Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035816.01.T01 | RHN53071.1 | 79.95 | 404 | 40 | 2 | 1 | 363 | 90 | 493 | 0 | 643 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035816.01.T01 | A0A396HKS9 | 79.950 | 404 | 40 | 2 | 1 | 363 | 90 | 493 | 0.0 | 643 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035816.01.T01 | MTR_6g090180 | 79.950 | 404 | 40 | 2 | 1 | 363 | 31 | 434 | 0.0 | 642 |
MsG0680035816.01.T01 | MTR_6g086825 | 52.696 | 408 | 134 | 6 | 10 | 367 | 62 | 460 | 2.18e-130 | 381 |
MsG0680035816.01.T01 | MTR_6g079810 | 53.140 | 414 | 138 | 12 | 4 | 367 | 56 | 463 | 1.35e-125 | 369 |
MsG0680035816.01.T01 | MTR_6g079770 | 50.476 | 420 | 154 | 7 | 1 | 368 | 1 | 418 | 2.10e-123 | 362 |
MsG0680035816.01.T01 | MTR_0054s0100 | 49.148 | 411 | 164 | 5 | 1 | 368 | 1 | 409 | 2.08e-121 | 357 |
MsG0680035816.01.T01 | MTR_0134s0060 | 50.732 | 410 | 148 | 7 | 9 | 366 | 4 | 411 | 3.82e-121 | 356 |
MsG0680035816.01.T01 | MTR_0054s0090 | 49.395 | 413 | 158 | 7 | 1 | 368 | 1 | 407 | 1.02e-119 | 352 |
MsG0680035816.01.T01 | MTR_6g080680 | 51.139 | 395 | 137 | 6 | 7 | 360 | 9 | 388 | 2.72e-117 | 346 |
MsG0680035816.01.T01 | MTR_4g028510 | 50.378 | 397 | 141 | 9 | 17 | 367 | 16 | 402 | 8.33e-115 | 342 |
MsG0680035816.01.T01 | MTR_4g130330 | 50.000 | 402 | 139 | 13 | 14 | 367 | 4 | 391 | 1.91e-110 | 328 |
MsG0680035816.01.T01 | MTR_6g478230 | 46.667 | 435 | 138 | 8 | 1 | 368 | 1 | 408 | 2.53e-108 | 324 |
MsG0680035816.01.T01 | MTR_4g028680 | 47.433 | 409 | 156 | 10 | 7 | 368 | 5 | 401 | 6.13e-107 | 320 |
MsG0680035816.01.T01 | MTR_4g028660 | 45.636 | 401 | 164 | 9 | 7 | 363 | 5 | 395 | 2.37e-99 | 300 |
MsG0680035816.01.T01 | MTR_4g027450 | 45.636 | 401 | 164 | 9 | 7 | 363 | 5 | 395 | 2.37e-99 | 300 |
MsG0680035816.01.T01 | MTR_6g079790 | 53.020 | 298 | 123 | 4 | 81 | 368 | 20 | 310 | 5.09e-98 | 293 |
MsG0680035816.01.T01 | MTR_6g078010 | 49.292 | 353 | 112 | 8 | 54 | 362 | 1 | 330 | 9.41e-95 | 286 |
MsG0680035816.01.T01 | MTR_4g028750 | 46.736 | 383 | 147 | 11 | 10 | 347 | 8 | 378 | 6.34e-93 | 284 |
MsG0680035816.01.T01 | MTR_6g090250 | 43.622 | 392 | 156 | 9 | 35 | 362 | 29 | 419 | 4.11e-91 | 280 |
MsG0680035816.01.T01 | MTR_0129s0070 | 42.651 | 415 | 171 | 11 | 1 | 367 | 1 | 396 | 3.84e-89 | 274 |
MsG0680035816.01.T01 | MTR_2g021800 | 41.784 | 426 | 174 | 11 | 3 | 366 | 2 | 415 | 1.24e-88 | 273 |
MsG0680035816.01.T01 | MTR_2g022000 | 42.786 | 402 | 159 | 10 | 3 | 343 | 2 | 393 | 5.48e-88 | 272 |
MsG0680035816.01.T01 | MTR_5g097680 | 40.741 | 432 | 186 | 12 | 1 | 367 | 1 | 427 | 2.20e-87 | 270 |
MsG0680035816.01.T01 | MTR_8g063440 | 41.045 | 402 | 178 | 10 | 7 | 368 | 2 | 384 | 2.75e-86 | 266 |
MsG0680035816.01.T01 | MTR_4g102410 | 41.439 | 403 | 183 | 11 | 9 | 365 | 53 | 448 | 6.75e-86 | 267 |
MsG0680035816.01.T01 | MTR_5g097220 | 42.476 | 412 | 170 | 11 | 12 | 367 | 8 | 408 | 1.68e-85 | 265 |
MsG0680035816.01.T01 | MTR_0129s0050 | 40.625 | 416 | 187 | 9 | 5 | 368 | 2 | 409 | 3.00e-85 | 264 |
MsG0680035816.01.T01 | MTR_6g461660 | 41.707 | 410 | 178 | 11 | 1 | 363 | 1 | 396 | 9.41e-84 | 260 |
MsG0680035816.01.T01 | MTR_2g038680 | 40.758 | 422 | 171 | 14 | 7 | 366 | 6 | 410 | 1.57e-83 | 260 |
MsG0680035816.01.T01 | MTR_5g097330 | 40.723 | 415 | 175 | 12 | 8 | 368 | 7 | 404 | 1.05e-81 | 255 |
MsG0680035816.01.T01 | MTR_2g021950 | 40.049 | 412 | 174 | 12 | 4 | 363 | 3 | 393 | 1.84e-81 | 254 |
MsG0680035816.01.T01 | MTR_2g021770 | 40.482 | 415 | 178 | 13 | 11 | 368 | 6 | 408 | 8.43e-81 | 253 |
MsG0680035816.01.T01 | MTR_4g117550 | 40.000 | 410 | 166 | 12 | 1 | 367 | 1 | 373 | 2.31e-80 | 251 |
MsG0680035816.01.T01 | MTR_0129s0120 | 40.920 | 413 | 179 | 11 | 1 | 366 | 1 | 395 | 9.59e-80 | 250 |
MsG0680035816.01.T01 | MTR_6g087620 | 50.174 | 287 | 101 | 5 | 77 | 356 | 27 | 278 | 6.11e-79 | 244 |
MsG0680035816.01.T01 | MTR_5g096630 | 39.320 | 412 | 190 | 9 | 10 | 368 | 11 | 415 | 1.29e-78 | 247 |
MsG0680035816.01.T01 | MTR_7g069550 | 40.964 | 415 | 170 | 15 | 6 | 367 | 3 | 395 | 3.51e-77 | 243 |
MsG0680035816.01.T01 | MTR_5g037680 | 38.916 | 406 | 162 | 9 | 12 | 360 | 3 | 379 | 5.22e-77 | 244 |
MsG0680035816.01.T01 | MTR_8g064890 | 40.247 | 405 | 179 | 12 | 7 | 368 | 5 | 389 | 1.79e-74 | 236 |
MsG0680035816.01.T01 | MTR_7g017130 | 37.440 | 414 | 197 | 11 | 1 | 368 | 1 | 398 | 1.07e-73 | 234 |
MsG0680035816.01.T01 | MTR_6g090260 | 63.102 | 187 | 65 | 3 | 180 | 362 | 73 | 259 | 1.17e-73 | 229 |
MsG0680035816.01.T01 | MTR_6g090260 | 66.154 | 65 | 21 | 1 | 3 | 66 | 5 | 69 | 8.41e-18 | 82.8 |
MsG0680035816.01.T01 | MTR_1g007450 | 40.665 | 391 | 174 | 12 | 9 | 353 | 4 | 382 | 1.28e-73 | 235 |
MsG0680035816.01.T01 | MTR_0831s0010 | 37.831 | 415 | 183 | 15 | 1 | 366 | 32 | 420 | 2.04e-73 | 234 |
MsG0680035816.01.T01 | MTR_1g007410 | 41.191 | 403 | 167 | 15 | 9 | 359 | 14 | 398 | 3.37e-73 | 233 |
MsG0680035816.01.T01 | MTR_2g034700 | 41.162 | 396 | 158 | 13 | 9 | 360 | 5 | 369 | 4.43e-73 | 232 |
MsG0680035816.01.T01 | MTR_7g023800 | 46.713 | 289 | 105 | 5 | 77 | 360 | 60 | 304 | 8.72e-73 | 229 |
MsG0680035816.01.T01 | MTR_5g069390 | 35.714 | 420 | 199 | 8 | 2 | 365 | 11 | 415 | 9.65e-73 | 234 |
MsG0680035816.01.T01 | MTR_3g011120 | 39.031 | 392 | 165 | 12 | 11 | 357 | 8 | 370 | 1.92e-72 | 230 |
MsG0680035816.01.T01 | MTR_5g092850 | 40.554 | 397 | 174 | 11 | 16 | 363 | 15 | 398 | 2.92e-72 | 231 |
MsG0680035816.01.T01 | MTR_4g055820 | 41.047 | 363 | 153 | 7 | 11 | 323 | 8 | 359 | 1.61e-71 | 227 |
MsG0680035816.01.T01 | MTR_2g104340 | 39.951 | 408 | 185 | 9 | 6 | 367 | 3 | 396 | 7.26e-71 | 227 |
MsG0680035816.01.T01 | MTR_7g017170 | 36.620 | 426 | 196 | 12 | 1 | 368 | 1 | 410 | 3.31e-70 | 226 |
MsG0680035816.01.T01 | MTR_7g104710 | 44.037 | 327 | 97 | 6 | 1 | 282 | 1 | 286 | 3.07e-69 | 220 |
MsG0680035816.01.T01 | MTR_2g066170 | 37.469 | 403 | 186 | 12 | 9 | 366 | 4 | 385 | 4.02e-69 | 222 |
MsG0680035816.01.T01 | MTR_5g096910 | 38.443 | 411 | 173 | 12 | 9 | 366 | 9 | 392 | 6.93e-69 | 222 |
MsG0680035816.01.T01 | MTR_5g092860 | 41.716 | 338 | 160 | 9 | 35 | 343 | 20 | 349 | 7.64e-69 | 221 |
MsG0680035816.01.T01 | MTR_8g012090 | 40.437 | 366 | 135 | 8 | 12 | 336 | 11 | 334 | 1.41e-68 | 219 |
MsG0680035816.01.T01 | MTR_5g074850 | 41.969 | 386 | 166 | 16 | 7 | 343 | 24 | 400 | 1.99e-68 | 231 |
MsG0680035816.01.T01 | MTR_2g065860 | 36.790 | 405 | 196 | 9 | 7 | 368 | 2 | 389 | 3.47e-68 | 219 |
MsG0680035816.01.T01 | MTR_7g017040 | 37.805 | 410 | 189 | 10 | 8 | 368 | 7 | 399 | 4.44e-68 | 220 |
MsG0680035816.01.T01 | MTR_8g033140 | 36.364 | 440 | 177 | 16 | 3 | 368 | 9 | 419 | 8.94e-68 | 219 |
MsG0680035816.01.T01 | MTR_2g065840 | 36.700 | 406 | 192 | 11 | 7 | 366 | 2 | 388 | 2.53e-67 | 218 |
MsG0680035816.01.T01 | MTR_8g464770 | 37.755 | 392 | 176 | 12 | 12 | 360 | 7 | 373 | 3.56e-67 | 217 |
MsG0680035816.01.T01 | MTR_2g066200 | 37.073 | 410 | 188 | 12 | 7 | 368 | 2 | 389 | 5.04e-67 | 217 |
MsG0680035816.01.T01 | MTR_5g024260 | 39.589 | 389 | 163 | 14 | 14 | 349 | 19 | 388 | 5.95e-67 | 217 |
MsG0680035816.01.T01 | MTR_4g014370 | 34.928 | 418 | 196 | 11 | 11 | 366 | 5 | 408 | 1.42e-66 | 216 |
MsG0680035816.01.T01 | MTR_8g041270 | 38.095 | 420 | 185 | 10 | 6 | 367 | 4 | 406 | 1.98e-66 | 216 |
MsG0680035816.01.T01 | MTR_2g064950 | 39.637 | 386 | 153 | 12 | 11 | 341 | 4 | 364 | 3.14e-66 | 215 |
MsG0680035816.01.T01 | MTR_8g467670 | 36.750 | 400 | 174 | 11 | 16 | 368 | 13 | 380 | 1.10e-65 | 213 |
MsG0680035816.01.T01 | MTR_5g064700 | 38.147 | 367 | 196 | 14 | 19 | 367 | 15 | 368 | 1.62e-65 | 212 |
MsG0680035816.01.T01 | MTR_8g033090 | 37.292 | 421 | 178 | 13 | 14 | 367 | 11 | 412 | 1.72e-65 | 213 |
MsG0680035816.01.T01 | MTR_5g076490 | 45.190 | 343 | 152 | 16 | 54 | 367 | 1 | 336 | 1.87e-65 | 211 |
MsG0680035816.01.T01 | MTR_2g104280 | 37.897 | 409 | 189 | 11 | 12 | 367 | 9 | 405 | 7.58e-65 | 211 |
MsG0680035816.01.T01 | MTR_5g072060 | 40.426 | 376 | 144 | 13 | 15 | 342 | 4 | 347 | 1.70e-64 | 216 |
MsG0680035816.01.T01 | MTR_8g046310 | 35.697 | 409 | 172 | 14 | 7 | 362 | 3 | 373 | 8.31e-64 | 208 |
MsG0680035816.01.T01 | MTR_5g075370 | 39.844 | 384 | 165 | 15 | 14 | 343 | 5 | 376 | 1.51e-63 | 216 |
MsG0680035816.01.T01 | MTR_4g014370 | 35.467 | 375 | 189 | 8 | 1 | 366 | 6 | 336 | 6.01e-63 | 204 |
MsG0680035816.01.T01 | MTR_8g039500 | 37.978 | 366 | 166 | 11 | 9 | 336 | 4 | 346 | 8.63e-63 | 204 |
MsG0680035816.01.T01 | MTR_2g066150 | 37.157 | 401 | 168 | 15 | 9 | 368 | 4 | 361 | 3.23e-62 | 203 |
MsG0680035816.01.T01 | MTR_5g022850 | 39.024 | 369 | 188 | 13 | 12 | 368 | 11 | 354 | 2.87e-61 | 201 |
MsG0680035816.01.T01 | MTR_7g079640 | 38.243 | 387 | 157 | 12 | 6 | 345 | 3 | 354 | 1.03e-60 | 200 |
MsG0680035816.01.T01 | MTR_1g098180 | 36.224 | 392 | 184 | 12 | 7 | 364 | 4 | 363 | 7.80e-60 | 197 |
MsG0680035816.01.T01 | MTR_5g043605 | 38.992 | 377 | 172 | 14 | 3 | 366 | 7 | 338 | 1.00e-59 | 197 |
MsG0680035816.01.T01 | MTR_5g097350 | 37.726 | 387 | 164 | 11 | 26 | 363 | 25 | 383 | 1.93e-59 | 197 |
MsG0680035816.01.T01 | MTR_8g013000 | 39.071 | 366 | 156 | 11 | 11 | 325 | 4 | 353 | 1.06e-58 | 196 |
MsG0680035816.01.T01 | MTR_8g018110 | 35.167 | 418 | 191 | 11 | 7 | 367 | 3 | 397 | 2.04e-58 | 194 |
MsG0680035816.01.T01 | MTR_8g064790 | 35.427 | 398 | 157 | 12 | 7 | 368 | 5 | 338 | 3.58e-58 | 192 |
MsG0680035816.01.T01 | MTR_1g053510 | 36.211 | 417 | 186 | 13 | 7 | 362 | 4 | 401 | 4.13e-58 | 194 |
MsG0680035816.01.T01 | MTR_8g046200 | 34.346 | 428 | 175 | 13 | 16 | 362 | 15 | 417 | 2.33e-57 | 192 |
MsG0680035816.01.T01 | MTR_5g074800 | 40.650 | 369 | 164 | 19 | 16 | 366 | 8 | 339 | 3.53e-57 | 190 |
MsG0680035816.01.T01 | MTR_5g091140 | 38.860 | 386 | 162 | 15 | 2 | 341 | 33 | 390 | 7.66e-57 | 191 |
MsG0680035816.01.T01 | MTR_8g033110 | 36.038 | 419 | 189 | 13 | 14 | 367 | 11 | 415 | 1.36e-56 | 190 |
MsG0680035816.01.T01 | MTR_6g079730 | 67.164 | 134 | 44 | 0 | 229 | 362 | 12 | 145 | 4.36e-56 | 181 |
MsG0680035816.01.T01 | MTR_1g007430 | 38.053 | 339 | 150 | 8 | 27 | 325 | 6 | 324 | 2.16e-55 | 184 |
MsG0680035816.01.T01 | MTR_7g111700 | 35.294 | 408 | 178 | 9 | 4 | 368 | 2 | 366 | 2.37e-55 | 186 |
MsG0680035816.01.T01 | MTR_8g046220 | 32.710 | 428 | 197 | 12 | 1 | 363 | 1 | 402 | 3.64e-55 | 186 |
MsG0680035816.01.T01 | MTR_4g007940 | 39.286 | 280 | 135 | 8 | 102 | 364 | 78 | 339 | 8.31e-55 | 184 |
MsG0680035816.01.T01 | MTR_8g063330 | 37.017 | 362 | 163 | 15 | 9 | 322 | 4 | 348 | 8.54e-55 | 187 |
MsG0680035816.01.T01 | MTR_6g070880 | 44.490 | 245 | 87 | 6 | 1 | 199 | 15 | 256 | 3.07e-53 | 177 |
MsG0680035816.01.T01 | MTR_6g071420 | 44.490 | 245 | 87 | 6 | 1 | 199 | 15 | 256 | 3.07e-53 | 177 |
MsG0680035816.01.T01 | MTR_5g059430 | 39.731 | 297 | 158 | 8 | 77 | 367 | 145 | 426 | 3.37e-53 | 182 |
MsG0680035816.01.T01 | MTR_5g059430 | 50.725 | 69 | 34 | 0 | 11 | 79 | 20 | 88 | 1.08e-15 | 78.6 |
MsG0680035816.01.T01 | MTR_2g021920 | 43.750 | 240 | 113 | 7 | 139 | 363 | 37 | 269 | 7.47e-53 | 176 |
MsG0680035816.01.T01 | MTR_8g032980 | 34.028 | 432 | 196 | 14 | 3 | 364 | 6 | 418 | 1.40e-52 | 180 |
MsG0680035816.01.T01 | MTR_1g050308 | 34.559 | 408 | 144 | 12 | 4 | 368 | 21 | 348 | 4.05e-52 | 177 |
MsG0680035816.01.T01 | MTR_7g016930 | 38.462 | 338 | 170 | 10 | 10 | 325 | 9 | 330 | 1.11e-51 | 175 |
MsG0680035816.01.T01 | MTR_8g036970 | 37.910 | 335 | 164 | 12 | 21 | 345 | 2 | 302 | 1.97e-50 | 173 |
MsG0680035816.01.T01 | MTR_6g004450 | 42.553 | 235 | 115 | 6 | 138 | 366 | 48 | 268 | 3.38e-49 | 167 |
MsG0680035816.01.T01 | MTR_8g063370 | 33.687 | 377 | 189 | 10 | 21 | 358 | 28 | 382 | 3.79e-49 | 170 |
MsG0680035816.01.T01 | MTR_8g063350 | 36.390 | 349 | 171 | 13 | 9 | 341 | 6 | 319 | 4.61e-49 | 169 |
MsG0680035816.01.T01 | MTR_5g086590 | 42.259 | 239 | 118 | 6 | 101 | 339 | 13 | 231 | 8.10e-49 | 165 |
MsG0680035816.01.T01 | MTR_5g023970 | 46.875 | 192 | 100 | 2 | 178 | 368 | 7 | 197 | 6.92e-48 | 161 |
MsG0680035816.01.T01 | MTR_3g018750 | 42.915 | 247 | 117 | 9 | 138 | 367 | 2 | 241 | 1.02e-47 | 162 |
MsG0680035816.01.T01 | MTR_5g096900 | 38.507 | 335 | 126 | 12 | 10 | 290 | 5 | 313 | 1.22e-46 | 162 |
MsG0680035816.01.T01 | MTR_5g097850 | 46.561 | 189 | 89 | 4 | 187 | 368 | 63 | 246 | 5.69e-46 | 158 |
MsG0680035816.01.T01 | MTR_6g465360 | 41.909 | 241 | 82 | 8 | 2 | 190 | 47 | 281 | 1.95e-43 | 152 |
MsG0680035816.01.T01 | MTR_5g094350 | 39.259 | 270 | 132 | 10 | 13 | 252 | 9 | 276 | 3.76e-43 | 151 |
MsG0680035816.01.T01 | MTR_5g068490 | 36.426 | 291 | 147 | 8 | 78 | 368 | 26 | 278 | 1.48e-42 | 150 |
MsG0680035816.01.T01 | MTR_4g016000 | 40.541 | 222 | 95 | 7 | 106 | 320 | 2 | 193 | 1.90e-40 | 142 |
MsG0680035816.01.T01 | MTR_1g050312 | 38.434 | 281 | 120 | 10 | 86 | 359 | 53 | 287 | 3.06e-40 | 144 |
MsG0680035816.01.T01 | MTR_8g033000 | 33.526 | 346 | 191 | 11 | 48 | 367 | 31 | 363 | 1.34e-39 | 144 |
MsG0680035816.01.T01 | MTR_6g009350 | 42.289 | 201 | 94 | 7 | 139 | 330 | 8 | 195 | 2.72e-39 | 139 |
MsG0680035816.01.T01 | MTR_5g066420 | 47.368 | 152 | 69 | 3 | 213 | 356 | 1 | 149 | 4.12e-39 | 136 |
MsG0680035816.01.T01 | MTR_8g063310 | 29.095 | 409 | 212 | 15 | 1 | 359 | 9 | 389 | 2.43e-38 | 142 |
MsG0680035816.01.T01 | MTR_7g019250 | 38.235 | 238 | 107 | 10 | 115 | 343 | 206 | 412 | 1.55e-36 | 138 |
MsG0680035816.01.T01 | MTR_3g030620 | 43.713 | 167 | 87 | 4 | 205 | 365 | 15 | 180 | 1.85e-36 | 130 |
MsG0680035816.01.T01 | MTR_8g035690 | 33.432 | 338 | 162 | 14 | 56 | 366 | 1 | 302 | 3.36e-36 | 134 |
MsG0680035816.01.T01 | MTR_5g097820 | 34.875 | 281 | 109 | 8 | 8 | 235 | 10 | 269 | 4.35e-35 | 130 |
MsG0680035816.01.T01 | MTR_5g096920 | 44.805 | 154 | 80 | 3 | 213 | 365 | 1 | 150 | 3.13e-34 | 124 |
MsG0680035816.01.T01 | MTR_1g115205 | 39.095 | 243 | 106 | 9 | 1 | 222 | 17 | 238 | 1.82e-32 | 122 |
MsG0680035816.01.T01 | MTR_7g017120 | 39.706 | 204 | 113 | 6 | 171 | 368 | 68 | 267 | 9.60e-32 | 120 |
MsG0680035816.01.T01 | MTR_7g017150 | 40.196 | 204 | 111 | 6 | 171 | 367 | 68 | 267 | 9.72e-32 | 120 |
MsG0680035816.01.T01 | MTR_4g094400 | 60.000 | 105 | 28 | 2 | 210 | 300 | 7 | 111 | 1.52e-31 | 116 |
MsG0680035816.01.T01 | MTR_5g097660 | 47.368 | 114 | 59 | 1 | 251 | 363 | 3 | 116 | 2.20e-29 | 110 |
MsG0680035816.01.T01 | MTR_1g076810 | 29.538 | 325 | 146 | 11 | 7 | 286 | 8 | 294 | 1.35e-28 | 117 |
MsG0680035816.01.T01 | MTR_5g098950 | 35.102 | 245 | 110 | 7 | 92 | 325 | 68 | 274 | 1.62e-28 | 112 |
MsG0680035816.01.T01 | MTR_3g019290 | 40.761 | 184 | 86 | 6 | 14 | 189 | 11 | 179 | 2.18e-28 | 109 |
MsG0680035816.01.T01 | MTR_4g116330 | 27.778 | 396 | 219 | 12 | 4 | 365 | 13 | 375 | 9.04e-28 | 112 |
MsG0680035816.01.T01 | MTR_2g022020 | 45.763 | 118 | 62 | 2 | 246 | 363 | 1 | 116 | 1.24e-27 | 105 |
MsG0680035816.01.T01 | MTR_7g101200 | 30.132 | 302 | 137 | 10 | 31 | 328 | 1 | 232 | 4.92e-27 | 107 |
MsG0680035816.01.T01 | MTR_5g097540 | 42.069 | 145 | 75 | 4 | 182 | 325 | 97 | 233 | 1.69e-26 | 107 |
MsG0680035816.01.T01 | MTR_4g133170 | 25.852 | 352 | 209 | 12 | 17 | 339 | 4 | 332 | 2.75e-25 | 105 |
MsG0680035816.01.T01 | MTR_2g104260 | 33.103 | 290 | 123 | 7 | 6 | 241 | 3 | 275 | 1.33e-23 | 99.4 |
MsG0680035816.01.T01 | MTR_4g094365 | 25.641 | 390 | 225 | 11 | 11 | 365 | 2 | 361 | 1.35e-23 | 100 |
MsG0680035816.01.T01 | MTR_5g036250 | 49.485 | 97 | 48 | 1 | 263 | 359 | 8 | 103 | 3.76e-23 | 95.5 |
MsG0680035816.01.T01 | MTR_1g047080 | 29.598 | 348 | 146 | 15 | 54 | 367 | 1 | 283 | 1.00e-22 | 97.1 |
MsG0680035816.01.T01 | MTR_4g021785 | 26.053 | 380 | 214 | 13 | 16 | 365 | 8 | 350 | 1.19e-22 | 97.8 |
MsG0680035816.01.T01 | MTR_4g109270 | 26.684 | 386 | 212 | 12 | 17 | 365 | 8 | 359 | 2.92e-22 | 97.1 |
MsG0680035816.01.T01 | MTR_2g028130 | 24.938 | 401 | 213 | 17 | 13 | 350 | 1 | 376 | 1.12e-21 | 95.9 |
MsG0680035816.01.T01 | MTR_4g023130 | 27.852 | 298 | 157 | 9 | 10 | 303 | 2 | 245 | 1.48e-21 | 94.4 |
MsG0680035816.01.T01 | MTR_5g086780 | 45.283 | 106 | 58 | 0 | 238 | 343 | 123 | 228 | 2.41e-21 | 92.0 |
MsG0680035816.01.T01 | MTR_5g086780 | 37.333 | 150 | 53 | 3 | 9 | 158 | 8 | 116 | 6.30e-15 | 73.9 |
MsG0680035816.01.T01 | MTR_1g068835 | 24.646 | 353 | 214 | 13 | 17 | 339 | 4 | 334 | 2.71e-21 | 94.4 |
MsG0680035816.01.T01 | MTR_0667s0010 | 25.798 | 376 | 209 | 15 | 13 | 339 | 2 | 356 | 2.79e-21 | 94.7 |
MsG0680035816.01.T01 | MTR_2g024110 | 23.497 | 366 | 210 | 14 | 17 | 339 | 4 | 342 | 1.11e-20 | 92.8 |
MsG0680035816.01.T01 | MTR_2g026010 | 26.855 | 283 | 171 | 11 | 79 | 346 | 86 | 347 | 1.69e-20 | 92.4 |
MsG0680035816.01.T01 | MTR_5g037190 | 29.032 | 279 | 122 | 8 | 4 | 237 | 3 | 250 | 2.51e-20 | 89.4 |
MsG0680035816.01.T01 | MTR_2g028140 | 24.211 | 380 | 219 | 14 | 13 | 339 | 1 | 364 | 2.52e-20 | 92.0 |
MsG0680035816.01.T01 | MTR_2g426060 | 25.737 | 373 | 204 | 16 | 17 | 339 | 6 | 355 | 3.73e-20 | 91.7 |
MsG0680035816.01.T01 | MTR_1g068860 | 25.000 | 360 | 220 | 11 | 17 | 346 | 4 | 343 | 4.00e-20 | 90.9 |
MsG0680035816.01.T01 | MTR_4g023080 | 24.615 | 390 | 216 | 11 | 11 | 365 | 3 | 349 | 6.37e-20 | 90.1 |
MsG0680035816.01.T01 | MTR_4g070550 | 23.797 | 374 | 223 | 13 | 13 | 339 | 1 | 359 | 1.58e-19 | 89.7 |
MsG0680035816.01.T01 | MTR_4g117850 | 25.773 | 388 | 214 | 16 | 16 | 364 | 22 | 374 | 3.71e-19 | 88.2 |
MsG0680035816.01.T01 | MTR_1g068875 | 24.217 | 351 | 217 | 14 | 17 | 339 | 4 | 333 | 1.08e-18 | 87.0 |
MsG0680035816.01.T01 | MTR_8g041440 | 57.353 | 68 | 29 | 0 | 9 | 76 | 7 | 74 | 1.12e-18 | 81.3 |
MsG0680035816.01.T01 | MTR_3g034130 | 25.532 | 376 | 208 | 13 | 12 | 344 | 4 | 350 | 5.59e-18 | 84.7 |
MsG0680035816.01.T01 | MTR_3g083010 | 25.381 | 394 | 209 | 18 | 17 | 346 | 6 | 378 | 8.58e-18 | 84.7 |
MsG0680035816.01.T01 | MTR_8g013010 | 27.451 | 306 | 153 | 10 | 3 | 272 | 37 | 309 | 1.00e-17 | 83.2 |
MsG0680035816.01.T01 | MTR_5g096050 | 44.954 | 109 | 49 | 2 | 213 | 310 | 1 | 109 | 1.38e-17 | 78.6 |
MsG0680035816.01.T01 | MTR_1g097330 | 28.440 | 327 | 162 | 15 | 10 | 302 | 9 | 297 | 1.77e-17 | 83.6 |
MsG0680035816.01.T01 | MTR_3g047580 | 41.129 | 124 | 49 | 4 | 3 | 109 | 5 | 121 | 4.31e-17 | 77.4 |
MsG0680035816.01.T01 | MTR_6g087660 | 52.809 | 89 | 39 | 2 | 1 | 86 | 1 | 89 | 5.00e-17 | 79.0 |
MsG0680035816.01.T01 | MTR_4g023090 | 26.048 | 334 | 175 | 10 | 8 | 303 | 4 | 303 | 6.18e-17 | 81.6 |
MsG0680035816.01.T01 | MTR_5g070080 | 24.079 | 407 | 223 | 13 | 16 | 368 | 9 | 383 | 7.38e-17 | 81.6 |
MsG0680035816.01.T01 | MTR_5g097650 | 37.415 | 147 | 56 | 3 | 9 | 122 | 10 | 153 | 1.07e-16 | 77.0 |
MsG0680035816.01.T01 | MTR_2g425980 | 25.067 | 371 | 210 | 16 | 17 | 339 | 5 | 355 | 1.81e-16 | 80.5 |
MsG0680035816.01.T01 | MTR_2g031680 | 25.479 | 365 | 217 | 15 | 13 | 346 | 2 | 342 | 2.08e-16 | 80.1 |
MsG0680035816.01.T01 | MTR_1g055135 | 26.685 | 356 | 190 | 17 | 16 | 328 | 12 | 339 | 2.11e-16 | 80.1 |
MsG0680035816.01.T01 | MTR_3g103020 | 23.136 | 389 | 226 | 9 | 16 | 365 | 19 | 373 | 5.84e-16 | 79.0 |
MsG0680035816.01.T01 | MTR_8g102520 | 26.493 | 268 | 162 | 10 | 104 | 363 | 75 | 315 | 6.65e-16 | 78.2 |
MsG0680035816.01.T01 | MTR_5g096070 | 40.164 | 122 | 55 | 3 | 11 | 118 | 20 | 137 | 6.75e-16 | 74.7 |
MsG0680035816.01.T01 | MTR_5g097210 | 24.084 | 382 | 223 | 12 | 16 | 363 | 8 | 356 | 1.96e-15 | 77.4 |
MsG0680035816.01.T01 | MTR_8g073570 | 32.418 | 182 | 70 | 6 | 9 | 150 | 2 | 170 | 5.16e-15 | 72.8 |
MsG0680035816.01.T01 | MTR_4g109280 | 24.457 | 368 | 198 | 11 | 15 | 344 | 6 | 331 | 6.62e-15 | 75.5 |
MsG0680035816.01.T01 | MTR_5g091150 | 32.161 | 199 | 81 | 7 | 77 | 273 | 38 | 184 | 7.22e-15 | 73.2 |
MsG0680035816.01.T01 | MTR_2g024100 | 24.791 | 359 | 215 | 16 | 33 | 366 | 51 | 379 | 1.16e-14 | 75.1 |
MsG0680035816.01.T01 | MTR_2g426020 | 23.467 | 375 | 210 | 13 | 17 | 339 | 6 | 355 | 1.30e-14 | 75.1 |
MsG0680035816.01.T01 | MTR_1g097560 | 26.221 | 389 | 207 | 19 | 9 | 361 | 28 | 372 | 2.29e-14 | 73.9 |
MsG0680035816.01.T01 | MTR_2g021050 | 23.035 | 369 | 196 | 15 | 17 | 340 | 5 | 330 | 3.90e-14 | 73.6 |
MsG0680035816.01.T01 | MTR_1g050305 | 49.398 | 83 | 37 | 2 | 268 | 345 | 21 | 103 | 5.74e-14 | 68.9 |
MsG0680035816.01.T01 | MTR_3g036430 | 26.176 | 340 | 181 | 17 | 17 | 338 | 20 | 307 | 5.97e-14 | 72.4 |
MsG0680035816.01.T01 | MTR_3g006670 | 26.667 | 330 | 171 | 14 | 17 | 311 | 49 | 342 | 5.99e-14 | 73.2 |
MsG0680035816.01.T01 | MTR_4g117780 | 24.074 | 378 | 232 | 12 | 17 | 365 | 11 | 362 | 6.65e-14 | 72.8 |
MsG0680035816.01.T01 | MTR_6g060650 | 24.121 | 398 | 224 | 12 | 11 | 363 | 2 | 366 | 7.00e-14 | 72.8 |
MsG0680035816.01.T01 | MTR_8g101580 | 26.140 | 329 | 178 | 13 | 6 | 302 | 35 | 330 | 8.13e-14 | 72.4 |
MsG0680035816.01.T01 | MTR_2g426090 | 25.203 | 369 | 217 | 17 | 20 | 346 | 9 | 360 | 1.06e-13 | 72.4 |
MsG0680035816.01.T01 | MTR_8g032390 | 26.599 | 297 | 187 | 8 | 12 | 302 | 35 | 306 | 1.07e-13 | 72.0 |
MsG0680035816.01.T01 | MTR_4g117770 | 24.093 | 386 | 224 | 13 | 16 | 365 | 10 | 362 | 2.01e-13 | 71.2 |
MsG0680035816.01.T01 | MTR_4g117810 | 24.093 | 386 | 224 | 13 | 16 | 365 | 10 | 362 | 2.01e-13 | 71.2 |
MsG0680035816.01.T01 | MTR_5g070088 | 23.153 | 406 | 233 | 13 | 12 | 365 | 2 | 380 | 2.37e-13 | 71.2 |
MsG0680035816.01.T01 | MTR_5g070130 | 22.794 | 408 | 221 | 14 | 9 | 363 | 3 | 369 | 4.29e-13 | 70.5 |
MsG0680035816.01.T01 | MTR_3g047540 | 45.977 | 87 | 38 | 4 | 181 | 266 | 5 | 83 | 4.93e-13 | 64.7 |
MsG0680035816.01.T01 | MTR_4g118380 | 25.199 | 377 | 194 | 11 | 11 | 328 | 2 | 349 | 1.25e-12 | 68.6 |
MsG0680035816.01.T01 | MTR_3g097190 | 50.000 | 54 | 27 | 0 | 287 | 340 | 28 | 81 | 2.62e-12 | 65.1 |
MsG0680035816.01.T01 | MTR_8g090195 | 55.357 | 56 | 25 | 0 | 286 | 341 | 58 | 113 | 3.26e-12 | 63.2 |
MsG0680035816.01.T01 | MTR_2g021150 | 24.383 | 324 | 176 | 12 | 16 | 302 | 13 | 304 | 1.98e-11 | 65.1 |
MsG0680035816.01.T01 | MTR_8g040935 | 27.830 | 212 | 120 | 9 | 175 | 365 | 4 | 203 | 2.10e-11 | 63.2 |
MsG0680035816.01.T01 | MTR_3g007360 | 25.633 | 316 | 162 | 14 | 25 | 303 | 60 | 339 | 2.99e-11 | 64.7 |
MsG0680035816.01.T01 | MTR_1g055165 | 24.786 | 351 | 213 | 14 | 16 | 363 | 9 | 311 | 6.12e-11 | 63.2 |
MsG0680035816.01.T01 | MTR_3g007410 | 25.633 | 316 | 162 | 14 | 25 | 303 | 60 | 339 | 9.58e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 78 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGTTGTTTCTTGTCTTCA+TGG | 0.149359 | 6:-112719296 | MsG0680035816.01.T01:CDS |
TGGACAAAACTCTTCGTTAT+TGG | 0.201593 | 6:-112718807 | MsG0680035816.01.T01:CDS |
GGATTGAATAGATTGGTAAT+TGG | 0.247123 | 6:+112719374 | None:intergenic |
CTTAAGTCTTTAAAGCGATT+TGG | 0.255130 | 6:-112719673 | MsG0680035816.01.T01:CDS |
ATAAACTTGGCGGTGTTAAA+TGG | 0.269252 | 6:-112718912 | MsG0680035816.01.T01:CDS |
AAGCAAGCTCCTCAATTGTT+TGG | 0.284839 | 6:+112718685 | None:intergenic |
CCCTTTGTCCCCATTCCAAT+GGG | 0.297002 | 6:+112718762 | None:intergenic |
ATGGAGAATAAGAAGAAATC+TGG | 0.301478 | 6:-112719763 | MsG0680035816.01.T01:CDS |
GATTGAATAGATTGGTAATT+GGG | 0.345980 | 6:+112719375 | None:intergenic |
CCCCTTTGTCCCCATTCCAA+TGG | 0.352708 | 6:+112718761 | None:intergenic |
AATCGCTTTAAAGACTTAAG+AGG | 0.373019 | 6:+112719676 | None:intergenic |
TAAGCTATATATCTCCCATA+TGG | 0.383589 | 6:+112719154 | None:intergenic |
ACATGGATGGGTTCTGTCAT+TGG | 0.383720 | 6:-112719058 | MsG0680035816.01.T01:CDS |
AGCAAGCTCCTCAATTGTTT+GGG | 0.390875 | 6:+112718686 | None:intergenic |
CCGTGGTACATGTGACTATA+AGG | 0.408263 | 6:-112719261 | MsG0680035816.01.T01:CDS |
AAAATATCCTTAGCAGTGTC+TGG | 0.417601 | 6:+112719320 | None:intergenic |
CCCATTGGAATGGGGACAAA+GGG | 0.419749 | 6:-112718762 | MsG0680035816.01.T01:CDS |
ATAGCTTAAGAAGTAATTCA+TGG | 0.421433 | 6:-112719139 | MsG0680035816.01.T01:CDS |
GTTAAGTACCCCATTGGAAT+GGG | 0.426020 | 6:-112718771 | MsG0680035816.01.T01:CDS |
TAAACTTGGCGGTGTTAAAT+GGG | 0.436633 | 6:-112718911 | MsG0680035816.01.T01:CDS |
GTGCCTTCCAAAGTTGTACT+TGG | 0.446814 | 6:-112719194 | MsG0680035816.01.T01:CDS |
ATGCACCTTTAGACCCCATA+TGG | 0.446873 | 6:-112719169 | MsG0680035816.01.T01:CDS |
TGCATCTCCAAGTACAACTT+TGG | 0.456994 | 6:+112719187 | None:intergenic |
CTCAACCGGACTGGGAGGAA+TGG | 0.462772 | 6:+112719352 | None:intergenic |
ATCTCCCATATGGGGTCTAA+AGG | 0.465292 | 6:+112719164 | None:intergenic |
CGAGGGCATCCAAGCGTACA+TGG | 0.466814 | 6:-112719075 | MsG0680035816.01.T01:CDS |
CGTTAAGTACCCCATTGGAA+TGG | 0.468037 | 6:-112718772 | MsG0680035816.01.T01:CDS |
TAACTACTTATTCCTCCAAT+CGG | 0.470452 | 6:+112718609 | None:intergenic |
TCAACCGGACTGGGAGGAAT+GGG | 0.470467 | 6:+112719353 | None:intergenic |
AGGAATGGGATTGAATAGAT+TGG | 0.478606 | 6:+112719367 | None:intergenic |
TAGTTTGTGTAGAATAGAAA+AGG | 0.481556 | 6:+112719699 | None:intergenic |
AAGCTATATATCTCCCATAT+GGG | 0.488133 | 6:+112719155 | None:intergenic |
AACAAAAGCATATTTCCGAT+TGG | 0.488261 | 6:-112718624 | MsG0680035816.01.T01:CDS |
TTGGATGCGTTCGTAAATCA+TGG | 0.492437 | 6:-112719654 | MsG0680035816.01.T01:CDS |
CAATCCCATTCCTCCCAGTC+CGG | 0.493764 | 6:-112719357 | MsG0680035816.01.T01:CDS |
AAGGTGCTCCGTTGTGATAA+CGG | 0.499845 | 6:+112719566 | None:intergenic |
TCTGGAAGATAAGACTCAAC+CGG | 0.505863 | 6:+112719338 | None:intergenic |
AAAAGCATATTTCCGATTGG+AGG | 0.506284 | 6:-112718621 | MsG0680035816.01.T01:CDS |
TTTGAGCACCCAAACAATTG+AGG | 0.506303 | 6:-112718694 | MsG0680035816.01.T01:CDS |
ATGTCGAATGATACCACGTT+TGG | 0.513367 | 6:-112719021 | MsG0680035816.01.T01:CDS |
GGCATCCAAGCGTACATGGA+TGG | 0.514144 | 6:-112719071 | MsG0680035816.01.T01:CDS |
AAGATAAGACTCAACCGGAC+TGG | 0.521394 | 6:+112719343 | None:intergenic |
AACTCAGCGTGAAAGAATCA+TGG | 0.522417 | 6:-112718827 | MsG0680035816.01.T01:CDS |
CCCCATTGGAATGGGGACAA+AGG | 0.533672 | 6:-112718763 | MsG0680035816.01.T01:CDS |
GGGTTATTTATATTGTGTCG+AGG | 0.536466 | 6:-112719093 | MsG0680035816.01.T01:CDS |
TGGAGAATAAGAAGAAATCT+GGG | 0.542906 | 6:-112719762 | MsG0680035816.01.T01:CDS |
GAAATCTGGGACGAATGAAA+AGG | 0.547464 | 6:-112719749 | MsG0680035816.01.T01:CDS |
GGTTATTTATATTGTGTCGA+GGG | 0.549299 | 6:-112719092 | MsG0680035816.01.T01:CDS |
AGATAAGACTCAACCGGACT+GGG | 0.550553 | 6:+112719344 | None:intergenic |
AGAACCCATCCATGTACGCT+TGG | 0.552404 | 6:+112719066 | None:intergenic |
TCATCAACGTCTGAGGGTAT+CGG | 0.554685 | 6:+112718960 | None:intergenic |
TCTTGCGTTAAGTACCCCAT+TGG | 0.554919 | 6:-112718777 | MsG0680035816.01.T01:CDS |
AAAACAATCATCAACGTCTG+AGG | 0.563980 | 6:+112718953 | None:intergenic |
AACCAATGTGGCTTAACTGT+CGG | 0.565086 | 6:-112718659 | MsG0680035816.01.T01:CDS |
CATGGCTTTGATTATGACCG+TGG | 0.569962 | 6:-112719278 | MsG0680035816.01.T01:CDS |
GCATCCAAGCGTACATGGAT+GGG | 0.571506 | 6:-112719070 | MsG0680035816.01.T01:CDS |
TAAAGCAAAGTGGATAAACT+TGG | 0.581314 | 6:-112718925 | MsG0680035816.01.T01:CDS |
ATCCGACAGTTAAGCCACAT+TGG | 0.582490 | 6:+112718657 | None:intergenic |
TGCACCTTTAGACCCCATAT+GGG | 0.582528 | 6:-112719168 | MsG0680035816.01.T01:CDS |
TTATCTTCCAGACACTGCTA+AGG | 0.586491 | 6:-112719327 | MsG0680035816.01.T01:CDS |
TCTGGTCTGGGTAGTAGCGA+TGG | 0.588636 | 6:-112719455 | MsG0680035816.01.T01:CDS |
TCTCCAAGTACAACTTTGGA+AGG | 0.589425 | 6:+112719191 | None:intergenic |
ATTCTTGCAAAATTACATTG+TGG | 0.591375 | 6:-112719400 | MsG0680035816.01.T01:CDS |
ATCATTTGACTTAAGCAATG+AGG | 0.593446 | 6:-112718997 | MsG0680035816.01.T01:CDS |
AAACAATCATCAACGTCTGA+GGG | 0.594342 | 6:+112718954 | None:intergenic |
AGCAAAGTGGATAAACTTGG+CGG | 0.608900 | 6:-112718922 | MsG0680035816.01.T01:CDS |
AGTTAGATATGAAATTGTTG+CGG | 0.639181 | 6:+112719593 | None:intergenic |
ATAGAAAAGGCAATATCATG+AGG | 0.643350 | 6:+112719712 | None:intergenic |
AGCTATATATCTCCCATATG+GGG | 0.647728 | 6:+112719156 | None:intergenic |
CATTGGAATGGGGACAAAGG+GGG | 0.648124 | 6:-112718760 | MsG0680035816.01.T01:CDS |
AACTCTCACCGTTATCACAA+CGG | 0.650907 | 6:-112719574 | MsG0680035816.01.T01:CDS |
CCTTTGTCCCCATTCCAATG+GGG | 0.659428 | 6:+112718763 | None:intergenic |
CCATTGGAATGGGGACAAAG+GGG | 0.659791 | 6:-112718761 | MsG0680035816.01.T01:CDS |
TTAAGTACCCCATTGGAATG+GGG | 0.665054 | 6:-112718770 | MsG0680035816.01.T01:CDS |
AGCTTGCTTATAAACCAATG+TGG | 0.674747 | 6:-112718671 | MsG0680035816.01.T01:CDS |
TAAGACTCAACCGGACTGGG+AGG | 0.696436 | 6:+112719347 | None:intergenic |
CCTTATAGTCACATGTACCA+CGG | 0.721804 | 6:+112719261 | None:intergenic |
AAGTCAAATGATACCAAACG+TGG | 0.727978 | 6:+112719008 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACTTCTTCAAATAGATT+TGG | + | Chr6:112718880-112718899 | None:intergenic | 20.0% |
!! | AAACTTCTTCAAATAGATTT+GGG | + | Chr6:112718879-112718898 | None:intergenic | 20.0% |
!!! | TTTAACAATTTTCAGATTTC+TGG | - | Chr6:112718898-112718917 | MsG0680035816.01.T01:CDS | 20.0% |
!!! | TTTTTCATTATATGAGAGTA+AGG | + | Chr6:112719493-112719512 | None:intergenic | 20.0% |
! | AGTTAGATATGAAATTGTTG+CGG | + | Chr6:112718781-112718800 | None:intergenic | 25.0% |
! | ATAGCTTAAGAAGTAATTCA+TGG | - | Chr6:112719232-112719251 | MsG0680035816.01.T01:CDS | 25.0% |
! | ATTCTTGCAAAATTACATTG+TGG | - | Chr6:112718971-112718990 | MsG0680035816.01.T01:CDS | 25.0% |
! | GAAAAGATAAAAAACTAGCT+TGG | - | Chr6:112719649-112719668 | MsG0680035816.01.T01:CDS | 25.0% |
!! | GATTGAATAGATTGGTAATT+GGG | + | Chr6:112718999-112719018 | None:intergenic | 25.0% |
!! | TAGTTTGTGTAGAATAGAAA+AGG | + | Chr6:112718675-112718694 | None:intergenic | 25.0% |
!!! | AAACTTAATTTTGACATGTC+GGG | - | Chr6:112719258-112719277 | MsG0680035816.01.T01:CDS | 25.0% |
!!! | GAAACTTAATTTTGACATGT+CGG | - | Chr6:112719257-112719276 | MsG0680035816.01.T01:CDS | 25.0% |
AAGCTATATATCTCCCATAT+GGG | + | Chr6:112719219-112719238 | None:intergenic | 30.0% | |
ATAGAAAAGGCAATATCATG+AGG | + | Chr6:112718662-112718681 | None:intergenic | 30.0% | |
ATGGAGAATAAGAAGAAATC+TGG | - | Chr6:112718608-112718627 | MsG0680035816.01.T01:CDS | 30.0% | |
CTTACCAGAAAAAGAATACA+AGG | + | Chr6:112718827-112718846 | None:intergenic | 30.0% | |
GGTTATTTATATTGTGTCGA+GGG | - | Chr6:112719279-112719298 | MsG0680035816.01.T01:CDS | 30.0% | |
TAAAGCAAAGTGGATAAACT+TGG | - | Chr6:112719446-112719465 | MsG0680035816.01.T01:CDS | 30.0% | |
TAACTACTTATTCCTCCAAT+CGG | + | Chr6:112719765-112719784 | None:intergenic | 30.0% | |
TAAGCTATATATCTCCCATA+TGG | + | Chr6:112719220-112719239 | None:intergenic | 30.0% | |
TGGAGAATAAGAAGAAATCT+GGG | - | Chr6:112718609-112718628 | MsG0680035816.01.T01:CDS | 30.0% | |
! | AACAAAAGCATATTTCCGAT+TGG | - | Chr6:112719747-112719766 | MsG0680035816.01.T01:CDS | 30.0% |
! | ATCATTTGACTTAAGCAATG+AGG | - | Chr6:112719374-112719393 | MsG0680035816.01.T01:CDS | 30.0% |
! | GGATTGAATAGATTGGTAAT+TGG | + | Chr6:112719000-112719019 | None:intergenic | 30.0% |
!! | AATCGCTTTAAAGACTTAAG+AGG | + | Chr6:112718698-112718717 | None:intergenic | 30.0% |
!! | ATTGTTGTTTCTTGTCTTCA+TGG | - | Chr6:112719075-112719094 | MsG0680035816.01.T01:CDS | 30.0% |
!! | CTTAAGTCTTTAAAGCGATT+TGG | - | Chr6:112718698-112718717 | MsG0680035816.01.T01:CDS | 30.0% |
!! | GTTTTGATGTTAAAGCAAAG+TGG | - | Chr6:112719436-112719455 | MsG0680035816.01.T01:CDS | 30.0% |
!! | TGTATTCTTTTTCTGGTAAG+AGG | - | Chr6:112718827-112718846 | MsG0680035816.01.T01:CDS | 30.0% |
!!! | AATTTTCAGATTTCTGGTCT+GGG | - | Chr6:112718904-112718923 | MsG0680035816.01.T01:CDS | 30.0% |
AAAACAATCATCAACGTCTG+AGG | + | Chr6:112719421-112719440 | None:intergenic | 35.0% | |
AAAATATCCTTAGCAGTGTC+TGG | + | Chr6:112719054-112719073 | None:intergenic | 35.0% | |
AAACAATCATCAACGTCTGA+GGG | + | Chr6:112719420-112719439 | None:intergenic | 35.0% | |
AAGTCAAATGATACCAAACG+TGG | + | Chr6:112719366-112719385 | None:intergenic | 35.0% | |
AGCTATATATCTCCCATATG+GGG | + | Chr6:112719218-112719237 | None:intergenic | 35.0% | |
AGGAATGGGATTGAATAGAT+TGG | + | Chr6:112719007-112719026 | None:intergenic | 35.0% | |
GGGTTATTTATATTGTGTCG+AGG | - | Chr6:112719278-112719297 | MsG0680035816.01.T01:CDS | 35.0% | |
TGGACAAAACTCTTCGTTAT+TGG | - | Chr6:112719564-112719583 | MsG0680035816.01.T01:CDS | 35.0% | |
! | AAAAGCATATTTCCGATTGG+AGG | - | Chr6:112719750-112719769 | MsG0680035816.01.T01:CDS | 35.0% |
! | AGCACCTTGTATTCTTTTTC+TGG | - | Chr6:112718820-112718839 | MsG0680035816.01.T01:CDS | 35.0% |
! | AGCTTGCTTATAAACCAATG+TGG | - | Chr6:112719700-112719719 | MsG0680035816.01.T01:CDS | 35.0% |
! | ATAAACTTGGCGGTGTTAAA+TGG | - | Chr6:112719459-112719478 | MsG0680035816.01.T01:CDS | 35.0% |
! | TAAACTTGGCGGTGTTAAAT+GGG | - | Chr6:112719460-112719479 | MsG0680035816.01.T01:CDS | 35.0% |
!!! | CAATTTTCAGATTTCTGGTC+TGG | - | Chr6:112718903-112718922 | MsG0680035816.01.T01:CDS | 35.0% |
AACCAATGTGGCTTAACTGT+CGG | - | Chr6:112719712-112719731 | MsG0680035816.01.T01:CDS | 40.0% | |
AACTCAGCGTGAAAGAATCA+TGG | - | Chr6:112719544-112719563 | MsG0680035816.01.T01:intron | 40.0% | |
AACTCTCACCGTTATCACAA+CGG | - | Chr6:112718797-112718816 | MsG0680035816.01.T01:CDS | 40.0% | |
AAGCAAGCTCCTCAATTGTT+TGG | + | Chr6:112719689-112719708 | None:intergenic | 40.0% | |
AGCAAAGTGGATAAACTTGG+CGG | - | Chr6:112719449-112719468 | MsG0680035816.01.T01:CDS | 40.0% | |
AGCAAGCTCCTCAATTGTTT+GGG | + | Chr6:112719688-112719707 | None:intergenic | 40.0% | |
ATGTCGAATGATACCACGTT+TGG | - | Chr6:112719350-112719369 | MsG0680035816.01.T01:CDS | 40.0% | |
CCTTATAGTCACATGTACCA+CGG | + | Chr6:112719113-112719132 | None:intergenic | 40.0% | |
GTTAAGTACCCCATTGGAAT+GGG | - | Chr6:112719600-112719619 | MsG0680035816.01.T01:CDS | 40.0% | |
TCTCCAAGTACAACTTTGGA+AGG | + | Chr6:112719183-112719202 | None:intergenic | 40.0% | |
TCTGGAAGATAAGACTCAAC+CGG | + | Chr6:112719036-112719055 | None:intergenic | 40.0% | |
TGCATCTCCAAGTACAACTT+TGG | + | Chr6:112719187-112719206 | None:intergenic | 40.0% | |
TTAAGTACCCCATTGGAATG+GGG | - | Chr6:112719601-112719620 | MsG0680035816.01.T01:CDS | 40.0% | |
TTATCTTCCAGACACTGCTA+AGG | - | Chr6:112719044-112719063 | MsG0680035816.01.T01:CDS | 40.0% | |
TTGGATGCGTTCGTAAATCA+TGG | - | Chr6:112718717-112718736 | MsG0680035816.01.T01:CDS | 40.0% | |
TTTGAGCACCCAAACAATTG+AGG | - | Chr6:112719677-112719696 | MsG0680035816.01.T01:CDS | 40.0% | |
! | GAAATCTGGGACGAATGAAA+AGG | - | Chr6:112718622-112718641 | MsG0680035816.01.T01:CDS | 40.0% |
AAGATAAGACTCAACCGGAC+TGG | + | Chr6:112719031-112719050 | None:intergenic | 45.0% | |
AGATAAGACTCAACCGGACT+GGG | + | Chr6:112719030-112719049 | None:intergenic | 45.0% | |
ATCCGACAGTTAAGCCACAT+TGG | + | Chr6:112719717-112719736 | None:intergenic | 45.0% | |
ATCTCCCATATGGGGTCTAA+AGG | + | Chr6:112719210-112719229 | None:intergenic | 45.0% | |
ATGCACCTTTAGACCCCATA+TGG | - | Chr6:112719202-112719221 | MsG0680035816.01.T01:CDS | 45.0% | |
CCGTGGTACATGTGACTATA+AGG | - | Chr6:112719110-112719129 | MsG0680035816.01.T01:CDS | 45.0% | |
CGTTAAGTACCCCATTGGAA+TGG | - | Chr6:112719599-112719618 | MsG0680035816.01.T01:CDS | 45.0% | |
GTGCCTTCCAAAGTTGTACT+TGG | - | Chr6:112719177-112719196 | MsG0680035816.01.T01:CDS | 45.0% | |
TCTTGCGTTAAGTACCCCAT+TGG | - | Chr6:112719594-112719613 | MsG0680035816.01.T01:CDS | 45.0% | |
TGCACCTTTAGACCCCATAT+GGG | - | Chr6:112719203-112719222 | MsG0680035816.01.T01:CDS | 45.0% | |
! | AAGGTGCTCCGTTGTGATAA+CGG | + | Chr6:112718808-112718827 | None:intergenic | 45.0% |
! | ACATGGATGGGTTCTGTCAT+TGG | - | Chr6:112719313-112719332 | MsG0680035816.01.T01:CDS | 45.0% |
! | TCATCAACGTCTGAGGGTAT+CGG | + | Chr6:112719414-112719433 | None:intergenic | 45.0% |
!! | CATGGCTTTGATTATGACCG+TGG | - | Chr6:112719093-112719112 | MsG0680035816.01.T01:CDS | 45.0% |
AGAACCCATCCATGTACGCT+TGG | + | Chr6:112719308-112719327 | None:intergenic | 50.0% | |
CATTGGAATGGGGACAAAGG+GGG | - | Chr6:112719611-112719630 | MsG0680035816.01.T01:CDS | 50.0% | |
CCATTGGAATGGGGACAAAG+GGG | - | Chr6:112719610-112719629 | MsG0680035816.01.T01:CDS | 50.0% | |
CCCATTGGAATGGGGACAAA+GGG | - | Chr6:112719609-112719628 | MsG0680035816.01.T01:CDS | 50.0% | |
CCCTTTGTCCCCATTCCAAT+GGG | + | Chr6:112719612-112719631 | None:intergenic | 50.0% | |
CCTTTGTCCCCATTCCAATG+GGG | + | Chr6:112719611-112719630 | None:intergenic | 50.0% | |
GCATCCAAGCGTACATGGAT+GGG | - | Chr6:112719301-112719320 | MsG0680035816.01.T01:CDS | 50.0% | |
CAATCCCATTCCTCCCAGTC+CGG | - | Chr6:112719014-112719033 | MsG0680035816.01.T01:CDS | 55.0% | |
CCCCATTGGAATGGGGACAA+AGG | - | Chr6:112719608-112719627 | MsG0680035816.01.T01:CDS | 55.0% | |
CCCCTTTGTCCCCATTCCAA+TGG | + | Chr6:112719613-112719632 | None:intergenic | 55.0% | |
GGCATCCAAGCGTACATGGA+TGG | - | Chr6:112719300-112719319 | MsG0680035816.01.T01:CDS | 55.0% | |
TCTGGTCTGGGTAGTAGCGA+TGG | - | Chr6:112718916-112718935 | MsG0680035816.01.T01:CDS | 55.0% | |
! | TAAGACTCAACCGGACTGGG+AGG | + | Chr6:112719027-112719046 | None:intergenic | 55.0% |
! | TCAACCGGACTGGGAGGAAT+GGG | + | Chr6:112719021-112719040 | None:intergenic | 55.0% |
! | CTCAACCGGACTGGGAGGAA+TGG | + | Chr6:112719022-112719041 | None:intergenic | 60.0% |
!! | CGAGGGCATCCAAGCGTACA+TGG | - | Chr6:112719296-112719315 | MsG0680035816.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 112718608 | 112719785 | 112718608 | ID=MsG0680035816.01;Name=MsG0680035816.01 |
Chr6 | mRNA | 112718608 | 112719785 | 112718608 | ID=MsG0680035816.01.T01;Parent=MsG0680035816.01;Name=MsG0680035816.01.T01;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|2|0|368 |
Chr6 | exon | 112719552 | 112719785 | 112719552 | ID=MsG0680035816.01.T01:exon:9672;Parent=MsG0680035816.01.T01 |
Chr6 | exon | 112718608 | 112719480 | 112718608 | ID=MsG0680035816.01.T01:exon:9671;Parent=MsG0680035816.01.T01 |
Chr6 | CDS | 112719552 | 112719785 | 112719552 | ID=MsG0680035816.01.T01:cds;Parent=MsG0680035816.01.T01 |
Chr6 | CDS | 112718608 | 112719480 | 112718608 | ID=MsG0680035816.01.T01:cds;Parent=MsG0680035816.01.T01 |
Gene Sequence |
Protein sequence |