Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036698.01.T01 | XP_003621564.1 | 83.761 | 351 | 53 | 1 | 1 | 351 | 1 | 347 | 0 | 593 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036698.01.T01 | Q8GXC7 | 21.143 | 350 | 210 | 11 | 21 | 335 | 39 | 357 | 1.50E-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036698.01.T01 | A2Q609 | 83.761 | 351 | 53 | 1 | 1 | 351 | 1 | 347 | 0.0 | 593 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036698.01.T01 | MTR_7g017170 | 83.761 | 351 | 53 | 1 | 1 | 351 | 1 | 347 | 0.0 | 593 |
| MsG0780036698.01.T01 | MTR_7g017130 | 83.761 | 351 | 53 | 1 | 1 | 351 | 1 | 347 | 0.0 | 592 |
| MsG0780036698.01.T01 | MTR_5g037190 | 80.812 | 271 | 32 | 1 | 3 | 273 | 1 | 251 | 4.04e-152 | 428 |
| MsG0780036698.01.T01 | MTR_7g017040 | 53.239 | 355 | 153 | 3 | 3 | 351 | 1 | 348 | 4.17e-115 | 340 |
| MsG0780036698.01.T01 | MTR_7g016930 | 52.121 | 330 | 132 | 3 | 3 | 332 | 1 | 304 | 7.23e-105 | 311 |
| MsG0780036698.01.T01 | MTR_8g063440 | 45.977 | 348 | 170 | 9 | 7 | 351 | 1 | 333 | 6.17e-91 | 277 |
| MsG0780036698.01.T01 | MTR_2g022000 | 43.716 | 366 | 186 | 6 | 3 | 349 | 1 | 365 | 9.50e-91 | 279 |
| MsG0780036698.01.T01 | MTR_2g038680 | 45.753 | 365 | 173 | 10 | 3 | 349 | 1 | 358 | 5.50e-89 | 273 |
| MsG0780036698.01.T01 | MTR_5g097330 | 45.556 | 360 | 173 | 9 | 3 | 349 | 1 | 350 | 1.31e-86 | 267 |
| MsG0780036698.01.T01 | MTR_8g012090 | 45.179 | 363 | 137 | 8 | 3 | 351 | 1 | 315 | 8.38e-86 | 263 |
| MsG0780036698.01.T01 | MTR_6g086825 | 45.892 | 353 | 164 | 11 | 16 | 351 | 68 | 410 | 1.19e-85 | 266 |
| MsG0780036698.01.T01 | MTR_5g097680 | 42.359 | 373 | 179 | 9 | 4 | 343 | 3 | 372 | 2.04e-83 | 259 |
| MsG0780036698.01.T01 | MTR_4g028510 | 46.448 | 366 | 162 | 14 | 5 | 351 | 2 | 352 | 2.75e-83 | 260 |
| MsG0780036698.01.T01 | MTR_2g021800 | 42.234 | 367 | 191 | 6 | 3 | 349 | 1 | 366 | 3.28e-83 | 259 |
| MsG0780036698.01.T01 | MTR_4g055820 | 43.697 | 357 | 177 | 7 | 8 | 349 | 4 | 351 | 5.01e-83 | 256 |
| MsG0780036698.01.T01 | MTR_0129s0070 | 44.068 | 354 | 180 | 9 | 3 | 349 | 2 | 344 | 3.36e-82 | 256 |
| MsG0780036698.01.T01 | MTR_2g021950 | 43.820 | 356 | 182 | 7 | 3 | 349 | 1 | 347 | 1.43e-81 | 254 |
| MsG0780036698.01.T01 | MTR_2g104340 | 45.455 | 363 | 166 | 12 | 3 | 350 | 1 | 346 | 2.30e-81 | 253 |
| MsG0780036698.01.T01 | MTR_8g041270 | 45.833 | 360 | 160 | 12 | 12 | 349 | 9 | 355 | 2.96e-81 | 253 |
| MsG0780036698.01.T01 | MTR_0129s0120 | 43.785 | 354 | 181 | 9 | 3 | 349 | 2 | 344 | 3.76e-81 | 253 |
| MsG0780036698.01.T01 | MTR_6g461660 | 43.978 | 357 | 171 | 9 | 4 | 346 | 5 | 346 | 4.65e-81 | 253 |
| MsG0780036698.01.T01 | MTR_0054s0100 | 44.231 | 364 | 177 | 9 | 5 | 351 | 4 | 358 | 6.04e-81 | 253 |
| MsG0780036698.01.T01 | MTR_5g037680 | 42.697 | 356 | 165 | 9 | 11 | 351 | 1 | 332 | 1.23e-80 | 253 |
| MsG0780036698.01.T01 | MTR_0054s0090 | 44.110 | 365 | 176 | 9 | 4 | 351 | 3 | 356 | 1.55e-80 | 251 |
| MsG0780036698.01.T01 | MTR_0129s0050 | 47.312 | 372 | 155 | 17 | 3 | 349 | 1 | 356 | 1.74e-79 | 249 |
| MsG0780036698.01.T01 | MTR_8g013000 | 45.170 | 352 | 171 | 10 | 10 | 349 | 2 | 343 | 6.50e-79 | 248 |
| MsG0780036698.01.T01 | MTR_4g028660 | 45.330 | 364 | 166 | 15 | 5 | 351 | 2 | 349 | 1.16e-77 | 244 |
| MsG0780036698.01.T01 | MTR_4g027450 | 45.330 | 364 | 166 | 15 | 5 | 351 | 2 | 349 | 1.16e-77 | 244 |
| MsG0780036698.01.T01 | MTR_6g079770 | 43.700 | 373 | 177 | 15 | 4 | 351 | 3 | 367 | 2.44e-76 | 241 |
| MsG0780036698.01.T01 | MTR_5g097350 | 44.638 | 345 | 159 | 8 | 3 | 336 | 1 | 324 | 2.96e-76 | 240 |
| MsG0780036698.01.T01 | MTR_7g069550 | 41.714 | 350 | 177 | 8 | 3 | 338 | 1 | 337 | 4.14e-76 | 240 |
| MsG0780036698.01.T01 | MTR_6g080680 | 42.857 | 371 | 166 | 12 | 1 | 351 | 1 | 345 | 7.53e-76 | 239 |
| MsG0780036698.01.T01 | MTR_4g102410 | 42.265 | 362 | 192 | 9 | 2 | 351 | 43 | 399 | 2.55e-75 | 239 |
| MsG0780036698.01.T01 | MTR_5g097220 | 41.755 | 376 | 172 | 12 | 3 | 351 | 1 | 356 | 3.95e-75 | 238 |
| MsG0780036698.01.T01 | MTR_4g028680 | 45.330 | 364 | 167 | 15 | 5 | 351 | 2 | 350 | 5.30e-75 | 237 |
| MsG0780036698.01.T01 | MTR_5g069390 | 40.157 | 381 | 182 | 11 | 3 | 351 | 1 | 367 | 6.15e-75 | 240 |
| MsG0780036698.01.T01 | MTR_0134s0060 | 43.750 | 368 | 168 | 12 | 12 | 351 | 6 | 362 | 2.33e-74 | 236 |
| MsG0780036698.01.T01 | MTR_5g096910 | 41.292 | 356 | 177 | 10 | 8 | 351 | 7 | 342 | 6.77e-74 | 234 |
| MsG0780036698.01.T01 | MTR_4g028750 | 44.077 | 363 | 171 | 13 | 5 | 351 | 2 | 348 | 1.75e-73 | 233 |
| MsG0780036698.01.T01 | MTR_1g007450 | 43.855 | 358 | 172 | 13 | 7 | 349 | 1 | 344 | 2.23e-73 | 233 |
| MsG0780036698.01.T01 | MTR_2g021770 | 39.496 | 357 | 190 | 9 | 12 | 349 | 6 | 355 | 2.68e-73 | 233 |
| MsG0780036698.01.T01 | MTR_6g090180 | 42.216 | 379 | 170 | 12 | 1 | 351 | 31 | 388 | 2.93e-73 | 234 |
| MsG0780036698.01.T01 | MTR_4g130330 | 44.789 | 355 | 154 | 14 | 18 | 351 | 7 | 340 | 4.07e-73 | 232 |
| MsG0780036698.01.T01 | MTR_8g039500 | 40.730 | 356 | 171 | 13 | 7 | 351 | 1 | 327 | 1.11e-72 | 229 |
| MsG0780036698.01.T01 | MTR_3g011120 | 41.076 | 353 | 177 | 11 | 3 | 351 | 5 | 330 | 4.91e-72 | 228 |
| MsG0780036698.01.T01 | MTR_2g064950 | 42.135 | 356 | 169 | 10 | 11 | 349 | 3 | 338 | 1.38e-71 | 228 |
| MsG0780036698.01.T01 | MTR_8g046310 | 40.884 | 362 | 167 | 12 | 3 | 351 | 1 | 328 | 2.74e-71 | 227 |
| MsG0780036698.01.T01 | MTR_7g079640 | 41.690 | 355 | 167 | 9 | 3 | 349 | 1 | 323 | 3.10e-71 | 227 |
| MsG0780036698.01.T01 | MTR_5g059430 | 39.535 | 387 | 184 | 12 | 3 | 351 | 1 | 375 | 4.45e-71 | 228 |
| MsG0780036698.01.T01 | MTR_5g072060 | 44.214 | 337 | 143 | 10 | 16 | 338 | 4 | 309 | 1.74e-70 | 231 |
| MsG0780036698.01.T01 | MTR_1g007410 | 42.458 | 358 | 184 | 11 | 2 | 348 | 6 | 352 | 3.49e-70 | 224 |
| MsG0780036698.01.T01 | MTR_5g096630 | 43.064 | 346 | 185 | 6 | 1 | 338 | 1 | 342 | 5.14e-70 | 224 |
| MsG0780036698.01.T01 | MTR_4g117550 | 40.960 | 354 | 171 | 10 | 3 | 350 | 1 | 322 | 1.59e-69 | 222 |
| MsG0780036698.01.T01 | MTR_8g464770 | 41.210 | 347 | 185 | 7 | 7 | 351 | 1 | 330 | 3.47e-69 | 221 |
| MsG0780036698.01.T01 | MTR_2g104280 | 42.105 | 361 | 170 | 13 | 13 | 349 | 9 | 354 | 1.10e-68 | 221 |
| MsG0780036698.01.T01 | MTR_8g467670 | 41.765 | 340 | 168 | 9 | 18 | 351 | 14 | 329 | 1.47e-68 | 220 |
| MsG0780036698.01.T01 | MTR_6g079810 | 41.600 | 375 | 180 | 15 | 1 | 351 | 54 | 413 | 3.70e-68 | 221 |
| MsG0780036698.01.T01 | MTR_6g478230 | 39.674 | 368 | 173 | 11 | 7 | 351 | 16 | 357 | 8.12e-68 | 219 |
| MsG0780036698.01.T01 | MTR_1g053510 | 38.211 | 369 | 191 | 9 | 6 | 351 | 2 | 356 | 1.01e-67 | 218 |
| MsG0780036698.01.T01 | MTR_1g007430 | 43.119 | 327 | 161 | 10 | 29 | 349 | 7 | 314 | 1.55e-67 | 216 |
| MsG0780036698.01.T01 | MTR_2g065860 | 39.167 | 360 | 182 | 9 | 7 | 351 | 1 | 338 | 1.87e-67 | 217 |
| MsG0780036698.01.T01 | MTR_2g066170 | 39.326 | 356 | 185 | 15 | 7 | 351 | 1 | 336 | 4.04e-67 | 216 |
| MsG0780036698.01.T01 | MTR_7g111700 | 40.947 | 359 | 155 | 10 | 3 | 349 | 1 | 314 | 1.29e-66 | 214 |
| MsG0780036698.01.T01 | MTR_4g014370 | 38.830 | 376 | 175 | 11 | 9 | 349 | 2 | 357 | 7.49e-66 | 214 |
| MsG0780036698.01.T01 | MTR_2g034700 | 41.813 | 342 | 160 | 9 | 18 | 351 | 14 | 324 | 2.79e-65 | 211 |
| MsG0780036698.01.T01 | MTR_6g090250 | 41.379 | 348 | 166 | 10 | 38 | 351 | 31 | 374 | 4.40e-65 | 212 |
| MsG0780036698.01.T01 | MTR_8g033140 | 38.798 | 366 | 179 | 10 | 12 | 346 | 11 | 362 | 1.29e-64 | 211 |
| MsG0780036698.01.T01 | MTR_5g024260 | 37.669 | 369 | 190 | 9 | 1 | 349 | 5 | 353 | 5.44e-64 | 209 |
| MsG0780036698.01.T01 | MTR_2g066200 | 38.375 | 357 | 189 | 12 | 7 | 351 | 1 | 338 | 2.85e-63 | 206 |
| MsG0780036698.01.T01 | MTR_5g074800 | 41.695 | 295 | 146 | 8 | 57 | 338 | 1 | 282 | 4.62e-63 | 204 |
| MsG0780036698.01.T01 | MTR_5g074850 | 41.033 | 368 | 167 | 16 | 1 | 341 | 18 | 362 | 1.32e-62 | 215 |
| MsG0780036698.01.T01 | MTR_5g091140 | 40.669 | 359 | 177 | 10 | 1 | 349 | 31 | 363 | 5.46e-62 | 204 |
| MsG0780036698.01.T01 | MTR_2g065840 | 37.950 | 361 | 184 | 10 | 7 | 351 | 1 | 337 | 2.08e-61 | 201 |
| MsG0780036698.01.T01 | MTR_8g046200 | 37.975 | 395 | 169 | 17 | 8 | 351 | 3 | 372 | 2.55e-61 | 202 |
| MsG0780036698.01.T01 | MTR_8g046220 | 38.108 | 370 | 163 | 13 | 18 | 351 | 17 | 356 | 5.09e-61 | 201 |
| MsG0780036698.01.T01 | MTR_5g092850 | 40.115 | 349 | 174 | 12 | 18 | 349 | 16 | 346 | 1.42e-60 | 200 |
| MsG0780036698.01.T01 | MTR_8g064890 | 39.296 | 341 | 182 | 10 | 18 | 351 | 16 | 338 | 1.55e-60 | 199 |
| MsG0780036698.01.T01 | MTR_7g104710 | 41.562 | 320 | 135 | 12 | 1 | 309 | 1 | 279 | 2.22e-59 | 194 |
| MsG0780036698.01.T01 | MTR_0831s0010 | 38.348 | 339 | 181 | 9 | 16 | 346 | 48 | 366 | 4.21e-59 | 196 |
| MsG0780036698.01.T01 | MTR_5g075370 | 40.000 | 350 | 165 | 15 | 18 | 341 | 8 | 338 | 1.57e-58 | 202 |
| MsG0780036698.01.T01 | MTR_5g096900 | 42.857 | 336 | 139 | 15 | 13 | 324 | 7 | 313 | 2.21e-58 | 192 |
| MsG0780036698.01.T01 | MTR_5g064700 | 39.683 | 315 | 160 | 9 | 57 | 343 | 1 | 313 | 3.01e-58 | 193 |
| MsG0780036698.01.T01 | MTR_5g097820 | 41.636 | 269 | 131 | 8 | 13 | 270 | 16 | 269 | 3.33e-57 | 187 |
| MsG0780036698.01.T01 | MTR_2g066150 | 37.249 | 349 | 175 | 12 | 7 | 351 | 1 | 309 | 6.67e-57 | 189 |
| MsG0780036698.01.T01 | MTR_8g018110 | 37.151 | 358 | 177 | 14 | 18 | 351 | 14 | 347 | 1.98e-56 | 189 |
| MsG0780036698.01.T01 | MTR_8g033110 | 38.028 | 355 | 175 | 12 | 18 | 341 | 14 | 354 | 3.91e-55 | 186 |
| MsG0780036698.01.T01 | MTR_5g092860 | 38.682 | 349 | 148 | 12 | 31 | 351 | 13 | 323 | 4.48e-55 | 184 |
| MsG0780036698.01.T01 | MTR_8g063330 | 36.390 | 349 | 188 | 9 | 18 | 351 | 14 | 343 | 6.71e-55 | 187 |
| MsG0780036698.01.T01 | MTR_8g063370 | 34.203 | 345 | 191 | 12 | 16 | 351 | 22 | 339 | 1.39e-54 | 184 |
| MsG0780036698.01.T01 | MTR_5g094350 | 40.625 | 288 | 129 | 9 | 18 | 287 | 13 | 276 | 1.62e-54 | 180 |
| MsG0780036698.01.T01 | MTR_8g036970 | 36.905 | 336 | 142 | 8 | 22 | 351 | 2 | 273 | 4.66e-54 | 182 |
| MsG0780036698.01.T01 | MTR_8g032980 | 36.573 | 391 | 178 | 12 | 8 | 351 | 4 | 371 | 7.01e-54 | 183 |
| MsG0780036698.01.T01 | MTR_5g022850 | 36.512 | 367 | 148 | 10 | 3 | 350 | 1 | 301 | 7.70e-54 | 181 |
| MsG0780036698.01.T01 | MTR_6g078010 | 39.117 | 317 | 141 | 14 | 55 | 351 | 1 | 285 | 2.41e-52 | 177 |
| MsG0780036698.01.T01 | MTR_1g076810 | 46.531 | 245 | 114 | 8 | 1 | 240 | 1 | 233 | 1.02e-51 | 182 |
| MsG0780036698.01.T01 | MTR_4g007940 | 36.093 | 302 | 162 | 8 | 68 | 351 | 4 | 292 | 8.42e-51 | 172 |
| MsG0780036698.01.T01 | MTR_8g033090 | 35.171 | 381 | 192 | 13 | 7 | 351 | 1 | 362 | 4.53e-50 | 172 |
| MsG0780036698.01.T01 | MTR_1g098180 | 36.637 | 333 | 163 | 8 | 10 | 340 | 9 | 295 | 6.85e-50 | 171 |
| MsG0780036698.01.T01 | MTR_5g086590 | 43.721 | 215 | 103 | 5 | 139 | 351 | 11 | 209 | 8.07e-50 | 167 |
| MsG0780036698.01.T01 | MTR_7g017150 | 59.155 | 142 | 55 | 2 | 208 | 348 | 74 | 213 | 1.49e-49 | 167 |
| MsG0780036698.01.T01 | MTR_2g104260 | 42.955 | 291 | 135 | 11 | 3 | 277 | 1 | 276 | 3.05e-49 | 167 |
| MsG0780036698.01.T01 | MTR_6g070880 | 41.434 | 251 | 122 | 9 | 1 | 234 | 15 | 257 | 7.44e-49 | 165 |
| MsG0780036698.01.T01 | MTR_6g071420 | 41.434 | 251 | 122 | 9 | 1 | 234 | 15 | 257 | 7.44e-49 | 165 |
| MsG0780036698.01.T01 | MTR_7g017120 | 57.746 | 142 | 57 | 2 | 208 | 348 | 73 | 212 | 1.02e-48 | 165 |
| MsG0780036698.01.T01 | MTR_8g063310 | 35.278 | 360 | 189 | 16 | 9 | 351 | 13 | 345 | 1.97e-48 | 168 |
| MsG0780036698.01.T01 | MTR_8g064790 | 35.608 | 337 | 146 | 11 | 18 | 349 | 15 | 285 | 1.43e-47 | 164 |
| MsG0780036698.01.T01 | MTR_6g079790 | 40.755 | 265 | 134 | 9 | 103 | 351 | 2 | 259 | 1.80e-47 | 163 |
| MsG0780036698.01.T01 | MTR_5g076490 | 36.964 | 303 | 154 | 12 | 55 | 344 | 1 | 279 | 1.27e-45 | 159 |
| MsG0780036698.01.T01 | MTR_6g087620 | 37.363 | 273 | 124 | 8 | 91 | 351 | 1 | 238 | 2.15e-43 | 151 |
| MsG0780036698.01.T01 | MTR_5g068490 | 38.340 | 253 | 124 | 9 | 100 | 351 | 8 | 229 | 1.48e-42 | 149 |
| MsG0780036698.01.T01 | MTR_7g023800 | 38.538 | 301 | 139 | 10 | 57 | 351 | 1 | 261 | 1.23e-41 | 147 |
| MsG0780036698.01.T01 | MTR_5g043605 | 39.600 | 250 | 121 | 11 | 101 | 342 | 54 | 281 | 8.14e-40 | 144 |
| MsG0780036698.01.T01 | MTR_4g016000 | 41.748 | 206 | 103 | 7 | 146 | 351 | 2 | 190 | 1.30e-39 | 140 |
| MsG0780036698.01.T01 | MTR_4g014370 | 33.148 | 359 | 151 | 14 | 1 | 349 | 6 | 285 | 2.39e-38 | 140 |
| MsG0780036698.01.T01 | MTR_1g050308 | 39.662 | 237 | 112 | 9 | 2 | 229 | 18 | 232 | 3.96e-38 | 139 |
| MsG0780036698.01.T01 | MTR_8g033000 | 33.731 | 335 | 162 | 10 | 55 | 351 | 1 | 313 | 1.11e-37 | 139 |
| MsG0780036698.01.T01 | MTR_6g465360 | 40.496 | 242 | 115 | 11 | 4 | 224 | 48 | 281 | 1.15e-37 | 137 |
| MsG0780036698.01.T01 | MTR_1g115205 | 36.296 | 270 | 101 | 10 | 2 | 250 | 16 | 235 | 1.18e-37 | 135 |
| MsG0780036698.01.T01 | MTR_8g063350 | 30.636 | 346 | 162 | 12 | 18 | 351 | 14 | 293 | 5.91e-37 | 136 |
| MsG0780036698.01.T01 | MTR_2g021920 | 44.503 | 191 | 88 | 7 | 173 | 349 | 37 | 223 | 5.16e-35 | 129 |
| MsG0780036698.01.T01 | MTR_5g097650 | 46.203 | 158 | 71 | 4 | 8 | 165 | 13 | 156 | 5.29e-35 | 125 |
| MsG0780036698.01.T01 | MTR_1g050312 | 36.398 | 261 | 122 | 12 | 91 | 346 | 16 | 237 | 1.35e-34 | 129 |
| MsG0780036698.01.T01 | MTR_8g073570 | 43.529 | 170 | 90 | 4 | 15 | 184 | 7 | 170 | 3.61e-34 | 124 |
| MsG0780036698.01.T01 | MTR_5g098950 | 39.623 | 212 | 90 | 5 | 143 | 351 | 90 | 266 | 2.56e-33 | 125 |
| MsG0780036698.01.T01 | MTR_3g018750 | 40.659 | 182 | 88 | 6 | 173 | 341 | 3 | 177 | 5.61e-33 | 123 |
| MsG0780036698.01.T01 | MTR_6g004450 | 40.642 | 187 | 103 | 4 | 165 | 351 | 41 | 219 | 1.16e-32 | 123 |
| MsG0780036698.01.T01 | MTR_6g090260 | 50.714 | 140 | 63 | 4 | 216 | 351 | 75 | 212 | 1.37e-32 | 122 |
| MsG0780036698.01.T01 | MTR_6g090260 | 55.072 | 69 | 27 | 2 | 3 | 67 | 1 | 69 | 8.51e-13 | 68.2 |
| MsG0780036698.01.T01 | MTR_6g009350 | 38.947 | 190 | 96 | 5 | 170 | 351 | 5 | 182 | 1.86e-30 | 115 |
| MsG0780036698.01.T01 | MTR_5g023970 | 42.143 | 140 | 74 | 2 | 215 | 351 | 10 | 145 | 5.14e-28 | 108 |
| MsG0780036698.01.T01 | MTR_3g019290 | 35.484 | 217 | 98 | 6 | 7 | 221 | 1 | 177 | 5.22e-28 | 108 |
| MsG0780036698.01.T01 | MTR_8g035690 | 34.649 | 228 | 109 | 9 | 152 | 351 | 38 | 253 | 1.18e-26 | 107 |
| MsG0780036698.01.T01 | MTR_5g097850 | 43.972 | 141 | 62 | 5 | 221 | 351 | 63 | 196 | 1.70e-25 | 103 |
| MsG0780036698.01.T01 | MTR_5g096070 | 42.667 | 150 | 51 | 4 | 12 | 158 | 20 | 137 | 1.63e-24 | 98.2 |
| MsG0780036698.01.T01 | MTR_7g101200 | 35.149 | 202 | 96 | 7 | 140 | 334 | 37 | 210 | 3.22e-24 | 99.8 |
| MsG0780036698.01.T01 | MTR_7g070440 | 28.024 | 339 | 178 | 12 | 18 | 333 | 7 | 302 | 5.70e-23 | 99.0 |
| MsG0780036698.01.T01 | MTR_5g049560 | 38.095 | 147 | 78 | 3 | 55 | 188 | 1 | 147 | 6.71e-23 | 96.7 |
| MsG0780036698.01.T01 | MTR_5g091150 | 31.441 | 229 | 87 | 8 | 103 | 307 | 2 | 184 | 3.12e-22 | 93.2 |
| MsG0780036698.01.T01 | MTR_5g097540 | 37.857 | 140 | 78 | 3 | 213 | 351 | 94 | 225 | 4.43e-22 | 95.1 |
| MsG0780036698.01.T01 | MTR_4g021785 | 28.704 | 324 | 177 | 12 | 21 | 338 | 12 | 287 | 5.60e-21 | 92.8 |
| MsG0780036698.01.T01 | MTR_3g013740 | 27.920 | 351 | 199 | 14 | 7 | 340 | 33 | 346 | 7.08e-21 | 93.2 |
| MsG0780036698.01.T01 | MTR_5g066420 | 45.455 | 110 | 58 | 1 | 244 | 351 | 1 | 110 | 7.69e-21 | 88.2 |
| MsG0780036698.01.T01 | MTR_2g029990 | 29.846 | 325 | 179 | 17 | 21 | 336 | 54 | 338 | 1.52e-19 | 89.4 |
| MsG0780036698.01.T01 | MTR_8g041440 | 39.394 | 132 | 51 | 4 | 3 | 125 | 1 | 112 | 1.91e-19 | 83.2 |
| MsG0780036698.01.T01 | MTR_7g019250 | 30.882 | 204 | 111 | 5 | 155 | 351 | 206 | 386 | 3.02e-19 | 89.0 |
| MsG0780036698.01.T01 | MTR_3g007410 | 29.586 | 338 | 162 | 18 | 21 | 336 | 55 | 338 | 5.32e-19 | 87.8 |
| MsG0780036698.01.T01 | MTR_5g096920 | 46.392 | 97 | 45 | 2 | 244 | 340 | 1 | 90 | 5.76e-19 | 82.8 |
| MsG0780036698.01.T01 | MTR_3g007360 | 29.167 | 336 | 166 | 17 | 21 | 336 | 55 | 338 | 1.52e-18 | 86.7 |
| MsG0780036698.01.T01 | MTR_4g023080 | 26.316 | 323 | 174 | 11 | 21 | 332 | 12 | 281 | 3.04e-18 | 85.1 |
| MsG0780036698.01.T01 | MTR_4g023070 | 27.795 | 331 | 196 | 16 | 17 | 342 | 2 | 294 | 1.28e-17 | 83.6 |
| MsG0780036698.01.T01 | MTR_4g117780 | 28.173 | 323 | 185 | 12 | 17 | 332 | 10 | 292 | 2.48e-17 | 82.4 |
| MsG0780036698.01.T01 | MTR_3g014540 | 27.439 | 328 | 188 | 15 | 18 | 336 | 29 | 315 | 3.53e-17 | 82.4 |
| MsG0780036698.01.T01 | MTR_0044s0300 | 30.408 | 319 | 175 | 16 | 21 | 334 | 41 | 317 | 3.84e-17 | 82.4 |
| MsG0780036698.01.T01 | MTR_4g023090 | 25.893 | 336 | 205 | 11 | 3 | 332 | 1 | 298 | 1.51e-16 | 80.5 |
| MsG0780036698.01.T01 | MTR_6g079730 | 49.412 | 85 | 42 | 1 | 266 | 349 | 14 | 98 | 3.16e-16 | 75.5 |
| MsG0780036698.01.T01 | MTR_8g101580 | 25.749 | 334 | 183 | 14 | 22 | 341 | 50 | 332 | 3.53e-16 | 79.3 |
| MsG0780036698.01.T01 | MTR_3g034130 | 26.074 | 326 | 191 | 14 | 21 | 332 | 12 | 301 | 3.91e-16 | 79.0 |
| MsG0780036698.01.T01 | MTR_4g116330 | 27.089 | 347 | 198 | 15 | 2 | 338 | 7 | 308 | 4.88e-16 | 79.0 |
| MsG0780036698.01.T01 | MTR_3g009310 | 27.950 | 322 | 186 | 14 | 21 | 336 | 45 | 326 | 5.31e-16 | 79.0 |
| MsG0780036698.01.T01 | MTR_2g024110 | 22.917 | 336 | 194 | 12 | 17 | 334 | 3 | 291 | 6.87e-16 | 78.6 |
| MsG0780036698.01.T01 | MTR_3g014570 | 26.727 | 333 | 178 | 15 | 21 | 336 | 32 | 315 | 1.04e-15 | 77.8 |
| MsG0780036698.01.T01 | MTR_4g094400 | 42.718 | 103 | 46 | 3 | 244 | 334 | 10 | 111 | 1.21e-15 | 73.2 |
| MsG0780036698.01.T01 | MTR_2g025960 | 26.168 | 214 | 125 | 9 | 140 | 341 | 27 | 219 | 1.35e-15 | 77.0 |
| MsG0780036698.01.T01 | MTR_5g096050 | 40.909 | 110 | 57 | 2 | 244 | 345 | 1 | 110 | 1.73e-15 | 72.4 |
| MsG0780036698.01.T01 | MTR_4g023130 | 25.279 | 269 | 159 | 9 | 73 | 332 | 5 | 240 | 1.93e-15 | 76.6 |
| MsG0780036698.01.T01 | MTR_1g097560 | 27.439 | 328 | 177 | 12 | 20 | 339 | 38 | 312 | 2.21e-15 | 77.0 |
| MsG0780036698.01.T01 | MTR_4g055060 | 27.744 | 328 | 182 | 16 | 21 | 334 | 33 | 319 | 2.55e-15 | 76.6 |
| MsG0780036698.01.T01 | MTR_0115s0020 | 27.353 | 340 | 207 | 13 | 17 | 338 | 9 | 326 | 2.61e-15 | 77.0 |
| MsG0780036698.01.T01 | MTR_2g031720 | 24.012 | 329 | 195 | 13 | 21 | 334 | 9 | 297 | 2.72e-15 | 76.6 |
| MsG0780036698.01.T01 | MTR_5g046300 | 26.332 | 319 | 190 | 11 | 21 | 336 | 7 | 283 | 3.82e-15 | 75.9 |
| MsG0780036698.01.T01 | MTR_5g046290 | 26.332 | 319 | 190 | 11 | 21 | 336 | 7 | 283 | 3.82e-15 | 75.9 |
| MsG0780036698.01.T01 | MTR_3g047580 | 32.394 | 142 | 68 | 3 | 16 | 155 | 12 | 127 | 4.28e-15 | 71.6 |
| MsG0780036698.01.T01 | MTR_5g086780 | 65.574 | 61 | 19 | 1 | 3 | 61 | 1 | 61 | 4.72e-15 | 73.9 |
| MsG0780036698.01.T01 | MTR_3g006670 | 26.901 | 342 | 191 | 15 | 21 | 347 | 52 | 349 | 5.38e-15 | 75.9 |
| MsG0780036698.01.T01 | MTR_5g057710 | 26.300 | 327 | 193 | 12 | 21 | 340 | 49 | 334 | 6.59e-15 | 75.5 |
| MsG0780036698.01.T01 | MTR_8g013010 | 27.181 | 298 | 168 | 11 | 21 | 310 | 57 | 313 | 1.18e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_6g016285 | 27.729 | 339 | 196 | 14 | 18 | 334 | 21 | 332 | 1.26e-14 | 75.1 |
| MsG0780036698.01.T01 | MTR_2g021150 | 28.107 | 338 | 199 | 15 | 20 | 349 | 16 | 317 | 1.26e-14 | 74.7 |
| MsG0780036698.01.T01 | MTR_3g036335 | 28.173 | 323 | 181 | 14 | 21 | 334 | 44 | 324 | 1.57e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_3g103020 | 27.301 | 326 | 189 | 13 | 21 | 338 | 23 | 308 | 1.79e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_4g117850 | 27.844 | 334 | 175 | 16 | 21 | 338 | 26 | 309 | 1.87e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_5g027330 | 22.647 | 340 | 205 | 12 | 17 | 334 | 39 | 342 | 1.90e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_1g050542 | 26.708 | 322 | 185 | 15 | 20 | 336 | 60 | 335 | 1.91e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_3g083010 | 23.837 | 344 | 203 | 12 | 21 | 336 | 9 | 321 | 2.08e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_3g030330 | 29.448 | 326 | 168 | 17 | 21 | 336 | 23 | 296 | 2.68e-14 | 73.6 |
| MsG0780036698.01.T01 | MTR_5g027370 | 22.647 | 340 | 205 | 12 | 17 | 334 | 28 | 331 | 2.73e-14 | 73.9 |
| MsG0780036698.01.T01 | MTR_2g046900 | 26.506 | 332 | 187 | 13 | 20 | 336 | 30 | 319 | 2.89e-14 | 73.6 |
| MsG0780036698.01.T01 | MTR_5g070080 | 26.741 | 359 | 202 | 17 | 21 | 350 | 13 | 339 | 2.93e-14 | 73.6 |
| MsG0780036698.01.T01 | MTR_2g021155 | 29.102 | 323 | 178 | 16 | 21 | 334 | 39 | 319 | 3.00e-14 | 74.3 |
| MsG0780036698.01.T01 | MTR_2g046920 | 26.380 | 326 | 187 | 15 | 20 | 336 | 26 | 307 | 3.87e-14 | 73.2 |
| MsG0780036698.01.T01 | MTR_4g031770 | 27.103 | 321 | 185 | 15 | 21 | 333 | 7 | 286 | 3.89e-14 | 73.2 |
| MsG0780036698.01.T01 | MTR_3g009260 | 27.103 | 321 | 183 | 15 | 21 | 336 | 44 | 318 | 3.92e-14 | 73.2 |
| MsG0780036698.01.T01 | MTR_2g028160 | 25.513 | 341 | 202 | 17 | 17 | 334 | 4 | 315 | 4.15e-14 | 73.2 |
| MsG0780036698.01.T01 | MTR_3g007330 | 26.462 | 325 | 182 | 15 | 21 | 336 | 51 | 327 | 5.11e-14 | 72.8 |
| MsG0780036698.01.T01 | MTR_1g054575 | 28.902 | 346 | 172 | 20 | 20 | 343 | 54 | 347 | 5.68e-14 | 73.6 |
| MsG0780036698.01.T01 | MTR_1g068835 | 23.145 | 337 | 192 | 15 | 16 | 334 | 2 | 289 | 6.16e-14 | 72.8 |
| MsG0780036698.01.T01 | MTR_0760s0010 | 27.247 | 356 | 184 | 14 | 3 | 336 | 20 | 322 | 6.18e-14 | 72.8 |
| MsG0780036698.01.T01 | MTR_3g036290 | 26.586 | 331 | 188 | 16 | 21 | 347 | 25 | 304 | 8.64e-14 | 72.0 |
| MsG0780036698.01.T01 | MTR_5g097660 | 51.515 | 66 | 32 | 0 | 286 | 351 | 4 | 69 | 1.09e-13 | 67.4 |
| MsG0780036698.01.T01 | MTR_1g068860 | 23.214 | 336 | 193 | 12 | 17 | 334 | 3 | 291 | 1.20e-13 | 71.6 |
| MsG0780036698.01.T01 | MTR_3g030620 | 41.593 | 113 | 58 | 3 | 244 | 351 | 23 | 132 | 1.35e-13 | 68.9 |
| MsG0780036698.01.T01 | MTR_7g017160 | 75.000 | 40 | 10 | 0 | 161 | 200 | 20 | 59 | 1.39e-13 | 65.9 |
| MsG0780036698.01.T01 | MTR_1g094210 | 25.223 | 337 | 173 | 15 | 18 | 336 | 57 | 332 | 2.52e-13 | 70.9 |
| MsG0780036698.01.T01 | MTR_4g117770 | 25.857 | 321 | 193 | 11 | 18 | 332 | 11 | 292 | 2.97e-13 | 70.5 |
| MsG0780036698.01.T01 | MTR_4g117810 | 25.857 | 321 | 193 | 11 | 18 | 332 | 11 | 292 | 2.97e-13 | 70.5 |
| MsG0780036698.01.T01 | MTR_1g094210 | 25.373 | 335 | 171 | 15 | 20 | 336 | 59 | 332 | 3.00e-13 | 70.5 |
| MsG0780036698.01.T01 | MTR_5g094360 | 41.379 | 87 | 47 | 3 | 151 | 235 | 40 | 124 | 3.77e-13 | 67.0 |
| MsG0780036698.01.T01 | MTR_3g058470 | 27.074 | 229 | 129 | 8 | 17 | 234 | 36 | 237 | 5.74e-13 | 69.7 |
| MsG0780036698.01.T01 | MTR_2g021190 | 28.528 | 326 | 182 | 18 | 21 | 336 | 24 | 308 | 5.99e-13 | 69.7 |
| MsG0780036698.01.T01 | MTR_4g023440 | 27.459 | 244 | 124 | 10 | 21 | 252 | 21 | 223 | 6.06e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_3g436150 | 26.300 | 327 | 200 | 13 | 21 | 336 | 35 | 331 | 7.19e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_4g109280 | 28.354 | 328 | 172 | 14 | 21 | 336 | 11 | 287 | 7.72e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_3g030310 | 25.460 | 326 | 194 | 13 | 21 | 336 | 24 | 310 | 8.03e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_2g426060 | 24.359 | 312 | 177 | 13 | 21 | 307 | 9 | 286 | 8.04e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_3g034160 | 25.449 | 334 | 201 | 13 | 12 | 332 | 3 | 301 | 8.56e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_7g066100 | 25.203 | 369 | 198 | 15 | 18 | 349 | 11 | 338 | 9.11e-13 | 69.3 |
| MsG0780036698.01.T01 | MTR_2g031640 | 22.796 | 329 | 195 | 12 | 21 | 334 | 9 | 293 | 1.24e-12 | 68.6 |
| MsG0780036698.01.T01 | MTR_2g046830 | 25.926 | 324 | 191 | 13 | 20 | 336 | 27 | 308 | 1.53e-12 | 68.6 |
| MsG0780036698.01.T01 | MTR_8g467140 | 26.606 | 327 | 192 | 14 | 20 | 339 | 34 | 319 | 1.59e-12 | 68.2 |
| MsG0780036698.01.T01 | MTR_0627s0010 | 25.294 | 340 | 208 | 16 | 22 | 336 | 42 | 360 | 1.93e-12 | 68.2 |
| MsG0780036698.01.T01 | MTR_3g058480 | 26.087 | 253 | 142 | 10 | 17 | 254 | 38 | 260 | 1.97e-12 | 67.8 |
| MsG0780036698.01.T01 | MTR_2g028110 | 23.494 | 332 | 201 | 14 | 17 | 334 | 3 | 295 | 2.69e-12 | 67.8 |
| MsG0780036698.01.T01 | MTR_3g024040 | 27.937 | 315 | 174 | 15 | 26 | 336 | 39 | 304 | 3.54e-12 | 67.4 |
| MsG0780036698.01.T01 | MTR_5g070088 | 26.586 | 331 | 194 | 13 | 21 | 332 | 10 | 310 | 4.09e-12 | 67.0 |
| MsG0780036698.01.T01 | MTR_3g030250 | 26.006 | 323 | 180 | 14 | 21 | 336 | 40 | 310 | 4.46e-12 | 67.0 |
| MsG0780036698.01.T01 | MTR_2g425980 | 23.009 | 339 | 214 | 12 | 14 | 334 | 1 | 310 | 4.48e-12 | 67.0 |
| MsG0780036698.01.T01 | MTR_7g017270 | 62.264 | 53 | 20 | 0 | 276 | 328 | 29 | 81 | 4.79e-12 | 62.0 |
| MsG0780036698.01.T01 | MTR_2g021860 | 31.250 | 112 | 77 | 0 | 101 | 212 | 13 | 124 | 6.53e-12 | 63.2 |
| MsG0780036698.01.T01 | MTR_4g117720 | 29.146 | 199 | 114 | 8 | 139 | 332 | 121 | 297 | 7.11e-12 | 66.2 |
| MsG0780036698.01.T01 | MTR_2g021050 | 22.254 | 346 | 202 | 13 | 17 | 348 | 4 | 296 | 7.80e-12 | 66.2 |
| MsG0780036698.01.T01 | MTR_3g024150 | 28.267 | 329 | 173 | 14 | 21 | 336 | 38 | 316 | 7.95e-12 | 66.2 |
| MsG0780036698.01.T01 | MTR_1g097490 | 26.625 | 323 | 185 | 17 | 21 | 336 | 52 | 329 | 8.55e-12 | 66.2 |
| MsG0780036698.01.T01 | MTR_6g053240 | 25.758 | 330 | 199 | 10 | 17 | 336 | 27 | 320 | 1.10e-11 | 65.9 |
| MsG0780036698.01.T01 | MTR_5g007610 | 25.526 | 333 | 191 | 14 | 21 | 336 | 44 | 336 | 1.12e-11 | 65.9 |
| MsG0780036698.01.T01 | MTR_1g088120 | 24.928 | 349 | 189 | 13 | 20 | 333 | 12 | 322 | 1.66e-11 | 65.5 |
| MsG0780036698.01.T01 | MTR_3g009240 | 27.103 | 321 | 186 | 15 | 21 | 336 | 39 | 316 | 1.67e-11 | 65.5 |
| MsG0780036698.01.T01 | MTR_2g426090 | 23.353 | 334 | 202 | 14 | 21 | 334 | 9 | 308 | 1.80e-11 | 65.5 |
| MsG0780036698.01.T01 | MTR_2g055970 | 25.145 | 346 | 210 | 14 | 1 | 339 | 195 | 498 | 2.09e-11 | 65.5 |
| MsG0780036698.01.T01 | MTR_3g030240 | 26.498 | 317 | 181 | 13 | 21 | 336 | 43 | 308 | 2.14e-11 | 65.1 |
| MsG0780036698.01.T01 | MTR_4g116330 | 25.385 | 260 | 155 | 10 | 2 | 255 | 7 | 233 | 2.73e-11 | 64.3 |
| MsG0780036698.01.T01 | MTR_2g078870 | 25.417 | 240 | 136 | 10 | 101 | 336 | 36 | 236 | 2.78e-11 | 64.3 |
| MsG0780036698.01.T01 | MTR_6g048120 | 25.926 | 324 | 200 | 11 | 21 | 336 | 39 | 330 | 3.03e-11 | 64.7 |
| MsG0780036698.01.T01 | MTR_6g065980 | 25.697 | 323 | 174 | 13 | 21 | 334 | 19 | 284 | 3.07e-11 | 64.3 |
| MsG0780036698.01.T01 | MTR_0064s0160 | 26.027 | 365 | 228 | 17 | 2 | 346 | 26 | 368 | 3.47e-11 | 64.7 |
| MsG0780036698.01.T01 | MTR_1004s0010 | 27.500 | 240 | 128 | 10 | 101 | 336 | 95 | 292 | 3.67e-11 | 64.3 |
| MsG0780036698.01.T01 | MTR_7g062060 | 25.215 | 349 | 203 | 15 | 15 | 333 | 9 | 329 | 3.84e-11 | 64.3 |
| MsG0780036698.01.T01 | MTR_8g073550 | 25.385 | 260 | 143 | 10 | 4 | 244 | 3 | 230 | 4.28e-11 | 62.8 |
| MsG0780036698.01.T01 | MTR_3g024130 | 27.273 | 242 | 141 | 12 | 100 | 336 | 39 | 250 | 4.84e-11 | 63.5 |
| MsG0780036698.01.T01 | MTR_5g070130 | 27.679 | 336 | 191 | 16 | 11 | 332 | 4 | 301 | 4.89e-11 | 63.9 |
| MsG0780036698.01.T01 | MTR_3g047540 | 37.500 | 80 | 42 | 2 | 215 | 292 | 5 | 78 | 5.58e-11 | 58.9 |
| MsG0780036698.01.T01 | MTR_3g010430 | 26.113 | 337 | 171 | 17 | 21 | 334 | 39 | 320 | 6.72e-11 | 63.5 |
| MsG0780036698.01.T01 | MTR_3g010620 | 25.776 | 322 | 178 | 12 | 21 | 336 | 39 | 305 | 7.07e-11 | 63.5 |
| MsG0780036698.01.T01 | MTR_3g030350 | 24.159 | 327 | 189 | 14 | 21 | 336 | 38 | 316 | 8.66e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036698.01.T01 | AT3G06240 | 21.143 | 350 | 210 | 11 | 21 | 335 | 39 | 357 | 1.53e-12 | 68.6 |
| MsG0780036698.01.T01 | AT3G16210 | 26.562 | 320 | 169 | 16 | 20 | 333 | 7 | 266 | 9.96e-12 | 65.9 |
| MsG0780036698.01.T01 | AT4G12560 | 25.816 | 337 | 189 | 16 | 21 | 336 | 7 | 303 | 9.38e-11 | 63.2 |
| MsG0780036698.01.T01 | AT4G12560 | 25.816 | 337 | 189 | 16 | 21 | 336 | 7 | 303 | 9.38e-11 | 63.2 |
| MsG0780036698.01.T01 | AT4G12560 | 25.816 | 337 | 189 | 16 | 21 | 336 | 7 | 303 | 9.38e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGTGTTATATTCTCTTTC+TGG | 0.137602 | 7:+12094532 | MsG0780036698.01.T01:CDS |
| CGAAACATGCTCATGAAATA+AGG | 0.151729 | 7:-12094421 | None:intergenic |
| TCCAACTACCGATGAATTTA+AGG | 0.165873 | 7:+12094705 | MsG0780036698.01.T01:CDS |
| CACAATACAACTCTATTATT+TGG | 0.178672 | 7:-12094679 | None:intergenic |
| GAAGATGGAATTTGCTTAGA+TGG | 0.226287 | 7:+12094982 | MsG0780036698.01.T01:CDS |
| ATGTATCTTATGAACTCTTT+TGG | 0.258660 | 7:+12094893 | MsG0780036698.01.T01:CDS |
| AAAGACTTGGTGGTGTTAAA+TGG | 0.279994 | 7:+12095150 | MsG0780036698.01.T01:CDS |
| GTGAAATCATTGAATCGTTT+TGG | 0.298713 | 7:+12094361 | MsG0780036698.01.T01:CDS |
| GATCCCATCACATCAAATTC+AGG | 0.313284 | 7:-12094613 | None:intergenic |
| TTAGCCTCTTCAAATGGATT+TGG | 0.346655 | 7:-12094589 | None:intergenic |
| GAAATTACTAGACATGGTTT+TGG | 0.350353 | 7:+12094772 | MsG0780036698.01.T01:CDS |
| GAAACATGCTCATGAAATAA+GGG | 0.364883 | 7:-12094420 | None:intergenic |
| TTCTATTGGAGATGAATATA+AGG | 0.365408 | 7:+12094801 | MsG0780036698.01.T01:CDS |
| AGAACGCTCAATGCAGGGTT+GGG | 0.375167 | 7:-12095280 | None:intergenic |
| TATTAACGAGATTCTTTGTC+TGG | 0.378166 | 7:+12094642 | MsG0780036698.01.T01:CDS |
| GAAGACTCGTGAAGGCTAAT+AGG | 0.386012 | 7:-12094733 | None:intergenic |
| CCATCTTCTCTATAATCATA+AGG | 0.394307 | 7:-12094967 | None:intergenic |
| ACCTTAAATTCATCGGTAGT+TGG | 0.410655 | 7:-12094706 | None:intergenic |
| TGACATTGATGATTTATCAT+TGG | 0.414998 | 7:+12094867 | MsG0780036698.01.T01:CDS |
| GGGTATGGGTGTTATCAATA+AGG | 0.422453 | 7:-12095091 | None:intergenic |
| CCCAAAATTGATATATGAAA+AGG | 0.423153 | 7:-12095210 | None:intergenic |
| AACGAGATTCTTTGTCTGGT+TGG | 0.441739 | 7:+12094646 | MsG0780036698.01.T01:CDS |
| TCAGGGTTAGCCTCTTCAAA+TGG | 0.446696 | 7:-12094595 | None:intergenic |
| AAAATAAAACTAAATTAGAT+TGG | 0.453372 | 7:+12094566 | MsG0780036698.01.T01:CDS |
| CAACTTGAAACTGTGACTAT+TGG | 0.457634 | 7:+12094496 | MsG0780036698.01.T01:CDS |
| TTCACGAGTCTTCACGCTAT+GGG | 0.457756 | 7:+12094743 | MsG0780036698.01.T01:CDS |
| AGATGGAGTGTGCCATTGGT+TGG | 0.460600 | 7:+12094999 | MsG0780036698.01.T01:CDS |
| ACTATCACACTCTGAGGGTA+TGG | 0.460746 | 7:-12095106 | None:intergenic |
| CCTTATGATTATAGAGAAGA+TGG | 0.466590 | 7:+12094967 | MsG0780036698.01.T01:CDS |
| CATCTTCTCTATAATCATAA+GGG | 0.467089 | 7:-12094966 | None:intergenic |
| TGTGATAGAACGCTCAATGC+AGG | 0.470121 | 7:-12095286 | None:intergenic |
| GATGGAGTGTGCCATTGGTT+GGG | 0.475221 | 7:+12095000 | MsG0780036698.01.T01:CDS |
| ATTGAGCGTTCTATCACATC+TGG | 0.490576 | 7:+12095291 | MsG0780036698.01.T01:CDS |
| GAATTTGATGTGATGGGATC+CGG | 0.495590 | 7:+12094616 | MsG0780036698.01.T01:CDS |
| GCTTAGATGGAGTGTGCCAT+TGG | 0.500648 | 7:+12094995 | MsG0780036698.01.T01:CDS |
| ATCCCATCACATCAAATTCA+GGG | 0.514751 | 7:-12094612 | None:intergenic |
| AGTTTCAAGTTGGAGTAAAG+AGG | 0.521946 | 7:-12094485 | None:intergenic |
| TGCCATTGGTTGGGTGAAGA+TGG | 0.526180 | 7:+12095009 | MsG0780036698.01.T01:CDS |
| ATCATTTGATCTAAGCAAAG+AGG | 0.529073 | 7:+12095068 | MsG0780036698.01.T01:CDS |
| CTTCACGAGTCTTCACGCTA+TGG | 0.534936 | 7:+12094742 | MsG0780036698.01.T01:CDS |
| AAATTGGTGTGAAAGAATCA+TGG | 0.539593 | 7:+12095235 | MsG0780036698.01.T01:CDS |
| TAGAACGCTCAATGCAGGGT+TGG | 0.539897 | 7:-12095281 | None:intergenic |
| AACCCTAAAGTCGATGGAGA+TGG | 0.542463 | 7:+12094255 | None:intergenic |
| CAATAGTCACAGTTTCAAGT+TGG | 0.544297 | 7:-12094495 | None:intergenic |
| TAACCCTGAATTTGATGTGA+TGG | 0.547174 | 7:+12094609 | MsG0780036698.01.T01:CDS |
| GAACGCTCAATGCAGGGTTG+GGG | 0.548087 | 7:-12095279 | None:intergenic |
| TCAAATCGTATGGAAAGACT+TGG | 0.549723 | 7:+12095137 | MsG0780036698.01.T01:CDS |
| AAGAATCTCGTTAATACTAC+CGG | 0.550720 | 7:-12094635 | None:intergenic |
| CTATCACACTCTGAGGGTAT+GGG | 0.557681 | 7:-12095105 | None:intergenic |
| CAAATAATAGAGTTGTATTG+TGG | 0.559212 | 7:+12094680 | MsG0780036698.01.T01:CDS |
| TATATTCTCTTTCTGGCGAG+AGG | 0.564406 | 7:+12094539 | MsG0780036698.01.T01:CDS |
| AGGAACAACCTTAAATTCAT+CGG | 0.577850 | 7:-12094713 | None:intergenic |
| AATCGTATGGAAAGACTTGG+TGG | 0.580147 | 7:+12095140 | MsG0780036698.01.T01:CDS |
| AACCCTGAATTTGATGTGAT+GGG | 0.586219 | 7:+12094610 | MsG0780036698.01.T01:CDS |
| TTGGCCAAATCCATTTGAAG+AGG | 0.592078 | 7:+12094585 | MsG0780036698.01.T01:CDS |
| GTGATAGAACGCTCAATGCA+GGG | 0.601959 | 7:-12095285 | None:intergenic |
| TTGGGTGCGTACGCAAATCG+TGG | 0.609698 | 7:+12094380 | MsG0780036698.01.T01:CDS |
| ATTACGACTATCACACTCTG+AGG | 0.612714 | 7:-12095112 | None:intergenic |
| GATGTTGAAATTACTAGACA+TGG | 0.615329 | 7:+12094766 | MsG0780036698.01.T01:CDS |
| AGCCATCTTCACCCAACCAA+TGG | 0.617792 | 7:-12095011 | None:intergenic |
| TCACGAGTCTTCACGCTATG+GGG | 0.618135 | 7:+12094744 | MsG0780036698.01.T01:CDS |
| TGCAGGGTTGGGGACAAACA+AGG | 0.621409 | 7:-12095269 | None:intergenic |
| TCCTCCACGAGTTAGTTCGT+AGG | 0.655675 | 7:-12094927 | None:intergenic |
| ATAGCCTACGAACTAACTCG+TGG | 0.656719 | 7:+12094923 | MsG0780036698.01.T01:CDS |
| CATAGCGTGAAGACTCGTGA+AGG | 0.657120 | 7:-12094741 | None:intergenic |
| GGAGATGGAGAAATCTATTG+CGG | 0.660339 | 7:+12094270 | MsG0780036698.01.T01:CDS |
| GCCTACGAACTAACTCGTGG+AGG | 0.662179 | 7:+12094926 | MsG0780036698.01.T01:CDS |
| TTACGACTATCACACTCTGA+GGG | 0.666308 | 7:-12095111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAACTAAATTAGAT+TGG | + | Chr7:12094566-12094585 | MsG0780036698.01.T01:CDS | 10.0% |
| !!! | ATTTCTAACCTTTTTTATTT+TGG | - | Chr7:12094296-12094315 | None:intergenic | 15.0% |
| !!! | CCTTTTCATATATCAATTTT+GGG | + | Chr7:12095210-12095229 | MsG0780036698.01.T01:CDS | 20.0% |
| !!! | TCCTTTTCATATATCAATTT+TGG | + | Chr7:12095209-12095228 | MsG0780036698.01.T01:CDS | 20.0% |
| ! | CAAATAATAGAGTTGTATTG+TGG | + | Chr7:12094680-12094699 | MsG0780036698.01.T01:CDS | 25.0% |
| ! | CACAATACAACTCTATTATT+TGG | - | Chr7:12094682-12094701 | None:intergenic | 25.0% |
| ! | CATCTTCTCTATAATCATAA+GGG | - | Chr7:12094969-12094988 | None:intergenic | 25.0% |
| ! | CCCAAAATTGATATATGAAA+AGG | - | Chr7:12095213-12095232 | None:intergenic | 25.0% |
| ! | TTAGTGTTATATTCTCTTTC+TGG | + | Chr7:12094532-12094551 | MsG0780036698.01.T01:CDS | 25.0% |
| ! | TTCTATTGGAGATGAATATA+AGG | + | Chr7:12094801-12094820 | MsG0780036698.01.T01:CDS | 25.0% |
| !! | ATGTATCTTATGAACTCTTT+TGG | + | Chr7:12094893-12094912 | MsG0780036698.01.T01:CDS | 25.0% |
| !! | TGAAATCATTGAATCGTTTT+GGG | + | Chr7:12094362-12094381 | MsG0780036698.01.T01:CDS | 25.0% |
| !! | TGACATTGATGATTTATCAT+TGG | + | Chr7:12094867-12094886 | MsG0780036698.01.T01:CDS | 25.0% |
| !! | TGTATCTTATGAACTCTTTT+GGG | + | Chr7:12094894-12094913 | MsG0780036698.01.T01:CDS | 25.0% |
| !!! | ATATCAATTTTGGGTGAAAT+TGG | + | Chr7:12095219-12095238 | MsG0780036698.01.T01:CDS | 25.0% |
| !!! | TCATTATCAATCTCACTTTT+TGG | - | Chr7:12094850-12094869 | None:intergenic | 25.0% |
| AAATTGGTGTGAAAGAATCA+TGG | + | Chr7:12095235-12095254 | MsG0780036698.01.T01:CDS | 30.0% | |
| AAGAATCTCGTTAATACTAC+CGG | - | Chr7:12094638-12094657 | None:intergenic | 30.0% | |
| AGGAACAACCTTAAATTCAT+CGG | - | Chr7:12094716-12094735 | None:intergenic | 30.0% | |
| ATCATTTGATCTAAGCAAAG+AGG | + | Chr7:12095068-12095087 | MsG0780036698.01.T01:CDS | 30.0% | |
| CCATCTTCTCTATAATCATA+AGG | - | Chr7:12094970-12094989 | None:intergenic | 30.0% | |
| CCTTATGATTATAGAGAAGA+TGG | + | Chr7:12094967-12094986 | MsG0780036698.01.T01:CDS | 30.0% | |
| GAAACATGCTCATGAAATAA+GGG | - | Chr7:12094423-12094442 | None:intergenic | 30.0% | |
| GATGTTGAAATTACTAGACA+TGG | + | Chr7:12094766-12094785 | MsG0780036698.01.T01:CDS | 30.0% | |
| TATTAACGAGATTCTTTGTC+TGG | + | Chr7:12094642-12094661 | MsG0780036698.01.T01:CDS | 30.0% | |
| TATTGCGGCCAAAATAAAAA+AGG | + | Chr7:12094285-12094304 | MsG0780036698.01.T01:CDS | 30.0% | |
| ! | GAAATTACTAGACATGGTTT+TGG | + | Chr7:12094772-12094791 | MsG0780036698.01.T01:CDS | 30.0% |
| ! | GTCGTAATTTTCAAATCGTA+TGG | + | Chr7:12095127-12095146 | MsG0780036698.01.T01:CDS | 30.0% |
| ! | GTGAAATCATTGAATCGTTT+TGG | + | Chr7:12094361-12094380 | MsG0780036698.01.T01:CDS | 30.0% |
| !!! | GGTTTTGGTTATGTTTCTAT+TGG | + | Chr7:12094787-12094806 | MsG0780036698.01.T01:CDS | 30.0% |
| AACCCTGAATTTGATGTGAT+GGG | + | Chr7:12094610-12094629 | MsG0780036698.01.T01:CDS | 35.0% | |
| ACCTTAAATTCATCGGTAGT+TGG | - | Chr7:12094709-12094728 | None:intergenic | 35.0% | |
| ATCCCATCACATCAAATTCA+GGG | - | Chr7:12094615-12094634 | None:intergenic | 35.0% | |
| CAACTTGAAACTGTGACTAT+TGG | + | Chr7:12094496-12094515 | MsG0780036698.01.T01:CDS | 35.0% | |
| CGAAACATGCTCATGAAATA+AGG | - | Chr7:12094424-12094443 | None:intergenic | 35.0% | |
| TAACCCTGAATTTGATGTGA+TGG | + | Chr7:12094609-12094628 | MsG0780036698.01.T01:CDS | 35.0% | |
| TCAAATCGTATGGAAAGACT+TGG | + | Chr7:12095137-12095156 | MsG0780036698.01.T01:CDS | 35.0% | |
| TCCAACTACCGATGAATTTA+AGG | + | Chr7:12094705-12094724 | MsG0780036698.01.T01:CDS | 35.0% | |
| ! | CAATAGTCACAGTTTCAAGT+TGG | - | Chr7:12094498-12094517 | None:intergenic | 35.0% |
| ! | GAAGATGGAATTTGCTTAGA+TGG | + | Chr7:12094982-12095001 | MsG0780036698.01.T01:CDS | 35.0% |
| ! | TTAGCCTCTTCAAATGGATT+TGG | - | Chr7:12094592-12094611 | None:intergenic | 35.0% |
| !! | AAAGACTTGGTGGTGTTAAA+TGG | + | Chr7:12095150-12095169 | MsG0780036698.01.T01:CDS | 35.0% |
| !! | AGTTTCAAGTTGGAGTAAAG+AGG | - | Chr7:12094488-12094507 | None:intergenic | 35.0% |
| AACGAGATTCTTTGTCTGGT+TGG | + | Chr7:12094646-12094665 | MsG0780036698.01.T01:CDS | 40.0% | |
| AATCGTATGGAAAGACTTGG+TGG | + | Chr7:12095140-12095159 | MsG0780036698.01.T01:CDS | 40.0% | |
| ATTACGACTATCACACTCTG+AGG | - | Chr7:12095115-12095134 | None:intergenic | 40.0% | |
| ATTGAGCGTTCTATCACATC+TGG | + | Chr7:12095291-12095310 | MsG0780036698.01.T01:CDS | 40.0% | |
| GATCCCATCACATCAAATTC+AGG | - | Chr7:12094616-12094635 | None:intergenic | 40.0% | |
| GGAGATGGAGAAATCTATTG+CGG | + | Chr7:12094270-12094289 | MsG0780036698.01.T01:CDS | 40.0% | |
| TTACGACTATCACACTCTGA+GGG | - | Chr7:12095114-12095133 | None:intergenic | 40.0% | |
| TTGGCCAAATCCATTTGAAG+AGG | + | Chr7:12094585-12094604 | MsG0780036698.01.T01:CDS | 40.0% | |
| ! | GAATTTGATGTGATGGGATC+CGG | + | Chr7:12094616-12094635 | MsG0780036698.01.T01:CDS | 40.0% |
| ! | GGGTATGGGTGTTATCAATA+AGG | - | Chr7:12095094-12095113 | None:intergenic | 40.0% |
| ! | TATATTCTCTTTCTGGCGAG+AGG | + | Chr7:12094539-12094558 | MsG0780036698.01.T01:CDS | 40.0% |
| ATAGCCTACGAACTAACTCG+TGG | + | Chr7:12094923-12094942 | MsG0780036698.01.T01:CDS | 45.0% | |
| GAAGACTCGTGAAGGCTAAT+AGG | - | Chr7:12094736-12094755 | None:intergenic | 45.0% | |
| GTGATAGAACGCTCAATGCA+GGG | - | Chr7:12095288-12095307 | None:intergenic | 45.0% | |
| TGTGATAGAACGCTCAATGC+AGG | - | Chr7:12095289-12095308 | None:intergenic | 45.0% | |
| TTCACGAGTCTTCACGCTAT+GGG | + | Chr7:12094743-12094762 | MsG0780036698.01.T01:CDS | 45.0% | |
| ! | ACTATCACACTCTGAGGGTA+TGG | - | Chr7:12095109-12095128 | None:intergenic | 45.0% |
| ! | CTATCACACTCTGAGGGTAT+GGG | - | Chr7:12095108-12095127 | None:intergenic | 45.0% |
| !! | TCAGGGTTAGCCTCTTCAAA+TGG | - | Chr7:12094598-12094617 | None:intergenic | 45.0% |
| AGAACGCTCAATGCAGGGTT+GGG | - | Chr7:12095283-12095302 | None:intergenic | 50.0% | |
| AGCCATCTTCACCCAACCAA+TGG | - | Chr7:12095014-12095033 | None:intergenic | 50.0% | |
| CATAGCGTGAAGACTCGTGA+AGG | - | Chr7:12094744-12094763 | None:intergenic | 50.0% | |
| CTTCACGAGTCTTCACGCTA+TGG | + | Chr7:12094742-12094761 | MsG0780036698.01.T01:CDS | 50.0% | |
| GCTTAGATGGAGTGTGCCAT+TGG | + | Chr7:12094995-12095014 | MsG0780036698.01.T01:CDS | 50.0% | |
| TAGAACGCTCAATGCAGGGT+TGG | - | Chr7:12095284-12095303 | None:intergenic | 50.0% | |
| TCACGAGTCTTCACGCTATG+GGG | + | Chr7:12094744-12094763 | MsG0780036698.01.T01:CDS | 50.0% | |
| TCCTCCACGAGTTAGTTCGT+AGG | - | Chr7:12094930-12094949 | None:intergenic | 50.0% | |
| ! | AGATGGAGTGTGCCATTGGT+TGG | + | Chr7:12094999-12095018 | MsG0780036698.01.T01:CDS | 50.0% |
| ! | GATGGAGTGTGCCATTGGTT+GGG | + | Chr7:12095000-12095019 | MsG0780036698.01.T01:CDS | 50.0% |
| ! | TGCCATTGGTTGGGTGAAGA+TGG | + | Chr7:12095009-12095028 | MsG0780036698.01.T01:CDS | 50.0% |
| GAACGCTCAATGCAGGGTTG+GGG | - | Chr7:12095282-12095301 | None:intergenic | 55.0% | |
| GCCTACGAACTAACTCGTGG+AGG | + | Chr7:12094926-12094945 | MsG0780036698.01.T01:CDS | 55.0% | |
| TGCAGGGTTGGGGACAAACA+AGG | - | Chr7:12095272-12095291 | None:intergenic | 55.0% | |
| TTGGGTGCGTACGCAAATCG+TGG | + | Chr7:12094380-12094399 | MsG0780036698.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 12094268 | 12095323 | 12094268 | ID=MsG0780036698.01;Name=MsG0780036698.01 |
| Chr7 | mRNA | 12094268 | 12095323 | 12094268 | ID=MsG0780036698.01.T01;Parent=MsG0780036698.01;Name=MsG0780036698.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|351 |
| Chr7 | exon | 12094268 | 12095323 | 12094268 | ID=MsG0780036698.01.T01:exon:2468;Parent=MsG0780036698.01.T01 |
| Chr7 | CDS | 12094268 | 12095323 | 12094268 | ID=MsG0780036698.01.T01:cds;Parent=MsG0780036698.01.T01 |
| Gene Sequence |
| Protein sequence |
