g063350 | 35.509 | 383 | 167 | 13 | 14 | 388 | 8 | 318 | 9.87e-57 | 190 |
MsG0680035810.01.T01 | MTR_2g021920 | 44.672 | 244 | 114 | 8 | 178 | 412 | 37 | 268 | 6.41e-54 | 180 |
MsG0680035810.01.T01 | MTR_5g068490 | 35.849 | 318 | 152 | 8 | 96 | 413 | 8 | 273 | 1.02e-53 | 180 |
MsG0680035810.01.T01 | MTR_6g004450 | 42.023 | 257 | 126 | 8 | 159 | 414 | 32 | 266 | 8.26e-53 | 177 |
MsG0680035810.01.T01 | MTR_8g063310 | 33.501 | 397 | 214 | 13 | 13 | 394 | 15 | 376 | 1.10e-51 | 179 |
MsG0680035810.01.T01 | MTR_1g050312 | 38.629 | 321 | 126 | 14 | 87 | 396 | 16 | 276 | 3.15e-51 | 174 |
MsG0680035810.01.T01 | MTR_5g086590 | 41.107 | 253 | 117 | 6 | 137 | 389 | 13 | 233 | 1.75e-49 | 168 |
MsG0680035810.01.T01 | MTR_5g094350 | 36.860 | 293 | 148 | 5 | 18 | 300 | 11 | 276 | 1.55e-48 | 167 |
MsG0680035810.01.T01 | MTR_5g097850 | 50.000 | 188 | 77 | 4 | 232 | 412 | 63 | 240 | 1.93e-48 | 166 |
MsG0680035810.01.T01 | MTR_4g016000 | 41.004 | 239 | 93 | 7 | 142 | 375 | 2 | 197 | 1.19e-46 | 160 |
MsG0680035810.01.T01 | MTR_5g023970 | 47.895 | 190 | 94 | 4 | 225 | 414 | 9 | 193 | 5.79e-46 | 157 |
MsG0680035810.01.T01 | MTR_3g018750 | 40.726 | 248 | 128 | 7 | 177 | 415 | 2 | 239 | 1.49e-45 | 157 |
MsG0680035810.01.T01 | MTR_8g033000 | 35.450 | 378 | 204 | 14 | 57 | 413 | 1 | 359 | 1.02e-44 | 159 |
MsG0680035810.01.T01 | MTR_5g097820 | 37.544 | 285 | 127 | 12 | 1 | 265 | 1 | 254 | 3.51e-44 | 155 |
MsG0680035810.01.T01 | MTR_1g050308 | 39.179 | 268 | 110 | 11 | 2 | 251 | 11 | 243 | 6.69e-44 | 156 |
MsG0680035810.01.T01 | MTR_1g050308 | 49.438 | 89 | 41 | 2 | 307 | 391 | 238 | 326 | 4.72e-17 | 82.4 |
MsG0680035810.01.T01 | MTR_7g019250 | 32.723 | 382 | 184 | 10 | 28 | 400 | 102 | 419 | 1.45e-43 | 158 |
MsG0680035810.01.T01 | MTR_1g076810 | 40.530 | 264 | 126 | 9 | 3 | 259 | 2 | 241 | 1.84e-41 | 155 |
MsG0680035810.01.T01 | MTR_2g104260 | 37.124 | 299 | 152 | 10 | 7 | 291 | 1 | 277 | 3.22e-40 | 145 |
MsG0680035810.01.T01 | MTR_6g009350 | 40.099 | 202 | 104 | 5 | 179 | 378 | 9 | 195 | 1.89e-37 | 135 |
MsG0680035810.01.T01 | MTR_1g115205 | 39.474 | 266 | 108 | 12 | 8 | 264 | 14 | 235 | 2.05e-37 | 136 |
MsG0680035810.01.T01 | MTR_5g066420 | 48.026 | 152 | 69 | 4 | 258 | 404 | 1 | 147 | 3.85e-37 | 132 |
MsG0680035810.01.T01 | MTR_8g036970 | 42.222 | 180 | 91 | 4 | 227 | 405 | 147 | 314 | 1.30e-36 | 137 |
MsG0680035810.01.T01 | MTR_8g036970 | 40.000 | 140 | 73 | 3 | 24 | 154 | 2 | 139 | 9.44e-20 | 90.5 |
MsG0680035810.01.T01 | MTR_4g014370 | 41.969 | 193 | 95 | 5 | 227 | 414 | 154 | 334 | 4.49e-36 | 135 |
MsG0680035810.01.T01 | MTR_4g014370 | 44.853 | 136 | 62 | 7 | 1 | 127 | 6 | 137 | 6.68e-19 | 87.8 |
MsG0680035810.01.T01 | MTR_4g094400 | 60.550 | 109 | 32 | 1 | 251 | 348 | 3 | 111 | 7.36e-36 | 128 |
MsG0680035810.01.T01 | MTR_3g030620 | 43.902 | 164 | 84 | 4 | 241 | 399 | 5 | 165 | 7.97e-36 | 130 |
MsG0680035810.01.T01 | MTR_5g037190 | 37.413 | 286 | 131 | 9 | 8 | 285 | 5 | 250 | 1.08e-35 | 132 |
MsG0680035810.01.T01 | MTR_5g098950 | 38.983 | 236 | 92 | 9 | 139 | 373 | 90 | 274 | 5.84e-35 | 130 |
MsG0680035810.01.T01 | MTR_7g017150 | 43.523 | 193 | 94 | 5 | 227 | 414 | 82 | 264 | 4.63e-34 | 128 |
MsG0680035810.01.T01 | MTR_7g017120 | 43.005 | 193 | 95 | 5 | 227 | 414 | 81 | 263 | 1.20e-33 | 127 |
MsG0680035810.01.T01 | MTR_8g073570 | 41.176 | 187 | 85 | 5 | 11 | 189 | 1 | 170 | 1.56e-33 | 124 |
MsG0680035810.01.T01 | MTR_5g096920 | 45.161 | 155 | 75 | 4 | 258 | 411 | 1 | 146 | 1.56e-33 | 123 |
MsG0680035810.01.T01 | MTR_8g035690 | 36.466 | 266 | 131 | 10 | 170 | 413 | 50 | 299 | 5.57e-33 | 126 |
MsG0680035810.01.T01 | MTR_5g097660 | 50.000 | 118 | 56 | 2 | 299 | 415 | 3 | 118 | 4.27e-31 | 115 |
MsG0680035810.01.T01 | MTR_5g097540 | 45.946 | 148 | 68 | 4 | 227 | 373 | 97 | 233 | 1.24e-30 | 119 |
MsG0680035810.01.T01 | MTR_5g036250 | 52.427 | 103 | 46 | 1 | 311 | 413 | 8 | 107 | 3.16e-28 | 110 |
MsG0680035810.01.T01 | MTR_5g086780 | 48.413 | 126 | 60 | 1 | 266 | 391 | 108 | 228 | 6.77e-28 | 110 |
MsG0680035810.01.T01 | MTR_5g086780 | 69.811 | 53 | 15 | 1 | 8 | 60 | 5 | 56 | 3.71e-13 | 68.9 |
MsG0680035810.01.T01 | MTR_5g097650 | 44.937 | 158 | 71 | 6 | 3 | 154 | 2 | 149 | 9.61e-28 | 107 |
MsG0680035810.01.T01 | MTR_5g096070 | 39.247 | 186 | 70 | 7 | 5 | 185 | 11 | 158 | 1.80e-26 | 104 |
MsG0680035810.01.T01 | MTR_6g087660 | 57.143 | 105 | 39 | 2 | 4 | 102 | 2 | 106 | 6.01e-26 | 104 |
MsG0680035810.01.T01 | MTR_2g022020 | 43.220 | 118 | 63 | 2 | 294 | 411 | 1 | 114 | 4.22e-25 | 99.4 |
MsG0680035810.01.T01 | MTR_5g091150 | 34.146 | 246 | 76 | 9 | 99 | 321 | 2 | 184 | 2.37e-24 | 100 |
MsG0680035810.01.T01 | MTR_1g047080 | 27.596 | 366 | 169 | 15 | 57 | 413 | 1 | 279 | 2.02e-22 | 97.1 |
MsG0680035810.01.T01 | MTR_5g096050 | 48.148 | 108 | 48 | 1 | 258 | 357 | 1 | 108 | 3.16e-22 | 91.7 |
MsG0680035810.01.T01 | MTR_1g068835 | 24.352 | 386 | 229 | 16 | 18 | 390 | 2 | 337 | 3.46e-22 | 97.8 |
MsG0680035810.01.T01 | MTR_3g019290 | 34.061 | 229 | 97 | 8 | 8 | 233 | 1 | 178 | 3.84e-22 | 93.2 |
MsG0680035810.01.T01 | MTR_7g101200 | 31.174 | 247 | 117 | 10 | 130 | 372 | 31 | 228 | 1.87e-21 | 92.8 |
MsG0680035810.01.T01 | MTR_2g426070 | 26.289 | 388 | 213 | 18 | 28 | 387 | 14 | 356 | 2.48e-21 | 95.5 |
MsG0680035810.01.T01 | MTR_0667s0010 | 24.051 | 395 | 239 | 15 | 15 | 387 | 1 | 356 | 3.88e-21 | 95.1 |
MsG0680035810.01.T01 | MTR_1g068860 | 25.269 | 372 | 229 | 16 | 23 | 387 | 7 | 336 | 5.77e-20 | 91.3 |
MsG0680035810.01.T01 | MTR_2g028130 | 23.664 | 393 | 243 | 13 | 20 | 387 | 5 | 365 | 6.25e-20 | 91.7 |
MsG0680035810.01.T01 | MTR_2g426060 | 25.891 | 421 | 234 | 20 | 20 | 412 | 6 | 376 | 1.02e-19 | 90.9 |
MsG0680035810.01.T01 | MTR_1g068875 | 23.545 | 378 | 237 | 16 | 20 | 390 | 4 | 336 | 1.18e-19 | 90.5 |
MsG0680035810.01.T01 | MTR_4g133170 | 25.946 | 370 | 221 | 16 | 23 | 385 | 7 | 330 | 1.33e-19 | 90.5 |
MsG0680035810.01.T01 | MTR_2g021050 | 24.869 | 382 | 222 | 14 | 20 | 390 | 5 | 332 | 2.39e-19 | 89.4 |
MsG0680035810.01.T01 | MTR_5g070080 | 23.653 | 427 | 249 | 18 | 11 | 411 | 1 | 376 | 5.06e-19 | 88.6 |
MsG0680035810.01.T01 | MTR_3g013740 | 26.768 | 396 | 206 | 16 | 6 | 377 | 31 | 366 | 5.24e-19 | 89.0 |
MsG0680035810.01.T01 | MTR_2g031720 | 25.000 | 388 | 232 | 18 | 15 | 388 | 1 | 343 | 7.60e-19 | 88.2 |
MsG0680035810.01.T01 | MTR_2g028160 | 23.810 | 399 | 237 | 16 | 20 | 387 | 5 | 367 | 1.02e-18 | 87.8 |
MsG0680035810.01.T01 | MTR_2g021150 | 27.198 | 364 | 211 | 17 | 19 | 377 | 13 | 327 | 1.10e-18 | 87.4 |
MsG0680035810.01.T01 | MTR_2g026010 | 26.053 | 380 | 219 | 22 | 39 | 402 | 23 | 356 | 1.22e-18 | 87.4 |
MsG0680035810.01.T01 | MTR_3g009240 | 27.027 | 370 | 203 | 16 | 23 | 385 | 39 | 348 | 1.81e-18 | 87.0 |
MsG0680035810.01.T01 | MTR_6g065980 | 24.672 | 381 | 211 | 15 | 23 | 396 | 19 | 330 | 2.00e-18 | 86.7 |
MsG0680035810.01.T01 | MTR_3g014540 | 24.069 | 403 | 252 | 12 | 2 | 399 | 11 | 364 | 2.49e-18 | 86.7 |
MsG0680035810.01.T01 | MTR_2g028110 | 25.326 | 383 | 223 | 16 | 20 | 388 | 4 | 337 | 3.36e-18 | 86.3 |
MsG0680035810.01.T01 | MTR_3g006670 | 26.829 | 369 | 196 | 17 | 23 | 377 | 52 | 360 | 4.70e-18 | 85.9 |
MsG0680035810.01.T01 | MTR_4g061340 | 25.978 | 358 | 210 | 16 | 4 | 354 | 10 | 319 | 1.04e-17 | 84.7 |
MsG0680035810.01.T01 | MTR_0064s0160 | 24.312 | 436 | 262 | 17 | 3 | 415 | 31 | 421 | 1.97e-17 | 84.3 |
MsG0680035810.01.T01 | MTR_5g057790 | 25.220 | 341 | 191 | 14 | 23 | 354 | 49 | 334 | 2.39e-17 | 83.6 |
MsG0680035810.01.T01 | MTR_2g425980 | 23.810 | 420 | 245 | 18 | 20 | 412 | 5 | 376 | 3.66e-17 | 83.2 |
MsG0680035810.01.T01 | MTR_3g014570 | 24.802 | 379 | 232 | 13 | 2 | 377 | 11 | 339 | 3.99e-17 | 82.8 |
MsG0680035810.01.T01 | MTR_2g426090 | 24.863 | 366 | 220 | 18 | 28 | 376 | 14 | 341 | 4.19e-17 | 83.2 |
MsG0680035810.01.T01 | MTR_1g097330 | 25.519 | 337 | 190 | 13 | 20 | 350 | 16 | 297 | 8.15e-17 | 82.4 |
MsG0680035810.01.T01 | MTR_2g028140 | 25.061 | 407 | 219 | 19 | 20 | 387 | 5 | 364 | 8.16e-17 | 82.4 |
MsG0680035810.01.T01 | MTR_2g024100 | 24.427 | 393 | 231 | 17 | 21 | 387 | 8 | 360 | 1.03e-16 | 82.0 |
MsG0680035810.01.T01 | MTR_2g426020 | 23.709 | 426 | 247 | 19 | 15 | 412 | 1 | 376 | 1.12e-16 | 81.6 |
MsG0680035810.01.T01 | MTR_5g057710 | 24.629 | 337 | 198 | 14 | 23 | 354 | 49 | 334 | 3.78e-16 | 80.1 |
MsG0680035810.01.T01 | MTR_3g083010 | 23.267 | 404 | 236 | 17 | 20 | 387 | 6 | 371 | 5.81e-16 | 79.7 |
MsG0680035810.01.T01 | MTR_8g073550 | 27.165 | 254 | 130 | 8 | 4 | 242 | 3 | 216 | 6.03e-16 | 77.0 |
MsG0680035810.01.T01 | MTR_3g047580 | 38.028 | 142 | 64 | 6 | 13 | 151 | 7 | 127 | 7.79e-16 | 73.9 |
MsG0680035810.01.T01 | MTR_8g099460 | 23.896 | 385 | 238 | 14 | 17 | 387 | 2 | 345 | 1.19e-15 | 78.6 |
MsG0680035810.01.T01 | MTR_2g025420 | 23.430 | 414 | 233 | 19 | 15 | 387 | 1 | 371 | 2.27e-15 | 77.8 |
MsG0680035810.01.T01 | MTR_4g070550 | 24.190 | 401 | 225 | 17 | 20 | 387 | 5 | 359 | 2.58e-15 | 77.8 |
MsG0680035810.01.T01 | MTR_2g031680 | 24.346 | 382 | 233 | 17 | 15 | 387 | 1 | 335 | 2.62e-15 | 77.4 |
MsG0680035810.01.T01 | MTR_2g031640 | 24.021 | 383 | 216 | 18 | 23 | 385 | 9 | 336 | 2.85e-15 | 77.4 |
MsG0680035810.01.T01 | MTR_4g117780 | 27.953 | 254 | 126 | 10 | 20 | 265 | 11 | 215 | 3.20e-15 | 77.0 |
MsG0680035810.01.T01 | MTR_3g013770 | 26.374 | 364 | 207 | 14 | 23 | 377 | 36 | 347 | 4.52e-15 | 76.6 |
MsG0680035810.01.T01 | MTR_1g061330 | 22.481 | 387 | 239 | 12 | 20 | 395 | 4 | 340 | 5.16e-15 | 76.6 |
MsG0680035810.01.T01 | MTR_2g078900 | 22.280 | 386 | 228 | 15 | 1 | 377 | 14 | 336 | 5.93e-15 | 76.3 |
MsG0680035810.01.T01 | MTR_1g050305 | 51.282 | 78 | 33 | 2 | 316 | 388 | 21 | 98 | 1.16e-14 | 71.2 |
MsG0680035810.01.T01 | MTR_4g021785 | 23.438 | 384 | 226 | 15 | 13 | 387 | 2 | 326 | 1.80e-14 | 74.7 |
MsG0680035810.01.T01 | MTR_3g007410 | 27.434 | 339 | 172 | 18 | 28 | 351 | 60 | 339 | 1.83e-14 | 75.1 |
MsG0680035810.01.T01 | MTR_8g041440 | 38.393 | 112 | 49 | 2 | 8 | 112 | 3 | 101 | 2.18e-14 | 69.7 |
MsG0680035810.01.T01 | MTR_4g023080 | 23.768 | 345 | 197 | 12 | 13 | 351 | 2 | 286 | 2.56e-14 | 74.3 |
MsG0680035810.01.T01 | MTR_4g116330 | 22.642 | 424 | 256 | 15 | 2 | 411 | 6 | 371 | 7.49e-14 | 73.2 |
MsG0680035810.01.T01 | MTR_2g025960 | 22.789 | 294 | 169 | 15 | 119 | 387 | 5 | 265 | 8.04e-14 | 72.4 |
MsG0680035810.01.T01 | MTR_2g046830 | 24.260 | 338 | 197 | 16 | 19 | 350 | 24 | 308 | 9.53e-14 | 72.8 |
MsG0680035810.01.T01 | MTR_3g036290 | 23.823 | 361 | 201 | 15 | 23 | 377 | 25 | 317 | 1.13e-13 | 72.4 |
MsG0680035810.01.T01 | MTR_5g070130 | 21.823 | 417 | 261 | 15 | 14 | 415 | 5 | 371 | 1.25e-13 | 72.4 |
MsG0680035810.01.T01 | MTR_0115s0020 | 24.227 | 388 | 234 | 15 | 11 | 376 | 1 | 350 | 1.31e-13 | 72.4 |
MsG0680035810.01.T01 | MTR_1g009110 | 24.462 | 372 | 206 | 17 | 5 | 356 | 3 | 319 | 1.38e-13 | 72.0 |
MsG0680035810.01.T01 | MTR_4g023090 | 24.286 | 350 | 203 | 15 | 7 | 346 | 1 | 298 | 1.52e-13 | 72.0 |
MsG0680035810.01.T01 | MTR_2g055970 | 27.083 | 336 | 192 | 15 | 19 | 350 | 210 | 496 | 1.82e-13 | 72.4 |
MsG0680035810.01.T01 | MTR_3g097190 | 52.727 | 55 | 26 | 0 | 335 | 389 | 28 | 82 | 2.62e-13 | 68.6 |
MsG0680035810.01.T01 | MTR_8g013010 | 26.710 | 307 | 170 | 12 | 19 | 320 | 53 | 309 | 2.75e-13 | 70.9 |
MsG0680035810.01.T01 | MTR_4g024890 | 25.140 | 358 | 203 | 15 | 11 | 351 | 1 | 310 | 3.05e-13 | 71.2 |
MsG0680035810.01.T01 | MTR_3g047540 | 47.191 | 89 | 35 | 4 | 227 | 314 | 6 | 83 | 9.04e-13 | 64.3 |
MsG0680035810.01.T01 | MTR_4g055060 | 24.173 | 393 | 221 | 20 | 9 | 377 | 6 | 345 | 9.75e-13 | 69.7 |
MsG0680035810.01.T01 | MTR_5g070088 | 24.363 | 353 | 208 | 15 | 16 | 350 | 3 | 314 | 1.05e-12 | 69.7 |
MsG0680035810.01.T01 | MTR_4g122850 | 26.619 | 278 | 148 | 13 | 31 | 297 | 12 | 244 | 1.85e-12 | 68.9 |
MsG0680035810.01.T01 | MTR_3g007270 | 23.944 | 355 | 200 | 14 | 23 | 359 | 50 | 352 | 3.27e-12 | 68.2 |
MsG0680035810.01.T01 | MTR_1g056710 | 26.844 | 339 | 174 | 16 | 23 | 347 | 37 | 315 | 3.39e-12 | 68.2 |
MsG0680035810.01.T01 | MTR_2g046900 | 24.478 | 335 | 208 | 15 | 19 | 350 | 27 | 319 | 4.45e-12 | 67.8 |
MsG0680035810.01.T01 | MTR_4g031770 | 23.907 | 343 | 203 | 15 | 18 | 355 | 2 | 291 | 4.82e-12 | 67.4 |
MsG0680035810.01.T01 | MTR_3g036335 | 23.416 | 363 | 213 | 18 | 23 | 377 | 44 | 349 | 6.30e-12 | 67.0 |
MsG0680035810.01.T01 | MTR_1g068905 | 23.450 | 371 | 178 | 15 | 20 | 387 | 4 | 271 | 6.37e-12 | 66.6 |
MsG0680035810.01.T01 | MTR_2g046920 | 24.571 | 350 | 186 | 17 | 19 | 353 | 23 | 309 | 6.80e-12 | 67.0 |
MsG0680035810.01.T01 | MTR_7g070440 | 23.295 | 352 | 202 | 13 | 18 | 351 | 5 | 306 | 7.51e-12 | 67.0 |
MsG0680035810.01.T01 | MTR_5g049560 | 35.433 | 127 | 66 | 3 | 84 | 202 | 38 | 156 | 1.07e-11 | 65.5 |
MsG0680035810.01.T01 | MTR_4g023070 | 25.146 | 342 | 190 | 16 | 20 | 350 | 3 | 289 | 1.17e-11 | 66.2 |
MsG0680035810.01.T01 | MTR_4g116330 | 25.455 | 275 | 143 | 12 | 2 | 265 | 6 | 229 | 1.38e-11 | 65.9 |
MsG0680035810.01.T01 | MTR_8g467140 | 26.393 | 341 | 198 | 15 | 14 | 350 | 26 | 317 | 1.92e-11 | 65.5 |
MsG0680035810.01.T01 | MTR_5g057643 | 27.326 | 172 | 107 | 5 | 23 | 192 | 49 | 204 | 3.20e-11 | 63.9 |
MsG0680035810.01.T01 | MTR_8g032390 | 22.807 | 399 | 204 | 18 | 2 | 391 | 25 | 328 | 4.11e-11 | 64.7 |
MsG0680035810.01.T01 | MTR_0128s0020 | 22.676 | 441 | 258 | 19 | 2 | 411 | 4 | 392 | 4.63e-11 | 64.7 |
MsG0680035810.01.T01 | MTR_1g055135 | 22.997 | 387 | 232 | 16 | 8 | 376 | 1 | 339 | 6.89e-11 | 63.9 |
MsG0680035810.01.T01 | MTR_4g023120 | 24.476 | 286 | 163 | 11 | 20 | 299 | 3 | 241 | 7.25e-11 | 63.9 |
MsG0680035810.01.T01 | MTR_0760s0010 | 23.423 | 333 | 180 | 15 | 28 | 350 | 55 | 322 | 7.56e-11 | 63.9 |
MsG0680035810.01.T01 | MTR_5g010550 | 25.654 | 382 | 186 | 18 | 20 | 350 | 44 | 378 | 9.52e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035810.01.T01 | AT3G06240 | 23.786 | 412 | 219 | 19 | 23 | 391 | 39 | 398 | 1.42e-15 | 78.6 |
MsG0680035810.01.T01 | AT4G12560 | 22.798 | 386 | 243 | 13 | 20 | 390 | 4 | 349 | 9.93e-13 | 69.7 |
MsG0680035810.01.T01 | AT4G12560 | 22.798 | 386 | 243 | 13 | 20 | 390 | 4 | 349 | 9.93e-13 | 69.7 |
MsG0680035810.01.T01 | AT4G12560 | 22.798 | 386 | 243 | 13 | 20 | 390 | 4 | 349 | 9.93e-13 | 69.7 |
Find 78 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATATGAATATGATAATTT+TGG | 0.122724 | 6:-112651432 | MsG0680035810.01.T01:CDS |
AGGCTATATATCTCCCATTT+TGG | 0.208020 | 6:+112651144 | None:intergenic |
GAGATATTAATTCACCAAAA+TGG | 0.223250 | 6:-112651158 | MsG0680035810.01.T01:CDS |
TCGTAACCAGTTGATGAATT+TGG | 0.231210 | 6:+112651216 | None:intergenic |
TCAAAACAATCATCTACTTC+TGG | 0.256405 | 6:+112650931 | None:intergenic |
TTCGTTAACGCCCGTCTTCA+TGG | 0.279237 | 6:-112651303 | MsG0680035810.01.T01:CDS |
AACGCCCGTCTTCATGGATT+TGG | 0.323563 | 6:-112651297 | MsG0680035810.01.T01:CDS |
ATAAACTTGGCGGTGTTAAA+TGG | 0.327720 | 6:-112650892 | MsG0680035810.01.T01:CDS |
AGCTTGATTGTTTGGGTAGT+TGG | 0.330843 | 6:+112651390 | None:intergenic |
AACCAAGCACCTCAATCATT+TGG | 0.340170 | 6:+112650665 | None:intergenic |
GAAATTGTTTCTCATCGGTT+TGG | 0.350246 | 6:-112651180 | MsG0680035810.01.T01:CDS |
TGTTGACATGTCGTATTCTA+TGG | 0.356190 | 6:-112651094 | MsG0680035810.01.T01:CDS |
GCTTGATTGTTTGGGTAGTT+GGG | 0.372378 | 6:+112651391 | None:intergenic |
GTGGAAGAAGCTTGATTGTT+TGG | 0.373399 | 6:+112651382 | None:intergenic |
TAAACTACTTATTCCTCAAA+TGG | 0.380948 | 6:+112650583 | None:intergenic |
TGCACCTTCACATTGAGAAT+TGG | 0.381772 | 6:+112651620 | None:intergenic |
AAAGAGTTATCTTCTTCAAA+TGG | 0.388433 | 6:+112651501 | None:intergenic |
AATTATCATATTCATATAGA+TGG | 0.391520 | 6:+112651436 | None:intergenic |
GACGGTTGATTCATCGTCAC+TGG | 0.398444 | 6:+112651359 | None:intergenic |
AGAGGGAACCCGAGTCTATA+TGG | 0.401222 | 6:-112651064 | MsG0680035810.01.T01:CDS |
CAAAACAATCATCTACTTCT+GGG | 0.409634 | 6:+112650932 | None:intergenic |
AGATATTAATTCACCAAAAT+GGG | 0.413215 | 6:-112651157 | MsG0680035810.01.T01:CDS |
ATCGTGGATCAAACTCTTCA+TGG | 0.413723 | 6:-112650791 | MsG0680035810.01.T01:CDS |
ATATGGATGGTGTGTGTCAT+TGG | 0.414992 | 6:-112651047 | MsG0680035810.01.T01:CDS |
AAACGCTTGAAAGATTTAAG+AGG | 0.425978 | 6:+112651720 | None:intergenic |
GGAAAGCATTGTTCCATTTG+AGG | 0.427560 | 6:-112650596 | MsG0680035810.01.T01:CDS |
ATAAAACCAAATTCATCAAC+TGG | 0.430155 | 6:-112651222 | MsG0680035810.01.T01:CDS |
TATGCCGGTTGGACAATGTT+TGG | 0.434378 | 6:-112651001 | MsG0680035810.01.T01:CDS |
CCTATCGGAGTGGGGACAAA+GGG | 0.442789 | 6:-112650742 | MsG0680035810.01.T01:CDS |
ACCAAGCACCTCAATCATTT+GGG | 0.444957 | 6:+112650666 | None:intergenic |
TGGAAGAAGCTTGATTGTTT+GGG | 0.449335 | 6:+112651383 | None:intergenic |
TTGAATGTGTTTGTAAATCA+TGG | 0.449872 | 6:-112651698 | MsG0680035810.01.T01:CDS |
GATACCAAACATTGTCCAAC+CGG | 0.468176 | 6:+112650997 | None:intergenic |
CATTATAGTCATTTGTAACA+TGG | 0.494018 | 6:+112651268 | None:intergenic |
GAAAAGATAATGAAGTGGCT+TGG | 0.496468 | 6:-112650702 | MsG0680035810.01.T01:CDS |
TCAAAGAAATTGTTTCTCAT+CGG | 0.505189 | 6:-112651185 | MsG0680035810.01.T01:CDS |
CCTTACGTTGAGCGTCCTAT+CGG | 0.505399 | 6:-112650757 | MsG0680035810.01.T01:CDS |
CAAATGACTATAATGTCATT+CGG | 0.507052 | 6:-112651260 | MsG0680035810.01.T01:CDS |
CCCTTTGTCCCCACTCCGAT+AGG | 0.513186 | 6:+112650742 | None:intergenic |
CCGATAGGACGCTCAACGTA+AGG | 0.516335 | 6:+112650757 | None:intergenic |
ATGATATGAGATCAATGCTA+TGG | 0.518105 | 6:+112650867 | None:intergenic |
TTATCCAATTCTCAATGTGA+AGG | 0.532349 | 6:-112651624 | MsG0680035810.01.T01:CDS |
ACCCAAATGATTGAGGTGCT+TGG | 0.532373 | 6:-112650667 | MsG0680035810.01.T01:CDS |
CGCAAAGTGGATAAACTTGG+CGG | 0.533519 | 6:-112650902 | MsG0680035810.01.T01:CDS |
TGGATCAAACTCTTCATGGT+TGG | 0.542872 | 6:-112650787 | MsG0680035810.01.T01:CDS |
TCCTATCGGAGTGGGGACAA+AGG | 0.543727 | 6:-112650743 | MsG0680035810.01.T01:CDS |
TAGCGCAAAGTGGATAAACT+TGG | 0.560365 | 6:-112650905 | MsG0680035810.01.T01:CDS |
GAAGGACACTTCATTGCTCA+AGG | 0.564204 | 6:+112650969 | None:intergenic |
GTTGAGCGTCCTATCGGAGT+GGG | 0.567484 | 6:-112650751 | MsG0680035810.01.T01:CDS |
TTTGAGTACCCAAATGATTG+AGG | 0.574013 | 6:-112650674 | MsG0680035810.01.T01:CDS |
TTGGTTATACAGCAAAGAGT+TGG | 0.576664 | 6:-112650648 | MsG0680035810.01.T01:CDS |
AAAACAATCATCTACTTCTG+GGG | 0.578361 | 6:+112650933 | None:intergenic |
ATAACCAAATCCATGAAGAC+GGG | 0.587059 | 6:+112651293 | None:intergenic |
AATGGAGAAGGCAATATCAT+CGG | 0.594417 | 6:+112651755 | None:intergenic |
TATAACCAAATCCATGAAGA+CGG | 0.594593 | 6:+112651292 | None:intergenic |
AATATCATCGGATATATATG+TGG | 0.596831 | 6:+112651767 | None:intergenic |
CATAAGAAAAGATAATGAAG+TGG | 0.598750 | 6:-112650707 | MsG0680035810.01.T01:CDS |
CTCCTCAGTTACATTAGTGA+CGG | 0.598763 | 6:+112651341 | None:intergenic |
ACGGTTGATTCATCGTCACT+GGG | 0.603092 | 6:+112651360 | None:intergenic |
ACACACCATCCATATAGACT+CGG | 0.614078 | 6:+112651055 | None:intergenic |
TTGTATGATAATAAATTACG+AGG | 0.615195 | 6:-112650617 | MsG0680035810.01.T01:CDS |
AACTCGGTTTCAAAGAATCG+TGG | 0.617879 | 6:-112650807 | MsG0680035810.01.T01:CDS |
AAACAATCATCTACTTCTGG+GGG | 0.620086 | 6:+112650934 | None:intergenic |
GTATTCTATGGAACGTAGAG+AGG | 0.622781 | 6:-112651082 | MsG0680035810.01.T01:CDS |
GGAACCCGAGTCTATATGGA+TGG | 0.634610 | 6:-112651060 | MsG0680035810.01.T01:CDS |
GGTTGCTGCGATGAATGAAA+AGG | 0.636907 | 6:-112651796 | MsG0680035810.01.T01:CDS |
CGTTGAGCGTCCTATCGGAG+TGG | 0.637751 | 6:-112650752 | MsG0680035810.01.T01:CDS |
TATTCTATGGAACGTAGAGA+GGG | 0.648419 | 6:-112651081 | MsG0680035810.01.T01:CDS |
GATGAAGAAGAAGAAATCAG+TGG | 0.651564 | 6:-112651817 | MsG0680035810.01.T01:CDS |
CACACCATCCATATAGACTC+GGG | 0.652998 | 6:+112651056 | None:intergenic |
AATTCATCAACTGGTTACGA+TGG | 0.659945 | 6:-112651213 | MsG0680035810.01.T01:CDS |
GGACGCTCAACGTAAGGCAA+CGG | 0.667318 | 6:+112650763 | None:intergenic |
AACCGTCACTAATGTAACTG+AGG | 0.673930 | 6:-112651343 | MsG0680035810.01.T01:CDS |
GTTGATTCATCGTCACTGGG+TGG | 0.685808 | 6:+112651363 | None:intergenic |
CTATCGGAGTGGGGACAAAG+GGG | 0.689791 | 6:-112650741 | MsG0680035810.01.T01:CDS |
TCACTAATGTAACTGAGGAG+AGG | 0.695184 | 6:-112651338 | MsG0680035810.01.T01:CDS |
TTGAGCGTCCTATCGGAGTG+GGG | 0.697017 | 6:-112650750 | MsG0680035810.01.T01:CDS |
AATTGGATAAGAAATTGTAG+CGG | 0.721360 | 6:+112651637 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATGAATATGATAATTTT+GGG | - | Chr6:112650976-112650995 | MsG0680035810.01.T01:CDS | 10.0% |
!! | AATTATCATATTCATATAGA+TGG | + | Chr6:112650974-112650993 | None:intergenic | 15.0% |
!! | ACAATATAAAAAATATATGC+CGG | - | Chr6:112651391-112651410 | MsG0680035810.01.T01:CDS | 15.0% |
!!! | CTATATGAATATGATAATTT+TGG | - | Chr6:112650975-112650994 | MsG0680035810.01.T01:CDS | 15.0% |
!! | AGATATTAATTCACCAAAAT+GGG | - | Chr6:112651250-112651269 | MsG0680035810.01.T01:CDS | 20.0% |
!! | TTGTATGATAATAAATTACG+AGG | - | Chr6:112651790-112651809 | MsG0680035810.01.T01:CDS | 20.0% |
!!! | ACTTTTCATGTATCAATTTT+GGG | - | Chr6:112651575-112651594 | MsG0680035810.01.T01:CDS | 20.0% |
!!! | GATAACTCTTTTTATATTGT+TGG | - | Chr6:112650918-112650937 | MsG0680035810.01.T01:CDS | 20.0% |
!!! | TACTTTTCATGTATCAATTT+TGG | - | Chr6:112651574-112651593 | MsG0680035810.01.T01:CDS | 20.0% |
!!! | TCTTTTTATATTGTTGGTTT+TGG | - | Chr6:112650924-112650943 | MsG0680035810.01.T01:CDS | 20.0% |
! | AAAGAGTTATCTTCTTCAAA+TGG | + | Chr6:112650909-112650928 | None:intergenic | 25.0% |
! | AATATCATCGGATATATATG+TGG | + | Chr6:112650643-112650662 | None:intergenic | 25.0% |
! | AATTGGATAAGAAATTGTAG+CGG | + | Chr6:112650773-112650792 | None:intergenic | 25.0% |
! | ATAAAACCAAATTCATCAAC+TGG | - | Chr6:112651185-112651204 | MsG0680035810.01.T01:CDS | 25.0% |
! | CAAATGACTATAATGTCATT+CGG | - | Chr6:112651147-112651166 | MsG0680035810.01.T01:CDS | 25.0% |
! | CATAAGAAAAGATAATGAAG+TGG | - | Chr6:112651700-112651719 | MsG0680035810.01.T01:CDS | 25.0% |
! | CATTATAGTCATTTGTAACA+TGG | + | Chr6:112651142-112651161 | None:intergenic | 25.0% |
! | GAGATATTAATTCACCAAAA+TGG | - | Chr6:112651249-112651268 | MsG0680035810.01.T01:CDS | 25.0% |
! | TATAAAAAATATATGCCGGT+TGG | - | Chr6:112651395-112651414 | MsG0680035810.01.T01:CDS | 25.0% |
! | TTGAATGTGTTTGTAAATCA+TGG | - | Chr6:112650709-112650728 | MsG0680035810.01.T01:CDS | 25.0% |
!! | TCAAAGAAATTGTTTCTCAT+CGG | - | Chr6:112651222-112651241 | MsG0680035810.01.T01:CDS | 25.0% |
!!! | GAAGTTTTGTATTCTTTTTC+TGG | - | Chr6:112650843-112650862 | MsG0680035810.01.T01:CDS | 25.0% |
!!! | TTTTGTATTCTTTTTCTGGT+GGG | - | Chr6:112650847-112650866 | MsG0680035810.01.T01:CDS | 25.0% |
AAAACAATCATCTACTTCTG+GGG | + | Chr6:112651477-112651496 | None:intergenic | 30.0% | |
AAACGCTTGAAAGATTTAAG+AGG | + | Chr6:112650690-112650709 | None:intergenic | 30.0% | |
ATAGCCTAAAAAGTAATTCG+TGG | - | Chr6:112651279-112651298 | MsG0680035810.01.T01:CDS | 30.0% | |
ATGATATGAGATCAATGCTA+TGG | + | Chr6:112651543-112651562 | None:intergenic | 30.0% | |
CAAAACAATCATCTACTTCT+GGG | + | Chr6:112651478-112651497 | None:intergenic | 30.0% | |
TATAACCAAATCCATGAAGA+CGG | + | Chr6:112651118-112651137 | None:intergenic | 30.0% | |
TCAAAACAATCATCTACTTC+TGG | + | Chr6:112651479-112651498 | None:intergenic | 30.0% | |
TTATCCAATTCTCAATGTGA+AGG | - | Chr6:112650783-112650802 | MsG0680035810.01.T01:CDS | 30.0% | |
! | AGTTTTCAATTACAAAGAGC+AGG | + | Chr6:112650818-112650837 | None:intergenic | 30.0% |
! | GTTTTCAATTACAAAGAGCA+GGG | + | Chr6:112650817-112650836 | None:intergenic | 30.0% |
! | GTTTTGTATTCTTTTTCTGG+TGG | - | Chr6:112650846-112650865 | MsG0680035810.01.T01:CDS | 30.0% |
! | TTTTCAATTACAAAGAGCAG+GGG | + | Chr6:112650816-112650835 | None:intergenic | 30.0% |
!! | AAGAGGTAATTTTGAGAGAA+TGG | + | Chr6:112650673-112650692 | None:intergenic | 30.0% |
!! | ATTTTGGGAAAATTGTACTG+TGG | - | Chr6:112650991-112651010 | MsG0680035810.01.T01:CDS | 30.0% |
!! | TAATTTTGAGAGAATGGAGA+AGG | + | Chr6:112650667-112650686 | None:intergenic | 30.0% |
!!! | GTTGGTTTTGGTAGTATTAA+TGG | - | Chr6:112650936-112650955 | MsG0680035810.01.T01:CDS | 30.0% |
!!! | TTCTCCACGAATTACTTTTT+AGG | + | Chr6:112651286-112651305 | None:intergenic | 30.0% |
AAACAATCATCTACTTCTGG+GGG | + | Chr6:112651476-112651495 | None:intergenic | 35.0% | |
AATGGAGAAGGCAATATCAT+CGG | + | Chr6:112650655-112650674 | None:intergenic | 35.0% | |
AATTCATCAACTGGTTACGA+TGG | - | Chr6:112651194-112651213 | MsG0680035810.01.T01:CDS | 35.0% | |
ATAACCAAATCCATGAAGAC+GGG | + | Chr6:112651117-112651136 | None:intergenic | 35.0% | |
GAAAAGATAATGAAGTGGCT+TGG | - | Chr6:112651705-112651724 | MsG0680035810.01.T01:CDS | 35.0% | |
TATTCTATGGAACGTAGAGA+GGG | - | Chr6:112651326-112651345 | MsG0680035810.01.T01:CDS | 35.0% | |
TGGAAGAAGCTTGATTGTTT+GGG | + | Chr6:112651027-112651046 | None:intergenic | 35.0% | |
TGTTGACATGTCGTATTCTA+TGG | - | Chr6:112651313-112651332 | MsG0680035810.01.T01:CDS | 35.0% | |
TTGGTTATACAGCAAAGAGT+TGG | - | Chr6:112651759-112651778 | MsG0680035810.01.T01:CDS | 35.0% | |
TTTGAGTACCCAAATGATTG+AGG | - | Chr6:112651733-112651752 | MsG0680035810.01.T01:CDS | 35.0% | |
! | AGGCTATATATCTCCCATTT+TGG | + | Chr6:112651266-112651285 | None:intergenic | 35.0% |
! | ATAAACTTGGCGGTGTTAAA+TGG | - | Chr6:112651515-112651534 | MsG0680035810.01.T01:CDS | 35.0% |
! | GAAATTGTTTCTCATCGGTT+TGG | - | Chr6:112651227-112651246 | MsG0680035810.01.T01:CDS | 35.0% |
!! | GTATCAATTTTGGGTCAACT+CGG | - | Chr6:112651584-112651603 | MsG0680035810.01.T01:CDS | 35.0% |
!! | TCGTAACCAGTTGATGAATT+TGG | + | Chr6:112651194-112651213 | None:intergenic | 35.0% |
AACCAAGCACCTCAATCATT+TGG | + | Chr6:112651745-112651764 | None:intergenic | 40.0% | |
AACCGTCACTAATGTAACTG+AGG | - | Chr6:112651064-112651083 | MsG0680035810.01.T01:CDS | 40.0% | |
AACTCGGTTTCAAAGAATCG+TGG | - | Chr6:112651600-112651619 | MsG0680035810.01.T01:CDS | 40.0% | |
ACACACCATCCATATAGACT+CGG | + | Chr6:112651355-112651374 | None:intergenic | 40.0% | |
ACCAAGCACCTCAATCATTT+GGG | + | Chr6:112651744-112651763 | None:intergenic | 40.0% | |
AGCTTGATTGTTTGGGTAGT+TGG | + | Chr6:112651020-112651039 | None:intergenic | 40.0% | |
ATATGGATGGTGTGTGTCAT+TGG | - | Chr6:112651360-112651379 | MsG0680035810.01.T01:CDS | 40.0% | |
ATCGTGGATCAAACTCTTCA+TGG | - | Chr6:112651616-112651635 | MsG0680035810.01.T01:CDS | 40.0% | |
CTCCTCAGTTACATTAGTGA+CGG | + | Chr6:112651069-112651088 | None:intergenic | 40.0% | |
GATACCAAACATTGTCCAAC+CGG | + | Chr6:112651413-112651432 | None:intergenic | 40.0% | |
GCTTGATTGTTTGGGTAGTT+GGG | + | Chr6:112651019-112651038 | None:intergenic | 40.0% | |
GTATTCTATGGAACGTAGAG+AGG | - | Chr6:112651325-112651344 | MsG0680035810.01.T01:CDS | 40.0% | |
GTGGAAGAAGCTTGATTGTT+TGG | + | Chr6:112651028-112651047 | None:intergenic | 40.0% | |
TAGCGCAAAGTGGATAAACT+TGG | - | Chr6:112651502-112651521 | MsG0680035810.01.T01:CDS | 40.0% | |
TCACTAATGTAACTGAGGAG+AGG | - | Chr6:112651069-112651088 | MsG0680035810.01.T01:CDS | 40.0% | |
TGCACCTTCACATTGAGAAT+TGG | + | Chr6:112650790-112650809 | None:intergenic | 40.0% | |
TGGATCAAACTCTTCATGGT+TGG | - | Chr6:112651620-112651639 | MsG0680035810.01.T01:CDS | 40.0% | |
!! | GGAAAGCATTGTTCCATTTG+AGG | - | Chr6:112651811-112651830 | MsG0680035810.01.T01:CDS | 40.0% |
!! | GTTTTGATGTTAGCGCAAAG+TGG | - | Chr6:112651492-112651511 | MsG0680035810.01.T01:CDS | 40.0% |
!! | TGTATTCTTTTTCTGGTGGG+AGG | - | Chr6:112650850-112650869 | MsG0680035810.01.T01:CDS | 40.0% |
CACACCATCCATATAGACTC+GGG | + | Chr6:112651354-112651373 | None:intergenic | 45.0% | |
CGCAAAGTGGATAAACTTGG+CGG | - | Chr6:112651505-112651524 | MsG0680035810.01.T01:CDS | 45.0% | |
GAAGGACACTTCATTGCTCA+AGG | + | Chr6:112651441-112651460 | None:intergenic | 45.0% | |
GGTTGCTGCGATGAATGAAA+AGG | - | Chr6:112650611-112650630 | MsG0680035810.01.T01:CDS | 45.0% | |
! | ACCCAAATGATTGAGGTGCT+TGG | - | Chr6:112651740-112651759 | MsG0680035810.01.T01:CDS | 45.0% |
! | ACGGTTGATTCATCGTCACT+GGG | + | Chr6:112651050-112651069 | None:intergenic | 45.0% |
! | ATCATCTACTTCTGGGGGAA+TGG | + | Chr6:112651471-112651490 | None:intergenic | 45.0% |
! | TATGCCGGTTGGACAATGTT+TGG | - | Chr6:112651406-112651425 | MsG0680035810.01.T01:CDS | 45.0% |
! | TCATCTACTTCTGGGGGAAT+GGG | + | Chr6:112651470-112651489 | None:intergenic | 45.0% |
AACGCCCGTCTTCATGGATT+TGG | - | Chr6:112651110-112651129 | MsG0680035810.01.T01:CDS | 50.0% | |
AGAGGGAACCCGAGTCTATA+TGG | - | Chr6:112651343-112651362 | MsG0680035810.01.T01:CDS | 50.0% | |
CCTTACGTTGAGCGTCCTAT+CGG | - | Chr6:112651650-112651669 | MsG0680035810.01.T01:CDS | 50.0% | |
GGAACCCGAGTCTATATGGA+TGG | - | Chr6:112651347-112651366 | MsG0680035810.01.T01:CDS | 50.0% | |
TTCGTTAACGCCCGTCTTCA+TGG | - | Chr6:112651104-112651123 | MsG0680035810.01.T01:CDS | 50.0% | |
! | GACGGTTGATTCATCGTCAC+TGG | + | Chr6:112651051-112651070 | None:intergenic | 50.0% |
! | GTTGATTCATCGTCACTGGG+TGG | + | Chr6:112651047-112651066 | None:intergenic | 50.0% |
CCGATAGGACGCTCAACGTA+AGG | + | Chr6:112651653-112651672 | None:intergenic | 55.0% | |
CCTATCGGAGTGGGGACAAA+GGG | - | Chr6:112651665-112651684 | MsG0680035810.01.T01:CDS | 55.0% | |
CTATCGGAGTGGGGACAAAG+GGG | - | Chr6:112651666-112651685 | MsG0680035810.01.T01:CDS | 55.0% | |
GGACGCTCAACGTAAGGCAA+CGG | + | Chr6:112651647-112651666 | None:intergenic | 55.0% | |
GTTGAGCGTCCTATCGGAGT+GGG | - | Chr6:112651656-112651675 | MsG0680035810.01.T01:CDS | 55.0% | |
TCCTATCGGAGTGGGGACAA+AGG | - | Chr6:112651664-112651683 | MsG0680035810.01.T01:CDS | 55.0% | |
TTGAGCGTCCTATCGGAGTG+GGG | - | Chr6:112651657-112651676 | MsG0680035810.01.T01:CDS | 55.0% | |
! | TGGGGGAATGGGTGTTGTGA+AGG | + | Chr6:112651459-112651478 | None:intergenic | 55.0% |
CCCTTTGTCCCCACTCCGAT+AGG | + | Chr6:112651668-112651687 | None:intergenic | 60.0% | |
CGTTGAGCGTCCTATCGGAG+TGG | - | Chr6:112651655-112651674 | MsG0680035810.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 112650591 | 112651838 | 112650591 | ID=MsG0680035810.01;Name=MsG0680035810.01 |
Chr6 | mRNA | 112650591 | 112651838 | 112650591 | ID=MsG0680035810.01.T01;Parent=MsG0680035810.01;Name=MsG0680035810.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|415 |
Chr6 | exon | 112650591 | 112651838 | 112650591 | ID=MsG0680035810.01.T01:exon:9622;Parent=MsG0680035810.01.T01 |
Chr6 | CDS | 112650591 | 112651838 | 112650591 | ID=MsG0680035810.01.T01:cds;Parent=MsG0680035810.01.T01 |
Gene Sequence |
Protein sequence |