Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035808.01.T01 | AES76989.1 | 75.505 | 396 | 77 | 6 | 38 | 415 | 29 | 422 | 0 | 577 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035808.01.T01 | Q9SU30 | 23.057 | 386 | 242 | 13 | 20 | 390 | 4 | 349 | 1.82E-12 | 72 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035808.01.T01 | G7KHZ4 | 75.505 | 396 | 77 | 6 | 38 | 415 | 29 | 422 | 0.0 | 577 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035808.01.T01 | MTR_6g090250 | 75.505 | 396 | 77 | 6 | 38 | 415 | 29 | 422 | 0.0 | 577 |
MsG0680035808.01.T01 | MTR_6g079810 | 58.894 | 416 | 156 | 8 | 1 | 412 | 54 | 458 | 1.23e-155 | 448 |
MsG0680035808.01.T01 | MTR_0134s0060 | 57.828 | 396 | 153 | 8 | 8 | 394 | 1 | 391 | 3.26e-151 | 434 |
MsG0680035808.01.T01 | MTR_6g086825 | 57.831 | 415 | 144 | 10 | 12 | 414 | 62 | 457 | 2.60e-144 | 419 |
MsG0680035808.01.T01 | MTR_6g079770 | 57.488 | 414 | 160 | 9 | 8 | 412 | 6 | 412 | 9.19e-144 | 416 |
MsG0680035808.01.T01 | MTR_4g028510 | 57.005 | 414 | 149 | 10 | 8 | 412 | 4 | 397 | 6.77e-142 | 412 |
MsG0680035808.01.T01 | MTR_4g028660 | 54.458 | 415 | 161 | 10 | 8 | 415 | 4 | 397 | 3.11e-137 | 399 |
MsG0680035808.01.T01 | MTR_4g027450 | 54.458 | 415 | 161 | 10 | 8 | 415 | 4 | 397 | 3.11e-137 | 399 |
MsG0680035808.01.T01 | MTR_6g080680 | 55.000 | 420 | 149 | 9 | 1 | 411 | 1 | 389 | 9.52e-136 | 395 |
MsG0680035808.01.T01 | MTR_0054s0090 | 53.901 | 423 | 166 | 11 | 1 | 414 | 1 | 403 | 2.72e-134 | 391 |
MsG0680035808.01.T01 | MTR_4g028680 | 54.831 | 414 | 156 | 12 | 8 | 412 | 4 | 395 | 2.36e-133 | 389 |
MsG0680035808.01.T01 | MTR_4g130330 | 53.713 | 404 | 160 | 8 | 16 | 412 | 3 | 386 | 1.20e-132 | 387 |
MsG0680035808.01.T01 | MTR_0054s0100 | 53.494 | 415 | 168 | 10 | 9 | 414 | 7 | 405 | 1.22e-132 | 387 |
MsG0680035808.01.T01 | MTR_6g090180 | 54.374 | 423 | 163 | 11 | 3 | 415 | 34 | 436 | 4.85e-132 | 387 |
MsG0680035808.01.T01 | MTR_6g078010 | 56.510 | 361 | 121 | 6 | 57 | 412 | 1 | 330 | 8.00e-132 | 383 |
MsG0680035808.01.T01 | MTR_6g478230 | 51.963 | 433 | 147 | 12 | 4 | 414 | 11 | 404 | 1.02e-128 | 377 |
MsG0680035808.01.T01 | MTR_4g028750 | 53.181 | 393 | 155 | 12 | 8 | 392 | 4 | 375 | 6.01e-123 | 362 |
MsG0680035808.01.T01 | MTR_6g090260 | 78.010 | 191 | 41 | 1 | 225 | 415 | 73 | 262 | 3.73e-105 | 311 |
MsG0680035808.01.T01 | MTR_6g090260 | 77.465 | 71 | 16 | 0 | 1 | 71 | 1 | 71 | 1.51e-28 | 113 |
MsG0680035808.01.T01 | MTR_0129s0070 | 45.606 | 421 | 195 | 12 | 1 | 415 | 2 | 394 | 2.98e-103 | 312 |
MsG0680035808.01.T01 | MTR_6g461660 | 44.836 | 426 | 196 | 12 | 1 | 415 | 1 | 398 | 6.20e-102 | 308 |
MsG0680035808.01.T01 | MTR_8g063440 | 45.012 | 411 | 187 | 11 | 8 | 412 | 1 | 378 | 3.58e-101 | 306 |
MsG0680035808.01.T01 | MTR_5g097220 | 44.125 | 417 | 214 | 9 | 7 | 415 | 1 | 406 | 4.30e-101 | 306 |
MsG0680035808.01.T01 | MTR_0129s0120 | 45.606 | 421 | 195 | 12 | 1 | 415 | 2 | 394 | 5.80e-101 | 306 |
MsG0680035808.01.T01 | MTR_2g021800 | 44.203 | 414 | 192 | 11 | 17 | 409 | 13 | 408 | 1.47e-99 | 303 |
MsG0680035808.01.T01 | MTR_5g097680 | 43.578 | 436 | 204 | 11 | 4 | 412 | 2 | 422 | 3.43e-99 | 302 |
MsG0680035808.01.T01 | MTR_2g038680 | 44.028 | 427 | 198 | 14 | 5 | 412 | 2 | 406 | 3.47e-99 | 302 |
MsG0680035808.01.T01 | MTR_2g022000 | 46.076 | 395 | 179 | 10 | 17 | 391 | 13 | 393 | 8.43e-99 | 301 |
MsG0680035808.01.T01 | MTR_7g104710 | 52.381 | 336 | 100 | 7 | 4 | 330 | 2 | 286 | 1.32e-98 | 297 |
MsG0680035808.01.T01 | MTR_6g079790 | 54.348 | 322 | 122 | 8 | 99 | 413 | 2 | 305 | 3.43e-98 | 296 |
MsG0680035808.01.T01 | MTR_7g023800 | 46.703 | 364 | 132 | 7 | 59 | 415 | 1 | 309 | 8.54e-98 | 295 |
MsG0680035808.01.T01 | MTR_5g097330 | 43.488 | 430 | 190 | 14 | 7 | 415 | 4 | 401 | 1.08e-93 | 288 |
MsG0680035808.01.T01 | MTR_0129s0050 | 44.310 | 413 | 194 | 13 | 13 | 409 | 8 | 400 | 6.97e-93 | 286 |
MsG0680035808.01.T01 | MTR_5g037680 | 42.993 | 421 | 171 | 12 | 16 | 411 | 4 | 380 | 1.30e-92 | 286 |
MsG0680035808.01.T01 | MTR_4g102410 | 43.056 | 432 | 197 | 15 | 3 | 414 | 45 | 447 | 2.33e-92 | 285 |
MsG0680035808.01.T01 | MTR_5g069390 | 41.549 | 426 | 191 | 13 | 14 | 413 | 20 | 413 | 3.22e-92 | 287 |
MsG0680035808.01.T01 | MTR_2g021950 | 42.823 | 418 | 196 | 15 | 8 | 412 | 5 | 392 | 5.04e-92 | 283 |
MsG0680035808.01.T01 | MTR_6g087620 | 50.617 | 324 | 112 | 8 | 87 | 407 | 1 | 279 | 9.60e-91 | 276 |
MsG0680035808.01.T01 | MTR_4g055820 | 45.000 | 380 | 168 | 12 | 9 | 371 | 4 | 359 | 6.97e-90 | 276 |
MsG0680035808.01.T01 | MTR_3g011120 | 43.873 | 408 | 182 | 15 | 7 | 406 | 1 | 369 | 1.64e-89 | 276 |
MsG0680035808.01.T01 | MTR_5g096630 | 42.155 | 427 | 205 | 14 | 8 | 414 | 7 | 411 | 1.46e-88 | 275 |
MsG0680035808.01.T01 | MTR_1g007450 | 44.110 | 399 | 191 | 13 | 8 | 396 | 1 | 377 | 2.66e-88 | 274 |
MsG0680035808.01.T01 | MTR_8g012090 | 43.377 | 385 | 153 | 9 | 9 | 384 | 6 | 334 | 8.00e-88 | 270 |
MsG0680035808.01.T01 | MTR_7g017130 | 42.993 | 421 | 204 | 15 | 1 | 413 | 1 | 393 | 2.29e-87 | 271 |
MsG0680035808.01.T01 | MTR_2g104340 | 41.429 | 420 | 201 | 12 | 7 | 411 | 1 | 390 | 3.29e-87 | 271 |
MsG0680035808.01.T01 | MTR_2g065840 | 40.191 | 418 | 203 | 12 | 8 | 412 | 1 | 384 | 6.29e-87 | 270 |
MsG0680035808.01.T01 | MTR_1g007410 | 42.961 | 412 | 194 | 19 | 2 | 399 | 6 | 390 | 3.23e-86 | 268 |
MsG0680035808.01.T01 | MTR_0831s0010 | 41.163 | 430 | 186 | 17 | 4 | 412 | 33 | 416 | 6.54e-86 | 268 |
MsG0680035808.01.T01 | MTR_7g017170 | 44.221 | 398 | 188 | 14 | 1 | 390 | 1 | 372 | 7.09e-86 | 268 |
MsG0680035808.01.T01 | MTR_6g070880 | 56.349 | 252 | 99 | 6 | 3 | 249 | 16 | 261 | 2.18e-85 | 261 |
MsG0680035808.01.T01 | MTR_6g071420 | 56.349 | 252 | 99 | 6 | 3 | 249 | 16 | 261 | 2.18e-85 | 261 |
MsG0680035808.01.T01 | MTR_4g117550 | 41.106 | 416 | 187 | 13 | 4 | 411 | 2 | 367 | 2.81e-85 | 265 |
MsG0680035808.01.T01 | MTR_2g065860 | 40.580 | 414 | 206 | 11 | 8 | 412 | 1 | 383 | 3.33e-85 | 265 |
MsG0680035808.01.T01 | MTR_2g021770 | 39.202 | 426 | 208 | 12 | 11 | 412 | 4 | 402 | 6.15e-85 | 265 |
MsG0680035808.01.T01 | MTR_5g092850 | 42.615 | 413 | 202 | 14 | 15 | 415 | 11 | 400 | 1.70e-84 | 264 |
MsG0680035808.01.T01 | MTR_8g467670 | 41.688 | 391 | 180 | 12 | 14 | 395 | 8 | 359 | 2.05e-83 | 261 |
MsG0680035808.01.T01 | MTR_8g064890 | 39.901 | 406 | 207 | 9 | 13 | 412 | 9 | 383 | 2.53e-83 | 260 |
MsG0680035808.01.T01 | MTR_5g096910 | 40.758 | 422 | 193 | 14 | 9 | 412 | 6 | 388 | 3.40e-83 | 260 |
MsG0680035808.01.T01 | MTR_5g074850 | 43.250 | 400 | 191 | 14 | 7 | 391 | 22 | 400 | 3.65e-83 | 273 |
MsG0680035808.01.T01 | MTR_5g097350 | 42.327 | 404 | 173 | 13 | 29 | 415 | 25 | 385 | 7.09e-82 | 256 |
MsG0680035808.01.T01 | MTR_8g464770 | 40.534 | 412 | 199 | 11 | 8 | 411 | 1 | 374 | 1.58e-81 | 255 |
MsG0680035808.01.T01 | MTR_8g033140 | 39.675 | 431 | 203 | 13 | 13 | 413 | 11 | 414 | 4.94e-81 | 255 |
MsG0680035808.01.T01 | MTR_2g034700 | 41.404 | 413 | 187 | 12 | 13 | 415 | 7 | 374 | 1.97e-80 | 252 |
MsG0680035808.01.T01 | MTR_5g059430 | 40.000 | 435 | 196 | 14 | 14 | 414 | 20 | 423 | 7.96e-80 | 253 |
MsG0680035808.01.T01 | MTR_7g069550 | 40.602 | 399 | 198 | 12 | 7 | 390 | 1 | 375 | 1.76e-79 | 251 |
MsG0680035808.01.T01 | MTR_2g066200 | 39.765 | 425 | 198 | 16 | 8 | 414 | 1 | 385 | 2.62e-78 | 248 |
MsG0680035808.01.T01 | MTR_8g039500 | 41.495 | 388 | 174 | 15 | 8 | 384 | 1 | 346 | 3.83e-78 | 246 |
MsG0680035808.01.T01 | MTR_2g104280 | 40.347 | 404 | 194 | 13 | 7 | 388 | 1 | 379 | 6.40e-78 | 247 |
MsG0680035808.01.T01 | MTR_8g033090 | 39.261 | 433 | 214 | 12 | 7 | 414 | 1 | 409 | 2.76e-77 | 246 |
MsG0680035808.01.T01 | MTR_2g066170 | 40.580 | 414 | 204 | 16 | 8 | 412 | 1 | 381 | 1.83e-76 | 243 |
MsG0680035808.01.T01 | MTR_8g046310 | 39.387 | 424 | 190 | 16 | 7 | 413 | 1 | 374 | 2.39e-76 | 242 |
MsG0680035808.01.T01 | MTR_7g017040 | 41.093 | 421 | 208 | 12 | 7 | 415 | 4 | 396 | 3.13e-76 | 242 |
MsG0680035808.01.T01 | MTR_6g079730 | 80.282 | 142 | 26 | 1 | 274 | 415 | 9 | 148 | 3.26e-76 | 233 |
MsG0680035808.01.T01 | MTR_8g018110 | 38.263 | 426 | 213 | 12 | 7 | 414 | 1 | 394 | 4.82e-76 | 242 |
MsG0680035808.01.T01 | MTR_5g075370 | 41.162 | 396 | 198 | 17 | 16 | 395 | 4 | 380 | 1.20e-75 | 251 |
MsG0680035808.01.T01 | MTR_8g041270 | 40.793 | 429 | 198 | 18 | 8 | 411 | 3 | 400 | 1.79e-75 | 241 |
MsG0680035808.01.T01 | MTR_5g092860 | 42.192 | 365 | 165 | 11 | 38 | 391 | 20 | 349 | 4.98e-75 | 238 |
MsG0680035808.01.T01 | MTR_1g053510 | 37.674 | 430 | 214 | 12 | 8 | 413 | 3 | 402 | 5.53e-75 | 239 |
MsG0680035808.01.T01 | MTR_7g079640 | 39.547 | 397 | 177 | 13 | 7 | 388 | 1 | 349 | 2.01e-74 | 237 |
MsG0680035808.01.T01 | MTR_2g066150 | 39.618 | 419 | 179 | 16 | 8 | 414 | 1 | 357 | 7.90e-74 | 235 |
MsG0680035808.01.T01 | MTR_5g024260 | 41.310 | 397 | 180 | 14 | 13 | 388 | 15 | 379 | 1.72e-73 | 236 |
MsG0680035808.01.T01 | MTR_4g014370 | 37.931 | 435 | 210 | 15 | 10 | 414 | 2 | 406 | 6.36e-72 | 231 |
MsG0680035808.01.T01 | MTR_5g064700 | 39.740 | 385 | 179 | 14 | 59 | 412 | 1 | 363 | 1.14e-71 | 229 |
MsG0680035808.01.T01 | MTR_2g064950 | 40.355 | 394 | 188 | 14 | 11 | 388 | 1 | 363 | 2.92e-71 | 229 |
MsG0680035808.01.T01 | MTR_8g033110 | 37.727 | 440 | 214 | 15 | 7 | 414 | 1 | 412 | 2.16e-70 | 228 |
MsG0680035808.01.T01 | MTR_5g043605 | 35.593 | 413 | 181 | 8 | 2 | 413 | 7 | 335 | 9.93e-70 | 224 |
MsG0680035808.01.T01 | MTR_8g063330 | 38.583 | 381 | 183 | 14 | 8 | 370 | 1 | 348 | 2.36e-69 | 227 |
MsG0680035808.01.T01 | MTR_5g072060 | 40.731 | 383 | 176 | 13 | 19 | 390 | 5 | 347 | 6.89e-69 | 229 |
MsG0680035808.01.T01 | MTR_5g091140 | 38.702 | 416 | 192 | 15 | 1 | 399 | 30 | 399 | 1.33e-68 | 223 |
MsG0680035808.01.T01 | MTR_8g046200 | 35.778 | 450 | 214 | 13 | 7 | 413 | 1 | 418 | 7.05e-68 | 221 |
MsG0680035808.01.T01 | MTR_7g111700 | 37.500 | 424 | 189 | 12 | 1 | 412 | 1 | 360 | 7.43e-67 | 217 |
MsG0680035808.01.T01 | MTR_8g032980 | 36.136 | 440 | 220 | 15 | 9 | 413 | 4 | 417 | 1.60e-65 | 215 |
MsG0680035808.01.T01 | MTR_4g007940 | 39.091 | 330 | 155 | 10 | 87 | 401 | 28 | 326 | 2.37e-65 | 213 |
MsG0680035808.01.T01 | MTR_8g046220 | 36.261 | 444 | 204 | 16 | 7 | 413 | 1 | 402 | 2.73e-65 | 214 |
MsG0680035808.01.T01 | MTR_8g013000 | 40.921 | 369 | 180 | 13 | 19 | 373 | 9 | 353 | 5.83e-65 | 213 |
MsG0680035808.01.T01 | MTR_6g465360 | 52.119 | 236 | 98 | 10 | 3 | 229 | 47 | 276 | 1.22e-63 | 206 |
MsG0680035808.01.T01 | MTR_1g007430 | 41.127 | 355 | 164 | 11 | 31 | 375 | 7 | 326 | 6.92e-63 | 206 |
MsG0680035808.01.T01 | MTR_8g064790 | 34.901 | 404 | 180 | 12 | 13 | 412 | 8 | 332 | 1.22e-62 | 205 |
MsG0680035808.01.T01 | MTR_5g022850 | 38.281 | 384 | 158 | 15 | 18 | 390 | 14 | 329 | 1.24e-61 | 203 |
MsG0680035808.01.T01 | MTR_5g074800 | 38.968 | 349 | 181 | 12 | 59 | 397 | 1 | 327 | 5.47e-61 | 201 |
MsG0680035808.01.T01 | MTR_8g063370 | 34.300 | 414 | 231 | 11 | 2 | 409 | 6 | 384 | 2.35e-60 | 201 |
MsG0680035808.01.T01 | MTR_1g098180 | 35.646 | 418 | 189 | 13 | 11 | 413 | 10 | 362 | 2.67e-60 | 200 |
MsG0680035808.01.T01 | MTR_7g016930 | 40.108 | 369 | 175 | 13 | 8 | 373 | 5 | 330 | 1.94e-59 | 197 |
MsG0680035808.01.T01 | MTR_5g076490 | 40.437 | 366 | 173 | 12 | 57 | 412 | 1 | 331 | 6.10e-59 | 196 |
MsG0680035808.01.T01 | MTR_5g096900 | 39.710 | 345 | 147 | 11 | 17 | 339 | 9 | 314 | 2.84e-58 | 193 |
MsG0680035808.01.T01 | MTR_8g063350 | 35.248 | 383 | 168 | 13 | 14 | 388 | 8 | 318 | 8.59e-56 | 187 |
MsG0680035808.01.T01 | MTR_5g068490 | 35.849 | 318 | 152 | 8 | 96 | 413 | 8 | 273 | 4.43e-54 | 181 |
MsG0680035808.01.T01 | MTR_2g021920 | 44.672 | 244 | 114 | 8 | 178 | 412 | 37 | 268 | 7.93e-54 | 180 |
MsG0680035808.01.T01 | MTR_6g004450 | 42.023 | 257 | 126 | 8 | 159 | 414 | 32 | 266 | 8.71e-53 | 177 |
MsG0680035808.01.T01 | MTR_8g063310 | 33.578 | 408 | 213 | 15 | 6 | 394 | 8 | 376 | 1.87e-52 | 181 |
MsG0680035808.01.T01 | MTR_1g050312 | 38.629 | 321 | 126 | 14 | 87 | 396 | 16 | 276 | 2.17e-51 | 174 |
MsG0680035808.01.T01 | MTR_5g086590 | 41.107 | 253 | 117 | 6 | 137 | 389 | 13 | 233 | 1.16e-49 | 168 |
MsG0680035808.01.T01 | MTR_5g097850 | 50.000 | 188 | 77 | 4 | 232 | 412 | 63 | 240 | 1.89e-48 | 166 |
MsG0680035808.01.T01 | MTR_5g094350 | 36.519 | 293 | 149 | 5 | 18 | 300 | 11 | 276 | 5.58e-48 | 165 |
MsG0680035808.01.T01 | MTR_4g016000 | 41.004 | 239 | 93 | 7 | 142 | 375 | 2 | 197 | 9.24e-47 | 160 |
MsG0680035808.01.T01 | MTR_3g018750 | 41.129 | 248 | 127 | 7 | 177 | 415 | 2 | 239 | 3.08e-46 | 159 |
MsG0680035808.01.T01 | MTR_5g023970 | 47.895 | 190 | 94 | 4 | 225 | 414 | 9 | 193 | 6.37e-46 | 157 |
MsG0680035808.01.T01 | MTR_8g033000 | 35.450 | 378 | 204 | 14 | 57 | 413 | 1 | 359 | 6.42e-45 | 159 |
MsG0680035808.01.T01 | MTR_5g097820 | 37.193 | 285 | 128 | 12 | 1 | 265 | 1 | 254 | 5.46e-44 | 154 |
MsG0680035808.01.T01 | MTR_1g050308 | 39.179 | 268 | 110 | 11 | 2 | 251 | 11 | 243 | 1.19e-43 | 155 |
MsG0680035808.01.T01 | MTR_1g050308 | 49.438 | 89 | 41 | 2 | 307 | 391 | 238 | 326 | 4.06e-17 | 82.4 |
MsG0680035808.01.T01 | MTR_7g019250 | 40.175 | 229 | 106 | 5 | 174 | 400 | 220 | 419 | 3.05e-43 | 157 |
MsG0680035808.01.T01 | MTR_2g104260 | 37.793 | 299 | 150 | 10 | 7 | 291 | 1 | 277 | 1.26e-41 | 148 |
MsG0680035808.01.T01 | MTR_1g076810 | 39.773 | 264 | 128 | 9 | 3 | 259 | 2 | 241 | 1.72e-40 | 153 |
MsG0680035808.01.T01 | MTR_1g115205 | 39.474 | 266 | 108 | 12 | 8 | 264 | 14 | 235 | 1.30e-37 | 137 |
MsG0680035808.01.T01 | MTR_6g009350 | 39.901 | 203 | 105 | 5 | 178 | 378 | 8 | 195 | 1.85e-37 | 135 |
MsG0680035808.01.T01 | MTR_5g066420 | 48.026 | 152 | 69 | 4 | 258 | 404 | 1 | 147 | 4.37e-37 | 132 |
MsG0680035808.01.T01 | MTR_8g036970 | 42.222 | 180 | 91 | 4 | 227 | 405 | 147 | 314 | 1.32e-36 | 137 |
MsG0680035808.01.T01 | MTR_8g036970 | 40.000 | 140 | 73 | 3 | 24 | 154 | 2 | 139 | 4.03e-20 | 91.7 |
MsG0680035808.01.T01 | MTR_5g037190 | 37.762 | 286 | 130 | 9 | 8 | 285 | 5 | 250 | 1.64e-36 | 134 |
MsG0680035808.01.T01 | MTR_4g014370 | 41.969 | 193 | 95 | 5 | 227 | 414 | 154 | 334 | 4.40e-36 | 135 |
MsG0680035808.01.T01 | MTR_4g014370 | 45.588 | 136 | 61 | 7 | 1 | 127 | 6 | 137 | 4.15e-19 | 88.2 |
MsG0680035808.01.T01 | MTR_4g094400 | 60.550 | 109 | 32 | 1 | 251 | 348 | 3 | 111 | 6.63e-36 | 129 |
MsG0680035808.01.T01 | MTR_3g030620 | 43.902 | 164 | 84 | 4 | 241 | 399 | 5 | 165 | 7.26e-36 | 130 |
MsG0680035808.01.T01 | MTR_5g098950 | 38.983 | 236 | 92 | 9 | 139 | 373 | 90 | 274 | 5.05e-35 | 130 |
MsG0680035808.01.T01 | MTR_7g017150 | 43.523 | 193 | 94 | 5 | 227 | 414 | 82 | 264 | 4.31e-34 | 128 |
MsG0680035808.01.T01 | MTR_7g017120 | 43.005 | 193 | 95 | 5 | 227 | 414 | 81 | 263 | 1.13e-33 | 127 |
MsG0680035808.01.T01 | MTR_5g096920 | 45.161 | 155 | 75 | 4 | 258 | 411 | 1 | 146 | 1.47e-33 | 123 |
MsG0680035808.01.T01 | MTR_8g073570 | 41.176 | 187 | 85 | 5 | 11 | 189 | 1 | 170 | 2.76e-33 | 123 |
MsG0680035808.01.T01 | MTR_8g035690 | 36.466 | 266 | 131 | 10 | 170 | 413 | 50 | 299 | 5.46e-33 | 126 |
MsG0680035808.01.T01 | MTR_5g097660 | 50.427 | 117 | 55 | 2 | 299 | 414 | 3 | 117 | 4.14e-31 | 115 |
MsG0680035808.01.T01 | MTR_5g097540 | 45.946 | 148 | 68 | 4 | 227 | 373 | 97 | 233 | 1.23e-30 | 119 |
MsG0680035808.01.T01 | MTR_5g036250 | 52.427 | 103 | 46 | 1 | 311 | 413 | 8 | 107 | 3.10e-28 | 110 |
MsG0680035808.01.T01 | MTR_5g086780 | 48.413 | 126 | 60 | 1 | 266 | 391 | 108 | 228 | 6.05e-28 | 110 |
MsG0680035808.01.T01 | MTR_5g086780 | 67.925 | 53 | 16 | 1 | 8 | 60 | 5 | 56 | 1.81e-12 | 67.0 |
MsG0680035808.01.T01 | MTR_5g096070 | 39.247 | 186 | 70 | 7 | 5 | 185 | 11 | 158 | 5.33e-27 | 105 |
MsG0680035808.01.T01 | MTR_5g097650 | 43.671 | 158 | 73 | 6 | 3 | 154 | 2 | 149 | 6.91e-27 | 105 |
MsG0680035808.01.T01 | MTR_6g087660 | 57.143 | 105 | 39 | 2 | 4 | 102 | 2 | 106 | 1.20e-25 | 103 |
MsG0680035808.01.T01 | MTR_2g022020 | 43.220 | 118 | 63 | 2 | 294 | 411 | 1 | 114 | 4.76e-25 | 99.4 |
MsG0680035808.01.T01 | MTR_5g091150 | 34.375 | 256 | 79 | 10 | 99 | 328 | 2 | 194 | 1.96e-24 | 100 |
MsG0680035808.01.T01 | MTR_1g068835 | 24.093 | 386 | 230 | 16 | 18 | 390 | 2 | 337 | 2.02e-22 | 98.6 |
MsG0680035808.01.T01 | MTR_5g096050 | 48.148 | 108 | 48 | 1 | 258 | 357 | 1 | 108 | 3.46e-22 | 91.7 |
MsG0680035808.01.T01 | MTR_1g047080 | 27.322 | 366 | 170 | 15 | 57 | 413 | 1 | 279 | 6.24e-22 | 95.5 |
MsG0680035808.01.T01 | MTR_3g019290 | 34.061 | 229 | 97 | 8 | 8 | 233 | 1 | 178 | 9.54e-22 | 92.0 |
MsG0680035808.01.T01 | MTR_7g101200 | 31.174 | 247 | 117 | 10 | 130 | 372 | 31 | 228 | 1.38e-21 | 93.2 |
MsG0680035808.01.T01 | MTR_0667s0010 | 23.797 | 395 | 240 | 15 | 15 | 387 | 1 | 356 | 2.46e-21 | 95.5 |
MsG0680035808.01.T01 | MTR_2g426070 | 25.635 | 394 | 220 | 18 | 23 | 388 | 9 | 357 | 2.72e-21 | 95.5 |
MsG0680035808.01.T01 | MTR_2g028130 | 23.664 | 393 | 243 | 13 | 20 | 387 | 5 | 365 | 1.42e-20 | 93.6 |
MsG0680035808.01.T01 | MTR_1g068875 | 23.545 | 378 | 237 | 16 | 20 | 390 | 4 | 336 | 3.27e-20 | 92.0 |
MsG0680035808.01.T01 | MTR_1g068860 | 25.000 | 372 | 230 | 16 | 23 | 387 | 7 | 336 | 4.87e-20 | 91.3 |
MsG0680035808.01.T01 | MTR_2g426060 | 25.653 | 421 | 235 | 20 | 20 | 412 | 6 | 376 | 6.58e-20 | 91.3 |
MsG0680035808.01.T01 | MTR_2g026010 | 26.316 | 380 | 218 | 22 | 39 | 402 | 23 | 356 | 1.73e-19 | 90.1 |
MsG0680035808.01.T01 | MTR_2g031720 | 25.000 | 388 | 232 | 18 | 15 | 388 | 1 | 343 | 2.05e-19 | 89.7 |
MsG0680035808.01.T01 | MTR_2g028160 | 23.810 | 399 | 237 | 16 | 20 | 387 | 5 | 367 | 2.19e-19 | 90.1 |
MsG0680035808.01.T01 | MTR_3g013740 | 26.010 | 396 | 209 | 16 | 6 | 377 | 31 | 366 | 2.42e-19 | 89.7 |
MsG0680035808.01.T01 | MTR_4g133170 | 25.676 | 370 | 222 | 16 | 23 | 385 | 7 | 330 | 2.63e-19 | 89.4 |
MsG0680035808.01.T01 | MTR_2g028110 | 25.326 | 383 | 223 | 16 | 20 | 388 | 4 | 337 | 6.07e-19 | 88.2 |
MsG0680035808.01.T01 | MTR_3g014540 | 23.821 | 403 | 253 | 12 | 2 | 399 | 11 | 364 | 6.98e-19 | 88.2 |
MsG0680035808.01.T01 | MTR_2g021150 | 26.440 | 382 | 221 | 18 | 1 | 377 | 1 | 327 | 7.58e-19 | 87.8 |
MsG0680035808.01.T01 | MTR_3g009240 | 26.757 | 370 | 204 | 16 | 23 | 385 | 39 | 348 | 8.72e-19 | 87.8 |
MsG0680035808.01.T01 | MTR_5g070080 | 23.419 | 427 | 250 | 18 | 11 | 411 | 1 | 376 | 1.03e-18 | 87.8 |
MsG0680035808.01.T01 | MTR_4g061340 | 25.562 | 356 | 214 | 15 | 4 | 354 | 10 | 319 | 1.16e-18 | 87.4 |
MsG0680035808.01.T01 | MTR_2g021050 | 23.773 | 387 | 220 | 14 | 20 | 390 | 5 | 332 | 1.42e-18 | 87.0 |
MsG0680035808.01.T01 | MTR_3g006670 | 26.558 | 369 | 197 | 17 | 23 | 377 | 52 | 360 | 2.46e-18 | 86.7 |
MsG0680035808.01.T01 | MTR_6g065980 | 24.672 | 381 | 211 | 15 | 23 | 396 | 19 | 330 | 3.00e-18 | 85.9 |
MsG0680035808.01.T01 | MTR_5g057790 | 25.220 | 341 | 191 | 14 | 23 | 354 | 49 | 334 | 3.92e-18 | 85.9 |
MsG0680035808.01.T01 | MTR_2g024110 | 23.980 | 392 | 221 | 16 | 20 | 387 | 4 | 342 | 6.04e-18 | 85.1 |
MsG0680035808.01.T01 | MTR_3g014570 | 24.538 | 379 | 233 | 13 | 2 | 377 | 11 | 339 | 1.07e-17 | 84.7 |
MsG0680035808.01.T01 | MTR_0064s0160 | 24.519 | 416 | 252 | 16 | 19 | 411 | 41 | 417 | 1.81e-17 | 84.3 |
MsG0680035808.01.T01 | MTR_2g028140 | 24.816 | 407 | 220 | 19 | 20 | 387 | 5 | 364 | 2.34e-17 | 84.0 |
MsG0680035808.01.T01 | MTR_1g097330 | 25.519 | 337 | 190 | 13 | 20 | 350 | 16 | 297 | 2.53e-17 | 84.0 |
MsG0680035808.01.T01 | MTR_2g425980 | 23.571 | 420 | 246 | 18 | 20 | 412 | 5 | 376 | 2.88e-17 | 83.6 |
MsG0680035808.01.T01 | MTR_5g057710 | 24.629 | 337 | 198 | 14 | 23 | 354 | 49 | 334 | 4.55e-17 | 82.8 |
MsG0680035808.01.T01 | MTR_2g426020 | 23.990 | 421 | 242 | 19 | 20 | 412 | 6 | 376 | 6.06e-17 | 82.4 |
MsG0680035808.01.T01 | MTR_3g047580 | 37.838 | 148 | 68 | 6 | 7 | 151 | 1 | 127 | 8.79e-17 | 76.6 |
MsG0680035808.01.T01 | MTR_2g024100 | 24.538 | 379 | 220 | 17 | 35 | 387 | 22 | 360 | 1.67e-16 | 81.3 |
MsG0680035808.01.T01 | MTR_4g117780 | 28.346 | 254 | 125 | 10 | 20 | 265 | 11 | 215 | 2.77e-16 | 80.1 |
MsG0680035808.01.T01 | MTR_2g031640 | 24.021 | 383 | 216 | 18 | 23 | 385 | 9 | 336 | 3.14e-16 | 80.1 |
MsG0680035808.01.T01 | MTR_8g073550 | 26.772 | 254 | 131 | 8 | 4 | 242 | 3 | 216 | 4.14e-16 | 77.8 |
MsG0680035808.01.T01 | MTR_4g070550 | 24.190 | 401 | 225 | 17 | 20 | 387 | 5 | 359 | 5.60e-16 | 79.7 |
MsG0680035808.01.T01 | MTR_2g031680 | 24.346 | 382 | 233 | 17 | 15 | 387 | 1 | 335 | 5.60e-16 | 79.3 |
MsG0680035808.01.T01 | MTR_3g083010 | 23.020 | 404 | 237 | 17 | 20 | 387 | 6 | 371 | 5.65e-16 | 79.7 |
MsG0680035808.01.T01 | MTR_3g013770 | 26.374 | 364 | 207 | 14 | 23 | 377 | 36 | 347 | 9.03e-16 | 79.0 |
MsG0680035808.01.T01 | MTR_1g061330 | 23.650 | 389 | 232 | 13 | 20 | 395 | 4 | 340 | 9.57e-16 | 79.0 |
MsG0680035808.01.T01 | MTR_8g099460 | 23.636 | 385 | 239 | 14 | 17 | 387 | 2 | 345 | 1.09e-15 | 78.6 |
MsG0680035808.01.T01 | MTR_2g025420 | 23.188 | 414 | 234 | 19 | 15 | 387 | 1 | 371 | 2.07e-15 | 78.2 |
MsG0680035808.01.T01 | MTR_2g021155 | 25.886 | 367 | 219 | 16 | 23 | 387 | 39 | 354 | 3.33e-15 | 78.2 |
MsG0680035808.01.T01 | MTR_3g007410 | 27.035 | 344 | 177 | 18 | 23 | 351 | 55 | 339 | 3.62e-15 | 77.0 |
MsG0680035808.01.T01 | MTR_4g094365 | 23.961 | 409 | 239 | 16 | 19 | 413 | 7 | 357 | 6.18e-15 | 76.3 |
MsG0680035808.01.T01 | MTR_4g021785 | 23.438 | 384 | 226 | 15 | 13 | 387 | 2 | 326 | 7.93e-15 | 75.9 |
MsG0680035808.01.T01 | MTR_4g023080 | 23.768 | 345 | 197 | 12 | 13 | 351 | 2 | 286 | 9.47e-15 | 75.5 |
MsG0680035808.01.T01 | MTR_2g078900 | 22.280 | 386 | 228 | 15 | 1 | 377 | 14 | 336 | 9.57e-15 | 75.5 |
MsG0680035808.01.T01 | MTR_1g050305 | 51.282 | 78 | 33 | 2 | 316 | 388 | 21 | 98 | 1.20e-14 | 71.2 |
MsG0680035808.01.T01 | MTR_4g023090 | 24.571 | 350 | 202 | 15 | 7 | 346 | 1 | 298 | 1.50e-14 | 75.1 |
MsG0680035808.01.T01 | MTR_0115s0020 | 24.485 | 388 | 233 | 15 | 11 | 376 | 1 | 350 | 2.27e-14 | 74.7 |
MsG0680035808.01.T01 | MTR_2g046830 | 24.556 | 338 | 196 | 16 | 19 | 350 | 24 | 308 | 2.38e-14 | 74.7 |
MsG0680035808.01.T01 | MTR_2g025960 | 22.789 | 294 | 169 | 15 | 119 | 387 | 5 | 265 | 2.71e-14 | 73.6 |
MsG0680035808.01.T01 | MTR_3g036290 | 23.546 | 361 | 202 | 15 | 23 | 377 | 25 | 317 | 4.46e-14 | 73.6 |
MsG0680035808.01.T01 | MTR_5g070130 | 21.823 | 417 | 261 | 15 | 14 | 415 | 5 | 371 | 6.34e-14 | 73.2 |
MsG0680035808.01.T01 | MTR_4g116330 | 22.824 | 425 | 254 | 16 | 2 | 411 | 6 | 371 | 6.42e-14 | 73.2 |
MsG0680035808.01.T01 | MTR_2g055970 | 26.786 | 336 | 193 | 14 | 19 | 350 | 210 | 496 | 7.74e-14 | 73.6 |
MsG0680035808.01.T01 | MTR_8g041440 | 37.500 | 112 | 50 | 2 | 8 | 112 | 3 | 101 | 8.24e-14 | 68.2 |
MsG0680035808.01.T01 | MTR_4g024890 | 25.140 | 358 | 203 | 15 | 11 | 351 | 1 | 310 | 1.49e-13 | 72.0 |
MsG0680035808.01.T01 | MTR_1g009110 | 24.194 | 372 | 207 | 17 | 5 | 356 | 3 | 319 | 2.32e-13 | 71.6 |
MsG0680035808.01.T01 | MTR_3g097190 | 52.727 | 55 | 26 | 0 | 335 | 389 | 28 | 82 | 2.67e-13 | 68.6 |
MsG0680035808.01.T01 | MTR_3g007270 | 24.225 | 355 | 199 | 14 | 23 | 359 | 50 | 352 | 5.03e-13 | 70.5 |
MsG0680035808.01.T01 | MTR_8g013010 | 26.384 | 307 | 171 | 12 | 19 | 320 | 53 | 309 | 5.44e-13 | 69.7 |
MsG0680035808.01.T01 | MTR_4g031770 | 24.198 | 343 | 202 | 15 | 18 | 355 | 2 | 291 | 6.15e-13 | 70.1 |
MsG0680035808.01.T01 | MTR_4g055060 | 23.919 | 393 | 222 | 20 | 9 | 377 | 6 | 345 | 6.86e-13 | 70.1 |
MsG0680035808.01.T01 | MTR_1g056710 | 26.844 | 339 | 174 | 16 | 23 | 347 | 37 | 315 | 7.30e-13 | 70.1 |
MsG0680035808.01.T01 | MTR_3g047540 | 47.191 | 89 | 35 | 4 | 227 | 314 | 6 | 83 | 8.60e-13 | 64.3 |
MsG0680035808.01.T01 | MTR_5g070088 | 24.079 | 353 | 209 | 15 | 16 | 350 | 3 | 314 | 1.27e-12 | 69.3 |
MsG0680035808.01.T01 | MTR_3g036335 | 23.416 | 363 | 213 | 18 | 23 | 377 | 44 | 349 | 1.48e-12 | 69.3 |
MsG0680035808.01.T01 | MTR_3g007330 | 23.304 | 339 | 205 | 12 | 23 | 359 | 51 | 336 | 1.85e-12 | 68.9 |
MsG0680035808.01.T01 | MTR_4g122850 | 26.619 | 278 | 148 | 13 | 31 | 297 | 12 | 244 | 1.94e-12 | 68.6 |
MsG0680035808.01.T01 | MTR_2g046900 | 24.776 | 335 | 207 | 15 | 19 | 350 | 27 | 319 | 2.18e-12 | 68.6 |
MsG0680035808.01.T01 | MTR_1g068905 | 23.181 | 371 | 179 | 15 | 20 | 387 | 4 | 271 | 3.14e-12 | 67.4 |
MsG0680035808.01.T01 | MTR_2g046920 | 24.857 | 350 | 185 | 17 | 19 | 353 | 23 | 309 | 3.33e-12 | 67.8 |
MsG0680035808.01.T01 | MTR_5g057643 | 27.326 | 172 | 107 | 5 | 23 | 192 | 49 | 204 | 4.67e-12 | 66.6 |
MsG0680035808.01.T01 | MTR_4g023070 | 25.146 | 342 | 190 | 16 | 20 | 350 | 3 | 289 | 6.68e-12 | 67.0 |
MsG0680035808.01.T01 | MTR_8g032390 | 22.807 | 399 | 204 | 18 | 2 | 391 | 25 | 328 | 7.54e-12 | 67.0 |
MsG0680035808.01.T01 | MTR_3g009260 | 26.113 | 337 | 178 | 17 | 23 | 350 | 44 | 318 | 9.82e-12 | 66.6 |
MsG0680035808.01.T01 | MTR_8g467140 | 26.393 | 341 | 198 | 15 | 14 | 350 | 26 | 317 | 1.12e-11 | 65.9 |
MsG0680035808.01.T01 | MTR_4g116330 | 25.275 | 273 | 146 | 11 | 2 | 265 | 6 | 229 | 1.16e-11 | 65.9 |
MsG0680035808.01.T01 | MTR_3g007430 | 23.188 | 345 | 210 | 15 | 23 | 362 | 46 | 340 | 1.39e-11 | 66.2 |
MsG0680035808.01.T01 | MTR_1g055070 | 23.793 | 290 | 182 | 12 | 7 | 287 | 36 | 295 | 3.09e-11 | 65.1 |
MsG0680035808.01.T01 | MTR_4g023120 | 24.476 | 286 | 163 | 11 | 20 | 299 | 3 | 241 | 4.62e-11 | 64.3 |
MsG0680035808.01.T01 | MTR_1g055135 | 22.997 | 387 | 232 | 16 | 8 | 376 | 1 | 339 | 5.31e-11 | 64.3 |
MsG0680035808.01.T01 | MTR_7g070440 | 23.011 | 352 | 203 | 13 | 18 | 351 | 5 | 306 | 5.36e-11 | 64.3 |
MsG0680035808.01.T01 | MTR_0128s0020 | 22.449 | 441 | 259 | 19 | 2 | 411 | 4 | 392 | 5.44e-11 | 64.3 |
MsG0680035808.01.T01 | MTR_3g036430 | 22.656 | 384 | 202 | 16 | 1 | 377 | 1 | 296 | 5.98e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035808.01.T01 | AT3G06240 | 23.218 | 435 | 237 | 20 | 2 | 391 | 16 | 398 | 2.06e-15 | 78.2 |
MsG0680035808.01.T01 | AT4G12560 | 23.057 | 386 | 242 | 13 | 20 | 390 | 4 | 349 | 1.86e-13 | 72.0 |
MsG0680035808.01.T01 | AT4G12560 | 23.057 | 386 | 242 | 13 | 20 | 390 | 4 | 349 | 1.86e-13 | 72.0 |
MsG0680035808.01.T01 | AT4G12560 | 23.057 | 386 | 242 | 13 | 20 | 390 | 4 | 349 | 1.86e-13 | 72.0 |
MsG0680035808.01.T01 | AT4G22390 | 22.941 | 340 | 203 | 13 | 80 | 396 | 49 | 352 | 2.53e-11 | 65.5 |
MsG0680035808.01.T01 | AT4G22390 | 23.167 | 341 | 201 | 14 | 80 | 396 | 49 | 352 | 2.97e-11 | 65.1 |
MsG0680035808.01.T01 | AT3G22650 | 23.361 | 244 | 134 | 8 | 23 | 265 | 12 | 203 | 6.17e-11 | 63.9 |
Find 78 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATATGAATATGATAATTT+TGG | 0.122724 | 6:-112628578 | MsG0680035808.01.T01:CDS |
AGGCTATATATCTCCCATTT+TGG | 0.208020 | 6:+112628290 | None:intergenic |
GAGATATTAATTCACCAAAA+TGG | 0.223250 | 6:-112628304 | MsG0680035808.01.T01:CDS |
TCGTAACCAGTTGATGAATT+TGG | 0.231210 | 6:+112628362 | None:intergenic |
TCAAAACAATCATCTACTTC+TGG | 0.256405 | 6:+112628077 | None:intergenic |
GTGGAAGAAGCTTGATTCTT+TGG | 0.260113 | 6:+112628528 | None:intergenic |
TTCGTTAACGCCCGTCTTCA+TGG | 0.279237 | 6:-112628449 | MsG0680035808.01.T01:CDS |
AACGCCCGTCTTCATGGATT+TGG | 0.323563 | 6:-112628443 | MsG0680035808.01.T01:CDS |
ATAAACTTGGCGGTGTTAAA+TGG | 0.327720 | 6:-112628038 | MsG0680035808.01.T01:CDS |
AACCAAGCACCTCAATCATT+TGG | 0.340170 | 6:+112627811 | None:intergenic |
GAAATTGTTTCTCATCGGTT+TGG | 0.350246 | 6:-112628326 | MsG0680035808.01.T01:CDS |
TGTTGACATGTCGTATTCTA+TGG | 0.356190 | 6:-112628240 | MsG0680035808.01.T01:CDS |
GCTTGATTCTTTGGGTAGTT+GGG | 0.356493 | 6:+112628537 | None:intergenic |
AGCTTGATTCTTTGGGTAGT+TGG | 0.357236 | 6:+112628536 | None:intergenic |
AGAGGGAACCCGAGTCTATA+TGG | 0.362823 | 6:-112628210 | MsG0680035808.01.T01:CDS |
TAAACTACTTATTCCTCAAA+TGG | 0.380948 | 6:+112627729 | None:intergenic |
TGCACCTTCACATTGAGAAT+TGG | 0.381772 | 6:+112628766 | None:intergenic |
AAAGAGTTATCTTCTTCAAA+TGG | 0.388433 | 6:+112628647 | None:intergenic |
AATTATCATATTCATATAGA+TGG | 0.391520 | 6:+112628582 | None:intergenic |
GACGGTTGATTCATCGTCAC+TGG | 0.398444 | 6:+112628505 | None:intergenic |
TGGAAGAAGCTTGATTCTTT+GGG | 0.399675 | 6:+112628529 | None:intergenic |
CAAAACAATCATCTACTTCT+GGG | 0.409634 | 6:+112628078 | None:intergenic |
AGATATTAATTCACCAAAAT+GGG | 0.413215 | 6:-112628303 | MsG0680035808.01.T01:CDS |
ATCGTGGATCAAACTCTTCA+TGG | 0.413723 | 6:-112627937 | MsG0680035808.01.T01:CDS |
ATATGGATGGTGTGTGTCAT+TGG | 0.414992 | 6:-112628193 | MsG0680035808.01.T01:CDS |
AAACGCTTGAAAGATTTAAG+AGG | 0.425978 | 6:+112628866 | None:intergenic |
GGAAAGCATTGTTCCATTTG+AGG | 0.427560 | 6:-112627742 | MsG0680035808.01.T01:CDS |
ATAAAACCAAATTCATCAAC+TGG | 0.430155 | 6:-112628368 | MsG0680035808.01.T01:CDS |
TATGCCGGTTGGACAATGTT+TGG | 0.434378 | 6:-112628147 | MsG0680035808.01.T01:CDS |
CCTATCGGAGTGGGGACAAA+GGG | 0.442789 | 6:-112627888 | MsG0680035808.01.T01:CDS |
ACCAAGCACCTCAATCATTT+GGG | 0.444957 | 6:+112627812 | None:intergenic |
TTGAATGTGTTTGTAAATCA+TGG | 0.449872 | 6:-112628844 | MsG0680035808.01.T01:CDS |
GATACCAAACATTGTCCAAC+CGG | 0.468176 | 6:+112628143 | None:intergenic |
CAAATGACTATAATGTCATT+CGG | 0.499890 | 6:-112628406 | MsG0680035808.01.T01:CDS |
TCAAAGAAATTGTTTCTCAT+CGG | 0.505189 | 6:-112628331 | MsG0680035808.01.T01:CDS |
CCTTACGTTGAGCGTCCTAT+CGG | 0.505399 | 6:-112627903 | MsG0680035808.01.T01:CDS |
GAAAAGATAATGAAGTGGCT+TGG | 0.506338 | 6:-112627848 | MsG0680035808.01.T01:CDS |
CATTATAGTCATTTGCAACA+TGG | 0.508068 | 6:+112628414 | None:intergenic |
CCCTTTGTCCCCACTCCGAT+AGG | 0.513186 | 6:+112627888 | None:intergenic |
CCGATAGGACGCTCAACGTA+AGG | 0.516335 | 6:+112627903 | None:intergenic |
ATGATATGAGATCAATGCTA+TGG | 0.518105 | 6:+112628013 | None:intergenic |
TTATCCAATTCTCAATGTGA+AGG | 0.532349 | 6:-112628770 | MsG0680035808.01.T01:CDS |
ACCCAAATGATTGAGGTGCT+TGG | 0.532373 | 6:-112627813 | MsG0680035808.01.T01:CDS |
CGCAAAGTGGATAAACTTGG+CGG | 0.533519 | 6:-112628048 | MsG0680035808.01.T01:CDS |
TGGATCAAACTCTTCATGGT+TGG | 0.542872 | 6:-112627933 | MsG0680035808.01.T01:CDS |
TCCTATCGGAGTGGGGACAA+AGG | 0.543727 | 6:-112627889 | MsG0680035808.01.T01:CDS |
GATGAAGAAGAAGAAATCAA+TGG | 0.550799 | 6:-112628963 | MsG0680035808.01.T01:CDS |
TAGCGCAAAGTGGATAAACT+TGG | 0.560365 | 6:-112628051 | MsG0680035808.01.T01:CDS |
GAAGGACACTTCATTGCTCA+AGG | 0.564204 | 6:+112628115 | None:intergenic |
GTTGAGCGTCCTATCGGAGT+GGG | 0.567484 | 6:-112627897 | MsG0680035808.01.T01:CDS |
TTTGAGTACCCAAATGATTG+AGG | 0.574013 | 6:-112627820 | MsG0680035808.01.T01:CDS |
TTGGTTATACAGCAAAGAGT+TGG | 0.576664 | 6:-112627794 | MsG0680035808.01.T01:CDS |
AAAACAATCATCTACTTCTG+GGG | 0.578361 | 6:+112628079 | None:intergenic |
AATATCATCGGATATATATG+TGG | 0.584460 | 6:+112628913 | None:intergenic |
ATAACCAAATCCATGAAGAC+GGG | 0.587059 | 6:+112628439 | None:intergenic |
TATAACCAAATCCATGAAGA+CGG | 0.594593 | 6:+112628438 | None:intergenic |
CATCAGAAAAGATAATGAAG+TGG | 0.598750 | 6:-112627853 | MsG0680035808.01.T01:CDS |
CTCCTCAGTTACATTAGTGA+CGG | 0.598763 | 6:+112628487 | None:intergenic |
ACGGTTGATTCATCGTCACT+GGG | 0.603092 | 6:+112628506 | None:intergenic |
AATGGAGAAGACAATATCAT+CGG | 0.605115 | 6:+112628901 | None:intergenic |
TATTCTATGGAACGCAGAGA+GGG | 0.606922 | 6:-112628227 | MsG0680035808.01.T01:CDS |
GGTTGCTGCGATGAATGAAA+AGG | 0.613276 | 6:-112628942 | MsG0680035808.01.T01:CDS |
ACACACCATCCATATAGACT+CGG | 0.614078 | 6:+112628201 | None:intergenic |
TTGTATGATAATAAATTACG+AGG | 0.615195 | 6:-112627763 | MsG0680035808.01.T01:CDS |
AACTCGGTTTCAAAGAATCG+TGG | 0.617879 | 6:-112627953 | MsG0680035808.01.T01:CDS |
AAACAATCATCTACTTCTGG+GGG | 0.620086 | 6:+112628080 | None:intergenic |
GGAACCCGAGTCTATATGGA+TGG | 0.634610 | 6:-112628206 | MsG0680035808.01.T01:CDS |
CGTTGAGCGTCCTATCGGAG+TGG | 0.637751 | 6:-112627898 | MsG0680035808.01.T01:CDS |
CACACCATCCATATAGACTC+GGG | 0.652998 | 6:+112628202 | None:intergenic |
AATTCATCAACTGGTTACGA+TGG | 0.659945 | 6:-112628359 | MsG0680035808.01.T01:CDS |
GGACGCTCAACGTAAGGCAA+CGG | 0.667318 | 6:+112627909 | None:intergenic |
AACCGTCACTAATGTAACTG+AGG | 0.673930 | 6:-112628489 | MsG0680035808.01.T01:CDS |
GTTGATTCATCGTCACTGGG+TGG | 0.685808 | 6:+112628509 | None:intergenic |
CTATCGGAGTGGGGACAAAG+GGG | 0.689791 | 6:-112627887 | MsG0680035808.01.T01:CDS |
TCACTAATGTAACTGAGGAG+AGG | 0.695184 | 6:-112628484 | MsG0680035808.01.T01:CDS |
TTGAGCGTCCTATCGGAGTG+GGG | 0.697017 | 6:-112627896 | MsG0680035808.01.T01:CDS |
GTATTCTATGGAACGCAGAG+AGG | 0.716570 | 6:-112628228 | MsG0680035808.01.T01:CDS |
AATTGGATAAGAAATTGTAG+CGG | 0.721360 | 6:+112628783 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATGAATATGATAATTTT+GGG | - | Chr6:112628122-112628141 | MsG0680035808.01.T01:CDS | 10.0% |
!! | AATTATCATATTCATATAGA+TGG | + | Chr6:112628120-112628139 | None:intergenic | 15.0% |
!! | ACAATATAAAAAATATATGC+CGG | - | Chr6:112628537-112628556 | MsG0680035808.01.T01:CDS | 15.0% |
!!! | CTATATGAATATGATAATTT+TGG | - | Chr6:112628121-112628140 | MsG0680035808.01.T01:CDS | 15.0% |
!! | AGATATTAATTCACCAAAAT+GGG | - | Chr6:112628396-112628415 | MsG0680035808.01.T01:CDS | 20.0% |
!! | TTGTATGATAATAAATTACG+AGG | - | Chr6:112628936-112628955 | MsG0680035808.01.T01:CDS | 20.0% |
!!! | ACTTTTCATGTATCAATTTT+GGG | - | Chr6:112628721-112628740 | MsG0680035808.01.T01:CDS | 20.0% |
!!! | GATAACTCTTTTTATATTGT+TGG | - | Chr6:112628064-112628083 | MsG0680035808.01.T01:CDS | 20.0% |
!!! | TACTTTTCATGTATCAATTT+TGG | - | Chr6:112628720-112628739 | MsG0680035808.01.T01:CDS | 20.0% |
!!! | TCTTTTTATATTGTTGGTTT+TGG | - | Chr6:112628070-112628089 | MsG0680035808.01.T01:CDS | 20.0% |
! | AAAGAGTTATCTTCTTCAAA+TGG | + | Chr6:112628055-112628074 | None:intergenic | 25.0% |
! | AATATCATCGGATATATATG+TGG | + | Chr6:112627789-112627808 | None:intergenic | 25.0% |
! | AATTGGATAAGAAATTGTAG+CGG | + | Chr6:112627919-112627938 | None:intergenic | 25.0% |
! | ATAAAACCAAATTCATCAAC+TGG | - | Chr6:112628331-112628350 | MsG0680035808.01.T01:CDS | 25.0% |
! | CAAATGACTATAATGTCATT+CGG | - | Chr6:112628293-112628312 | MsG0680035808.01.T01:CDS | 25.0% |
! | GAGATATTAATTCACCAAAA+TGG | - | Chr6:112628395-112628414 | MsG0680035808.01.T01:CDS | 25.0% |
! | TATAAAAAATATATGCCGGT+TGG | - | Chr6:112628541-112628560 | MsG0680035808.01.T01:CDS | 25.0% |
! | TTGAATGTGTTTGTAAATCA+TGG | - | Chr6:112627855-112627874 | MsG0680035808.01.T01:CDS | 25.0% |
!! | TCAAAGAAATTGTTTCTCAT+CGG | - | Chr6:112628368-112628387 | MsG0680035808.01.T01:CDS | 25.0% |
!!! | GAAGTTTTGTATTCTTTTTC+TGG | - | Chr6:112627989-112628008 | MsG0680035808.01.T01:CDS | 25.0% |
!!! | TTTTGTATTCTTTTTCTGGT+GGG | - | Chr6:112627993-112628012 | MsG0680035808.01.T01:CDS | 25.0% |
AAAACAATCATCTACTTCTG+GGG | + | Chr6:112628623-112628642 | None:intergenic | 30.0% | |
AAACGCTTGAAAGATTTAAG+AGG | + | Chr6:112627836-112627855 | None:intergenic | 30.0% | |
AATGGAGAAGACAATATCAT+CGG | + | Chr6:112627801-112627820 | None:intergenic | 30.0% | |
ATAGCCTAAAAAGTAATTCG+TGG | - | Chr6:112628425-112628444 | MsG0680035808.01.T01:CDS | 30.0% | |
ATGATATGAGATCAATGCTA+TGG | + | Chr6:112628689-112628708 | None:intergenic | 30.0% | |
CAAAACAATCATCTACTTCT+GGG | + | Chr6:112628624-112628643 | None:intergenic | 30.0% | |
CATCAGAAAAGATAATGAAG+TGG | - | Chr6:112628846-112628865 | MsG0680035808.01.T01:CDS | 30.0% | |
CATTATAGTCATTTGCAACA+TGG | + | Chr6:112628288-112628307 | None:intergenic | 30.0% | |
TATAACCAAATCCATGAAGA+CGG | + | Chr6:112628264-112628283 | None:intergenic | 30.0% | |
TCAAAACAATCATCTACTTC+TGG | + | Chr6:112628625-112628644 | None:intergenic | 30.0% | |
TTATCCAATTCTCAATGTGA+AGG | - | Chr6:112627929-112627948 | MsG0680035808.01.T01:CDS | 30.0% | |
! | AGTTTTCAATTACAAAGAGC+AGG | + | Chr6:112627964-112627983 | None:intergenic | 30.0% |
! | GTTTTCAATTACAAAGAGCA+GGG | + | Chr6:112627963-112627982 | None:intergenic | 30.0% |
! | GTTTTGTATTCTTTTTCTGG+TGG | - | Chr6:112627992-112628011 | MsG0680035808.01.T01:CDS | 30.0% |
! | TTTTCAATTACAAAGAGCAG+GGG | + | Chr6:112627962-112627981 | None:intergenic | 30.0% |
!! | AAGAGGTAATTTTGAGAGAA+TGG | + | Chr6:112627819-112627838 | None:intergenic | 30.0% |
!! | ATTTTGGGAAAATTGTACTG+TGG | - | Chr6:112628137-112628156 | MsG0680035808.01.T01:CDS | 30.0% |
!!! | GTTGGTTTTGGTAGTATTAA+TGG | - | Chr6:112628082-112628101 | MsG0680035808.01.T01:CDS | 30.0% |
!!! | TTCTCCACGAATTACTTTTT+AGG | + | Chr6:112628432-112628451 | None:intergenic | 30.0% |
AAACAATCATCTACTTCTGG+GGG | + | Chr6:112628622-112628641 | None:intergenic | 35.0% | |
AATTCATCAACTGGTTACGA+TGG | - | Chr6:112628340-112628359 | MsG0680035808.01.T01:CDS | 35.0% | |
ATAACCAAATCCATGAAGAC+GGG | + | Chr6:112628263-112628282 | None:intergenic | 35.0% | |
GAAAAGATAATGAAGTGGCT+TGG | - | Chr6:112628851-112628870 | MsG0680035808.01.T01:CDS | 35.0% | |
TGGAAGAAGCTTGATTCTTT+GGG | + | Chr6:112628173-112628192 | None:intergenic | 35.0% | |
TGTTGACATGTCGTATTCTA+TGG | - | Chr6:112628459-112628478 | MsG0680035808.01.T01:CDS | 35.0% | |
TTGGTTATACAGCAAAGAGT+TGG | - | Chr6:112628905-112628924 | MsG0680035808.01.T01:CDS | 35.0% | |
TTTGAGTACCCAAATGATTG+AGG | - | Chr6:112628879-112628898 | MsG0680035808.01.T01:CDS | 35.0% | |
! | AGGCTATATATCTCCCATTT+TGG | + | Chr6:112628412-112628431 | None:intergenic | 35.0% |
! | ATAAACTTGGCGGTGTTAAA+TGG | - | Chr6:112628661-112628680 | MsG0680035808.01.T01:CDS | 35.0% |
! | GAAATTGTTTCTCATCGGTT+TGG | - | Chr6:112628373-112628392 | MsG0680035808.01.T01:CDS | 35.0% |
!! | GTATCAATTTTGGGTCAACT+CGG | - | Chr6:112628730-112628749 | MsG0680035808.01.T01:CDS | 35.0% |
!! | TCGTAACCAGTTGATGAATT+TGG | + | Chr6:112628340-112628359 | None:intergenic | 35.0% |
AACCAAGCACCTCAATCATT+TGG | + | Chr6:112628891-112628910 | None:intergenic | 40.0% | |
AACCGTCACTAATGTAACTG+AGG | - | Chr6:112628210-112628229 | MsG0680035808.01.T01:CDS | 40.0% | |
AACTCGGTTTCAAAGAATCG+TGG | - | Chr6:112628746-112628765 | MsG0680035808.01.T01:CDS | 40.0% | |
ACACACCATCCATATAGACT+CGG | + | Chr6:112628501-112628520 | None:intergenic | 40.0% | |
ACCAAGCACCTCAATCATTT+GGG | + | Chr6:112628890-112628909 | None:intergenic | 40.0% | |
AGCTTGATTCTTTGGGTAGT+TGG | + | Chr6:112628166-112628185 | None:intergenic | 40.0% | |
ATATGGATGGTGTGTGTCAT+TGG | - | Chr6:112628506-112628525 | MsG0680035808.01.T01:CDS | 40.0% | |
ATCGTGGATCAAACTCTTCA+TGG | - | Chr6:112628762-112628781 | MsG0680035808.01.T01:CDS | 40.0% | |
CTCCTCAGTTACATTAGTGA+CGG | + | Chr6:112628215-112628234 | None:intergenic | 40.0% | |
GATACCAAACATTGTCCAAC+CGG | + | Chr6:112628559-112628578 | None:intergenic | 40.0% | |
GCTTGATTCTTTGGGTAGTT+GGG | + | Chr6:112628165-112628184 | None:intergenic | 40.0% | |
GTGGAAGAAGCTTGATTCTT+TGG | + | Chr6:112628174-112628193 | None:intergenic | 40.0% | |
TAGCGCAAAGTGGATAAACT+TGG | - | Chr6:112628648-112628667 | MsG0680035808.01.T01:CDS | 40.0% | |
TATTCTATGGAACGCAGAGA+GGG | - | Chr6:112628472-112628491 | MsG0680035808.01.T01:CDS | 40.0% | |
TCACTAATGTAACTGAGGAG+AGG | - | Chr6:112628215-112628234 | MsG0680035808.01.T01:CDS | 40.0% | |
TGCACCTTCACATTGAGAAT+TGG | + | Chr6:112627936-112627955 | None:intergenic | 40.0% | |
TGGATCAAACTCTTCATGGT+TGG | - | Chr6:112628766-112628785 | MsG0680035808.01.T01:CDS | 40.0% | |
!! | GGAAAGCATTGTTCCATTTG+AGG | - | Chr6:112628957-112628976 | MsG0680035808.01.T01:CDS | 40.0% |
!! | GTTTTGATGTTAGCGCAAAG+TGG | - | Chr6:112628638-112628657 | MsG0680035808.01.T01:CDS | 40.0% |
!! | TGTATTCTTTTTCTGGTGGG+AGG | - | Chr6:112627996-112628015 | MsG0680035808.01.T01:CDS | 40.0% |
CACACCATCCATATAGACTC+GGG | + | Chr6:112628500-112628519 | None:intergenic | 45.0% | |
CGCAAAGTGGATAAACTTGG+CGG | - | Chr6:112628651-112628670 | MsG0680035808.01.T01:CDS | 45.0% | |
GAAGGACACTTCATTGCTCA+AGG | + | Chr6:112628587-112628606 | None:intergenic | 45.0% | |
GGTTGCTGCGATGAATGAAA+AGG | - | Chr6:112627757-112627776 | MsG0680035808.01.T01:CDS | 45.0% | |
GTATTCTATGGAACGCAGAG+AGG | - | Chr6:112628471-112628490 | MsG0680035808.01.T01:CDS | 45.0% | |
! | ACCCAAATGATTGAGGTGCT+TGG | - | Chr6:112628886-112628905 | MsG0680035808.01.T01:CDS | 45.0% |
! | ACGGTTGATTCATCGTCACT+GGG | + | Chr6:112628196-112628215 | None:intergenic | 45.0% |
! | ATCATCTACTTCTGGGGGAA+TGG | + | Chr6:112628617-112628636 | None:intergenic | 45.0% |
! | TATGCCGGTTGGACAATGTT+TGG | - | Chr6:112628552-112628571 | MsG0680035808.01.T01:CDS | 45.0% |
! | TCATCTACTTCTGGGGGAAT+GGG | + | Chr6:112628616-112628635 | None:intergenic | 45.0% |
AACGCCCGTCTTCATGGATT+TGG | - | Chr6:112628256-112628275 | MsG0680035808.01.T01:CDS | 50.0% | |
AGAGGGAACCCGAGTCTATA+TGG | - | Chr6:112628489-112628508 | MsG0680035808.01.T01:CDS | 50.0% | |
CCTTACGTTGAGCGTCCTAT+CGG | - | Chr6:112628796-112628815 | MsG0680035808.01.T01:CDS | 50.0% | |
GGAACCCGAGTCTATATGGA+TGG | - | Chr6:112628493-112628512 | MsG0680035808.01.T01:CDS | 50.0% | |
TTCGTTAACGCCCGTCTTCA+TGG | - | Chr6:112628250-112628269 | MsG0680035808.01.T01:CDS | 50.0% | |
! | GACGGTTGATTCATCGTCAC+TGG | + | Chr6:112628197-112628216 | None:intergenic | 50.0% |
! | GTTGATTCATCGTCACTGGG+TGG | + | Chr6:112628193-112628212 | None:intergenic | 50.0% |
CCGATAGGACGCTCAACGTA+AGG | + | Chr6:112628799-112628818 | None:intergenic | 55.0% | |
CCTATCGGAGTGGGGACAAA+GGG | - | Chr6:112628811-112628830 | MsG0680035808.01.T01:CDS | 55.0% | |
CTATCGGAGTGGGGACAAAG+GGG | - | Chr6:112628812-112628831 | MsG0680035808.01.T01:CDS | 55.0% | |
GGACGCTCAACGTAAGGCAA+CGG | + | Chr6:112628793-112628812 | None:intergenic | 55.0% | |
GTTGAGCGTCCTATCGGAGT+GGG | - | Chr6:112628802-112628821 | MsG0680035808.01.T01:CDS | 55.0% | |
TCCTATCGGAGTGGGGACAA+AGG | - | Chr6:112628810-112628829 | MsG0680035808.01.T01:CDS | 55.0% | |
TTGAGCGTCCTATCGGAGTG+GGG | - | Chr6:112628803-112628822 | MsG0680035808.01.T01:CDS | 55.0% | |
! | TGGGGGAATGGGTGTTGTGA+AGG | + | Chr6:112628605-112628624 | None:intergenic | 55.0% |
CCCTTTGTCCCCACTCCGAT+AGG | + | Chr6:112628814-112628833 | None:intergenic | 60.0% | |
CGTTGAGCGTCCTATCGGAG+TGG | - | Chr6:112628801-112628820 | MsG0680035808.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 112627737 | 112628984 | 112627737 | ID=MsG0680035808.01;Name=MsG0680035808.01 |
Chr6 | mRNA | 112627737 | 112628984 | 112627737 | ID=MsG0680035808.01.T01;Parent=MsG0680035808.01;Name=MsG0680035808.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|415 |
Chr6 | exon | 112627737 | 112628984 | 112627737 | ID=MsG0680035808.01.T01:exon:9617;Parent=MsG0680035808.01.T01 |
Chr6 | CDS | 112627737 | 112628984 | 112627737 | ID=MsG0680035808.01.T01:cds;Parent=MsG0680035808.01.T01 |
Gene Sequence |
Protein sequence |