AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009537.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009537.01.T01 MTR_2g066200 85.861 389 52 2 1 386 1 389 0.0 684
MsG0280009537.01.T01 MTR_2g066170 82.519 389 63 3 1 386 1 387 0.0 652
MsG0280009537.01.T01 MTR_8g039500 77.966 354 70 2 1 354 1 346 0.0 557
MsG0280009537.01.T01 MTR_2g066150 58.869 389 129 8 1 386 1 361 2.05e-151 432
MsG0280009537.01.T01 MTR_2g065860 58.081 396 149 9 1 386 1 389 5.08e-147 422
MsG0280009537.01.T01 MTR_2g065840 54.660 397 162 9 1 386 1 390 1.47e-133 388
MsG0280009537.01.T01 MTR_3g011120 52.493 381 164 10 1 375 1 370 2.53e-123 361
MsG0280009537.01.T01 MTR_1g050308 48.454 388 136 9 1 386 23 348 2.08e-112 332
MsG0280009537.01.T01 MTR_8g467670 46.702 379 184 9 11 384 13 378 8.77e-106 317
MsG0280009537.01.T01 MTR_5g024260 48.500 400 170 15 1 373 7 397 7.35e-105 315
MsG0280009537.01.T01 MTR_8g063440 45.897 390 191 9 1 381 1 379 5.64e-104 312
MsG0280009537.01.T01 MTR_0129s0120 44.584 397 194 10 4 384 9 395 4.06e-101 305
MsG0280009537.01.T01 MTR_8g464770 44.935 385 195 10 1 379 1 374 5.16e-101 304
MsG0280009537.01.T01 MTR_0129s0070 44.975 398 187 13 6 384 11 395 6.81e-100 302
MsG0280009537.01.T01 MTR_8g064890 44.361 399 195 10 1 384 1 387 5.94e-99 299
MsG0280009537.01.T01 MTR_1g050312 57.343 286 93 8 80 362 13 272 9.60e-98 293
MsG0280009537.01.T01 MTR_0831s0010 43.812 404 187 14 2 385 38 421 1.44e-94 289
MsG0280009537.01.T01 MTR_2g022000 42.446 417 182 17 2 376 6 406 1.68e-92 285
MsG0280009537.01.T01 MTR_0129s0050 41.330 421 188 16 4 384 6 407 1.38e-91 281
MsG0280009537.01.T01 MTR_5g097330 40.000 410 208 14 1 384 5 402 2.94e-91 280
MsG0280009537.01.T01 MTR_2g021800 42.019 426 188 16 2 384 6 415 3.41e-91 280
MsG0280009537.01.T01 MTR_0054s0100 41.119 411 208 11 2 386 7 409 1.55e-90 278
MsG0280009537.01.T01 MTR_2g034700 44.909 383 187 12 3 378 4 369 1.29e-89 275
MsG0280009537.01.T01 MTR_2g038680 40.573 419 201 14 1 384 5 410 1.31e-89 276
MsG0280009537.01.T01 MTR_4g117550 40.394 406 175 12 4 384 9 372 2.01e-89 275
MsG0280009537.01.T01 MTR_8g012090 43.396 371 152 11 1 354 5 334 4.30e-89 272
MsG0280009537.01.T01 MTR_6g086825 42.040 402 198 12 9 384 67 459 9.09e-89 276
MsG0280009537.01.T01 MTR_0054s0090 40.633 411 208 11 2 386 7 407 8.06e-88 271
MsG0280009537.01.T01 MTR_2g021950 41.542 402 201 15 1 381 5 393 1.51e-86 268
MsG0280009537.01.T01 MTR_4g028510 41.032 407 208 13 1 384 4 401 6.13e-86 268
MsG0280009537.01.T01 MTR_6g079810 41.646 413 196 12 4 383 61 461 2.05e-85 267
MsG0280009537.01.T01 MTR_4g102410 39.364 409 212 11 1 383 50 448 7.74e-85 265
MsG0280009537.01.T01 MTR_5g097350 41.602 387 200 12 7 381 11 383 1.09e-84 263
MsG0280009537.01.T01 MTR_4g014370 38.663 419 211 11 1 384 1 408 1.60e-84 263
MsG0280009537.01.T01 MTR_2g021770 40.670 418 206 15 1 386 1 408 2.18e-84 263
MsG0280009537.01.T01 MTR_1g007450 40.617 389 206 10 1 371 1 382 4.78e-84 262
MsG0280009537.01.T01 MTR_6g079770 39.423 416 207 10 4 383 9 415 1.85e-83 261
MsG0280009537.01.T01 MTR_1g098180 40.000 400 179 13 1 379 1 360 1.03e-82 257
MsG0280009537.01.T01 MTR_6g080680 39.950 398 202 12 2 379 9 389 1.04e-82 258
MsG0280009537.01.T01 MTR_8g036970 43.697 357 142 9 16 366 2 305 1.45e-82 257
MsG0280009537.01.T01 MTR_4g007940 45.376 346 150 14 60 378 2 335 8.37e-82 254
MsG0280009537.01.T01 MTR_8g064790 40.921 391 169 10 1 384 1 336 8.71e-82 254
MsG0280009537.01.T01 MTR_6g461660 41.058 397 204 13 4 381 11 396 2.39e-81 254
MsG0280009537.01.T01 MTR_4g055820 41.484 364 179 9 2 340 4 358 1.08e-80 251
MsG0280009537.01.T01 MTR_8g063330 43.956 364 164 15 1 340 1 348 1.21e-80 255
MsG0280009537.01.T01 MTR_4g028680 39.259 405 220 11 1 386 4 401 1.24e-80 253
MsG0280009537.01.T01 MTR_4g028660 38.557 402 218 12 1 382 4 396 3.21e-80 251
MsG0280009537.01.T01 MTR_4g027450 38.557 402 218 12 1 382 4 396 3.21e-80 251
MsG0280009537.01.T01 MTR_8g046310 40.967 393 196 15 2 380 3 373 2.92e-79 248
MsG0280009537.01.T01 MTR_7g017130 37.750 400 227 12 1 386 7 398 3.85e-79 249
MsG0280009537.01.T01 MTR_8g041270 37.857 420 214 12 1 386 1 407 1.54e-78 248
MsG0280009537.01.T01 MTR_5g043605 39.474 380 157 12 8 380 21 334 1.67e-78 246
MsG0280009537.01.T01 MTR_5g097680 37.089 426 213 15 5 384 10 426 3.01e-78 248
MsG0280009537.01.T01 MTR_7g069550 39.563 412 195 18 6 386 8 396 4.09e-78 246
MsG0280009537.01.T01 MTR_5g096910 40.000 395 216 13 2 384 7 392 6.40e-78 246
MsG0280009537.01.T01 MTR_4g130330 39.500 400 207 14 9 385 4 391 8.80e-78 245
MsG0280009537.01.T01 MTR_0134s0060 37.170 417 223 11 1 384 1 411 1.19e-77 245
MsG0280009537.01.T01 MTR_5g037680 38.519 405 204 15 7 386 3 387 1.21e-77 247
MsG0280009537.01.T01 MTR_2g104340 36.700 406 220 11 4 386 6 397 1.36e-77 245
MsG0280009537.01.T01 MTR_7g017170 37.621 412 223 14 1 386 7 410 1.63e-77 245
MsG0280009537.01.T01 MTR_5g097220 38.702 416 205 12 7 386 8 409 2.80e-77 244
MsG0280009537.01.T01 MTR_1g007410 38.945 398 212 10 1 377 11 398 2.94e-77 244
MsG0280009537.01.T01 MTR_5g059430 39.234 418 201 17 6 383 20 424 8.16e-77 244
MsG0280009537.01.T01 MTR_4g028750 40.050 397 209 13 1 376 4 392 1.37e-76 242
MsG0280009537.01.T01 MTR_7g017040 37.592 407 213 12 5 386 9 399 3.21e-76 241
MsG0280009537.01.T01 MTR_5g096630 38.313 415 217 13 1 384 7 413 7.14e-76 241
MsG0280009537.01.T01 MTR_1g053510 40.777 412 197 15 2 380 4 401 1.55e-75 240
MsG0280009537.01.T01 MTR_6g090180 37.284 405 224 9 2 382 37 435 2.21e-75 240
MsG0280009537.01.T01 MTR_8g033140 37.850 428 209 13 2 386 6 419 5.92e-75 239
MsG0280009537.01.T01 MTR_5g069390 37.653 409 211 12 6 383 20 415 2.83e-74 239
MsG0280009537.01.T01 MTR_7g079640 39.153 378 194 13 11 376 12 365 2.44e-72 231
MsG0280009537.01.T01 MTR_8g046200 38.568 433 196 16 2 381 3 418 6.43e-72 231
MsG0280009537.01.T01 MTR_8g032980 37.441 422 210 10 2 379 4 415 5.95e-71 228
MsG0280009537.01.T01 MTR_2g104280 35.381 407 223 11 7 384 9 404 5.58e-68 220
MsG0280009537.01.T01 MTR_6g478230 36.855 407 206 14 9 386 24 408 2.51e-67 219
MsG0280009537.01.T01 MTR_2g064950 37.028 397 204 13 6 376 4 380 3.72e-67 218
MsG0280009537.01.T01 MTR_8g063370 37.310 394 213 12 2 376 4 382 6.18e-67 217
MsG0280009537.01.T01 MTR_8g046220 36.706 425 199 12 2 381 3 402 9.66e-67 217
MsG0280009537.01.T01 MTR_5g072060 36.802 394 185 16 10 375 4 361 8.56e-66 220
MsG0280009537.01.T01 MTR_8g063310 35.969 392 215 14 4 376 14 388 9.17e-66 214
MsG0280009537.01.T01 MTR_8g013000 39.335 361 183 11 6 342 4 352 4.05e-65 213
MsG0280009537.01.T01 MTR_7g111700 36.160 401 187 13 9 386 12 366 1.07e-64 211
MsG0280009537.01.T01 MTR_1g007430 41.420 338 161 9 22 342 6 323 1.40e-64 209
MsG0280009537.01.T01 MTR_6g090250 36.181 398 200 14 32 382 31 421 1.25e-63 209
MsG0280009537.01.T01 MTR_5g068490 43.686 293 135 13 91 380 7 272 2.53e-62 201
MsG0280009537.01.T01 MTR_5g092850 35.484 403 211 15 11 382 15 399 4.25e-62 205
MsG0280009537.01.T01 MTR_5g091140 35.878 393 202 12 1 370 37 402 5.07e-61 202
MsG0280009537.01.T01 MTR_6g078010 37.607 351 179 14 49 380 1 330 1.31e-60 199
MsG0280009537.01.T01 MTR_5g074800 36.264 364 181 17 51 386 1 341 2.08e-58 193
MsG0280009537.01.T01 MTR_8g018110 33.571 420 216 13 2 384 3 396 5.02e-58 194
MsG0280009537.01.T01 MTR_7g016930 37.346 324 163 10 5 316 9 304 5.44e-58 192
MsG0280009537.01.T01 MTR_4g014370 33.763 388 190 13 1 384 12 336 6.73e-57 189
MsG0280009537.01.T01 MTR_8g033110 33.488 430 224 14 1 384 1 414 1.22e-56 191
MsG0280009537.01.T01 MTR_8g063350 35.459 392 172 15 3 374 5 335 1.13e-55 186
MsG0280009537.01.T01 MTR_5g074850 35.411 401 201 16 2 365 25 404 4.73e-54 192
MsG0280009537.01.T01 MTR_8g033090 33.333 417 221 13 9 384 11 411 5.49e-51 176
MsG0280009537.01.T01 MTR_5g022850 33.333 405 184 17 7 386 11 354 1.38e-50 173
MsG0280009537.01.T01 MTR_5g092860 36.631 374 166 17 27 363 12 351 3.59e-50 172
MsG0280009537.01.T01 MTR_5g064700 34.211 342 176 15 83 384 35 367 4.91e-50 172
MsG0280009537.01.T01 MTR_5g086590 43.515 239 115 10 135 367 14 238 6.83e-50 168
MsG0280009537.01.T01 MTR_5g096900 36.842 323 169 11 1 302 1 309 3.12e-49 169
MsG0280009537.01.T01 MTR_5g094350 37.716 289 127 9 8 267 9 273 6.29e-49 167
MsG0280009537.01.T01 MTR_2g021920 42.437 238 111 8 165 381 37 269 1.89e-48 165
MsG0280009537.01.T01 MTR_5g075370 34.000 400 206 17 3 365 2 380 2.04e-48 175
MsG0280009537.01.T01 MTR_8g033000 34.474 380 187 14 49 384 1 362 5.19e-48 167
MsG0280009537.01.T01 MTR_7g023800 33.526 346 170 10 51 378 1 304 5.35e-48 165
MsG0280009537.01.T01 MTR_5g023970 46.073 191 96 4 197 384 9 195 3.46e-47 160
MsG0280009537.01.T01 MTR_7g104710 37.500 312 139 11 4 295 9 284 8.18e-47 162
MsG0280009537.01.T01 MTR_6g087620 35.161 310 154 10 83 376 1 279 6.60e-46 159
MsG0280009537.01.T01 MTR_6g090260 43.750 192 99 5 197 382 73 261 1.15e-45 158
MsG0280009537.01.T01 MTR_6g090260 54.839 62 27 1 1 61 8 69 7.17e-13 68.6
MsG0280009537.01.T01 MTR_6g004450 40.693 231 119 8 163 384 47 268 1.43e-44 155
MsG0280009537.01.T01 MTR_1g076810 39.076 238 129 7 4 231 10 241 1.08e-42 158
MsG0280009537.01.T01 MTR_6g079790 31.677 322 177 11 95 386 2 310 1.20e-42 151
MsG0280009537.01.T01 MTR_4g016000 42.424 231 91 10 139 350 2 209 3.47e-42 147
MsG0280009537.01.T01 MTR_5g097850 36.140 285 113 10 115 384 14 244 2.37e-41 146
MsG0280009537.01.T01 MTR_5g076490 34.925 335 155 11 83 384 31 335 3.70e-41 148
MsG0280009537.01.T01 MTR_6g070880 37.917 240 117 8 7 220 27 260 5.77e-41 145
MsG0280009537.01.T01 MTR_6g071420 37.917 240 117 8 7 220 27 260 5.77e-41 145
MsG0280009537.01.T01 MTR_3g018750 39.676 247 115 11 164 384 2 240 8.37e-39 139
MsG0280009537.01.T01 MTR_7g019250 42.291 227 93 9 160 371 219 422 6.16e-37 139
MsG0280009537.01.T01 MTR_5g037190 31.734 271 144 8 1 255 5 250 2.38e-36 133
MsG0280009537.01.T01 MTR_8g073570 43.429 175 91 5 4 176 2 170 3.52e-36 130
MsG0280009537.01.T01 MTR_5g097820 35.366 246 139 8 5 236 14 253 1.02e-35 132
MsG0280009537.01.T01 MTR_6g009350 41.753 194 97 7 165 348 8 195 1.94e-34 126
MsG0280009537.01.T01 MTR_5g098950 40.000 215 90 8 136 342 90 273 4.71e-34 127
MsG0280009537.01.T01 MTR_6g465360 35.714 238 117 8 1 208 51 282 7.67e-34 127
MsG0280009537.01.T01 MTR_3g047580 43.333 150 60 2 1 148 1 127 8.17e-33 120
MsG0280009537.01.T01 MTR_1g115205 32.946 258 111 9 4 241 25 240 1.21e-32 123
MsG0280009537.01.T01 MTR_2g104260 32.734 278 157 10 6 261 8 277 7.08e-32 122
MsG0280009537.01.T01 MTR_3g019290 36.574 216 88 8 1 205 1 178 3.07e-31 117
MsG0280009537.01.T01 MTR_7g101200 37.963 216 98 10 136 342 40 228 2.08e-28 111
MsG0280009537.01.T01 MTR_7g017150 39.130 207 113 10 183 384 68 266 2.88e-27 109
MsG0280009537.01.T01 MTR_1g050305 58.416 101 37 3 283 380 21 119 4.15e-27 105
MsG0280009537.01.T01 MTR_5g066420 42.308 130 68 2 249 374 23 149 1.54e-26 103
MsG0280009537.01.T01 MTR_5g097540 39.726 146 78 4 198 342 96 232 3.44e-26 107
MsG0280009537.01.T01 MTR_7g017120 39.175 194 107 9 198 386 80 267 3.55e-26 106
MsG0280009537.01.T01 MTR_6g079730 42.857 140 74 4 244 380 9 145 8.43e-26 102
MsG0280009537.01.T01 MTR_8g035690 34.351 262 123 11 161 384 52 302 2.22e-25 105
MsG0280009537.01.T01 MTR_5g096920 38.217 157 87 6 230 383 1 150 2.46e-25 100
MsG0280009537.01.T01 MTR_5g097660 42.735 117 63 3 267 382 4 117 2.21e-23 94.4
MsG0280009537.01.T01 MTR_3g030620 36.585 164 92 6 228 383 21 180 3.46e-23 95.9
MsG0280009537.01.T01 MTR_5g096070 38.824 170 72 6 6 173 20 159 7.72e-23 94.4
MsG0280009537.01.T01 MTR_5g097650 37.500 144 76 5 9 151 19 149 1.40e-22 93.6
MsG0280009537.01.T01 MTR_5g091150 37.714 175 75 6 117 289 43 185 1.41e-22 94.7
MsG0280009537.01.T01 MTR_1g047080 27.378 347 180 12 49 386 1 284 1.37e-21 94.0
MsG0280009537.01.T01 MTR_1g068835 22.951 366 227 12 15 360 7 337 1.08e-19 90.1
MsG0280009537.01.T01 MTR_4g070550 27.851 377 215 16 15 358 8 360 1.15e-19 90.1
MsG0280009537.01.T01 MTR_2g022020 38.793 116 66 3 266 381 6 116 2.31e-19 83.2
MsG0280009537.01.T01 MTR_2g021155 24.566 346 228 11 15 357 39 354 4.25e-19 89.7
MsG0280009537.01.T01 MTR_2g021155 23.735 257 179 6 132 379 706 954 4.11e-11 65.1
MsG0280009537.01.T01 MTR_8g041440 40.708 113 60 2 4 112 7 116 6.76e-19 82.0
MsG0280009537.01.T01 MTR_2g021050 27.273 319 178 14 15 320 8 285 6.95e-19 87.8
MsG0280009537.01.T01 MTR_2g426060 26.586 331 191 14 15 320 9 312 7.52e-19 87.8
MsG0280009537.01.T01 MTR_5g036250 59.420 69 26 1 297 365 26 92 1.83e-18 82.8
MsG0280009537.01.T01 MTR_5g057710 24.768 323 201 13 15 328 49 338 2.57e-18 86.3
MsG0280009537.01.T01 MTR_4g021785 24.672 381 233 16 15 383 12 350 4.24e-18 85.1
MsG0280009537.01.T01 MTR_2g028160 26.061 330 200 14 15 320 8 317 1.05e-17 84.7
MsG0280009537.01.T01 MTR_0667s0010 25.532 329 201 12 8 318 2 304 1.18e-17 84.3
MsG0280009537.01.T01 MTR_1g097560 26.503 366 226 17 4 362 28 357 3.19e-17 82.8
MsG0280009537.01.T01 MTR_5g057790 24.214 318 199 12 15 323 49 333 3.94e-17 82.8
MsG0280009537.01.T01 MTR_2g025420 26.100 341 186 13 15 318 9 320 4.12e-17 82.8
MsG0280009537.01.T01 MTR_2g028140 27.321 377 214 17 15 354 8 361 4.55e-17 82.8
MsG0280009537.01.T01 MTR_2g426020 26.480 321 199 10 15 320 9 307 5.64e-17 82.4
MsG0280009537.01.T01 MTR_2g426090 24.798 371 233 14 12 358 6 354 5.82e-17 82.4
MsG0280009537.01.T01 MTR_2g046900 26.243 362 218 17 14 350 30 367 6.33e-17 82.0
MsG0280009537.01.T01 MTR_4g116330 24.619 394 246 19 6 383 17 375 8.28e-17 81.6
MsG0280009537.01.T01 MTR_2g031720 26.032 315 200 11 15 320 9 299 9.02e-17 81.6
MsG0280009537.01.T01 MTR_2g021150 27.500 320 188 17 14 320 16 304 1.25e-16 80.9
MsG0280009537.01.T01 MTR_2g028110 25.627 359 224 13 15 358 7 337 1.39e-16 80.9
MsG0280009537.01.T01 MTR_0115s0020 23.797 374 217 15 15 351 13 355 1.49e-16 80.9
MsG0280009537.01.T01 MTR_2g425980 27.439 328 193 14 15 320 8 312 1.49e-16 81.3
MsG0280009537.01.T01 MTR_4g023080 23.936 376 241 15 15 383 12 349 2.38e-16 80.1
MsG0280009537.01.T01 MTR_5g086780 47.674 86 42 2 276 361 146 228 3.79e-16 77.4
MsG0280009537.01.T01 MTR_5g086780 63.265 49 18 0 4 52 8 56 4.94e-13 68.6
MsG0280009537.01.T01 MTR_4g023090 23.936 376 241 14 6 370 10 351 4.18e-16 79.7
MsG0280009537.01.T01 MTR_3g058480 27.386 241 142 9 15 242 42 262 4.45e-16 79.0
MsG0280009537.01.T01 MTR_4g094365 25.127 394 245 20 5 383 3 361 4.51e-16 79.3
MsG0280009537.01.T01 MTR_2g028130 26.901 342 199 13 15 330 8 324 5.00e-16 79.3
MsG0280009537.01.T01 MTR_2g426070 23.467 375 230 15 15 358 9 357 6.12e-16 79.3
MsG0280009537.01.T01 MTR_7g070440 23.057 386 255 13 12 380 7 367 9.03e-16 78.6
MsG0280009537.01.T01 MTR_4g024890 23.421 380 228 14 14 357 12 364 1.30e-15 78.2
MsG0280009537.01.T01 MTR_3g006670 27.457 346 202 13 15 347 52 361 1.36e-15 78.2
MsG0280009537.01.T01 MTR_6g053260 26.269 335 202 15 2 323 325 627 1.44e-15 79.0
MsG0280009537.01.T01 MTR_1g068875 25.281 356 201 17 15 346 7 321 2.89e-15 77.0
MsG0280009537.01.T01 MTR_1g037540 24.468 376 226 14 15 350 8 365 7.67e-15 75.9
MsG0280009537.01.T01 MTR_3g014540 23.362 351 229 10 15 357 32 350 7.91e-15 75.9
MsG0280009537.01.T01 MTR_2g031640 24.309 362 217 14 15 354 9 335 8.19e-15 75.9
MsG0280009537.01.T01 MTR_3g083010 26.036 338 193 16 15 320 9 321 8.77e-15 75.9
MsG0280009537.01.T01 MTR_0044s0300 25.146 342 208 15 15 347 41 343 1.00e-14 75.5
MsG0280009537.01.T01 MTR_3g014570 25.237 317 195 11 15 321 32 316 1.16e-14 75.1
MsG0280009537.01.T01 MTR_4g055060 25.000 316 206 11 15 323 33 324 1.65e-14 74.7
MsG0280009537.01.T01 MTR_2g024110 24.522 314 198 13 15 318 7 291 1.88e-14 74.7
MsG0280009537.01.T01 MTR_8g101580 27.184 309 189 14 16 318 50 328 2.08e-14 74.7
MsG0280009537.01.T01 MTR_3g007410 25.069 363 231 15 15 367 55 386 2.71e-14 74.3
MsG0280009537.01.T01 MTR_4g023070 23.410 346 214 13 15 338 6 322 3.15e-14 73.9
MsG0280009537.01.T01 MTR_2g046920 24.234 359 221 15 14 350 26 355 3.28e-14 73.9
MsG0280009537.01.T01 MTR_2g046830 25.641 312 195 13 12 317 25 305 3.31e-14 73.9
MsG0280009537.01.T01 MTR_3g047540 46.575 73 35 2 195 267 2 70 3.62e-14 68.2
MsG0280009537.01.T01 MTR_3g036335 23.410 346 212 17 15 347 44 349 4.01e-14 73.6
MsG0280009537.01.T01 MTR_5g057690 23.364 321 188 14 15 323 49 323 4.49e-14 73.6
MsG0280009537.01.T01 MTR_3g058470 25.915 328 169 15 15 326 40 309 5.16e-14 73.2
MsG0280009537.01.T01 MTR_3g013740 23.985 271 165 9 7 257 39 288 5.39e-14 73.6
MsG0280009537.01.T01 MTR_4g023120 23.052 308 203 10 15 316 6 285 5.84e-14 73.2
MsG0280009537.01.T01 MTR_3g007360 25.552 317 194 13 15 321 55 339 8.62e-14 72.8
MsG0280009537.01.T01 MTR_3g024040 27.362 307 178 17 20 321 39 305 9.41e-14 72.4
MsG0280009537.01.T01 MTR_2g026010 26.367 311 188 17 78 360 46 343 1.43e-13 72.0
MsG0280009537.01.T01 MTR_3g013770 25.145 346 203 14 5 329 22 332 1.66e-13 71.6
MsG0280009537.01.T01 MTR_8g099460 24.922 321 199 12 15 320 8 301 2.41e-13 71.2
MsG0280009537.01.T01 MTR_4g030090 25.444 338 207 14 14 330 16 329 2.48e-13 71.2
MsG0280009537.01.T01 MTR_5g070130 24.242 396 253 16 4 381 3 369 2.97e-13 70.9
MsG0280009537.01.T01 MTR_3g036290 24.776 335 209 15 15 347 25 318 3.25e-13 70.5
MsG0280009537.01.T01 MTR_2g047832 23.773 387 208 16 14 350 31 380 6.16e-13 70.1
MsG0280009537.01.T01 MTR_3g009260 24.058 345 204 14 15 347 44 342 6.41e-13 70.1
MsG0280009537.01.T01 MTR_8g013010 26.102 295 179 15 4 287 43 309 8.34e-13 68.9
MsG0280009537.01.T01 MTR_3g030330 23.590 390 242 19 1 375 1 349 9.52e-13 69.3
MsG0280009537.01.T01 MTR_5g097210 24.425 348 193 16 15 338 12 313 9.61e-13 69.3
MsG0280009537.01.T01 MTR_3g006500 23.659 317 195 14 15 320 20 300 9.86e-13 69.3
MsG0280009537.01.T01 MTR_3g036430 21.935 310 185 12 15 323 23 276 1.18e-12 68.9
MsG0280009537.01.T01 MTR_4g024870 24.017 229 152 8 14 236 46 258 1.19e-12 69.3
MsG0280009537.01.T01 MTR_4g006270 24.921 317 178 12 15 320 7 274 1.42e-12 68.9
MsG0280009537.01.T01 MTR_8g102520 26.923 260 156 10 137 381 75 315 1.50e-12 68.2
MsG0280009537.01.T01 MTR_0128s0070 25.735 272 164 12 14 267 24 275 1.68e-12 68.6
MsG0280009537.01.T01 MTR_5g007610 24.507 355 209 15 15 347 44 361 2.01e-12 68.6
MsG0280009537.01.T01 MTR_4g116330 25.847 236 146 11 6 236 17 228 2.02e-12 68.2
MsG0280009537.01.T01 MTR_1g097490 24.658 365 231 14 2 357 39 368 2.12e-12 68.6
MsG0280009537.01.T01 MTR_4g030830 22.105 380 213 15 15 346 12 356 2.80e-12 68.2
MsG0280009537.01.T01 MTR_3g007430 23.248 314 202 13 15 320 46 328 2.97e-12 67.8
MsG0280009537.01.T01 MTR_5g022420 25.077 323 201 15 3 320 14 300 3.90e-12 67.4
MsG0280009537.01.T01 MTR_6g017280 26.807 332 190 17 14 321 11 313 4.08e-12 67.4
MsG0280009537.01.T01 MTR_0128s0020 24.908 273 166 12 14 267 20 272 4.17e-12 67.4
MsG0280009537.01.T01 MTR_3g030240 23.446 354 218 15 15 357 43 354 4.31e-12 67.4
MsG0280009537.01.T01 MTR_8g062660 25.000 340 193 17 15 331 25 325 4.34e-12 68.2
MsG0280009537.01.T01 MTR_1g442850 26.471 340 182 16 12 321 5 306 6.51e-12 67.0
MsG0280009537.01.T01 MTR_5g048160 22.414 406 254 13 15 382 7 389 1.06e-11 66.2
MsG0280009537.01.T01 MTR_2g055970 25.538 325 197 17 4 317 203 493 1.25e-11 66.6
MsG0280009537.01.T01 MTR_3g058440 26.667 255 151 13 15 257 38 268 1.74e-11 65.1
MsG0280009537.01.T01 MTR_4g107780 23.515 404 242 17 7 386 31 391 1.89e-11 65.5
MsG0280009537.01.T01 MTR_4g107820 23.515 404 242 17 7 386 31 391 2.05e-11 65.5
MsG0280009537.01.T01 MTR_6g053240 23.364 321 200 12 15 320 31 320 2.46e-11 65.1
MsG0280009537.01.T01 MTR_6g087660 30.645 186 101 7 5 163 10 194 3.45e-11 62.4
MsG0280009537.01.T01 MTR_5g046300 23.270 318 201 14 15 325 7 288 3.84e-11 64.3
MsG0280009537.01.T01 MTR_5g046290 23.270 318 201 14 15 325 7 288 3.84e-11 64.3
MsG0280009537.01.T01 MTR_3g007330 23.750 320 205 15 15 329 51 336 4.64e-11 64.3
MsG0280009537.01.T01 MTR_2g031700 25.296 253 150 11 14 258 8 229 7.54e-11 62.8
MsG0280009537.01.T01 MTR_5g097730 63.889 36 13 0 310 345 18 53 8.58e-11 57.8
MsG0280009537.01.T01 MTR_1g054575 26.687 326 192 16 1 317 41 328 8.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009537.01.T01 AT3G16210 27.092 251 143 12 8 256 1 213 3.09e-17 82.8
MsG0280009537.01.T01 AT3G21410 24.377 361 212 18 20 363 46 362 1.77e-14 74.7
MsG0280009537.01.T01 AT2G16810 26.894 264 173 8 8 270 37 281 5.76e-13 69.3
MsG0280009537.01.T01 AT3G10790 25.532 235 156 8 20 250 36 255 4.14e-11 63.9

Find 82 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAGTTGTATTTGCTTTC+TGG 0.109597 2:+53970681 MsG0280009537.01.T01:CDS
TAAAACATGTTAATGAAATA+AGG 0.140860 2:-53970576 None:intergenic
GATACATCCGAGCCTTATTT+TGG 0.146288 2:-53970887 None:intergenic
GTAGGTTTACTACTGCTTTA+TGG 0.162694 2:+53970832 MsG0280009537.01.T01:CDS
TTTGATTCACACGATTTAAA+AGG 0.197663 2:+53971236 MsG0280009537.01.T01:CDS
GGTTCTATGGTGTACTTAAA+TGG 0.198117 2:+53971113 MsG0280009537.01.T01:CDS
CCACATATCAATATCAGTTT+TGG 0.203667 2:+53971334 MsG0280009537.01.T01:CDS
CTTCAGTATGTTATTTATAT+TGG 0.208589 2:+53970975 MsG0280009537.01.T01:CDS
AGACACTTGACAATGTTAAA+TGG 0.255052 2:+53971266 MsG0280009537.01.T01:CDS
TTGCACCACCCGGCCCCTAT+TGG 0.275982 2:+53971015 MsG0280009537.01.T01:CDS
GAACATGGTTACTAACCTTT+TGG 0.317179 2:-53970455 None:intergenic
AAAACATGTTAATGAAATAA+GGG 0.348792 2:-53970575 None:intergenic
TAGACTATATATATCCCAAT+AGG 0.351397 2:-53971030 None:intergenic
CTGGAGTAATTCAGAACATT+GGG 0.353271 2:+53971501 MsG0280009537.01.T01:CDS
GTTCTATGGTGTACTTAAAT+GGG 0.355733 2:+53971114 MsG0280009537.01.T01:CDS
CCTGATAATAGCCATGGTTT+TGG 0.365259 2:-53970752 None:intergenic
GTCGCTCGGTTTACTTGTTT+AGG 0.367592 2:+53970525 MsG0280009537.01.T01:CDS
GACACCACAAATGTTTCAAT+TGG 0.372308 2:-53971170 None:intergenic
TACTATCAAAATAGTTTAGA+AGG 0.372781 2:-53970647 None:intergenic
TTTGACTTCGGAAGGTTCTA+TGG 0.385347 2:+53971100 MsG0280009537.01.T01:CDS
TGCACCACCCGGCCCCTATT+GGG 0.385640 2:+53971016 MsG0280009537.01.T01:CDS
CCAAAACCATGGCTATTATC+AGG 0.385953 2:+53970752 MsG0280009537.01.T01:CDS
AGACTATATATATCCCAATA+GGG 0.388408 2:-53971029 None:intergenic
TTACTTGTTTAGGAAAATCT+TGG 0.396738 2:+53970535 MsG0280009537.01.T01:CDS
GCTTGTCTTGATTTAACTAC+TGG 0.397331 2:+53971482 MsG0280009537.01.T01:CDS
TTCGATGTTGGACCCATGTC+CGG 0.409372 2:+53971392 MsG0280009537.01.T01:CDS
TCCGGCATTGACCATCCTAT+TGG 0.409587 2:+53971410 MsG0280009537.01.T01:CDS
CCCTTCTTCCCTGCTCCAAT+AGG 0.422707 2:-53971425 None:intergenic
GATCAGAGGAATAAAGCATT+AGG 0.425699 2:+53971580 MsG0280009537.01.T01:CDS
ATGATACAGTGAGTGATGTT+TGG 0.426486 2:-53970613 None:intergenic
TCATGTTAGAGATGATTATA+AGG 0.446549 2:+53970950 MsG0280009537.01.T01:CDS
TAAATGGGGTTTGCCATTGG+TGG 0.446728 2:+53971129 MsG0280009537.01.T01:CDS
TCAACCAATTGAAACATTTG+TGG 0.457127 2:+53971166 MsG0280009537.01.T01:CDS
AAATGGGGTTTGCCATTGGT+GGG 0.458430 2:+53971130 MsG0280009537.01.T01:CDS
AAGGGAAATAGAGTGGTAAC+AGG 0.459800 2:-53971215 None:intergenic
TCCTATTGGAGCAGGGAAGA+AGG 0.465728 2:+53971424 MsG0280009537.01.T01:CDS
TTGATTCACACGATTTAAAA+GGG 0.470609 2:+53971237 MsG0280009537.01.T01:CDS
TTGTATTTGCTTTCTGGTGA+GGG 0.483820 2:+53970687 MsG0280009537.01.T01:CDS
TTTAAATCGTGTGAATCAAA+GGG 0.483828 2:-53971233 None:intergenic
ACTTAAATGGGGTTTGCCAT+TGG 0.484681 2:+53971126 MsG0280009537.01.T01:CDS
ATTGACCATCCTATTGGAGC+AGG 0.500600 2:+53971416 MsG0280009537.01.T01:CDS
AGGATGGTCAATGCCGGACA+TGG 0.502559 2:-53971405 None:intergenic
GATATTGATATGTGGAAAGA+AGG 0.503704 2:-53971326 None:intergenic
CAACGTTATTTGACTTCGGA+AGG 0.509861 2:+53971092 MsG0280009537.01.T01:CDS
ATATATATCCCAATAGGGGC+CGG 0.522084 2:-53971024 None:intergenic
AACCCGGTGTCAATGAATCA+TGG 0.523375 2:+53971360 MsG0280009537.01.T01:CDS
TATGGCTCCAACAAACCAAA+AGG 0.525712 2:+53970440 None:intergenic
TAATGCTTTATTCCTCTGAT+CGG 0.528914 2:-53971578 None:intergenic
GTTGTATTTGCTTTCTGGTG+AGG 0.530759 2:+53970686 MsG0280009537.01.T01:CDS
CAACATAAAGTTTCTTCCAA+CGG 0.533387 2:-53971061 None:intergenic
GCAAAGAGTTCCATTAATAC+CGG 0.536287 2:-53970793 None:intergenic
TAACAGGCACCTCATTTGAC+AGG 0.538994 2:-53971199 None:intergenic
AATGGGGTTTGCCATTGGTG+GGG 0.540748 2:+53971131 MsG0280009537.01.T01:CDS
ACTGGAGTAATTCAGAACAT+TGG 0.543687 2:+53971500 MsG0280009537.01.T01:CDS
CCAAAACTGATATTGATATG+TGG 0.547153 2:-53971334 None:intergenic
TCTTCCCTGCTCCAATAGGA+TGG 0.548169 2:-53971421 None:intergenic
TACCTTTGAAATCTGTCGCT+CGG 0.548769 2:+53970511 MsG0280009537.01.T01:CDS
GCCACAACGTTATTTGACTT+CGG 0.549038 2:+53971088 MsG0280009537.01.T01:CDS
CCTATTGGAGCAGGGAAGAA+GGG 0.550522 2:+53971425 MsG0280009537.01.T01:CDS
AATCCATGATTCATTGACAC+CGG 0.564496 2:-53971363 None:intergenic
TGATATGTGGAAAGAAGGAC+TGG 0.566760 2:-53971321 None:intergenic
TATATATCCCAATAGGGGCC+GGG 0.567673 2:-53971023 None:intergenic
TCCAATAGGATGGTCAATGC+CGG 0.572310 2:-53971411 None:intergenic
TTCTATGGTGTACTTAAATG+GGG 0.582197 2:+53971115 MsG0280009537.01.T01:CDS
ATCCATGATTCATTGACACC+GGG 0.586737 2:-53971362 None:intergenic
GACTATATATATCCCAATAG+GGG 0.597645 2:-53971028 None:intergenic
TTACAGCCTGATAATAGCCA+TGG 0.599699 2:-53970758 None:intergenic
TTATTCCCCAAAATAAGGCT+CGG 0.603120 2:+53970880 MsG0280009537.01.T01:CDS
GCATCTATGATAATGACCGT+AGG 0.604292 2:+53970814 MsG0280009537.01.T01:CDS
CAATATAAATAACATACTGA+AGG 0.605079 2:-53970974 None:intergenic
GGATGGTCAATGCCGGACAT+GGG 0.609451 2:-53971404 None:intergenic
TGTGATAGTGTTGCACCACC+CGG 0.619714 2:+53971005 MsG0280009537.01.T01:CDS
ATAAAGCAGTAGTAAACCTA+CGG 0.620647 2:-53970830 None:intergenic
TGAATCAAAGGGAAATAGAG+TGG 0.629025 2:-53971222 None:intergenic
ATAGTCTACGAAGTAACCGT+TGG 0.629941 2:+53971045 MsG0280009537.01.T01:CDS
TTTATGGAATCCAGCTACTG+AGG 0.641129 2:+53970848 MsG0280009537.01.T01:CDS
TCCGAAGTCAAATAACGTTG+TGG 0.651506 2:-53971089 None:intergenic
TTGACCATCCTATTGGAGCA+GGG 0.659323 2:+53971417 MsG0280009537.01.T01:CDS
TGGAGTAATTCAGAACATTG+GGG 0.659967 2:+53971502 MsG0280009537.01.T01:CDS
AGACGATATCATCAAGAACA+TGG 0.662021 2:-53970470 None:intergenic
AACCGAGCGACAGATTTCAA+AGG 0.669985 2:-53970513 None:intergenic
ATATCCCAATAGGGGCCGGG+TGG 0.686400 2:-53971020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATGTTAATGAAATAA+GGG - Chr2:53970578-53970597 None:intergenic 15.0%
!! TAAAACATGTTAATGAAATA+AGG - Chr2:53970579-53970598 None:intergenic 15.0%
!! AAAAATTATTCCCCAAAATA+AGG + Chr2:53970875-53970894 MsG0280009537.01.T01:CDS 20.0%
!! CAATATAAATAACATACTGA+AGG - Chr2:53970977-53970996 None:intergenic 20.0%
!! TACTATCAAAATAGTTTAGA+AGG - Chr2:53970650-53970669 None:intergenic 20.0%
!!! CATTTTAATATTCATGGATT+TGG + Chr2:53970921-53970940 MsG0280009537.01.T01:CDS 20.0%
!!! CTTCAGTATGTTATTTATAT+TGG + Chr2:53970975-53970994 MsG0280009537.01.T01:CDS 20.0%
!!! GAAACTCATTTTAATATTCA+TGG + Chr2:53970915-53970934 MsG0280009537.01.T01:CDS 20.0%
! AGACTATATATATCCCAATA+GGG - Chr2:53971032-53971051 None:intergenic 25.0%
! TAGACTATATATATCCCAAT+AGG - Chr2:53971033-53971052 None:intergenic 25.0%
! TCATGTTAGAGATGATTATA+AGG + Chr2:53970950-53970969 MsG0280009537.01.T01:CDS 25.0%
! TTACTTGTTTAGGAAAATCT+TGG + Chr2:53970535-53970554 MsG0280009537.01.T01:CDS 25.0%
! TTGATTCACACGATTTAAAA+GGG + Chr2:53971237-53971256 MsG0280009537.01.T01:CDS 25.0%
! TTTAAATCGTGTGAATCAAA+GGG - Chr2:53971236-53971255 None:intergenic 25.0%
! TTTGATTCACACGATTTAAA+AGG + Chr2:53971236-53971255 MsG0280009537.01.T01:CDS 25.0%
!! CACATATCAATATCAGTTTT+GGG + Chr2:53971335-53971354 MsG0280009537.01.T01:CDS 25.0%
!! TTTTAAATCGTGTGAATCAA+AGG - Chr2:53971237-53971256 None:intergenic 25.0%
!!! ATCTTTTTGAGAAAAGATGA+TGG + Chr2:53971452-53971471 MsG0280009537.01.T01:CDS 25.0%
!!! ATTTTAAGTTCCGGTATTAA+TGG + Chr2:53970783-53970802 MsG0280009537.01.T01:CDS 25.0%
AAAAATATCATTCCGATCAG+AGG + Chr2:53971566-53971585 MsG0280009537.01.T01:CDS 30.0%
AGACACTTGACAATGTTAAA+TGG + Chr2:53971266-53971285 MsG0280009537.01.T01:CDS 30.0%
ATAAAGCAGTAGTAAACCTA+CGG - Chr2:53970833-53970852 None:intergenic 30.0%
CAACATAAAGTTTCTTCCAA+CGG - Chr2:53971064-53971083 None:intergenic 30.0%
CCAAAACTGATATTGATATG+TGG - Chr2:53971337-53971356 None:intergenic 30.0%
GACTATATATATCCCAATAG+GGG - Chr2:53971031-53971050 None:intergenic 30.0%
GATATTGATATGTGGAAAGA+AGG - Chr2:53971329-53971348 None:intergenic 30.0%
GTTCTATGGTGTACTTAAAT+GGG + Chr2:53971114-53971133 MsG0280009537.01.T01:CDS 30.0%
TCAAAGTTGTATTTGCTTTC+TGG + Chr2:53970681-53970700 MsG0280009537.01.T01:CDS 30.0%
TCAACCAATTGAAACATTTG+TGG + Chr2:53971166-53971185 MsG0280009537.01.T01:CDS 30.0%
TTCTATGGTGTACTTAAATG+GGG + Chr2:53971115-53971134 MsG0280009537.01.T01:CDS 30.0%
! CCACATATCAATATCAGTTT+TGG + Chr2:53971334-53971353 MsG0280009537.01.T01:CDS 30.0%
! TAATGCTTTATTCCTCTGAT+CGG - Chr2:53971581-53971600 None:intergenic 30.0%
!! ATTTTTATTTCCTCAGTAGC+TGG - Chr2:53970861-53970880 None:intergenic 30.0%
!!! GCTGTAAGTATTTTAAGTTC+CGG + Chr2:53970774-53970793 MsG0280009537.01.T01:CDS 30.0%
!!! TTACTAACCTTTTGGTTTGT+TGG - Chr2:53970450-53970469 None:intergenic 30.0%
AATCCATGATTCATTGACAC+CGG - Chr2:53971366-53971385 None:intergenic 35.0%
ACTGGAGTAATTCAGAACAT+TGG + Chr2:53971500-53971519 MsG0280009537.01.T01:CDS 35.0%
AGACGATATCATCAAGAACA+TGG - Chr2:53970473-53970492 None:intergenic 35.0%
ATGATACAGTGAGTGATGTT+TGG - Chr2:53970616-53970635 None:intergenic 35.0%
CTGGAGTAATTCAGAACATT+GGG + Chr2:53971501-53971520 MsG0280009537.01.T01:CDS 35.0%
GACACCACAAATGTTTCAAT+TGG - Chr2:53971173-53971192 None:intergenic 35.0%
GCAAAGAGTTCCATTAATAC+CGG - Chr2:53970796-53970815 None:intergenic 35.0%
GCTTGTCTTGATTTAACTAC+TGG + Chr2:53971482-53971501 MsG0280009537.01.T01:CDS 35.0%
GGTTCTATGGTGTACTTAAA+TGG + Chr2:53971113-53971132 MsG0280009537.01.T01:CDS 35.0%
GTAGGTTTACTACTGCTTTA+TGG + Chr2:53970832-53970851 MsG0280009537.01.T01:CDS 35.0%
TGAATCAAAGGGAAATAGAG+TGG - Chr2:53971225-53971244 None:intergenic 35.0%
TGGAGTAATTCAGAACATTG+GGG + Chr2:53971502-53971521 MsG0280009537.01.T01:CDS 35.0%
TTATTCCCCAAAATAAGGCT+CGG + Chr2:53970880-53970899 MsG0280009537.01.T01:CDS 35.0%
! GAACATGGTTACTAACCTTT+TGG - Chr2:53970458-53970477 None:intergenic 35.0%
! GTCTTTTAACCTGTCAAATG+AGG + Chr2:53971190-53971209 MsG0280009537.01.T01:CDS 35.0%
! TGGATTAAGCTTTTCGATGT+TGG + Chr2:53971380-53971399 MsG0280009537.01.T01:CDS 35.0%
! TTGTATTTGCTTTCTGGTGA+GGG + Chr2:53970687-53970706 MsG0280009537.01.T01:CDS 35.0%
!!! ATACATCCGAGCCTTATTTT+GGG - Chr2:53970889-53970908 None:intergenic 35.0%
AAGGGAAATAGAGTGGTAAC+AGG - Chr2:53971218-53971237 None:intergenic 40.0%
ACTTAAATGGGGTTTGCCAT+TGG + Chr2:53971126-53971145 MsG0280009537.01.T01:CDS 40.0%
ATAGTCTACGAAGTAACCGT+TGG + Chr2:53971045-53971064 MsG0280009537.01.T01:CDS 40.0%
ATATATATCCCAATAGGGGC+CGG - Chr2:53971027-53971046 None:intergenic 40.0%
ATCCATGATTCATTGACACC+GGG - Chr2:53971365-53971384 None:intergenic 40.0%
CCAAAACCATGGCTATTATC+AGG + Chr2:53970752-53970771 MsG0280009537.01.T01:CDS 40.0%
TCCGAAGTCAAATAACGTTG+TGG - Chr2:53971092-53971111 None:intergenic 40.0%
TGATATGTGGAAAGAAGGAC+TGG - Chr2:53971324-53971343 None:intergenic 40.0%
TTACAGCCTGATAATAGCCA+TGG - Chr2:53970761-53970780 None:intergenic 40.0%
TTTATGGAATCCAGCTACTG+AGG + Chr2:53970848-53970867 MsG0280009537.01.T01:CDS 40.0%
! CAACGTTATTTGACTTCGGA+AGG + Chr2:53971092-53971111 MsG0280009537.01.T01:CDS 40.0%
! CATCCTTTTGACCAAAACCA+TGG + Chr2:53970741-53970760 MsG0280009537.01.T01:CDS 40.0%
! CCTGATAATAGCCATGGTTT+TGG - Chr2:53970755-53970774 None:intergenic 40.0%
! GATATGTTTTTCCCCACCAA+TGG - Chr2:53971145-53971164 None:intergenic 40.0%
! GCATCTATGATAATGACCGT+AGG + Chr2:53970814-53970833 MsG0280009537.01.T01:CDS 40.0%
! GCCACAACGTTATTTGACTT+CGG + Chr2:53971088-53971107 MsG0280009537.01.T01:CDS 40.0%
! GTTGTATTTGCTTTCTGGTG+AGG + Chr2:53970686-53970705 MsG0280009537.01.T01:CDS 40.0%
! TTTGACTTCGGAAGGTTCTA+TGG + Chr2:53971100-53971119 MsG0280009537.01.T01:CDS 40.0%
!! TACCTTTGAAATCTGTCGCT+CGG + Chr2:53970511-53970530 MsG0280009537.01.T01:CDS 40.0%
!!! ATATCAGTTTTGGGAGAACC+CGG + Chr2:53971344-53971363 MsG0280009537.01.T01:CDS 40.0%
!!! GATACATCCGAGCCTTATTT+TGG - Chr2:53970890-53970909 None:intergenic 40.0%
!!! TACATCCGAGCCTTATTTTG+GGG - Chr2:53970888-53970907 None:intergenic 40.0%
!!! TAGCCATGGTTTTGGTCAAA+AGG - Chr2:53970747-53970766 None:intergenic 40.0%
!!! TGGTTTTGGTCAAAAGGATG+TGG - Chr2:53970741-53970760 None:intergenic 40.0%
AAATGGGGTTTGCCATTGGT+GGG + Chr2:53971130-53971149 MsG0280009537.01.T01:CDS 45.0%
AACCGAGCGACAGATTTCAA+AGG - Chr2:53970516-53970535 None:intergenic 45.0%
ATTGACCATCCTATTGGAGC+AGG + Chr2:53971416-53971435 MsG0280009537.01.T01:CDS 45.0%
GTCGCTCGGTTTACTTGTTT+AGG + Chr2:53970525-53970544 MsG0280009537.01.T01:CDS 45.0%
TAAATGGGGTTTGCCATTGG+TGG + Chr2:53971129-53971148 MsG0280009537.01.T01:CDS 45.0%
TAACAGGCACCTCATTTGAC+AGG - Chr2:53971202-53971221 None:intergenic 45.0%
TATATATCCCAATAGGGGCC+GGG - Chr2:53971026-53971045 None:intergenic 45.0%
TCCAATAGGATGGTCAATGC+CGG - Chr2:53971414-53971433 None:intergenic 45.0%
TTGACCATCCTATTGGAGCA+GGG + Chr2:53971417-53971436 MsG0280009537.01.T01:CDS 45.0%
! AACCCGGTGTCAATGAATCA+TGG + Chr2:53971360-53971379 MsG0280009537.01.T01:CDS 45.0%
AATGGGGTTTGCCATTGGTG+GGG + Chr2:53971131-53971150 MsG0280009537.01.T01:CDS 50.0%
CCTATTGGAGCAGGGAAGAA+GGG + Chr2:53971425-53971444 MsG0280009537.01.T01:CDS 50.0%
TCCTATTGGAGCAGGGAAGA+AGG + Chr2:53971424-53971443 MsG0280009537.01.T01:CDS 50.0%
TCTTCCCTGCTCCAATAGGA+TGG - Chr2:53971424-53971443 None:intergenic 50.0%
TTCGATGTTGGACCCATGTC+CGG + Chr2:53971392-53971411 MsG0280009537.01.T01:CDS 50.0%
! TGTGATAGTGTTGCACCACC+CGG + Chr2:53971005-53971024 MsG0280009537.01.T01:CDS 50.0%
!! TCCGGCATTGACCATCCTAT+TGG + Chr2:53971410-53971429 MsG0280009537.01.T01:CDS 50.0%
AGGATGGTCAATGCCGGACA+TGG - Chr2:53971408-53971427 None:intergenic 55.0%
CCCTTCTTCCCTGCTCCAAT+AGG - Chr2:53971428-53971447 None:intergenic 55.0%
GGATGGTCAATGCCGGACAT+GGG - Chr2:53971407-53971426 None:intergenic 55.0%
ATATCCCAATAGGGGCCGGG+TGG - Chr2:53971023-53971042 None:intergenic 60.0%
TGCACCACCCGGCCCCTATT+GGG + Chr2:53971016-53971035 MsG0280009537.01.T01:CDS 65.0%
TTGCACCACCCGGCCCCTAT+TGG + Chr2:53971015-53971034 MsG0280009537.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 53970441 53971601 53970441 ID=MsG0280009537.01;Name=MsG0280009537.01
Chr2 mRNA 53970441 53971601 53970441 ID=MsG0280009537.01.T01;Parent=MsG0280009537.01;Name=MsG0280009537.01.T01;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|386
Chr2 exon 53970441 53971601 53970441 ID=MsG0280009537.01.T01:exon:6095;Parent=MsG0280009537.01.T01
Chr2 CDS 53970441 53971601 53970441 ID=MsG0280009537.01.T01:cds;Parent=MsG0280009537.01.T01
Gene Sequence

>MsG0280009537.01.T01

ATGGCTCCAACAAACCAAAAGGTTAGTAACCATGTTCTTGATGATATCGTCTTCTCTGTTTTCTCAAAACTACCTTTGAAATCTGTCGCTCGGTTTACTTGTTTAGGAAAATCTTGGTCTACTTTATTTGAAAACCCTTATTTCATTAACATGTTTTACAAACATATTGTTTCCAAACATCACTCACTGTATCATGAAGCATGTCTCCTTCTAAACTATTTTGATAGTACTGAGAATCAATCAAAGTTGTATTTGCTTTCTGGTGAGGGATCTGAGAACAAAGTTCAAATGAAGTTGCCACATCCTTTTGACCAAAACCATGGCTATTATCAGGCTGTAAGTATTTTAAGTTCCGGTATTAATGGAACTCTTTGCATCTATGATAATGACCGTAGGTTTACTACTGCTTTATGGAATCCAGCTACTGAGGAAATAAAAATTATTCCCCAAAATAAGGCTCGGATGTATCAATTAGAAACTCATTTTAATATTCATGGATTTGGTTATGATCATGTTAGAGATGATTATAAGGTCCTTCAGTATGTTATTTATATTGGAGATGATTGTGATAGTGTTGCACCACCCGGCCCCTATTGGGATATATATAGTCTACGAAGTAACCGTTGGAAGAAACTTTATGTTGATATGCCACAACGTTATTTGACTTCGGAAGGTTCTATGGTGTACTTAAATGGGGTTTGCCATTGGTGGGGAAAAACATATCGTCAACCAATTGAAACATTTGTGGTGTCTTTTAACCTGTCAAATGAGGTGCCTGTTACCACTCTATTTCCCTTTGATTCACACGATTTAAAAGGGTTCAAAAGACACTTGACAATGTTAAATGGTTTTGTTGCTATGATTGTAACTTATGTGAAGACCAGTCCTTCTTTCCACATATCAATATCAGTTTTGGGAGAACCCGGTGTCAATGAATCATGGATTAAGCTTTTCGATGTTGGACCCATGTCCGGCATTGACCATCCTATTGGAGCAGGGAAGAAGGGTGATATCTTTTTGAGAAAAGATGATGGTGAACTTGCTTGTCTTGATTTAACTACTGGAGTAATTCAGAACATTGGGGTTAATGCTGAAAAATATCGTTCTCAAACAGTAATTTACAACAAAAATATCATTCCGATCAGAGGAATAAAGCATTAG
Protein sequence

>MsG0280009537.01.T01

MAPTNQKVSNHVLDDIVFSVFSKLPLKSVARFTCLGKSWSTLFENPYFINMFYKHIVSKHHSLYHEACLLLNYFDSTENQSKLYLLSGEGSENKVQMKLPHPFDQNHGYYQAVSILSSGINGTLCIYDNDRRFTTALWNPATEEIKIIPQNKARMYQLETHFNIHGFGYDHVRDDYKVLQYVIYIGDDCDSVAPPGPYWDIYSLRSNRWKKLYVDMPQRYLTSEGSMVYLNGVCHWWGKTYRQPIETFVVSFNLSNEVPVTTLFPFDSHDLKGFKRHLTMLNGFVAMIVTYVKTSPSFHISISVLGEPGVNESWIKLFDVGPMSGIDHPIGAGKKGDIFLRKDDGELACLDLTTGVIQNIGVNAEKYRSQTVIYNKNIIPIRGIKH*