AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035275.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035275.01.T01 MTR_0129s0070 52.239 402 171 10 3 393 6 397 6.75e-124 364
MsG0680035275.01.T01 MTR_4g117550 50.498 402 157 10 2 393 5 374 4.21e-120 353
MsG0680035275.01.T01 MTR_0129s0120 52.243 379 161 9 3 371 6 374 8.03e-116 343
MsG0680035275.01.T01 MTR_2g038680 48.193 415 168 12 9 391 11 410 8.34e-113 336
MsG0680035275.01.T01 MTR_0129s0050 49.640 417 166 13 6 392 6 408 3.20e-110 329
MsG0680035275.01.T01 MTR_8g063440 47.449 392 187 10 8 393 6 384 4.54e-109 325
MsG0680035275.01.T01 MTR_5g097330 46.402 403 185 11 6 388 8 399 1.89e-106 319
MsG0680035275.01.T01 MTR_0054s0100 45.411 414 191 12 4 393 7 409 2.01e-104 314
MsG0680035275.01.T01 MTR_0054s0090 45.169 414 190 13 4 393 7 407 2.91e-102 309
MsG0680035275.01.T01 MTR_6g090180 45.813 406 187 11 6 388 39 434 3.36e-102 310
MsG0680035275.01.T01 MTR_6g086825 45.320 406 188 12 11 393 67 461 1.02e-101 309
MsG0680035275.01.T01 MTR_6g079770 45.783 415 187 11 6 390 9 415 1.36e-101 307
MsG0680035275.01.T01 MTR_2g022000 46.115 399 173 11 5 371 7 395 1.27e-100 305
MsG0680035275.01.T01 MTR_2g021800 43.914 419 197 11 5 393 7 417 3.60e-98 299
MsG0680035275.01.T01 MTR_8g041270 45.433 416 180 12 8 393 9 407 3.41e-97 296
MsG0680035275.01.T01 MTR_2g066170 44.584 397 200 12 5 393 3 387 7.69e-97 294
MsG0680035275.01.T01 MTR_7g017130 43.970 398 202 8 7 393 11 398 2.51e-96 293
MsG0680035275.01.T01 MTR_8g012090 47.011 368 137 10 9 362 11 334 4.02e-96 290
MsG0680035275.01.T01 MTR_0134s0060 43.062 418 200 10 6 393 4 413 9.02e-96 292
MsG0680035275.01.T01 MTR_1g007450 46.632 386 171 9 8 373 6 376 1.23e-95 292
MsG0680035275.01.T01 MTR_4g102410 45.522 402 196 11 6 390 53 448 1.66e-95 293
MsG0680035275.01.T01 MTR_2g021770 42.271 414 206 10 5 393 3 408 2.26e-95 291
MsG0680035275.01.T01 MTR_7g017170 43.659 410 198 9 7 393 11 410 3.29e-95 291
MsG0680035275.01.T01 MTR_2g104340 44.471 416 189 13 1 393 1 397 1.22e-94 289
MsG0680035275.01.T01 MTR_3g011120 45.995 387 181 15 5 382 3 370 2.22e-94 287
MsG0680035275.01.T01 MTR_5g097220 43.780 418 176 14 9 388 8 404 2.51e-93 286
MsG0680035275.01.T01 MTR_6g080680 44.279 402 176 11 8 386 13 389 1.12e-92 284
MsG0680035275.01.T01 MTR_7g069550 44.975 398 182 15 8 383 8 390 1.71e-92 283
MsG0680035275.01.T01 MTR_2g066200 43.284 402 198 14 6 393 4 389 1.72e-92 283
MsG0680035275.01.T01 MTR_8g464770 44.909 383 191 12 9 386 7 374 2.20e-92 282
MsG0680035275.01.T01 MTR_7g017040 42.651 415 190 11 4 392 6 398 4.27e-92 283
MsG0680035275.01.T01 MTR_6g461660 45.550 382 178 9 6 371 11 378 7.21e-92 282
MsG0680035275.01.T01 MTR_4g130330 42.963 405 191 11 11 392 4 391 8.28e-92 281
MsG0680035275.01.T01 MTR_8g467670 42.714 398 206 13 2 394 1 381 1.32e-91 281
MsG0680035275.01.T01 MTR_4g028510 44.279 402 186 13 14 392 16 402 1.67e-91 283
MsG0680035275.01.T01 MTR_4g028680 43.392 401 197 11 11 393 13 401 2.52e-91 281
MsG0680035275.01.T01 MTR_8g039500 44.932 365 173 9 5 362 3 346 2.60e-91 279
MsG0680035275.01.T01 MTR_5g097350 45.202 396 178 13 9 388 11 383 3.10e-91 280
MsG0680035275.01.T01 MTR_4g014370 42.143 420 191 15 8 391 5 408 5.43e-91 280
MsG0680035275.01.T01 MTR_2g104280 43.627 408 193 11 9 391 9 404 1.65e-90 279
MsG0680035275.01.T01 MTR_5g097680 42.488 426 193 14 8 391 11 426 7.74e-90 278
MsG0680035275.01.T01 MTR_5g096910 42.145 401 200 13 6 391 9 392 1.77e-89 276
MsG0680035275.01.T01 MTR_5g096630 41.667 408 208 10 8 391 12 413 2.64e-89 276
MsG0680035275.01.T01 MTR_4g028660 43.544 395 190 14 11 386 13 393 4.21e-89 275
MsG0680035275.01.T01 MTR_4g027450 43.544 395 190 14 11 386 13 393 4.21e-89 275
MsG0680035275.01.T01 MTR_5g037680 42.928 403 184 16 7 386 1 380 6.62e-89 276
MsG0680035275.01.T01 MTR_1g007410 44.810 395 184 14 9 383 17 397 3.75e-88 273
MsG0680035275.01.T01 MTR_8g033140 40.421 428 188 12 10 393 15 419 1.04e-87 272
MsG0680035275.01.T01 MTR_6g079810 43.171 410 195 14 8 390 63 461 4.87e-87 271
MsG0680035275.01.T01 MTR_4g055820 45.232 367 173 9 1 348 1 358 1.54e-86 267
MsG0680035275.01.T01 MTR_2g021950 41.414 396 205 12 8 388 10 393 1.94e-86 268
MsG0680035275.01.T01 MTR_7g111700 42.537 402 165 11 11 393 12 366 6.27e-86 266
MsG0680035275.01.T01 MTR_6g478230 41.928 415 187 13 7 393 20 408 9.53e-85 264
MsG0680035275.01.T01 MTR_5g059430 39.573 422 201 16 7 390 19 424 2.24e-84 263
MsG0680035275.01.T01 MTR_2g066150 41.353 399 186 14 4 393 2 361 7.45e-83 258
MsG0680035275.01.T01 MTR_5g069390 41.278 407 206 14 7 390 19 415 1.22e-82 261
MsG0680035275.01.T01 MTR_2g065860 41.457 398 207 12 8 393 6 389 3.93e-82 256
MsG0680035275.01.T01 MTR_2g034700 43.750 400 178 16 2 385 1 369 6.73e-82 255
MsG0680035275.01.T01 MTR_0831s0010 41.266 395 199 13 11 392 47 421 1.78e-81 256
MsG0680035275.01.T01 MTR_1g053510 43.035 402 190 11 11 386 12 400 2.17e-81 255
MsG0680035275.01.T01 MTR_4g028750 42.268 388 185 15 11 377 13 382 5.30e-80 251
MsG0680035275.01.T01 MTR_2g064950 40.447 403 192 14 6 383 2 381 7.72e-80 251
MsG0680035275.01.T01 MTR_8g046310 42.377 387 183 15 12 386 14 372 8.76e-80 250
MsG0680035275.01.T01 MTR_7g079640 40.642 374 188 10 8 372 7 355 1.74e-78 247
MsG0680035275.01.T01 MTR_1g007430 44.345 336 160 8 25 351 7 324 1.80e-78 245
MsG0680035275.01.T01 MTR_8g064890 38.765 405 214 11 5 393 3 389 9.51e-78 245
MsG0680035275.01.T01 MTR_2g065840 39.098 399 214 12 8 392 6 389 3.83e-77 244
MsG0680035275.01.T01 MTR_5g072060 42.328 378 163 13 12 368 4 347 9.53e-77 249
MsG0680035275.01.T01 MTR_8g013000 42.188 384 187 14 6 370 2 369 3.22e-76 242
MsG0680035275.01.T01 MTR_5g024260 43.455 382 183 14 11 373 19 386 5.76e-76 241
MsG0680035275.01.T01 MTR_5g091140 41.103 399 185 14 6 384 40 408 1.10e-75 241
MsG0680035275.01.T01 MTR_8g033090 40.821 414 199 13 11 391 11 411 1.14e-75 241
MsG0680035275.01.T01 MTR_8g032980 38.149 443 203 16 1 393 1 422 3.17e-74 237
MsG0680035275.01.T01 MTR_8g036970 40.669 359 146 10 20 371 4 302 3.71e-72 230
MsG0680035275.01.T01 MTR_7g016930 42.340 359 159 10 8 353 10 333 7.37e-72 228
MsG0680035275.01.T01 MTR_8g046200 37.237 427 196 13 7 383 9 413 3.29e-71 229
MsG0680035275.01.T01 MTR_8g063330 42.541 362 174 17 5 348 3 348 5.49e-71 230
MsG0680035275.01.T01 MTR_8g033110 40.431 418 198 17 11 391 11 414 1.09e-70 228
MsG0680035275.01.T01 MTR_5g092850 38.601 386 188 12 13 371 15 378 3.62e-70 226
MsG0680035275.01.T01 MTR_1g050308 39.196 398 159 15 5 393 25 348 2.28e-69 222
MsG0680035275.01.T01 MTR_8g046220 38.462 429 191 15 2 386 1 400 5.27e-69 223
MsG0680035275.01.T01 MTR_4g007940 39.828 349 173 14 65 389 4 339 6.96e-69 221
MsG0680035275.01.T01 MTR_5g022850 37.531 405 172 13 9 393 11 354 2.03e-68 220
MsG0680035275.01.T01 MTR_6g090250 39.394 396 189 11 34 386 31 418 1.17e-67 220
MsG0680035275.01.T01 MTR_5g092860 38.933 375 163 13 33 378 21 358 3.31e-67 217
MsG0680035275.01.T01 MTR_8g018110 37.101 407 209 10 11 391 11 396 3.55e-67 218
MsG0680035275.01.T01 MTR_8g064790 35.354 396 189 9 5 393 3 338 6.96e-66 213
MsG0680035275.01.T01 MTR_5g064700 40.789 380 173 17 53 392 1 368 8.99e-66 214
MsG0680035275.01.T01 MTR_5g074850 39.494 395 185 17 8 370 29 401 9.37e-66 225
MsG0680035275.01.T01 MTR_6g079790 43.302 321 144 12 99 393 2 310 3.81e-65 210
MsG0680035275.01.T01 MTR_5g074800 40.563 355 167 14 53 383 1 335 1.10e-64 210
MsG0680035275.01.T01 MTR_6g078010 40.282 355 167 14 51 386 1 329 5.44e-64 208
MsG0680035275.01.T01 MTR_5g086590 48.276 232 105 7 136 365 13 231 9.73e-61 196
MsG0680035275.01.T01 MTR_5g075370 37.374 396 189 18 11 370 5 377 2.56e-59 206
MsG0680035275.01.T01 MTR_7g104710 41.853 313 126 9 6 300 9 283 7.64e-59 194
MsG0680035275.01.T01 MTR_1g098180 36.228 403 186 15 11 393 16 367 1.26e-58 195
MsG0680035275.01.T01 MTR_7g023800 36.103 349 162 9 53 385 1 304 2.92e-58 192
MsG0680035275.01.T01 MTR_6g087620 39.677 310 132 12 92 382 6 279 7.00e-58 190
MsG0680035275.01.T01 MTR_5g096900 41.742 333 151 12 5 316 3 313 1.98e-57 191
MsG0680035275.01.T01 MTR_8g063370 34.091 396 223 14 1 384 15 384 2.03e-57 193
MsG0680035275.01.T01 MTR_1g050312 40.594 303 138 12 79 371 3 273 1.56e-54 182
MsG0680035275.01.T01 MTR_5g068490 40.594 303 143 13 96 393 8 278 2.97e-54 181
MsG0680035275.01.T01 MTR_5g076490 40.599 367 162 13 51 392 1 336 8.95e-54 181
MsG0680035275.01.T01 MTR_5g097820 43.446 267 119 12 9 256 16 269 2.84e-53 178
MsG0680035275.01.T01 MTR_5g043605 37.778 315 160 12 88 389 45 336 7.17e-53 180
MsG0680035275.01.T01 MTR_8g063310 33.333 405 223 18 1 383 9 388 3.69e-52 179
MsG0680035275.01.T01 MTR_6g090260 50.270 185 76 4 192 369 63 238 3.02e-51 172
MsG0680035275.01.T01 MTR_6g090260 51.190 84 32 2 6 80 11 94 1.30e-14 73.6
MsG0680035275.01.T01 MTR_6g004450 40.753 292 138 8 117 394 1 271 9.63e-51 172
MsG0680035275.01.T01 MTR_6g070880 43.277 238 114 7 9 229 27 260 6.44e-50 169
MsG0680035275.01.T01 MTR_6g071420 43.277 238 114 7 9 229 27 260 6.44e-50 169
MsG0680035275.01.T01 MTR_1g076810 43.933 239 122 7 6 239 10 241 1.49e-49 177
MsG0680035275.01.T01 MTR_2g021920 42.500 240 112 9 169 388 36 269 5.15e-48 164
MsG0680035275.01.T01 MTR_8g033000 34.278 388 184 14 51 392 1 363 5.58e-48 167
MsG0680035275.01.T01 MTR_8g063350 32.426 404 185 15 1 383 1 337 6.03e-48 166
MsG0680035275.01.T01 MTR_5g094350 41.197 284 121 11 10 268 9 271 7.25e-48 164
MsG0680035275.01.T01 MTR_5g037190 40.370 270 123 5 4 259 6 251 7.66e-47 160
MsG0680035275.01.T01 MTR_5g023970 46.500 200 91 7 201 393 7 197 3.87e-46 157
MsG0680035275.01.T01 MTR_5g097850 45.213 188 88 4 213 391 63 244 1.50e-45 157
MsG0680035275.01.T01 MTR_4g016000 43.810 210 90 8 141 343 2 190 7.49e-45 154
MsG0680035275.01.T01 MTR_2g104260 40.727 275 136 7 8 262 8 275 5.87e-43 151
MsG0680035275.01.T01 MTR_6g465360 45.078 193 93 5 6 188 54 243 8.08e-43 151
MsG0680035275.01.T01 MTR_5g098950 40.465 215 97 4 138 351 90 274 5.00e-41 146
MsG0680035275.01.T01 MTR_3g018750 40.650 246 108 10 170 388 3 237 1.70e-40 144
MsG0680035275.01.T01 MTR_7g019250 41.485 229 105 7 150 370 206 413 1.36e-39 147
MsG0680035275.01.T01 MTR_1g115205 40.164 244 98 6 14 245 29 236 1.54e-39 142
MsG0680035275.01.T01 MTR_4g014370 39.000 200 101 5 202 391 148 336 1.80e-38 141
MsG0680035275.01.T01 MTR_4g014370 51.181 127 57 4 8 131 16 140 3.32e-27 110
MsG0680035275.01.T01 MTR_8g035690 37.638 271 123 10 158 391 41 302 2.25e-38 140
MsG0680035275.01.T01 MTR_8g073570 46.023 176 88 5 6 181 2 170 5.76e-38 135
MsG0680035275.01.T01 MTR_6g009350 41.294 201 91 8 170 356 8 195 1.03e-34 127
MsG0680035275.01.T01 MTR_5g066420 45.390 141 63 4 239 370 2 137 7.52e-33 120
MsG0680035275.01.T01 MTR_3g030620 44.643 168 76 7 234 390 19 180 5.09e-31 117
MsG0680035275.01.T01 MTR_1g047080 30.986 355 162 16 51 393 1 284 2.48e-30 118
MsG0680035275.01.T01 MTR_6g079730 48.905 137 64 2 251 386 13 144 3.22e-30 114
MsG0680035275.01.T01 MTR_5g096920 42.675 157 77 6 239 390 2 150 5.40e-30 113
MsG0680035275.01.T01 MTR_7g017150 40.394 203 98 7 203 393 77 268 3.02e-29 114
MsG0680035275.01.T01 MTR_7g017120 39.901 203 99 7 203 393 76 267 9.45e-29 113
MsG0680035275.01.T01 MTR_7g101200 35.371 229 96 9 134 348 36 226 5.96e-28 110
MsG0680035275.01.T01 MTR_3g019290 36.715 207 89 6 11 214 11 178 8.18e-28 108
MsG0680035275.01.T01 MTR_5g097540 42.135 178 82 8 207 374 96 262 1.64e-27 110
MsG0680035275.01.T01 MTR_5g091150 35.294 221 80 9 99 294 2 184 6.11e-27 106
MsG0680035275.01.T01 MTR_5g036250 46.847 111 57 1 284 394 5 113 3.54e-26 104
MsG0680035275.01.T01 MTR_5g096070 43.353 173 61 6 8 177 20 158 6.14e-26 102
MsG0680035275.01.T01 MTR_0667s0010 27.164 335 196 14 10 327 2 305 2.64e-24 103
MsG0680035275.01.T01 MTR_5g097650 39.597 149 78 3 11 159 19 155 5.43e-24 97.4
MsG0680035275.01.T01 MTR_1g068835 24.728 368 224 14 14 365 4 334 2.49e-22 97.8
MsG0680035275.01.T01 MTR_2g022020 37.705 122 70 2 267 388 1 116 3.79e-22 91.3
MsG0680035275.01.T01 MTR_3g047580 37.333 150 66 4 4 150 3 127 4.48e-22 91.3
MsG0680035275.01.T01 MTR_5g097660 43.860 114 57 4 272 383 3 111 1.98e-21 89.4
MsG0680035275.01.T01 MTR_5g086780 40.741 108 59 1 262 369 126 228 3.20e-21 92.0
MsG0680035275.01.T01 MTR_5g086780 54.286 70 28 1 6 75 8 73 4.04e-11 62.8
MsG0680035275.01.T01 MTR_2g028110 26.558 369 220 16 14 366 4 337 1.84e-20 92.4
MsG0680035275.01.T01 MTR_1g094210 25.490 408 220 18 2 380 45 397 4.67e-20 91.7
MsG0680035275.01.T01 MTR_2g031720 26.329 395 235 19 14 391 6 361 1.07e-19 90.5
MsG0680035275.01.T01 MTR_2g028160 27.083 336 207 12 10 327 1 316 1.84e-19 90.1
MsG0680035275.01.T01 MTR_4g023080 25.570 395 234 14 8 390 3 349 2.30e-19 89.0
MsG0680035275.01.T01 MTR_2g024110 26.331 338 201 16 14 340 4 304 6.11e-19 87.8
MsG0680035275.01.T01 MTR_8g041440 44.860 107 40 1 9 115 10 97 6.57e-19 82.0
MsG0680035275.01.T01 MTR_2g028130 25.788 349 214 16 10 338 1 324 9.50e-19 87.8
MsG0680035275.01.T01 MTR_1g094210 24.874 398 216 18 2 371 45 387 1.10e-18 87.4
MsG0680035275.01.T01 MTR_2g426070 25.587 383 222 20 15 366 7 357 3.58e-18 85.9
MsG0680035275.01.T01 MTR_2g425980 26.549 339 198 14 10 326 1 310 4.52e-18 85.9
MsG0680035275.01.T01 MTR_0115s0020 26.230 366 227 15 13 356 9 353 5.38e-18 85.5
MsG0680035275.01.T01 MTR_3g047540 51.899 79 35 2 205 280 3 81 7.07e-18 78.6
MsG0680035275.01.T01 MTR_4g021785 25.641 390 231 15 13 390 8 350 1.10e-17 84.0
MsG0680035275.01.T01 MTR_2g021150 29.697 330 186 16 14 332 14 308 1.57e-17 84.0
MsG0680035275.01.T01 MTR_1g097560 25.065 387 215 15 4 370 26 357 1.92e-17 83.6
MsG0680035275.01.T01 MTR_2g426090 25.628 398 229 20 22 391 14 372 2.94e-17 83.2
MsG0680035275.01.T01 MTR_1g068875 24.595 370 221 19 14 365 4 333 3.84e-17 82.8
MsG0680035275.01.T01 MTR_4g023090 24.079 407 248 14 8 390 10 379 8.43e-17 81.6
MsG0680035275.01.T01 MTR_1g068860 24.346 382 227 18 14 373 4 345 1.01e-16 81.3
MsG0680035275.01.T01 MTR_1g050305 46.154 104 46 3 275 371 3 103 1.72e-16 76.3
MsG0680035275.01.T01 MTR_3g097190 62.963 54 20 0 313 366 28 81 2.63e-16 77.0
MsG0680035275.01.T01 MTR_5g057790 26.126 333 188 16 14 332 46 334 3.37e-16 80.1
MsG0680035275.01.T01 MTR_5g049560 34.161 161 90 5 51 198 1 158 5.89e-16 77.8
MsG0680035275.01.T01 MTR_2g021155 27.324 355 213 17 17 365 39 354 9.12e-16 79.7
MsG0680035275.01.T01 MTR_1g054725 23.192 401 232 19 12 380 18 374 1.19e-15 78.2
MsG0680035275.01.T01 MTR_2g031680 24.444 405 231 20 10 391 2 354 1.46e-15 78.2
MsG0680035275.01.T01 MTR_5g096050 39.823 113 48 4 239 336 2 109 1.54e-15 72.8
MsG0680035275.01.T01 MTR_4g116330 25.130 386 208 15 8 366 17 348 1.61e-15 77.8
MsG0680035275.01.T01 MTR_2g026010 23.762 404 236 15 13 391 3 359 2.27e-15 77.4
MsG0680035275.01.T01 MTR_3g014540 25.000 360 224 16 14 365 29 350 3.17e-15 77.0
MsG0680035275.01.T01 MTR_3g013740 25.937 347 205 15 9 336 39 352 5.77e-15 76.3
MsG0680035275.01.T01 MTR_5g011200 23.426 397 242 16 14 387 17 374 5.96e-15 76.3
MsG0680035275.01.T01 MTR_4g023130 24.311 399 193 14 8 390 3 308 8.63e-15 75.1
MsG0680035275.01.T01 MTR_5g057710 26.113 337 191 15 14 336 46 338 1.56e-14 75.1
MsG0680035275.01.T01 MTR_2g426060 23.547 344 203 16 10 327 2 311 2.88e-14 74.3
MsG0680035275.01.T01 MTR_3g009310 26.444 329 182 16 14 327 42 325 2.90e-14 74.3
MsG0680035275.01.T01 MTR_2g031640 24.190 401 232 21 14 391 6 357 5.10e-14 73.2
MsG0680035275.01.T01 MTR_0129s0110 46.250 80 23 2 72 151 1 60 5.51e-14 68.2
MsG0680035275.01.T01 MTR_3g083010 23.988 346 196 15 14 325 6 318 7.04e-14 73.2
MsG0680035275.01.T01 MTR_4g117850 23.775 408 225 15 13 389 22 374 7.47e-14 72.8
MsG0680035275.01.T01 MTR_4g094400 40.171 117 47 4 230 328 2 113 2.91e-13 66.6
MsG0680035275.01.T01 MTR_4g070550 24.490 343 205 16 10 327 1 314 3.35e-13 70.9
MsG0680035275.01.T01 MTR_8g099460 26.506 332 190 15 14 327 5 300 3.63e-13 70.9
MsG0680035275.01.T01 MTR_3g036335 25.419 358 204 18 14 356 41 350 4.25e-13 70.5
MsG0680035275.01.T01 MTR_4g031770 25.460 326 192 13 12 326 2 287 4.35e-13 70.5
MsG0680035275.01.T01 MTR_5g094360 45.977 87 38 5 146 226 40 123 4.76e-13 67.0
MsG0680035275.01.T01 MTR_3g436150 25.234 321 209 12 14 326 32 329 7.13e-13 70.1
MsG0680035275.01.T01 MTR_2g025420 25.135 370 196 18 10 338 2 331 8.08e-13 70.1
MsG0680035275.01.T01 MTR_4g094365 23.590 390 253 12 7 386 1 355 9.11e-13 69.3
MsG0680035275.01.T01 MTR_6g048120 25.740 338 181 15 14 326 36 328 1.31e-12 69.3
MsG0680035275.01.T01 MTR_2g046900 24.768 323 202 12 14 327 28 318 1.99e-12 68.6
MsG0680035275.01.T01 MTR_2g021252 24.269 342 210 17 17 356 50 344 2.18e-12 68.6
MsG0680035275.01.T01 MTR_1g054575 22.485 338 199 13 4 327 42 330 3.06e-12 68.6
MsG0680035275.01.T01 MTR_1g097490 22.564 390 254 15 5 386 40 389 3.55e-12 67.8
MsG0680035275.01.T01 MTR_5g097730 65.789 38 13 0 315 352 15 52 3.97e-12 61.2
MsG0680035275.01.T01 MTR_4g118380 26.943 386 224 15 7 366 1 354 4.96e-12 67.0
MsG0680035275.01.T01 MTR_3g011060 26.284 331 192 14 14 327 28 323 8.01e-12 66.6
MsG0680035275.01.T01 MTR_4g116330 27.642 246 135 9 8 244 17 228 8.50e-12 66.2
MsG0680035275.01.T01 MTR_1g037540 26.481 287 163 12 17 268 8 281 8.53e-12 66.6
MsG0680035275.01.T01 MTR_1g056710 26.100 341 181 16 3 325 28 315 8.54e-12 66.6
MsG0680035275.01.T01 MTR_4g117770 25.065 387 247 13 13 390 10 362 8.58e-12 66.6
MsG0680035275.01.T01 MTR_4g117810 25.065 387 247 13 13 390 10 362 8.58e-12 66.6
MsG0680035275.01.T01 MTR_1g009110 24.873 394 244 16 17 391 17 377 1.07e-11 66.2
MsG0680035275.01.T01 MTR_8g433040 24.173 393 241 16 9 390 13 359 1.14e-11 66.2
MsG0680035275.01.T01 MTR_8g032380 24.173 393 241 16 9 390 13 359 1.14e-11 66.2
MsG0680035275.01.T01 MTR_3g058480 25.000 268 168 11 14 270 39 284 1.43e-11 65.5
MsG0680035275.01.T01 MTR_4g109270 21.981 414 238 16 7 390 1 359 1.60e-11 65.5
MsG0680035275.01.T01 MTR_5g022420 22.775 382 222 17 5 363 14 345 1.62e-11 65.9
MsG0680035275.01.T01 MTR_5g097210 22.278 395 230 16 14 380 9 354 1.62e-11 65.5
MsG0680035275.01.T01 MTR_1g068905 25.000 264 143 13 14 268 4 221 1.64e-11 65.1
MsG0680035275.01.T01 MTR_3g030330 26.101 318 187 13 14 326 20 294 1.67e-11 65.5
MsG0680035275.01.T01 MTR_1g097330 25.846 325 186 15 14 327 16 296 1.77e-11 65.9
MsG0680035275.01.T01 MTR_3g006670 25.369 339 190 14 14 333 49 343 1.82e-11 65.9
MsG0680035275.01.T01 MTR_5g070080 24.396 414 235 19 13 390 9 380 2.14e-11 65.5
MsG0680035275.01.T01 MTR_3g034130 21.785 381 239 12 9 367 4 347 2.67e-11 65.1
MsG0680035275.01.T01 MTR_8g101580 24.173 393 217 19 22 386 54 393 2.76e-11 65.1
MsG0680035275.01.T01 MTR_2g055970 25.373 335 191 14 8 327 205 495 2.80e-11 65.5
MsG0680035275.01.T01 MTR_3g024040 27.532 316 166 17 22 326 39 302 2.94e-11 64.7
MsG0680035275.01.T01 MTR_7g079370 25.094 267 158 10 139 380 98 347 3.22e-11 64.7
MsG0680035275.01.T01 MTR_7g407070 25.228 329 205 13 14 326 32 335 3.32e-11 64.7
MsG0680035275.01.T01 MTR_0627s0010 24.425 348 215 13 14 331 38 367 3.51e-11 64.7
MsG0680035275.01.T01 MTR_3g006530 25.589 297 180 16 5 286 31 301 3.95e-11 64.7
MsG0680035275.01.T01 MTR_4g024890 24.779 339 186 14 15 326 11 307 4.20e-11 64.3
MsG0680035275.01.T01 MTR_2g031700 26.038 265 148 14 10 262 2 230 4.73e-11 63.5
MsG0680035275.01.T01 MTR_7g070830 25.464 377 193 14 1 326 8 347 4.76e-11 64.3
MsG0680035275.01.T01 MTR_3g058440 25.253 297 179 13 3 286 28 294 5.03e-11 63.5
MsG0680035275.01.T01 MTR_7g007300 23.515 404 216 18 14 386 103 444 5.33e-11 64.3
MsG0680035275.01.T01 MTR_6g087660 50.000 76 34 3 8 81 11 84 6.50e-11 61.6
MsG0680035275.01.T01 MTR_1g055135 23.980 392 237 18 13 380 12 366 8.90e-11 63.5
MsG0680035275.01.T01 MTR_6g060650 26.119 402 231 17 7 380 1 364 9.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035275.01.T01 AT4G12560 24.146 410 247 15 14 394 4 378 1.34e-14 75.5
MsG0680035275.01.T01 AT4G12560 24.146 410 247 15 14 394 4 378 1.34e-14 75.5
MsG0680035275.01.T01 AT4G12560 24.146 410 247 15 14 394 4 378 1.34e-14 75.5
MsG0680035275.01.T01 AT3G06240 23.821 403 222 19 14 370 36 399 5.15e-13 70.5
MsG0680035275.01.T01 AT3G16210 25.234 321 180 14 10 325 1 266 1.94e-12 68.6

Find 83 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGTTGATAGACGCTTTA+TGG 0.152563 6:-101355902 MsG0680035275.01.T01:CDS
AAATTCCAAAAGTTGTATTT+TGG 0.152839 6:-101356338 MsG0680035275.01.T01:CDS
AGACGCTTTATGGTGTTAAA+TGG 0.181611 6:-101355892 MsG0680035275.01.T01:CDS
TGCATTTAACGTATCACTTT+TGG 0.193898 6:-101355818 MsG0680035275.01.T01:CDS
AAAACTTCCTCTTAAATCTT+TGG 0.224400 6:-101356664 MsG0680035275.01.T01:CDS
ATAATCATCATCCACATATA+AGG 0.246883 6:+101355933 None:intergenic
TATTGAAATACTCCTTTATA+AGG 0.267977 6:-101355611 MsG0680035275.01.T01:CDS
TTTATTAGCCATCATGGATT+TGG 0.287024 6:-101356240 MsG0680035275.01.T01:CDS
ATAGCTTAAGAAGTAATTCT+TGG 0.288276 6:-101356104 MsG0680035275.01.T01:CDS
TACCAAGCTTCTCAATCATT+TGG 0.290684 6:+101355650 None:intergenic
CCTTGAATTCCTTAGTAGTT+AGG 0.293861 6:+101356313 None:intergenic
TCCCACCACACGAATCCTTC+TGG 0.295778 6:-101356134 MsG0680035275.01.T01:CDS
AAAGGAGTATTTCAATATAA+AGG 0.299879 6:+101355617 None:intergenic
ATGTCTCACATTAGACTTAG+AGG 0.308944 6:-101356526 MsG0680035275.01.T01:CDS
CCTACTGGTTATCTTACTTC+AGG 0.318949 6:-101356060 MsG0680035275.01.T01:CDS
GGTACATGTTCATGAAATAA+AGG 0.321860 6:+101356595 None:intergenic
AGGTTCCAAAATACAACTTT+TGG 0.331046 6:+101356333 None:intergenic
CCTTGTATTGACCATCCTAT+TGG 0.341729 6:-101355742 MsG0680035275.01.T01:CDS
ATTTACATAGCTTGTTTCAT+AGG 0.358469 6:+101355849 None:intergenic
ACCTTATGGTCATCACTAAT+AGG 0.372182 6:+101356210 None:intergenic
CTGCATGTCGAATCACCTTA+TGG 0.372596 6:+101356196 None:intergenic
CCTTTGTTTCCTGCTCCAAT+AGG 0.388585 6:+101355727 None:intergenic
AGAATAAAGTAAAATTAGAT+TGG 0.400275 6:-101356449 MsG0680035275.01.T01:CDS
CAAAAGATGATGAACTTGTT+CGG 0.404344 6:-101355687 MsG0680035275.01.T01:CDS
ACCAAGCTTCTCAATCATTT+GGG 0.404599 6:+101355651 None:intergenic
GGAGAAGGACTTCCTTATAA+AGG 0.421969 6:+101355599 None:intergenic
GGATGAACATGAAGCTTGTT+TGG 0.422059 6:-101356001 MsG0680035275.01.T01:CDS
CCCACCACACGAATCCTTCT+GGG 0.422921 6:-101356133 MsG0680035275.01.T01:CDS
CCTAACTACTAAGGAATTCA+AGG 0.425690 6:-101356313 MsG0680035275.01.T01:CDS
AATCGAACCAAAGATTTAAG+AGG 0.431339 6:+101356657 None:intergenic
GACCAAGGTATTAGAATGTT+GGG 0.434737 6:-101356405 MsG0680035275.01.T01:CDS
ATGGAGAATTTGAAGTCATC+AGG 0.450590 6:+101356693 None:intergenic
GACGCTTTATGGTGTTAAAT+GGG 0.463602 6:-101355891 MsG0680035275.01.T01:CDS
TAATCATCATCCACATATAA+GGG 0.465008 6:+101355934 None:intergenic
TCCTATTAGTGATGACCATA+AGG 0.479870 6:-101356211 MsG0680035275.01.T01:CDS
AACCCAACATTCTAATACCT+TGG 0.482364 6:+101356403 None:intergenic
TGACCAAGGTATTAGAATGT+TGG 0.483267 6:-101356406 MsG0680035275.01.T01:CDS
ATTGACCATCCTATTGGAGC+AGG 0.503407 6:-101355736 MsG0680035275.01.T01:CDS
TGTTTCCTGCTCCAATAGGA+TGG 0.505796 6:+101355731 None:intergenic
AACTCGGTGTGAAAGAATCA+TGG 0.518507 6:-101355792 MsG0680035275.01.T01:CDS
CCTTGGTCATCCTCGTCAAA+CGG 0.521395 6:+101356420 None:intergenic
ACACTCCATTCTTGTACACT+CGG 0.526608 6:+101356034 None:intergenic
AGATCCTCCGACAATTGAAA+AGG 0.531429 6:-101356730 MsG0680035275.01.T01:CDS
ACAAGAATGGAGTGTGTCAT+TGG 0.531939 6:-101356026 MsG0680035275.01.T01:CDS
GGTTCCCGAGTGTACAAGAA+TGG 0.532291 6:-101356039 MsG0680035275.01.T01:CDS
TCCCAGAAGGATTCGTGTGG+TGG 0.533553 6:+101356132 None:intergenic
CCAATAGGATGGTCAATACA+AGG 0.535198 6:+101355742 None:intergenic
CATCATCCACATATAAGGGT+AGG 0.538375 6:+101355938 None:intergenic
AACATCCCTACCCTTATATG+TGG 0.538862 6:-101355944 MsG0680035275.01.T01:CDS
TTAGTCCTCCGATCAGGAGA+AGG 0.540958 6:+101355584 None:intergenic
AATGCGAAAACAAGGCATCA+TGG 0.551872 6:+101356487 None:intergenic
CTCACCAGAATGCGAAAACA+AGG 0.554802 6:+101356479 None:intergenic
AGTGATACGTTAAATGCAGT+TGG 0.555484 6:+101355823 None:intergenic
ACCCAAATGATTGAGAAGCT+TGG 0.555755 6:-101355652 MsG0680035275.01.T01:CDS
TTAGATGCGTACGTAAATCA+TGG 0.555957 6:-101356635 MsG0680035275.01.T01:CDS
ATCATCCACATATAAGGGTA+GGG 0.556598 6:+101355939 None:intergenic
CTTGATGTAGATATGCCTAC+TGG 0.563644 6:-101356075 MsG0680035275.01.T01:CDS
CCCAGAAGGATTCGTGTGGT+GGG 0.567572 6:+101356133 None:intergenic
GACACTCTTTGTTTATACCA+AGG 0.571116 6:-101356366 MsG0680035275.01.T01:CDS
AAGGAAGTCCTTCTCCTGAT+CGG 0.575699 6:-101355592 MsG0680035275.01.T01:CDS
TCATCCTCGTCAAACGGAGG+TGG 0.576355 6:+101356426 None:intergenic
GATCATAACCAAATCCATGA+TGG 0.580792 6:+101356232 None:intergenic
CCTATTGGAGCAGGAAACAA+AGG 0.583784 6:-101355727 MsG0680035275.01.T01:CDS
TAAACAAAGAGTGTCATTTG+CGG 0.592252 6:+101356374 None:intergenic
GCATCATGGAGTTCGTAGGT+TGG 0.600474 6:+101356501 None:intergenic
TATTGGATATGAAATTGTTG+CGG 0.602218 6:+101356574 None:intergenic
ACTCAAGAGGACTCGAAGGA+AGG 0.611634 6:+101356289 None:intergenic
GATGGTGGCGTGAACTCAAG+AGG 0.613220 6:+101356276 None:intergenic
CACTCCATTCTTGTACACTC+GGG 0.617230 6:+101356035 None:intergenic
CAAGGCATCATGGAGTTCGT+AGG 0.620224 6:+101356497 None:intergenic
TAAGCTATATACCTCCCAGA+AGG 0.623469 6:+101356119 None:intergenic
AGAATGGAGTGTGTCATTGG+TGG 0.629907 6:-101356023 MsG0680035275.01.T01:CDS
AAAACAGTTTCATAAGATGG+TGG 0.633991 6:+101356261 None:intergenic
GAATGGAGTGTGTCATTGGT+GGG 0.635631 6:-101356022 MsG0680035275.01.T01:CDS
TTGGCCACCTCCGTTTGACG+AGG 0.638621 6:-101356430 MsG0680035275.01.T01:CDS
GGATGGTCAATACAAGGCAA+CGG 0.654523 6:+101355748 None:intergenic
GTGAACTCAAGAGGACTCGA+AGG 0.670748 6:+101356285 None:intergenic
GAAGTCCTTCTCCTGATCGG+AGG 0.671554 6:-101355589 MsG0680035275.01.T01:CDS
TGGTCATCCTCGTCAAACGG+AGG 0.693077 6:+101356423 None:intergenic
CCTGAAGTAAGATAACCAGT+AGG 0.695300 6:+101356060 None:intergenic
ACCTCCCAGAAGGATTCGTG+TGG 0.695780 6:+101356129 None:intergenic
CCGTTTGACGAGGATGACCA+AGG 0.703535 6:-101356420 MsG0680035275.01.T01:CDS
ACCACACGAATCCTTCTGGG+AGG 0.730326 6:-101356130 MsG0680035275.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAAAGTAAAATTAGAT+TGG - Chr6:101355859-101355878 MsG0680035275.01.T01:CDS 15.0%
!! ATAAAAACAGTTTCATAAGA+TGG + Chr6:101356053-101356072 None:intergenic 20.0%
!! GACGTAAGAAAAATTATTAT+TGG + Chr6:101355754-101355773 None:intergenic 20.0%
!! TATTGAAATACTCCTTTATA+AGG - Chr6:101356697-101356716 MsG0680035275.01.T01:CDS 20.0%
!!! AAAGGAGTATTTCAATATAA+AGG + Chr6:101356694-101356713 None:intergenic 20.0%
!!! AAATTCCAAAAGTTGTATTT+TGG - Chr6:101355970-101355989 MsG0680035275.01.T01:CDS 20.0%
! AAAACTTCCTCTTAAATCTT+TGG - Chr6:101355644-101355663 MsG0680035275.01.T01:CDS 25.0%
! ATAATCATCATCCACATATA+AGG + Chr6:101356378-101356397 None:intergenic 25.0%
! ATAGCTTAAGAAGTAATTCT+TGG - Chr6:101356204-101356223 MsG0680035275.01.T01:CDS 25.0%
! TAATCATCATCCACATATAA+GGG + Chr6:101356377-101356396 None:intergenic 25.0%
! TATTGGATATGAAATTGTTG+CGG + Chr6:101355737-101355756 None:intergenic 25.0%
!! TGGATTAAACTTTTTGTGTA+TGG - Chr6:101356536-101356555 MsG0680035275.01.T01:CDS 25.0%
!!! ATTTACATAGCTTGTTTCAT+AGG + Chr6:101356462-101356481 None:intergenic 25.0%
!!! CTTTTGGAATTTTAAAACCT+TGG + Chr6:101355962-101355981 None:intergenic 25.0%
AAAACAGTTTCATAAGATGG+TGG + Chr6:101356050-101356069 None:intergenic 30.0%
AATCGAACCAAAGATTTAAG+AGG + Chr6:101355654-101355673 None:intergenic 30.0%
GGTACATGTTCATGAAATAA+AGG + Chr6:101355716-101355735 None:intergenic 30.0%
TTTATTAGCCATCATGGATT+TGG - Chr6:101356068-101356087 MsG0680035275.01.T01:CDS 30.0%
! AGGTTCCAAAATACAACTTT+TGG + Chr6:101355978-101355997 None:intergenic 30.0%
! CAAAAGATGATGAACTTGTT+CGG - Chr6:101356621-101356640 MsG0680035275.01.T01:CDS 30.0%
! TGCATTTAACGTATCACTTT+TGG - Chr6:101356490-101356509 MsG0680035275.01.T01:CDS 30.0%
! TTGCTAACCTTTTCAATTGT+CGG + Chr6:101355588-101355607 None:intergenic 30.0%
!! GCATTTAACGTATCACTTTT+GGG - Chr6:101356491-101356510 MsG0680035275.01.T01:CDS 30.0%
!! TAAACAAAGAGTGTCATTTG+CGG + Chr6:101355937-101355956 None:intergenic 30.0%
!! TTTAGTTGATAGACGCTTTA+TGG - Chr6:101356406-101356425 MsG0680035275.01.T01:CDS 30.0%
!!! AAGAGGAAGTTTTGAAAGAA+TGG + Chr6:101355637-101355656 None:intergenic 30.0%
!!! ACTGTTTTTATTAGCCATCA+TGG - Chr6:101356062-101356081 MsG0680035275.01.T01:CDS 30.0%
!!! ATTTTGGAACCTAACTACTA+AGG - Chr6:101355986-101356005 MsG0680035275.01.T01:CDS 30.0%
AACCCAACATTCTAATACCT+TGG + Chr6:101355908-101355927 None:intergenic 35.0%
ACCAAGCTTCTCAATCATTT+GGG + Chr6:101356660-101356679 None:intergenic 35.0%
ACCTTATGGTCATCACTAAT+AGG + Chr6:101356101-101356120 None:intergenic 35.0%
AGTGATACGTTAAATGCAGT+TGG + Chr6:101356488-101356507 None:intergenic 35.0%
ATCATCCACATATAAGGGTA+GGG + Chr6:101356372-101356391 None:intergenic 35.0%
ATGTCTCACATTAGACTTAG+AGG - Chr6:101355782-101355801 MsG0680035275.01.T01:CDS 35.0%
CCTAACTACTAAGGAATTCA+AGG - Chr6:101355995-101356014 MsG0680035275.01.T01:CDS 35.0%
CCTTGAATTCCTTAGTAGTT+AGG + Chr6:101355998-101356017 None:intergenic 35.0%
GATCATAACCAAATCCATGA+TGG + Chr6:101356079-101356098 None:intergenic 35.0%
TACCAAGCTTCTCAATCATT+TGG + Chr6:101356661-101356680 None:intergenic 35.0%
TCCTATTAGTGATGACCATA+AGG - Chr6:101356097-101356116 MsG0680035275.01.T01:CDS 35.0%
TTAGATGCGTACGTAAATCA+TGG - Chr6:101355673-101355692 MsG0680035275.01.T01:CDS 35.0%
! AGACGCTTTATGGTGTTAAA+TGG - Chr6:101356416-101356435 MsG0680035275.01.T01:CDS 35.0%
! ATGGAGAATTTGAAGTCATC+AGG + Chr6:101355618-101355637 None:intergenic 35.0%
! GACACTCTTTGTTTATACCA+AGG - Chr6:101355942-101355961 MsG0680035275.01.T01:CDS 35.0%
! GACCAAGGTATTAGAATGTT+GGG - Chr6:101355903-101355922 MsG0680035275.01.T01:CDS 35.0%
! GACGCTTTATGGTGTTAAAT+GGG - Chr6:101356417-101356436 MsG0680035275.01.T01:CDS 35.0%
! TGACCAAGGTATTAGAATGT+TGG - Chr6:101355902-101355921 MsG0680035275.01.T01:CDS 35.0%
AACATCCCTACCCTTATATG+TGG - Chr6:101356364-101356383 MsG0680035275.01.T01:CDS 40.0%
ACAAGAATGGAGTGTGTCAT+TGG - Chr6:101356282-101356301 MsG0680035275.01.T01:CDS 40.0%
ACACTCCATTCTTGTACACT+CGG + Chr6:101356277-101356296 None:intergenic 40.0%
ACCCAAATGATTGAGAAGCT+TGG - Chr6:101356656-101356675 MsG0680035275.01.T01:CDS 40.0%
AGATCCTCCGACAATTGAAA+AGG - Chr6:101355578-101355597 MsG0680035275.01.T01:CDS 40.0%
CATCATCCACATATAAGGGT+AGG + Chr6:101356373-101356392 None:intergenic 40.0%
CCAATAGGATGGTCAATACA+AGG + Chr6:101356569-101356588 None:intergenic 40.0%
CCTGAAGTAAGATAACCAGT+AGG + Chr6:101356251-101356270 None:intergenic 40.0%
CTTGATGTAGATATGCCTAC+TGG - Chr6:101356233-101356252 MsG0680035275.01.T01:CDS 40.0%
GGAGAAGGACTTCCTTATAA+AGG + Chr6:101356712-101356731 None:intergenic 40.0%
TAAGCTATATACCTCCCAGA+AGG + Chr6:101356192-101356211 None:intergenic 40.0%
! AATGCGAAAACAAGGCATCA+TGG + Chr6:101355824-101355843 None:intergenic 40.0%
! CCTACTGGTTATCTTACTTC+AGG - Chr6:101356248-101356267 MsG0680035275.01.T01:CDS 40.0%
! CCTTGTATTGACCATCCTAT+TGG - Chr6:101356566-101356585 MsG0680035275.01.T01:CDS 40.0%
! CTAACCTTTTCAATTGTCGG+AGG + Chr6:101355585-101355604 None:intergenic 40.0%
! GGATGAACATGAAGCTTGTT+TGG - Chr6:101356307-101356326 MsG0680035275.01.T01:CDS 40.0%
!! AACTCGGTGTGAAAGAATCA+TGG - Chr6:101356516-101356535 MsG0680035275.01.T01:CDS 40.0%
!! GTATCACTTTTGGGTGAACT+CGG - Chr6:101356500-101356519 MsG0680035275.01.T01:CDS 40.0%
!!! CATTTTTTAGTCCTCCGATC+AGG + Chr6:101356733-101356752 None:intergenic 40.0%
!!! CTGAGTTTTACTGACTCTGA+AGG - Chr6:101356143-101356162 MsG0680035275.01.T01:CDS 40.0%
AAGGAAGTCCTTCTCCTGAT+CGG - Chr6:101356716-101356735 MsG0680035275.01.T01:CDS 45.0%
ATTGACCATCCTATTGGAGC+AGG - Chr6:101356572-101356591 MsG0680035275.01.T01:CDS 45.0%
CACTCCATTCTTGTACACTC+GGG + Chr6:101356276-101356295 None:intergenic 45.0%
CCTATTGGAGCAGGAAACAA+AGG - Chr6:101356581-101356600 MsG0680035275.01.T01:CDS 45.0%
CTCACCAGAATGCGAAAACA+AGG + Chr6:101355832-101355851 None:intergenic 45.0%
CTGCATGTCGAATCACCTTA+TGG + Chr6:101356115-101356134 None:intergenic 45.0%
GGATGGTCAATACAAGGCAA+CGG + Chr6:101356563-101356582 None:intergenic 45.0%
TGTTTCCTGCTCCAATAGGA+TGG + Chr6:101356580-101356599 None:intergenic 45.0%
! AGAATGGAGTGTGTCATTGG+TGG - Chr6:101356285-101356304 MsG0680035275.01.T01:CDS 45.0%
! CCTTTGTTTCCTGCTCCAAT+AGG + Chr6:101356584-101356603 None:intergenic 45.0%
! GAATGGAGTGTGTCATTGGT+GGG - Chr6:101356286-101356305 MsG0680035275.01.T01:CDS 45.0%
! TGTTTTCGCATTCTGGTGAG+AGG - Chr6:101355832-101355851 MsG0680035275.01.T01:CDS 45.0%
!!! GATGCCTTGTTTTCGCATTC+TGG - Chr6:101355825-101355844 MsG0680035275.01.T01:CDS 45.0%
ACTCAAGAGGACTCGAAGGA+AGG + Chr6:101356022-101356041 None:intergenic 50.0%
CCTTGGTCATCCTCGTCAAA+CGG + Chr6:101355891-101355910 None:intergenic 50.0%
GCATCATGGAGTTCGTAGGT+TGG + Chr6:101355810-101355829 None:intergenic 50.0%
GGTTCCCGAGTGTACAAGAA+TGG - Chr6:101356269-101356288 MsG0680035275.01.T01:CDS 50.0%
GTGAACTCAAGAGGACTCGA+AGG + Chr6:101356026-101356045 None:intergenic 50.0%
TTAGTCCTCCGATCAGGAGA+AGG + Chr6:101356727-101356746 None:intergenic 50.0%
! CAAGGCATCATGGAGTTCGT+AGG + Chr6:101355814-101355833 None:intergenic 50.0%
ACCACACGAATCCTTCTGGG+AGG - Chr6:101356178-101356197 MsG0680035275.01.T01:CDS 55.0%
ACCTCCCAGAAGGATTCGTG+TGG + Chr6:101356182-101356201 None:intergenic 55.0%
CCCACCACACGAATCCTTCT+GGG - Chr6:101356175-101356194 MsG0680035275.01.T01:CDS 55.0%
CCCAGAAGGATTCGTGTGGT+GGG + Chr6:101356178-101356197 None:intergenic 55.0%
CCGTTTGACGAGGATGACCA+AGG - Chr6:101355888-101355907 MsG0680035275.01.T01:CDS 55.0%
GAAGTCCTTCTCCTGATCGG+AGG - Chr6:101356719-101356738 MsG0680035275.01.T01:CDS 55.0%
TCATCCTCGTCAAACGGAGG+TGG + Chr6:101355885-101355904 None:intergenic 55.0%
TCCCACCACACGAATCCTTC+TGG - Chr6:101356174-101356193 MsG0680035275.01.T01:CDS 55.0%
TCCCAGAAGGATTCGTGTGG+TGG + Chr6:101356179-101356198 None:intergenic 55.0%
TGGTCATCCTCGTCAAACGG+AGG + Chr6:101355888-101355907 None:intergenic 55.0%
! GATGGTGGCGTGAACTCAAG+AGG + Chr6:101356035-101356054 None:intergenic 55.0%
TTGGCCACCTCCGTTTGACG+AGG - Chr6:101355878-101355897 MsG0680035275.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 101355573 101356757 101355573 ID=MsG0680035275.01;Name=MsG0680035275.01
Chr6 mRNA 101355573 101356757 101355573 ID=MsG0680035275.01.T01;Parent=MsG0680035275.01;Name=MsG0680035275.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|394
Chr6 exon 101355573 101356757 101355573 ID=MsG0680035275.01.T01:exon:10658;Parent=MsG0680035275.01.T01
Chr6 CDS 101355573 101356757 101355573 ID=MsG0680035275.01.T01:cds;Parent=MsG0680035275.01.T01
Gene Sequence

>MsG0680035275.01.T01

ATGATAGATCCTCCGACAATTGAAAAGGTTAGCAATCACATACCTGATGACTTCAAATTCTCCATTCTTTCAAAACTTCCTCTTAAATCTTTGGTTCGATTTAGATGCGTACGTAAATCATGGTCTCTTTTATTCAAAAACCTTTATTTCATGAACATGTACCGCAACAATTTCATATCCAATAATAATTTTTCTTACGTCGATCATTCATGTCTCACATTAGACTTAGAGGAGCCAACCTACGAACTCCATGATGCCTTGTTTTCGCATTCTGGTGAGAGGCTTGAGAATAAAGTAAAATTAGATTGGCCACCTCCGTTTGACGAGGATGACCAAGGTATTAGAATGTTGGGTTATACTGCCGCAAATGACACTCTTTGTTTATACCAAGGTTTTAAAATTCCAAAAGTTGTATTTTGGAACCTAACTACTAAGGAATTCAAGGTCCTTCCTTCGAGTCCTCTTGAGTTCACGCCACCATCTTATGAAACTGTTTTTATTAGCCATCATGGATTTGGTTATGATCCTATTAGTGATGACCATAAGGTGATTCGACATGCAGCGCATATTCTGAGTTTTACTGACTCTGAAGGTTGTTATTTCCCACCACACGAATCCTTCTGGGAGGTATATAGCTTAAGAAGTAATTCTTGGAGAAAACTTGATGTAGATATGCCTACTGGTTATCTTACTTCAGGTTCCCGAGTGTACAAGAATGGAGTGTGTCATTGGTGGGATGAACATGAAGCTTGTTTGGTGTCATTTGACTTGAGCAGAGATGTGTTCTTTAGAACATCCCTACCCTTATATGTGGATGATGATTATGATTTTGATTTAGTTGATAGACGCTTTATGGTGTTAAATGGGTACGTTGCTTGTATCTCAACCTATGAAACAAGCTATGTAAATACACCAACTGCATTTAACGTATCACTTTTGGGTGAACTCGGTGTGAAAGAATCATGGATTAAACTTTTTGTGTATGGTCCGTTGCCTTGTATTGACCATCCTATTGGAGCAGGAAACAAAGGCGATATATTCTTTAGATCAAAAGATGATGAACTTGTTCGGTTTGATATGAGCACCCAAATGATTGAGAAGCTTGGTATCAAACATGTCCTTTATATTGAAATACTCCTTTATAAGGAAGTCCTTCTCCTGATCGGAGGACTAAAAAATGTATGA
Protein sequence

>MsG0680035275.01.T01

MIDPPTIEKVSNHIPDDFKFSILSKLPLKSLVRFRCVRKSWSLLFKNLYFMNMYRNNFISNNNFSYVDHSCLTLDLEEPTYELHDALFSHSGERLENKVKLDWPPPFDEDDQGIRMLGYTAANDTLCLYQGFKIPKVVFWNLTTKEFKVLPSSPLEFTPPSYETVFISHHGFGYDPISDDHKVIRHAAHILSFTDSEGCYFPPHESFWEVYSLRSNSWRKLDVDMPTGYLTSGSRVYKNGVCHWWDEHEACLVSFDLSRDVFFRTSLPLYVDDDYDFDLVDRRFMVLNGYVACISTYETSYVNTPTAFNVSLLGELGVKESWIKLFVYGPLPCIDHPIGAGNKGDIFFRSKDDELVRFDMSTQMIEKLGIKHVLYIEILLYKEVLLLIGGLKNV*