AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030112.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030112.01.T01 MTR_5g037680 78.934 394 66 6 1 391 1 380 0.0 616
MsG0580030112.01.T01 MTR_5g069390 60.784 408 136 7 3 397 21 417 4.50e-166 475
MsG0580030112.01.T01 MTR_5g059430 59.330 418 137 8 3 398 21 427 1.61e-164 468
MsG0580030112.01.T01 MTR_5g097820 63.281 256 86 2 3 254 18 269 4.72e-115 337
MsG0580030112.01.T01 MTR_7g017170 43.269 416 200 12 1 397 11 409 1.15e-104 315
MsG0580030112.01.T01 MTR_6g086825 43.405 417 187 8 6 397 68 460 1.82e-104 317
MsG0580030112.01.T01 MTR_7g017130 42.857 413 194 11 1 397 11 397 6.46e-104 313
MsG0580030112.01.T01 MTR_5g096630 44.471 425 183 15 3 397 13 414 1.96e-102 310
MsG0580030112.01.T01 MTR_8g012090 47.911 359 130 9 3 347 11 326 4.12e-101 303
MsG0580030112.01.T01 MTR_4g102410 45.433 416 181 16 3 395 56 448 1.26e-99 303
MsG0580030112.01.T01 MTR_5g097330 44.125 417 187 13 3 397 11 403 1.44e-99 302
MsG0580030112.01.T01 MTR_0054s0090 43.160 424 181 12 2 395 11 404 2.96e-99 301
MsG0580030112.01.T01 MTR_7g017040 43.301 418 184 12 3 397 11 398 4.19e-99 301
MsG0580030112.01.T01 MTR_5g096910 45.545 404 181 12 5 395 14 391 5.78e-99 300
MsG0580030112.01.T01 MTR_2g038680 44.706 425 177 12 3 395 11 409 3.29e-98 299
MsG0580030112.01.T01 MTR_0054s0100 42.118 425 186 12 2 395 11 406 3.96e-97 296
MsG0580030112.01.T01 MTR_8g063440 43.489 407 188 14 3 397 7 383 4.04e-97 295
MsG0580030112.01.T01 MTR_2g022000 44.472 398 176 11 2 366 10 395 5.11e-97 296
MsG0580030112.01.T01 MTR_6g079770 43.088 434 182 15 2 397 11 417 1.42e-96 295
MsG0580030112.01.T01 MTR_6g080680 44.855 379 167 9 4 363 15 370 1.67e-96 294
MsG0580030112.01.T01 MTR_2g021800 44.697 396 173 11 2 363 10 393 3.18e-95 291
MsG0580030112.01.T01 MTR_5g097350 43.564 404 188 12 2 394 10 384 5.31e-95 290
MsG0580030112.01.T01 MTR_0129s0070 42.754 414 189 12 3 397 12 396 5.80e-95 290
MsG0580030112.01.T01 MTR_0134s0060 44.724 398 166 14 3 363 7 387 1.13e-94 290
MsG0580030112.01.T01 MTR_6g090180 43.198 419 186 12 3 394 42 435 1.90e-94 290
MsG0580030112.01.T01 MTR_6g079810 43.662 426 174 13 7 397 69 463 3.51e-93 288
MsG0580030112.01.T01 MTR_2g021770 41.667 432 184 16 3 397 7 407 3.30e-92 283
MsG0580030112.01.T01 MTR_4g028510 43.333 420 177 16 8 398 16 403 5.68e-92 284
MsG0580030112.01.T01 MTR_0129s0120 42.054 409 193 12 3 394 12 393 9.50e-90 276
MsG0580030112.01.T01 MTR_7g069550 45.078 386 170 14 3 364 9 376 3.37e-89 275
MsG0580030112.01.T01 MTR_4g028680 44.794 413 177 15 6 395 14 398 3.55e-89 275
MsG0580030112.01.T01 MTR_6g461660 41.587 416 193 12 3 397 14 400 4.80e-89 275
MsG0580030112.01.T01 MTR_1g007410 44.156 385 175 14 2 364 16 382 8.20e-89 274
MsG0580030112.01.T01 MTR_2g021950 42.526 388 182 12 3 368 11 379 1.19e-88 273
MsG0580030112.01.T01 MTR_5g097220 40.046 432 185 12 3 394 8 405 1.23e-88 274
MsG0580030112.01.T01 MTR_4g028660 43.257 393 180 13 6 375 14 386 1.46e-88 273
MsG0580030112.01.T01 MTR_4g027450 43.257 393 180 13 6 375 14 386 1.46e-88 273
MsG0580030112.01.T01 MTR_4g130330 42.686 417 186 15 5 397 4 391 1.30e-86 268
MsG0580030112.01.T01 MTR_6g478230 40.670 418 189 10 5 397 24 407 3.53e-86 268
MsG0580030112.01.T01 MTR_3g011120 42.857 371 182 12 7 369 13 361 3.86e-86 266
MsG0580030112.01.T01 MTR_4g117550 40.821 414 174 14 3 397 12 373 4.70e-86 266
MsG0580030112.01.T01 MTR_7g079640 44.687 367 170 13 7 365 12 353 1.01e-85 266
MsG0580030112.01.T01 MTR_7g111700 41.787 414 156 13 7 397 14 365 1.22e-85 265
MsG0580030112.01.T01 MTR_2g104280 41.766 419 190 15 3 390 9 404 1.46e-85 266
MsG0580030112.01.T01 MTR_2g104340 42.453 424 171 17 3 390 9 395 2.02e-85 265
MsG0580030112.01.T01 MTR_5g097680 40.455 440 193 13 3 397 12 427 2.07e-85 266
MsG0580030112.01.T01 MTR_0129s0050 40.509 432 188 16 3 397 9 408 1.62e-83 261
MsG0580030112.01.T01 MTR_8g041270 41.509 424 192 15 3 397 10 406 3.82e-82 257
MsG0580030112.01.T01 MTR_5g072060 43.490 384 151 14 7 364 5 348 5.25e-82 263
MsG0580030112.01.T01 MTR_5g024260 41.969 386 178 15 5 365 19 383 1.11e-81 256
MsG0580030112.01.T01 MTR_4g055820 42.466 365 169 11 3 341 9 358 2.05e-81 254
MsG0580030112.01.T01 MTR_4g028750 40.863 394 183 13 6 373 14 383 4.40e-81 254
MsG0580030112.01.T01 MTR_1g007450 41.191 403 197 13 3 383 7 391 4.45e-81 255
MsG0580030112.01.T01 MTR_2g034700 41.734 369 185 10 6 368 12 356 5.93e-80 251
MsG0580030112.01.T01 MTR_8g464770 40.970 371 193 10 3 366 7 358 1.35e-79 250
MsG0580030112.01.T01 MTR_2g064950 41.582 392 169 16 1 362 3 364 6.31e-78 246
MsG0580030112.01.T01 MTR_0831s0010 39.655 406 193 13 5 390 47 420 4.42e-77 244
MsG0580030112.01.T01 MTR_8g046310 39.646 396 196 16 6 393 14 374 4.77e-77 243
MsG0580030112.01.T01 MTR_8g013000 39.250 400 204 10 3 378 5 389 5.17e-77 244
MsG0580030112.01.T01 MTR_8g033140 38.497 439 188 16 5 397 16 418 2.55e-76 243
MsG0580030112.01.T01 MTR_6g090250 39.379 419 178 13 26 394 29 421 6.53e-75 239
MsG0580030112.01.T01 MTR_6g078010 41.918 365 160 13 45 392 1 330 9.84e-75 236
MsG0580030112.01.T01 MTR_2g066170 38.350 412 201 19 3 395 7 384 1.08e-74 238
MsG0580030112.01.T01 MTR_5g091140 40.447 403 181 17 3 383 43 408 1.13e-74 238
MsG0580030112.01.T01 MTR_2g066200 37.198 414 205 16 3 395 7 386 1.22e-74 237
MsG0580030112.01.T01 MTR_7g016930 40.947 359 163 9 3 347 11 334 1.50e-74 235
MsG0580030112.01.T01 MTR_8g467670 39.459 370 189 13 6 365 12 356 1.91e-74 237
MsG0580030112.01.T01 MTR_5g096900 45.312 320 149 11 3 309 7 313 1.21e-73 233
MsG0580030112.01.T01 MTR_8g039500 40.811 370 174 16 3 357 7 346 1.64e-73 233
MsG0580030112.01.T01 MTR_2g066150 37.317 410 186 16 3 397 7 360 2.16e-71 228
MsG0580030112.01.T01 MTR_2g065860 36.829 410 212 14 3 395 7 386 3.52e-71 228
MsG0580030112.01.T01 MTR_8g036970 39.612 361 154 14 16 371 6 307 5.42e-71 228
MsG0580030112.01.T01 MTR_4g014370 35.267 431 212 11 3 395 6 407 9.39e-71 228
MsG0580030112.01.T01 MTR_2g065840 35.036 411 219 13 3 395 7 387 9.28e-70 225
MsG0580030112.01.T01 MTR_8g064890 38.281 384 191 12 6 370 14 370 1.89e-69 224
MsG0580030112.01.T01 MTR_1g053510 36.385 426 199 15 5 393 12 402 4.72e-69 223
MsG0580030112.01.T01 MTR_1g007430 41.329 346 155 11 19 344 7 324 1.67e-68 219
MsG0580030112.01.T01 MTR_5g074800 41.643 353 155 15 47 372 1 329 1.70e-68 220
MsG0580030112.01.T01 MTR_8g046200 36.073 438 197 16 6 393 14 418 2.04e-67 219
MsG0580030112.01.T01 MTR_8g063330 38.162 359 175 11 7 341 13 348 9.00e-67 219
MsG0580030112.01.T01 MTR_5g074850 38.614 404 177 18 3 366 30 402 2.52e-66 227
MsG0580030112.01.T01 MTR_8g033110 36.136 440 201 17 5 398 11 416 5.46e-66 216
MsG0580030112.01.T01 MTR_8g033090 34.862 436 207 16 6 398 12 413 9.99e-66 215
MsG0580030112.01.T01 MTR_5g092850 35.849 424 197 15 7 394 15 399 2.61e-64 211
MsG0580030112.01.T01 MTR_5g064700 38.636 396 172 16 47 398 1 369 2.71e-64 210
MsG0580030112.01.T01 MTR_8g064790 36.776 397 174 15 6 397 13 337 2.96e-63 206
MsG0580030112.01.T01 MTR_6g079790 38.110 328 156 8 97 397 2 309 4.24e-63 205
MsG0580030112.01.T01 MTR_1g098180 35.770 383 177 12 6 370 17 348 4.08e-62 204
MsG0580030112.01.T01 MTR_5g086590 45.064 233 105 5 139 360 11 231 6.18e-62 199
MsG0580030112.01.T01 MTR_5g075370 38.084 407 176 22 6 368 6 380 1.25e-61 212
MsG0580030112.01.T01 MTR_8g032980 33.787 441 198 12 6 388 14 418 3.73e-61 203
MsG0580030112.01.T01 MTR_4g007940 39.423 312 146 8 81 365 24 319 6.01e-61 201
MsG0580030112.01.T01 MTR_5g097850 43.253 289 97 7 119 395 10 243 1.28e-60 197
MsG0580030112.01.T01 MTR_6g087620 40.125 319 135 10 85 387 1 279 1.87e-60 197
MsG0580030112.01.T01 MTR_8g018110 33.638 437 196 13 6 398 12 398 3.33e-60 200
MsG0580030112.01.T01 MTR_8g046220 34.651 430 197 17 6 393 15 402 4.58e-60 200
MsG0580030112.01.T01 MTR_7g023800 39.118 340 140 11 47 368 1 291 4.24e-59 194
MsG0580030112.01.T01 MTR_5g092860 35.696 381 156 16 26 366 20 351 2.81e-58 194
MsG0580030112.01.T01 MTR_5g022850 34.058 414 177 11 2 390 10 352 7.83e-58 192
MsG0580030112.01.T01 MTR_8g063310 32.391 389 214 13 3 369 17 378 4.60e-57 192
MsG0580030112.01.T01 MTR_8g063370 34.677 372 199 11 15 370 31 374 5.92e-57 192
MsG0580030112.01.T01 MTR_1g050312 42.123 292 127 12 85 367 16 274 6.50e-55 183
MsG0580030112.01.T01 MTR_7g104710 39.032 310 141 10 4 301 13 286 1.73e-53 180
MsG0580030112.01.T01 MTR_5g076490 37.076 383 164 14 45 397 1 336 4.11e-53 180
MsG0580030112.01.T01 MTR_5g066420 61.972 142 47 3 232 368 1 140 4.88e-52 171
MsG0580030112.01.T01 MTR_6g090260 46.939 196 91 4 203 394 75 261 2.73e-51 173
MsG0580030112.01.T01 MTR_6g090260 55.769 52 23 0 6 57 18 69 2.83e-11 63.9
MsG0580030112.01.T01 MTR_5g043605 34.593 344 174 14 70 393 23 335 7.75e-51 175
MsG0580030112.01.T01 MTR_5g068490 36.093 302 155 10 94 393 8 273 1.18e-50 172
MsG0580030112.01.T01 MTR_1g050308 35.598 368 165 11 3 366 29 328 2.07e-50 173
MsG0580030112.01.T01 MTR_6g004450 45.339 236 99 7 173 395 49 267 9.29e-50 169
MsG0580030112.01.T01 MTR_5g023970 48.000 200 91 5 200 397 8 196 1.03e-49 166
MsG0580030112.01.T01 MTR_1g076810 44.493 227 101 7 3 219 13 224 1.64e-48 174
MsG0580030112.01.T01 MTR_5g037190 39.630 270 121 10 1 256 9 250 4.52e-48 164
MsG0580030112.01.T01 MTR_8g063350 31.854 383 173 14 8 370 14 328 6.86e-48 166
MsG0580030112.01.T01 MTR_4g014370 31.421 401 185 12 3 395 17 335 2.09e-47 165
MsG0580030112.01.T01 MTR_2g021920 41.532 248 105 8 171 392 35 268 1.56e-46 160
MsG0580030112.01.T01 MTR_5g097650 53.165 158 51 2 7 164 21 155 3.36e-44 151
MsG0580030112.01.T01 MTR_5g094350 35.548 301 128 10 4 271 9 276 2.28e-43 152
MsG0580030112.01.T01 MTR_4g016000 41.748 206 88 5 146 336 2 190 2.38e-42 148
MsG0580030112.01.T01 MTR_6g009350 43.147 197 87 7 169 347 4 193 2.28e-41 145
MsG0580030112.01.T01 MTR_5g097660 60.769 130 39 3 270 398 3 121 2.31e-41 142
MsG0580030112.01.T01 MTR_6g070880 37.097 248 110 8 2 220 26 256 5.30e-41 146
MsG0580030112.01.T01 MTR_6g071420 37.097 248 110 8 2 220 26 256 5.30e-41 146
MsG0580030112.01.T01 MTR_8g033000 31.658 398 194 16 45 398 1 364 1.09e-40 148
MsG0580030112.01.T01 MTR_5g096920 48.810 168 69 6 232 398 1 152 6.17e-40 139
MsG0580030112.01.T01 MTR_2g104260 38.328 287 132 11 3 262 9 277 1.43e-39 142
MsG0580030112.01.T01 MTR_6g465360 43.500 200 83 7 3 188 57 240 3.17e-39 142
MsG0580030112.01.T01 MTR_5g097540 52.414 145 62 4 201 344 95 233 2.52e-38 140
MsG0580030112.01.T01 MTR_6g079730 46.203 158 72 3 239 394 1 147 1.73e-36 130
MsG0580030112.01.T01 MTR_3g018750 34.766 256 119 9 173 397 3 241 2.60e-36 133
MsG0580030112.01.T01 MTR_5g098950 41.589 214 84 8 143 344 90 274 2.20e-35 131
MsG0580030112.01.T01 MTR_8g073570 40.556 180 91 5 5 184 7 170 2.60e-35 128
MsG0580030112.01.T01 MTR_7g019250 37.445 227 111 5 155 367 206 415 9.62e-35 134
MsG0580030112.01.T01 MTR_7g017150 34.962 266 151 8 139 397 17 267 1.61e-33 126
MsG0580030112.01.T01 MTR_5g091150 39.336 211 89 6 97 294 2 186 2.23e-33 124
MsG0580030112.01.T01 MTR_7g017120 34.211 266 152 8 139 397 17 266 2.59e-32 123
MsG0580030112.01.T01 MTR_5g096070 42.938 177 61 6 4 180 22 158 7.58e-32 118
MsG0580030112.01.T01 MTR_8g035690 33.677 291 132 12 147 395 30 301 8.18e-31 120
MsG0580030112.01.T01 MTR_3g030620 44.720 161 79 5 225 380 16 171 3.00e-30 115
MsG0580030112.01.T01 MTR_2g028130 24.873 394 238 16 4 364 1 369 2.72e-28 115
MsG0580030112.01.T01 MTR_1g047080 28.962 366 164 15 45 397 1 283 6.79e-28 111
MsG0580030112.01.T01 MTR_5g086780 49.533 107 52 1 257 363 123 227 6.34e-27 107
MsG0580030112.01.T01 MTR_1g115205 33.463 257 99 10 8 240 29 237 6.77e-26 105
MsG0580030112.01.T01 MTR_8g041440 52.941 102 25 1 3 104 10 88 1.17e-25 100
MsG0580030112.01.T01 MTR_2g022020 52.525 99 45 1 265 363 1 97 1.25e-25 100
MsG0580030112.01.T01 MTR_5g096050 54.545 110 39 3 232 330 1 110 4.46e-25 99.4
MsG0580030112.01.T01 MTR_2g028160 24.384 406 241 17 4 371 1 378 1.37e-23 102
MsG0580030112.01.T01 MTR_2g028140 25.000 388 238 18 4 361 1 365 3.04e-23 100
MsG0580030112.01.T01 MTR_3g083010 24.548 387 245 14 8 364 6 375 3.55e-23 100
MsG0580030112.01.T01 MTR_8g101580 26.230 366 219 15 8 360 45 372 4.13e-23 100
MsG0580030112.01.T01 MTR_1g068875 24.339 378 225 15 6 364 2 337 7.10e-23 99.4
MsG0580030112.01.T01 MTR_7g101200 32.579 221 117 8 141 351 38 236 1.48e-22 95.9
MsG0580030112.01.T01 MTR_3g019290 31.081 222 82 5 5 209 11 178 4.78e-22 92.8
MsG0580030112.01.T01 MTR_5g036250 52.941 85 38 1 282 366 8 90 7.14e-22 92.4
MsG0580030112.01.T01 MTR_5g049560 43.333 150 76 6 45 188 1 147 1.71e-21 93.6
MsG0580030112.01.T01 MTR_1g054575 28.125 352 196 16 8 348 52 357 2.86e-21 96.3
MsG0580030112.01.T01 MTR_4g023080 27.859 341 198 13 7 340 8 307 3.22e-21 94.4
MsG0580030112.01.T01 MTR_4g070550 25.373 402 228 20 4 366 1 369 3.43e-21 94.7
MsG0580030112.01.T01 MTR_3g103020 26.902 368 218 14 7 361 19 348 5.30e-21 94.0
MsG0580030112.01.T01 MTR_1g068860 25.132 378 221 17 8 364 4 340 8.96e-21 93.2
MsG0580030112.01.T01 MTR_2g046920 25.455 330 190 11 5 321 21 307 9.39e-21 93.2
MsG0580030112.01.T01 MTR_2g031720 24.474 380 225 16 8 364 6 346 1.52e-20 92.8
MsG0580030112.01.T01 MTR_2g046900 26.769 325 200 11 5 321 25 319 1.78e-20 92.8
MsG0580030112.01.T01 MTR_2g426070 23.575 386 233 18 9 364 7 360 2.45e-20 92.4
MsG0580030112.01.T01 MTR_4g094400 42.857 105 46 2 229 319 7 111 2.75e-20 86.7
MsG0580030112.01.T01 MTR_1g097330 27.129 317 193 12 8 321 16 297 3.32e-20 92.0
MsG0580030112.01.T01 MTR_1g097560 27.296 392 224 19 7 391 35 372 4.88e-20 91.3
MsG0580030112.01.T01 MTR_4g133170 26.146 371 214 19 6 358 2 330 8.62e-20 90.5
MsG0580030112.01.T01 MTR_7g070440 25.313 399 213 16 5 368 4 352 8.97e-20 90.5
MsG0580030112.01.T01 MTR_4g021785 26.230 366 215 14 7 362 8 328 2.35e-19 89.0
MsG0580030112.01.T01 MTR_2g021150 27.554 323 201 15 8 325 14 308 2.59e-19 89.0
MsG0580030112.01.T01 MTR_3g047580 32.895 152 66 3 5 155 11 127 3.39e-19 83.6
MsG0580030112.01.T01 MTR_2g426060 25.000 380 228 19 8 360 6 355 4.46e-19 88.6
MsG0580030112.01.T01 MTR_5g094360 41.880 117 55 2 151 254 40 156 6.09e-19 83.6
MsG0580030112.01.T01 MTR_4g030830 26.531 343 194 15 3 319 4 314 9.91e-19 87.4
MsG0580030112.01.T01 MTR_0667s0010 25.075 335 198 15 7 321 5 306 1.02e-18 87.8
MsG0580030112.01.T01 MTR_2g055970 26.911 327 195 13 3 321 206 496 1.16e-18 88.2
MsG0580030112.01.T01 MTR_2g025960 26.721 247 143 12 142 360 29 265 4.21e-18 84.7
MsG0580030112.01.T01 MTR_5g070080 24.100 361 243 11 7 351 9 354 5.44e-18 85.5
MsG0580030112.01.T01 MTR_2g026010 26.460 291 185 14 95 363 60 343 6.21e-18 85.1
MsG0580030112.01.T01 MTR_1g097490 26.332 319 200 11 4 321 45 329 6.25e-18 85.1
MsG0580030112.01.T01 MTR_3g007430 23.295 352 216 9 11 349 46 356 7.15e-18 85.1
MsG0580030112.01.T01 MTR_1g009110 26.415 371 218 16 10 355 16 356 9.65e-18 84.3
MsG0580030112.01.T01 MTR_6g016285 24.105 419 223 15 8 368 21 402 9.85e-18 85.1
MsG0580030112.01.T01 MTR_8g013010 28.626 262 155 9 7 262 53 288 1.47e-17 83.2
MsG0580030112.01.T01 MTR_1g037540 24.093 386 247 13 11 365 8 378 1.55e-17 84.0
MsG0580030112.01.T01 MTR_2g031680 23.118 372 233 14 8 364 6 339 1.75e-17 84.0
MsG0580030112.01.T01 MTR_5g070088 25.513 341 206 10 3 322 2 315 1.78e-17 84.0
MsG0580030112.01.T01 MTR_3g034180 25.916 382 212 17 7 361 122 459 2.44e-17 84.0
MsG0580030112.01.T01 MTR_4g117780 26.923 364 208 14 8 351 11 336 2.53e-17 83.2
MsG0580030112.01.T01 MTR_3g009310 25.157 318 203 10 8 322 42 327 4.73e-17 82.4
MsG0580030112.01.T01 MTR_4g094365 25.613 367 222 13 7 361 7 334 4.79e-17 82.4
MsG0580030112.01.T01 MTR_2g046830 25.294 340 197 14 5 329 22 319 4.81e-17 82.8
MsG0580030112.01.T01 MTR_1g094210 23.670 376 212 13 8 362 57 378 5.36e-17 82.4
MsG0580030112.01.T01 MTR_5g057790 23.926 326 203 10 8 325 46 334 5.39e-17 82.4
MsG0580030112.01.T01 MTR_1g094210 25.538 372 204 15 8 359 57 375 5.77e-17 82.4
MsG0580030112.01.T01 MTR_4g019990 26.377 345 189 16 6 319 4 314 7.51e-17 82.0
MsG0580030112.01.T01 MTR_5g057710 24.847 326 200 11 8 325 46 334 1.09e-16 81.6
MsG0580030112.01.T01 MTR_0115s0020 22.651 415 271 15 7 396 9 398 1.12e-16 81.6
MsG0580030112.01.T01 MTR_3g007360 25.191 393 228 20 11 379 55 405 1.39e-16 81.3
MsG0580030112.01.T01 MTR_3g034130 27.056 377 215 18 7 361 8 346 1.44e-16 80.9
MsG0580030112.01.T01 MTR_4g117850 25.062 403 231 18 7 391 22 371 2.88e-16 80.1
MsG0580030112.01.T01 MTR_4g023130 28.000 225 132 7 141 351 76 284 5.56e-16 78.6
MsG0580030112.01.T01 MTR_4g023090 26.377 345 208 12 7 340 15 324 6.32e-16 79.3
MsG0580030112.01.T01 MTR_4g116330 25.272 368 229 14 3 361 18 348 7.74e-16 79.0
MsG0580030112.01.T01 MTR_2g078850 26.006 323 181 15 11 319 33 311 8.02e-16 78.6
MsG0580030112.01.T01 MTR_8g467140 26.506 332 180 16 8 321 32 317 8.26e-16 78.2
MsG0580030112.01.T01 MTR_2g078900 24.534 322 190 13 8 319 33 311 8.29e-16 78.6
MsG0580030112.01.T01 MTR_3g014540 25.000 364 214 15 8 356 29 348 8.68e-16 78.6
MsG0580030112.01.T01 MTR_4g023120 26.606 327 187 13 8 321 3 289 1.16e-15 78.2
MsG0580030112.01.T01 MTR_3g013770 24.074 378 230 14 8 373 33 365 1.82e-15 77.8
MsG0580030112.01.T01 MTR_3g097190 55.932 59 24 1 306 364 28 84 2.11e-15 74.3
MsG0580030112.01.T01 MTR_3g007410 24.936 393 229 19 11 379 55 405 3.53e-15 77.0
MsG0580030112.01.T01 MTR_2g031640 27.027 259 161 13 126 364 92 342 3.96e-15 76.6
MsG0580030112.01.T01 MTR_4g122850 25.138 362 222 15 19 367 12 337 5.44e-15 76.3
MsG0580030112.01.T01 MTR_2g426020 24.352 386 233 18 7 369 5 354 6.34e-15 76.3
MsG0580030112.01.T01 MTR_2g029990 25.000 340 223 11 9 347 52 360 7.41e-15 76.3
MsG0580030112.01.T01 MTR_0064s0160 24.816 407 256 18 7 388 41 422 8.74e-15 75.9
MsG0580030112.01.T01 MTR_1g055135 26.250 400 235 18 7 391 12 366 1.33e-14 75.1
MsG0580030112.01.T01 MTR_3g007270 25.076 331 199 13 8 322 47 344 1.80e-14 75.1
MsG0580030112.01.T01 MTR_0128s0020 25.076 331 194 17 8 317 18 315 1.86e-14 74.7
MsG0580030112.01.T01 MTR_1g050305 44.681 94 38 4 279 367 20 104 2.77e-14 70.1
MsG0580030112.01.T01 MTR_5g010550 25.946 370 209 15 7 330 43 393 2.79e-14 74.7
MsG0580030112.01.T01 MTR_4g117770 26.287 369 206 16 7 351 10 336 2.89e-14 73.9
MsG0580030112.01.T01 MTR_4g117810 26.287 369 206 16 7 351 10 336 2.89e-14 73.9
MsG0580030112.01.T01 MTR_5g010550 25.946 370 209 15 7 330 57 407 3.12e-14 74.7
MsG0580030112.01.T01 MTR_8g433040 25.197 381 208 18 7 366 17 341 3.44e-14 73.9
MsG0580030112.01.T01 MTR_8g032380 25.197 381 208 18 7 366 17 341 3.44e-14 73.9
MsG0580030112.01.T01 MTR_3g014570 24.478 335 186 13 8 322 29 316 3.82e-14 73.9
MsG0580030112.01.T01 MTR_8g073550 28.571 217 119 7 8 218 30 216 5.03e-14 71.6
MsG0580030112.01.T01 MTR_5g048160 23.798 416 260 15 7 394 3 389 5.84e-14 73.2
MsG0580030112.01.T01 MTR_0128s0070 25.301 332 193 17 7 317 21 318 9.90e-14 72.8
MsG0580030112.01.T01 MTR_5g057020 23.292 322 195 10 8 325 46 319 1.13e-13 72.0
MsG0580030112.01.T01 MTR_4g109280 26.446 363 217 11 7 361 7 327 1.32e-13 72.0
MsG0580030112.01.T01 MTR_4g109270 24.242 363 228 13 8 360 8 333 1.41e-13 72.0
MsG0580030112.01.T01 MTR_4g023380 24.854 342 192 10 3 322 11 309 1.49e-13 72.0
MsG0580030112.01.T01 MTR_3g007330 23.529 323 197 12 8 322 48 328 1.76e-13 71.6
MsG0580030112.01.T01 MTR_1g115160 24.444 315 196 10 7 319 21 295 1.78e-13 71.6
MsG0580030112.01.T01 MTR_7g061060 27.114 343 188 17 2 319 7 312 1.87e-13 71.6
MsG0580030112.01.T01 MTR_2g046800 23.353 334 216 10 8 321 14 327 2.04e-13 71.6
MsG0580030112.01.T01 MTR_4g061340 24.927 341 186 16 8 325 26 319 2.28e-13 71.2
MsG0580030112.01.T01 MTR_6g060650 27.193 228 150 6 141 361 125 343 2.37e-13 71.2
MsG0580030112.01.T01 MTR_0242s0060 25.000 336 202 13 8 317 9 320 4.92e-13 70.5
MsG0580030112.01.T01 MTR_0242s0040 25.000 336 202 13 8 317 9 320 4.92e-13 70.5
MsG0580030112.01.T01 MTR_3g047540 43.243 74 38 3 203 274 6 77 5.89e-13 64.7
MsG0580030112.01.T01 MTR_5g057690 22.910 323 200 10 8 325 46 324 6.15e-13 70.1
MsG0580030112.01.T01 MTR_3g013740 24.484 339 201 12 3 321 39 342 7.05e-13 70.1
MsG0580030112.01.T01 MTR_5g097210 24.523 367 224 14 8 362 9 334 7.42e-13 69.7
MsG0580030112.01.T01 MTR_7g407070 25.382 327 206 14 8 319 32 335 8.07e-13 69.7
MsG0580030112.01.T01 MTR_3g034160 25.000 336 195 15 7 322 8 306 9.19e-13 69.3
MsG0580030112.01.T01 MTR_7g079400 26.721 247 156 9 126 361 70 302 9.27e-13 69.3
MsG0580030112.01.T01 MTR_7g061050 25.948 343 189 16 2 319 7 309 1.12e-12 69.3
MsG0580030112.01.T01 MTR_8g032390 22.835 381 208 17 7 367 39 353 1.18e-12 69.3
MsG0580030112.01.T01 MTR_4g117720 26.471 238 154 9 134 361 116 342 1.19e-12 69.3
MsG0580030112.01.T01 MTR_7g077970 25.444 338 202 13 8 317 7 322 3.14e-12 68.2
MsG0580030112.01.T01 MTR_2g024100 22.581 248 166 9 141 364 119 364 3.26e-12 68.2
MsG0580030112.01.T01 MTR_6g086920 24.038 416 227 17 8 351 38 436 4.08e-12 68.2
MsG0580030112.01.T01 MTR_3g058470 27.232 224 128 9 8 220 37 236 4.81e-12 67.4
MsG0580030112.01.T01 MTR_7g079370 26.800 250 153 10 134 363 88 327 5.62e-12 67.0
MsG0580030112.01.T01 MTR_3g006670 25.526 333 202 16 8 329 49 346 5.89e-12 67.4
MsG0580030112.01.T01 MTR_8g099460 24.011 379 224 17 8 360 5 345 6.84e-12 67.0
MsG0580030112.01.T01 MTR_3g030250 24.294 354 206 15 8 353 37 336 8.13e-12 66.6
MsG0580030112.01.T01 MTR_5g097730 58.000 50 21 0 296 345 3 52 9.06e-12 60.5
MsG0580030112.01.T01 MTR_3g072470 25.434 346 197 17 2 317 13 327 1.08e-11 66.6
MsG0580030112.01.T01 MTR_4g116330 24.185 368 194 14 3 361 18 309 1.12e-11 65.9
MsG0580030112.01.T01 MTR_6g048140 25.945 397 182 20 8 355 39 372 1.14e-11 66.2
MsG0580030112.01.T01 MTR_0707s0020 24.793 363 205 15 8 319 26 371 1.37e-11 66.2
MsG0580030112.01.T01 MTR_3g006570 22.254 355 213 16 8 347 21 327 1.70e-11 65.9
MsG0580030112.01.T01 MTR_5g069930 23.313 326 206 11 7 317 5 301 1.80e-11 65.5
MsG0580030112.01.T01 MTR_7g078900 24.029 412 249 17 10 376 14 406 1.83e-11 65.9
MsG0580030112.01.T01 MTR_3g030330 23.248 314 200 13 8 319 20 294 2.64e-11 65.1
MsG0580030112.01.T01 MTR_6g046320 24.719 356 204 15 8 319 39 374 2.75e-11 65.5
MsG0580030112.01.T01 MTR_2g043400 24.926 337 190 18 10 317 25 327 2.90e-11 65.1
MsG0580030112.01.T01 MTR_6g087660 39.175 97 51 3 6 100 16 106 3.30e-11 62.4
MsG0580030112.01.T01 MTR_3g011100 23.565 331 198 12 8 322 235 526 5.00e-11 64.7
MsG0580030112.01.T01 MTR_3g010390 24.926 337 198 13 8 322 33 336 5.86e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030112.01.T01 AT3G06240 24.272 412 257 20 8 389 36 422 5.77e-15 76.6
MsG0580030112.01.T01 AT4G22390 22.835 381 229 15 6 360 2 343 1.97e-13 71.6
MsG0580030112.01.T01 AT4G22390 22.835 381 229 15 6 360 2 343 2.02e-13 71.6
MsG0580030112.01.T01 AT3G10240 32.787 183 91 9 8 187 27 180 1.50e-12 68.9

Find 80 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAACATAGTCATGAAATA+TGG 0.235536 5:+106804959 None:intergenic
CAACATATTACCCTTCTTTC+CGG 0.260637 5:+106804085 None:intergenic
ATAATTACAACCCCTATATA+TGG 0.266451 5:-106804496 MsG0580030112.01.T01:CDS
TGAAAAGATCGTCAGGTATA+TGG 0.271608 5:+106805065 None:intergenic
AGACATTTGGTGCTATTAAA+TGG 0.277047 5:-106804245 MsG0580030112.01.T01:CDS
AATCAAGCTCCTCAATCATT+TGG 0.282542 5:+106804012 None:intergenic
CTATATATCTCCCATATATA+GGG 0.289364 5:+106804485 None:intergenic
CACATTTGTTGTCATTTGAT+TGG 0.291344 5:-106804340 MsG0580030112.01.T01:CDS
CAAACATTTATTCCCTTTGA+TGG 0.292356 5:-106804878 MsG0580030112.01.T01:CDS
ACTATATATCTCCCATATAT+AGG 0.302339 5:+106804484 None:intergenic
ATCAAATCTTTGAAGAGGTT+TGG 0.304451 5:-106805019 MsG0580030112.01.T01:CDS
TATAAAACAGAGTATGATTC+TGG 0.304596 5:-106804749 MsG0580030112.01.T01:CDS
TTTGTTATTCATCATGCATT+TGG 0.316462 5:-106804578 MsG0580030112.01.T01:CDS
AAAGACACATCATGATAATA+AGG 0.319483 5:+106804911 None:intergenic
AGTTTAATTTCCTTAGTAGA+TGG 0.332258 5:+106804644 None:intergenic
TTTGATTTGTATTCTGTTGC+TGG 0.332374 5:-106804836 MsG0580030112.01.T01:CDS
TGGTGAGAGGTTTGAGAATA+GGG 0.340530 5:-106804816 MsG0580030112.01.T01:CDS
ACAGGATCTAATTTGACATT+TGG 0.346787 5:+106804779 None:intergenic
AAAACACGATGACCGTTTCA+TGG 0.360230 5:-106803979 MsG0580030112.01.T01:CDS
CTGGTGAGAGGTTTGAGAAT+AGG 0.361405 5:-106804817 MsG0580030112.01.T01:CDS
TTTAAGATATTAATACATAA+AGG 0.370792 5:-106803942 MsG0580030112.01.T01:CDS
ACGACGATGGTGGACTAGTT+TGG 0.372436 5:-106804049 MsG0580030112.01.T01:CDS
TTAGGTTCCGGTAGTGTTCA+TGG 0.375767 5:-106804716 MsG0580030112.01.T01:CDS
CCTTGCCTGAAGTATCCTAT+TGG 0.378382 5:-106804110 MsG0580030112.01.T01:CDS
ATCAAGCTCCTCAATCATTT+GGG 0.389645 5:+106804013 None:intergenic
CGGCTCCAATAGGATACTTC+AGG 0.394984 5:+106804105 None:intergenic
ATCATCCATGTCTGAAGGTA+TGG 0.398145 5:+106804292 None:intergenic
GAAGACCAATTGTATATAGA+TGG 0.400882 5:-106804404 MsG0580030112.01.T01:CDS
CATCTTAAATTACAAAGATA+CGG 0.410621 5:-106804210 MsG0580030112.01.T01:CDS
TAAATGTTTGCTCCTTCAAA+TGG 0.413607 5:+106803909 None:intergenic
TCAAATTAGATCCTGTATAT+CGG 0.414354 5:-106804772 MsG0580030112.01.T01:CDS
CCCTTCTTTCCGGCTCCAAT+AGG 0.418357 5:+106804095 None:intergenic
GGAAGCATTCTTCCATTTGA+AGG 0.429976 5:-106803921 MsG0580030112.01.T01:CDS
ATTGTGGAATCCATCTACTA+AGG 0.438655 5:-106804654 MsG0580030112.01.T01:CDS
AACCTCTTCAAAGATTTGAT+AGG 0.439619 5:+106805022 None:intergenic
TTTAAATACCCAAATGATTG+AGG 0.443822 5:-106804021 MsG0580030112.01.T01:CDS
CAATTAGGTTCAGAATCAAA+AGG 0.468185 5:+106804608 None:intergenic
AGAGTCCATCTATATACAAT+TGG 0.471760 5:+106804399 None:intergenic
AGGTTCAGAATCAAAAGGGC+TGG 0.473613 5:+106804613 None:intergenic
GAAAAGATCGTCAGGTATAT+GGG 0.479257 5:+106805066 None:intergenic
AGGATACTTCAGGCAAGGTA+AGG 0.480502 5:+106804115 None:intergenic
TTTCGTCAACAACTGTTCCT+TGG 0.482022 5:+106804519 None:intergenic
TCCTATTGGAGCCGGAAAGA+AGG 0.483284 5:-106804096 MsG0580030112.01.T01:CDS
TTATTCGGTGTGGAGACATT+TGG 0.485501 5:-106804258 MsG0580030112.01.T01:CDS
AACTTGGTGTAAAGAAATCA+TGG 0.486592 5:-106804160 MsG0580030112.01.T01:CDS
ATCTTAAATTACAAAGATAC+GGG 0.489780 5:-106804209 MsG0580030112.01.T01:CDS
GACATTTGGTGCTATTAAAT+GGG 0.495067 5:-106804244 MsG0580030112.01.T01:CDS
TAATTACAACCCCTATATAT+GGG 0.496490 5:-106804495 MsG0580030112.01.T01:CDS
GAAACATAGTCATGAAATAT+GGG 0.497941 5:+106804960 None:intergenic
ACAGAGTTGAAAAGATCGTC+AGG 0.503470 5:+106805058 None:intergenic
TACCTATCAAATCTTTGAAG+AGG 0.527859 5:-106805024 MsG0580030112.01.T01:CDS
AGAATAGGGTCAAATTAGAC+TGG 0.527905 5:-106804802 MsG0580030112.01.T01:CDS
AAGAAAATATATCCATGAAA+CGG 0.530428 5:+106803967 None:intergenic
GATCGTCAGGTATATGGGAC+TGG 0.533219 5:+106805071 None:intergenic
ATCGACATAATGACCATCAA+AGG 0.538508 5:+106804865 None:intergenic
CTGAAGTATCCTATTGGAGC+CGG 0.539467 5:-106804104 MsG0580030112.01.T01:CDS
CCTATTGGAGCCGGAAAGAA+GGG 0.539609 5:-106804095 MsG0580030112.01.T01:CDS
GGTTCAGAATCAAAAGGGCT+GGG 0.540475 5:+106804614 None:intergenic
AATTAGGTTCAGAATCAAAA+GGG 0.541876 5:+106804609 None:intergenic
TGTATTCTGTTGCTGGTGAG+AGG 0.555406 5:-106804829 MsG0580030112.01.T01:CDS
TCGACATAATGACCATCAAA+GGG 0.561990 5:+106804866 None:intergenic
CTGAAGGTATGGGTGTGGTA+AGG 0.568618 5:+106804303 None:intergenic
TCGCAATAATCTCTTAACAA+AGG 0.572470 5:-106804939 MsG0580030112.01.T01:CDS
CTCTCACACTGGATGTGTAA+AGG 0.572682 5:-106804380 MsG0580030112.01.T01:CDS
CACACCCATACCTTCAGACA+TGG 0.575462 5:-106804297 MsG0580030112.01.T01:CDS
TCATCCATGTCTGAAGGTAT+GGG 0.583405 5:+106804293 None:intergenic
GACTATAAAGTGATGCGCCA+AGG 0.587368 5:-106804536 MsG0580030112.01.T01:CDS
TCCACAATAAAATATTCACC+CGG 0.588359 5:+106804669 None:intergenic
GAGAGTTCCATGAACACTAC+CGG 0.590608 5:+106804709 None:intergenic
TACAATTGGTCTTCACGCAT+AGG 0.595889 5:+106804413 None:intergenic
AAACTATCATCCATGTCTGA+AGG 0.596668 5:+106804287 None:intergenic
GGATACTTCAGGCAAGGTAA+GGG 0.605335 5:+106804116 None:intergenic
TATATATCTCCCATATATAG+GGG 0.606968 5:+106804486 None:intergenic
ATATAGATGGACTCTCACAC+TGG 0.613394 5:-106804391 MsG0580030112.01.T01:CDS
TTGGATGTGTACGCAAATCG+TGG 0.617538 5:-106805000 MsG0580030112.01.T01:CDS
CCAATAGGATACTTCAGGCA+AGG 0.623282 5:+106804110 None:intergenic
GTCATTTGATTGGAGCAATG+AGG 0.640246 5:-106804330 MsG0580030112.01.T01:CDS
CATGTCTGAAGGTATGGGTG+TGG 0.654543 5:+106804298 None:intergenic
CCACAATAAAATATTCACCC+GGG 0.666541 5:+106804670 None:intergenic
TCAGAATCAAAAGGGCTGGG+AGG 0.695529 5:+106804617 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAGATATTAATACATAA+AGG - Chr5:106805048-106805067 MsG0580030112.01.T01:CDS 10.0%
!! AAGAAAATATATCCATGAAA+CGG + Chr5:106805026-106805045 None:intergenic 20.0%
!! ATAACAAAAACATTGCAATT+AGG + Chr5:106804400-106804419 None:intergenic 20.0%
!! ATCTTAAATTACAAAGATAC+GGG - Chr5:106804781-106804800 MsG0580030112.01.T01:CDS 20.0%
!! CATCTTAAATTACAAAGATA+CGG - Chr5:106804780-106804799 MsG0580030112.01.T01:CDS 20.0%
!!! ACATTTCACATTTCAATTTT+AGG - Chr5:106804805-106804824 MsG0580030112.01.T01:CDS 20.0%
!!! GATTCTGGTTTTAATATTTT+AGG - Chr5:106804256-106804275 MsG0580030112.01.T01:CDS 20.0%
!!! TGATAGTTTTGATTGTTATT+CGG - Chr5:106804717-106804736 MsG0580030112.01.T01:CDS 20.0%
! AAAGACACATCATGATAATA+AGG + Chr5:106804082-106804101 None:intergenic 25.0%
! AATTAGGTTCAGAATCAAAA+GGG + Chr5:106804384-106804403 None:intergenic 25.0%
! ACTATATATCTCCCATATAT+AGG + Chr5:106804509-106804528 None:intergenic 25.0%
! ATAATTACAACCCCTATATA+TGG - Chr5:106804494-106804513 MsG0580030112.01.T01:CDS 25.0%
! ATAGTCTAAAAAACAACTCA+TGG - Chr5:106804524-106804543 MsG0580030112.01.T01:CDS 25.0%
! CTATATATCTCCCATATATA+GGG + Chr5:106804508-106804527 None:intergenic 25.0%
! GAAACATAGTCATGAAATAT+GGG + Chr5:106804033-106804052 None:intergenic 25.0%
! TAATTACAACCCCTATATAT+GGG - Chr5:106804495-106804514 MsG0580030112.01.T01:CDS 25.0%
! TATAAAACAGAGTATGATTC+TGG - Chr5:106804241-106804260 MsG0580030112.01.T01:CDS 25.0%
! TATATATCTCCCATATATAG+GGG + Chr5:106804507-106804526 None:intergenic 25.0%
! TCAAATTAGATCCTGTATAT+CGG - Chr5:106804218-106804237 MsG0580030112.01.T01:CDS 25.0%
! TTTAAATACCCAAATGATTG+AGG - Chr5:106804969-106804988 MsG0580030112.01.T01:CDS 25.0%
!! AGTTTAATTTCCTTAGTAGA+TGG + Chr5:106804349-106804368 None:intergenic 25.0%
!!! ATTTCAATTTTAGGTGAACT+TGG - Chr5:106804814-106804833 MsG0580030112.01.T01:CDS 25.0%
!!! GGTTTTAATATTTTAGGTTC+CGG - Chr5:106804262-106804281 MsG0580030112.01.T01:CDS 25.0%
!!! TTTGTTATTCATCATGCATT+TGG - Chr5:106804412-106804431 MsG0580030112.01.T01:CDS 25.0%
AACCTCTTCAAAGATTTGAT+AGG + Chr5:106803971-106803990 None:intergenic 30.0%
ACAGGATCTAATTTGACATT+TGG + Chr5:106804214-106804233 None:intergenic 30.0%
AGAGTCCATCTATATACAAT+TGG + Chr5:106804594-106804613 None:intergenic 30.0%
CAAACATTTATTCCCTTTGA+TGG - Chr5:106804112-106804131 MsG0580030112.01.T01:CDS 30.0%
CAATTAGGTTCAGAATCAAA+AGG + Chr5:106804385-106804404 None:intergenic 30.0%
CGAAACATAGTCATGAAATA+TGG + Chr5:106804034-106804053 None:intergenic 30.0%
GAAGACCAATTGTATATAGA+TGG - Chr5:106804586-106804605 MsG0580030112.01.T01:CDS 30.0%
TAAATGTTTGCTCCTTCAAA+TGG + Chr5:106805084-106805103 None:intergenic 30.0%
TCCACAATAAAATATTCACC+CGG + Chr5:106804324-106804343 None:intergenic 30.0%
TCGCAATAATCTCTTAACAA+AGG - Chr5:106804051-106804070 MsG0580030112.01.T01:CDS 30.0%
! ATCAAATCTTTGAAGAGGTT+TGG - Chr5:106803971-106803990 MsG0580030112.01.T01:CDS 30.0%
! GGACTAAGATCTTCATTTTA+GGG - Chr5:106804851-106804870 MsG0580030112.01.T01:CDS 30.0%
! TACCTATCAAATCTTTGAAG+AGG - Chr5:106803966-106803985 MsG0580030112.01.T01:CDS 30.0%
! TCTGTTTTATACCGATATAC+AGG + Chr5:106804232-106804251 None:intergenic 30.0%
! TGGACTAAGATCTTCATTTT+AGG - Chr5:106804850-106804869 MsG0580030112.01.T01:CDS 30.0%
!! AACTTGGTGTAAAGAAATCA+TGG - Chr5:106804830-106804849 MsG0580030112.01.T01:CDS 30.0%
!! AGACATTTGGTGCTATTAAA+TGG - Chr5:106804745-106804764 MsG0580030112.01.T01:CDS 30.0%
!! CACATTTGTTGTCATTTGAT+TGG - Chr5:106804650-106804669 MsG0580030112.01.T01:CDS 30.0%
!! GACATTTGGTGCTATTAAAT+GGG - Chr5:106804746-106804765 MsG0580030112.01.T01:CDS 30.0%
!! TTTGATTTGTATTCTGTTGC+TGG - Chr5:106804154-106804173 MsG0580030112.01.T01:CDS 30.0%
AAACTATCATCCATGTCTGA+AGG + Chr5:106804706-106804725 None:intergenic 35.0%
AATCAAGCTCCTCAATCATT+TGG + Chr5:106804981-106805000 None:intergenic 35.0%
AGAATAGGGTCAAATTAGAC+TGG - Chr5:106804188-106804207 MsG0580030112.01.T01:CDS 35.0%
ATCAAGCTCCTCAATCATTT+GGG + Chr5:106804980-106804999 None:intergenic 35.0%
ATCGACATAATGACCATCAA+AGG + Chr5:106804128-106804147 None:intergenic 35.0%
ATTGTGGAATCCATCTACTA+AGG - Chr5:106804336-106804355 MsG0580030112.01.T01:CDS 35.0%
CAACATATTACCCTTCTTTC+CGG + Chr5:106804908-106804927 None:intergenic 35.0%
CCACAATAAAATATTCACCC+GGG + Chr5:106804323-106804342 None:intergenic 35.0%
GAAAAGATCGTCAGGTATAT+GGG + Chr5:106803927-106803946 None:intergenic 35.0%
TCGACATAATGACCATCAAA+GGG + Chr5:106804127-106804146 None:intergenic 35.0%
TGAAAAGATCGTCAGGTATA+TGG + Chr5:106803928-106803947 None:intergenic 35.0%
!!! GTTTTGATTGTTATTCGGTG+TGG - Chr5:106804722-106804741 MsG0580030112.01.T01:CDS 35.0%
AAAACACGATGACCGTTTCA+TGG - Chr5:106805011-106805030 MsG0580030112.01.T01:CDS 40.0%
ACAGAGTTGAAAAGATCGTC+AGG + Chr5:106803935-106803954 None:intergenic 40.0%
ATCATCCATGTCTGAAGGTA+TGG + Chr5:106804701-106804720 None:intergenic 40.0%
GTCATTTGATTGGAGCAATG+AGG - Chr5:106804660-106804679 MsG0580030112.01.T01:CDS 40.0%
TGGTGAGAGGTTTGAGAATA+GGG - Chr5:106804174-106804193 MsG0580030112.01.T01:CDS 40.0%
TTCAGCAAAAAAGACGACGA+TGG - Chr5:106804928-106804947 MsG0580030112.01.T01:CDS 40.0%
TTTCGTCAACAACTGTTCCT+TGG + Chr5:106804474-106804493 None:intergenic 40.0%
! ATATAGATGGACTCTCACAC+TGG - Chr5:106804599-106804618 MsG0580030112.01.T01:CDS 40.0%
! CCCGGGTGAATATTTTATTG+TGG - Chr5:106804320-106804339 MsG0580030112.01.T01:CDS 40.0%
! TCATCCATGTCTGAAGGTAT+GGG + Chr5:106804700-106804719 None:intergenic 40.0%
!! GGAAGCATTCTTCCATTTGA+AGG - Chr5:106805069-106805088 MsG0580030112.01.T01:CDS 40.0%
!! TACAATTGGTCTTCACGCAT+AGG + Chr5:106804580-106804599 None:intergenic 40.0%
!! TTATTCGGTGTGGAGACATT+TGG - Chr5:106804732-106804751 MsG0580030112.01.T01:CDS 40.0%
!!! GAAACGGTCATCGTGTTTTT+TGG + Chr5:106805010-106805029 None:intergenic 40.0%
AGCAAAAAAGACGACGATGG+TGG - Chr5:106804931-106804950 MsG0580030112.01.T01:CDS 45.0%
AGGATACTTCAGGCAAGGTA+AGG + Chr5:106804878-106804897 None:intergenic 45.0%
AGGTTCAGAATCAAAAGGGC+TGG + Chr5:106804380-106804399 None:intergenic 45.0%
CCAATAGGATACTTCAGGCA+AGG + Chr5:106804883-106804902 None:intergenic 45.0%
CTCTCACACTGGATGTGTAA+AGG - Chr5:106804610-106804629 MsG0580030112.01.T01:CDS 45.0%
CTGGTGAGAGGTTTGAGAAT+AGG - Chr5:106804173-106804192 MsG0580030112.01.T01:CDS 45.0%
GACTATAAAGTGATGCGCCA+AGG - Chr5:106804454-106804473 MsG0580030112.01.T01:CDS 45.0%
GAGAGTTCCATGAACACTAC+CGG + Chr5:106804284-106804303 None:intergenic 45.0%
GGATACTTCAGGCAAGGTAA+GGG + Chr5:106804877-106804896 None:intergenic 45.0%
GGTTCAGAATCAAAAGGGCT+GGG + Chr5:106804379-106804398 None:intergenic 45.0%
TGTATTCTGTTGCTGGTGAG+AGG - Chr5:106804161-106804180 MsG0580030112.01.T01:CDS 45.0%
TTAGGTTCCGGTAGTGTTCA+TGG - Chr5:106804274-106804293 MsG0580030112.01.T01:CDS 45.0%
TTGGATGTGTACGCAAATCG+TGG - Chr5:106803990-106804009 MsG0580030112.01.T01:CDS 45.0%
! CCTTGCCTGAAGTATCCTAT+TGG - Chr5:106804880-106804899 MsG0580030112.01.T01:CDS 45.0%
! CTGAAGTATCCTATTGGAGC+CGG - Chr5:106804886-106804905 MsG0580030112.01.T01:CDS 45.0%
! TCTGTCTGTTTTGTGCATCC+CGG - Chr5:106804302-106804321 MsG0580030112.01.T01:CDS 45.0%
CACACCCATACCTTCAGACA+TGG - Chr5:106804693-106804712 MsG0580030112.01.T01:CDS 50.0%
CCTATTGGAGCCGGAAAGAA+GGG - Chr5:106804895-106804914 MsG0580030112.01.T01:CDS 50.0%
CGGCTCCAATAGGATACTTC+AGG + Chr5:106804888-106804907 None:intergenic 50.0%
GATCGTCAGGTATATGGGAC+TGG + Chr5:106803922-106803941 None:intergenic 50.0%
TCAGAATCAAAAGGGCTGGG+AGG + Chr5:106804376-106804395 None:intergenic 50.0%
TCCTATTGGAGCCGGAAAGA+AGG - Chr5:106804894-106804913 MsG0580030112.01.T01:CDS 50.0%
! CATGTCTGAAGGTATGGGTG+TGG + Chr5:106804695-106804714 None:intergenic 50.0%
! CTGAAGGTATGGGTGTGGTA+AGG + Chr5:106804690-106804709 None:intergenic 50.0%
! CTGTCTGTTTTGTGCATCCC+GGG - Chr5:106804303-106804322 MsG0580030112.01.T01:CDS 50.0%
!! ACGACGATGGTGGACTAGTT+TGG - Chr5:106804941-106804960 MsG0580030112.01.T01:CDS 50.0%
CCCTTCTTTCCGGCTCCAAT+AGG + Chr5:106804898-106804917 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 106803908 106805104 106803908 ID=MsG0580030112.01;Name=MsG0580030112.01
Chr5 mRNA 106803908 106805104 106803908 ID=MsG0580030112.01.T01;Parent=MsG0580030112.01;Name=MsG0580030112.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|398
Chr5 exon 106803908 106805104 106803908 ID=MsG0580030112.01.T01:exon:14725;Parent=MsG0580030112.01.T01
Chr5 CDS 106803908 106805104 106803908 ID=MsG0580030112.01.T01:cds;Parent=MsG0580030112.01.T01
Gene Sequence

>MsG0580030112.01.T01

ATGGGGAGAATCCAGTCCCATATACCTGACGATCTTTTCAACTCTGTTCTCTCAAGACTACCTATCAAATCTTTGAAGAGGTTTGGATGTGTACGCAAATCGTGGTCGCTTTTATTTGATAACCCATATTTCATGACTATGTTTCGCAATAATCTCTTAACAAAGGATCATCCTTATTATCATGATGTGTCTTTTCTACTACATCAAACATTTATTCCCTTTGATGGTCATTATGTCGATGAAACATTTGATTTGTATTCTGTTGCTGGTGAGAGGTTTGAGAATAGGGTCAAATTAGACTGGCCAAATGTCAAATTAGATCCTGTATATCGGTATAAAACAGAGTATGATTCTGGTTTTAATATTTTAGGTTCCGGTAGTGTTCATGGAACTCTCTGTCTGTTTTGTGCATCCCGGGTGAATATTTTATTGTGGAATCCATCTACTAAGGAAATTAAACTCATTCCTCCCAGCCCTTTTGATTCTGAACCTAATTGCAATGTTTTTGTTATTCATCATGCATTTGGTTATGATTTTGTCAACAACGACTATAAAGTGATGCGCCAAGGAACAGTTGTTGACGAAAATAATTACAACCCCTATATATGGGAGATATATAGTCTAAAAAACAACTCATGGACAAAACTTGATGTCGATATGCAGAATGAGCCTATGCGTGAAGACCAATTGTATATAGATGGACTCTCACACTGGATGTGTAAAGGTGAAACAAATAATGAAACACATTTGTTGTCATTTGATTGGAGCAATGAGGTTTTCCTTACCACACCCATACCTTCAGACATGGATGATAGTTTTGATTGTTATTCGGTGTGGAGACATTTGGTGCTATTAAATGGGTGTATTGCTTTCATCTTAAATTACAAAGATACGGGTACATTTCACATTTCAATTTTAGGTGAACTTGGTGTAAAGAAATCATGGACTAAGATCTTCATTTTAGGGCCCTTACCTTGCCTGAAGTATCCTATTGGAGCCGGAAAGAAGGGTAATATGTTGTTCAGCAAAAAAGACGACGATGGTGGACTAGTTTGGTTTGATTTAAATACCCAAATGATTGAGGAGCTTGATTTAAATACCAAAAAACACGATGACCGTTTCATGGATATATTTTCTTATTTTAAGATATTAATACATAAAGGAAGCATTCTTCCATTTGAAGGAGCAAACATTTAA
Protein sequence

>MsG0580030112.01.T01

MGRIQSHIPDDLFNSVLSRLPIKSLKRFGCVRKSWSLLFDNPYFMTMFRNNLLTKDHPYYHDVSFLLHQTFIPFDGHYVDETFDLYSVAGERFENRVKLDWPNVKLDPVYRYKTEYDSGFNILGSGSVHGTLCLFCASRVNILLWNPSTKEIKLIPPSPFDSEPNCNVFVIHHAFGYDFVNNDYKVMRQGTVVDENNYNPYIWEIYSLKNNSWTKLDVDMQNEPMREDQLYIDGLSHWMCKGETNNETHLLSFDWSNEVFLTTPIPSDMDDSFDCYSVWRHLVLLNGCIAFILNYKDTGTFHISILGELGVKKSWTKIFILGPLPCLKYPIGAGKKGNMLFSKKDDDGGLVWFDLNTQMIEELDLNTKKHDDRFMDIFSYFKILIHKGSILPFEGANI*