AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035080.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035080.01.T01 MTR_0129s0070 52.500 400 173 12 4 392 2 395 6.62e-129 377
MsG0680035080.01.T01 MTR_0129s0120 50.877 399 181 11 4 392 2 395 4.66e-124 364
MsG0680035080.01.T01 MTR_4g117550 47.236 398 174 10 5 393 3 373 1.87e-107 321
MsG0680035080.01.T01 MTR_0129s0050 47.156 422 180 14 1 393 1 408 7.29e-106 318
MsG0680035080.01.T01 MTR_8g063440 47.287 387 189 11 14 394 7 384 1.18e-103 312
MsG0680035080.01.T01 MTR_5g097330 43.890 401 204 9 11 394 8 404 4.48e-103 311
MsG0680035080.01.T01 MTR_0054s0100 45.631 412 196 12 5 394 4 409 1.60e-98 300
MsG0680035080.01.T01 MTR_0054s0090 45.388 412 196 12 5 394 3 407 5.57e-98 298
MsG0680035080.01.T01 MTR_1g007450 46.457 381 183 9 11 376 4 378 9.17e-98 298
MsG0680035080.01.T01 MTR_4g102410 43.873 408 190 12 11 391 53 448 1.55e-97 298
MsG0680035080.01.T01 MTR_2g022000 44.250 400 184 12 5 372 3 395 1.68e-97 298
MsG0680035080.01.T01 MTR_6g090180 46.154 403 181 15 11 386 39 432 2.51e-96 295
MsG0680035080.01.T01 MTR_2g021800 42.543 409 201 10 5 383 3 407 4.08e-96 294
MsG0680035080.01.T01 MTR_6g086825 45.865 399 188 11 16 392 67 459 9.37e-96 294
MsG0680035080.01.T01 MTR_6g079770 43.855 415 197 11 11 394 9 418 1.38e-95 292
MsG0680035080.01.T01 MTR_2g038680 42.926 417 189 14 11 392 8 410 5.15e-95 291
MsG0680035080.01.T01 MTR_2g066170 43.939 396 198 11 11 394 4 387 1.01e-94 289
MsG0680035080.01.T01 MTR_2g066200 42.750 400 199 10 11 394 4 389 3.75e-94 288
MsG0680035080.01.T01 MTR_6g079810 43.914 419 196 11 1 391 54 461 7.15e-94 290
MsG0680035080.01.T01 MTR_2g104340 46.098 410 173 15 11 392 6 395 7.28e-94 287
MsG0680035080.01.T01 MTR_0134s0060 45.060 415 188 13 11 392 4 411 3.17e-93 286
MsG0680035080.01.T01 MTR_4g028510 44.527 402 192 15 13 392 9 401 1.39e-92 286
MsG0680035080.01.T01 MTR_8g012090 45.304 362 146 10 14 362 11 333 1.30e-91 279
MsG0680035080.01.T01 MTR_6g080680 42.373 413 193 11 1 389 1 392 1.35e-91 281
MsG0680035080.01.T01 MTR_7g069550 44.307 404 184 19 13 392 8 394 1.68e-91 281
MsG0680035080.01.T01 MTR_2g021950 42.683 410 197 14 1 389 1 393 8.36e-91 279
MsG0680035080.01.T01 MTR_3g011120 43.717 382 193 11 9 382 3 370 1.47e-90 278
MsG0680035080.01.T01 MTR_8g467670 43.434 396 200 13 8 395 2 381 3.07e-90 278
MsG0680035080.01.T01 MTR_8g039500 44.751 362 170 10 11 362 4 345 3.41e-90 276
MsG0680035080.01.T01 MTR_4g130330 42.105 399 197 11 16 392 4 390 1.22e-89 276
MsG0680035080.01.T01 MTR_5g097220 45.220 387 168 15 12 367 6 379 2.96e-89 276
MsG0680035080.01.T01 MTR_4g028660 42.716 405 203 13 4 389 1 395 9.89e-89 274
MsG0680035080.01.T01 MTR_4g027450 42.716 405 203 13 4 389 1 395 9.89e-89 274
MsG0680035080.01.T01 MTR_8g041270 42.615 413 188 15 13 392 9 405 1.25e-88 274
MsG0680035080.01.T01 MTR_8g464770 44.271 384 188 14 14 387 7 374 1.66e-88 273
MsG0680035080.01.T01 MTR_2g104280 42.439 410 191 11 14 392 9 404 2.06e-88 273
MsG0680035080.01.T01 MTR_5g096630 41.278 407 211 13 13 394 12 415 5.01e-88 273
MsG0680035080.01.T01 MTR_4g028680 42.857 413 202 16 4 394 1 401 7.28e-88 272
MsG0680035080.01.T01 MTR_5g097350 44.051 395 180 17 14 389 11 383 9.79e-88 271
MsG0680035080.01.T01 MTR_7g017040 42.439 410 194 15 9 393 6 398 1.48e-87 271
MsG0680035080.01.T01 MTR_7g017130 42.787 409 204 15 1 392 1 396 2.48e-87 270
MsG0680035080.01.T01 MTR_5g069390 41.190 420 204 14 12 401 19 425 4.01e-87 273
MsG0680035080.01.T01 MTR_4g055820 45.429 361 165 12 13 350 8 359 8.22e-87 268
MsG0680035080.01.T01 MTR_6g461660 43.544 395 198 12 11 389 11 396 1.21e-86 269
MsG0680035080.01.T01 MTR_0831s0010 42.857 392 193 14 16 393 47 421 3.03e-86 268
MsG0680035080.01.T01 MTR_4g014370 40.095 419 199 14 12 392 4 408 4.91e-86 268
MsG0680035080.01.T01 MTR_7g017170 41.805 421 203 15 1 392 1 408 1.04e-85 267
MsG0680035080.01.T01 MTR_2g065860 41.206 398 204 13 13 394 6 389 1.72e-85 265
MsG0680035080.01.T01 MTR_8g046310 42.893 394 184 15 11 388 5 373 2.74e-84 262
MsG0680035080.01.T01 MTR_2g021770 40.482 415 211 14 8 394 2 408 6.49e-84 262
MsG0680035080.01.T01 MTR_5g097680 42.280 421 197 15 13 392 11 426 9.29e-84 262
MsG0680035080.01.T01 MTR_5g059430 40.330 424 191 15 12 391 19 424 1.84e-83 261
MsG0680035080.01.T01 MTR_5g091140 45.333 375 162 14 11 367 40 389 3.65e-83 260
MsG0680035080.01.T01 MTR_5g096910 41.646 401 198 11 11 392 9 392 3.24e-82 257
MsG0680035080.01.T01 MTR_1g007410 43.832 381 169 14 14 367 17 379 1.18e-81 256
MsG0680035080.01.T01 MTR_7g079640 41.775 383 179 13 18 384 12 366 2.41e-81 254
MsG0680035080.01.T01 MTR_2g034700 44.892 372 169 13 9 368 3 350 5.23e-81 253
MsG0680035080.01.T01 MTR_1g007430 46.440 323 158 9 30 347 7 319 2.68e-80 250
MsG0680035080.01.T01 MTR_2g066150 41.058 397 182 14 11 394 4 361 6.11e-80 250
MsG0680035080.01.T01 MTR_5g037680 42.105 399 185 16 14 387 3 380 1.94e-79 252
MsG0680035080.01.T01 MTR_2g064950 42.462 398 187 16 11 384 2 381 3.92e-79 249
MsG0680035080.01.T01 MTR_5g072060 43.666 371 160 13 17 367 4 345 7.34e-79 255
MsG0680035080.01.T01 MTR_8g033140 40.330 424 196 15 13 394 11 419 3.12e-78 248
MsG0680035080.01.T01 MTR_8g046220 39.529 425 188 16 8 388 2 401 1.36e-77 246
MsG0680035080.01.T01 MTR_8g064890 40.355 394 210 11 13 394 9 389 1.54e-76 243
MsG0680035080.01.T01 MTR_2g065840 39.356 404 206 17 11 393 4 389 2.62e-76 242
MsG0680035080.01.T01 MTR_4g028750 40.945 381 196 15 4 366 1 370 2.64e-75 239
MsG0680035080.01.T01 MTR_6g478230 39.952 413 194 14 12 394 20 408 5.25e-75 239
MsG0680035080.01.T01 MTR_8g013000 42.577 357 179 14 11 349 2 350 1.37e-74 238
MsG0680035080.01.T01 MTR_8g046200 40.046 437 185 21 8 388 2 417 7.06e-74 236
MsG0680035080.01.T01 MTR_7g111700 41.000 400 170 11 16 394 12 366 1.22e-73 234
MsG0680035080.01.T01 MTR_8g032980 39.588 437 191 18 7 390 2 418 1.40e-72 233
MsG0680035080.01.T01 MTR_1g053510 40.686 408 200 15 11 388 6 401 1.91e-72 233
MsG0680035080.01.T01 MTR_5g024260 41.730 393 189 17 1 367 1 379 2.22e-72 233
MsG0680035080.01.T01 MTR_8g036970 40.510 353 138 10 25 366 4 295 3.38e-72 231
MsG0680035080.01.T01 MTR_1g050308 38.653 401 171 11 1 394 16 348 2.10e-71 228
MsG0680035080.01.T01 MTR_5g092850 39.259 405 192 18 18 389 15 398 1.03e-70 228
MsG0680035080.01.T01 MTR_8g063330 42.135 356 180 15 13 352 6 351 6.11e-70 228
MsG0680035080.01.T01 MTR_5g074850 40.000 400 182 16 3 366 19 396 1.37e-67 231
MsG0680035080.01.T01 MTR_5g074800 42.416 356 167 17 58 392 1 339 2.97e-67 217
MsG0680035080.01.T01 MTR_8g033090 38.571 420 196 18 16 392 11 411 1.63e-66 217
MsG0680035080.01.T01 MTR_8g018110 38.780 410 205 14 11 392 5 396 5.27e-65 213
MsG0680035080.01.T01 MTR_7g016930 43.385 325 142 13 13 325 10 304 1.57e-64 209
MsG0680035080.01.T01 MTR_8g064790 36.247 389 182 9 13 394 9 338 1.70e-64 209
MsG0680035080.01.T01 MTR_6g090250 39.440 393 191 13 39 388 31 419 9.43e-64 210
MsG0680035080.01.T01 MTR_8g033110 39.243 423 203 20 11 392 5 414 1.47e-63 209
MsG0680035080.01.T01 MTR_6g078010 40.341 352 169 12 56 388 1 330 2.01e-63 207
MsG0680035080.01.T01 MTR_1g098180 37.778 405 187 16 6 390 4 363 4.05e-63 207
MsG0680035080.01.T01 MTR_5g096900 42.988 328 142 12 14 317 7 313 1.78e-62 204
MsG0680035080.01.T01 MTR_5g022850 36.842 399 179 14 14 394 11 354 2.70e-62 204
MsG0680035080.01.T01 MTR_4g014370 36.896 393 165 15 12 392 15 336 9.20e-62 202
MsG0680035080.01.T01 MTR_5g075370 37.931 406 191 17 16 383 5 387 1.54e-60 209
MsG0680035080.01.T01 MTR_5g092860 39.178 365 160 14 38 373 21 352 3.06e-59 197
MsG0680035080.01.T01 MTR_8g063370 37.736 371 199 11 7 367 16 364 6.04e-58 194
MsG0680035080.01.T01 MTR_4g007940 40.260 308 153 12 91 376 28 326 5.85e-57 190
MsG0680035080.01.T01 MTR_5g064700 38.032 376 185 15 58 393 1 368 8.26e-57 191
MsG0680035080.01.T01 MTR_5g086590 45.259 232 111 7 138 366 13 231 8.90e-56 184
MsG0680035080.01.T01 MTR_6g079790 39.185 319 157 9 103 394 2 310 2.07e-55 185
MsG0680035080.01.T01 MTR_2g021920 44.770 239 105 8 172 389 37 269 3.34e-55 183
MsG0680035080.01.T01 MTR_6g070880 42.797 236 118 6 14 234 27 260 1.92e-54 181
MsG0680035080.01.T01 MTR_6g071420 42.797 236 118 6 14 234 27 260 1.92e-54 181
MsG0680035080.01.T01 MTR_7g104710 39.228 311 139 8 11 306 9 284 1.41e-52 178
MsG0680035080.01.T01 MTR_5g076490 38.798 366 166 14 56 393 1 336 1.61e-52 178
MsG0680035080.01.T01 MTR_6g087620 38.699 292 131 8 91 366 1 260 1.62e-50 171
MsG0680035080.01.T01 MTR_8g063310 34.293 382 207 16 8 367 11 370 2.25e-49 172
MsG0680035080.01.T01 MTR_5g068490 39.073 302 146 13 100 394 8 278 2.61e-49 168
MsG0680035080.01.T01 MTR_8g033000 34.646 381 188 14 56 393 1 363 4.71e-49 170
MsG0680035080.01.T01 MTR_1g050312 38.961 308 143 13 83 380 9 281 5.59e-49 168
MsG0680035080.01.T01 MTR_8g063350 33.952 377 173 11 7 367 2 318 6.74e-48 166
MsG0680035080.01.T01 MTR_6g004450 40.234 256 132 7 150 395 27 271 4.07e-47 162
MsG0680035080.01.T01 MTR_1g076810 41.667 252 128 10 1 244 1 241 7.37e-47 170
MsG0680035080.01.T01 MTR_7g023800 34.294 347 167 10 58 386 1 304 1.31e-46 162
MsG0680035080.01.T01 MTR_5g097820 39.922 258 131 7 4 249 8 253 2.09e-46 160
MsG0680035080.01.T01 MTR_5g097850 48.148 189 81 5 218 394 63 246 9.76e-46 158
MsG0680035080.01.T01 MTR_5g094350 40.502 279 132 11 15 274 9 272 4.15e-45 157
MsG0680035080.01.T01 MTR_6g465360 42.259 239 111 8 5 221 48 281 1.20e-44 156
MsG0680035080.01.T01 MTR_5g043605 32.512 406 184 14 2 392 8 338 1.50e-44 158
MsG0680035080.01.T01 MTR_5g098950 43.256 215 84 5 140 349 90 271 7.31e-44 154
MsG0680035080.01.T01 MTR_8g073570 48.851 174 81 6 11 182 2 169 1.00e-43 150
MsG0680035080.01.T01 MTR_5g023970 42.786 201 103 7 201 394 2 197 1.60e-43 150
MsG0680035080.01.T01 MTR_4g016000 43.961 207 93 8 143 344 2 190 2.10e-42 148
MsG0680035080.01.T01 MTR_2g104260 39.130 276 139 10 13 267 8 275 6.85e-42 149
MsG0680035080.01.T01 MTR_7g019250 43.636 220 106 6 152 368 206 410 5.40e-41 151
MsG0680035080.01.T01 MTR_6g090260 45.604 182 87 4 193 367 59 235 1.56e-40 145
MsG0680035080.01.T01 MTR_6g090260 51.685 89 34 2 1 80 1 89 3.68e-15 75.5
MsG0680035080.01.T01 MTR_8g035690 39.777 269 117 12 161 392 42 302 7.41e-40 144
MsG0680035080.01.T01 MTR_6g009350 41.709 199 92 6 172 357 8 195 1.02e-38 138
MsG0680035080.01.T01 MTR_5g037190 36.194 268 127 10 13 263 10 250 1.98e-37 136
MsG0680035080.01.T01 MTR_3g018750 37.805 246 122 9 171 392 2 240 2.98e-35 130
MsG0680035080.01.T01 MTR_1g115205 38.000 250 109 8 12 250 22 236 5.14e-35 130
MsG0680035080.01.T01 MTR_5g066420 48.485 132 65 3 253 382 19 149 2.77e-32 119
MsG0680035080.01.T01 MTR_5g096920 44.737 152 77 5 244 391 2 150 9.24e-30 112
MsG0680035080.01.T01 MTR_7g101200 35.683 227 101 11 136 351 36 228 7.10e-29 113
MsG0680035080.01.T01 MTR_5g096070 44.253 174 59 7 12 180 19 159 3.29e-28 108
MsG0680035080.01.T01 MTR_6g079730 46.667 135 68 3 256 388 13 145 2.46e-27 106
MsG0680035080.01.T01 MTR_7g017150 39.487 195 103 7 208 392 77 266 1.07e-26 108
MsG0680035080.01.T01 MTR_7g017120 40.000 195 102 8 208 392 76 265 3.22e-26 106
MsG0680035080.01.T01 MTR_3g030620 41.358 162 82 6 241 391 21 180 3.53e-26 104
MsG0680035080.01.T01 MTR_3g019290 37.864 206 88 8 16 219 11 178 1.71e-25 102
MsG0680035080.01.T01 MTR_5g097540 43.165 139 72 4 213 349 97 230 2.03e-25 105
MsG0680035080.01.T01 MTR_5g097660 50.000 114 54 3 278 389 4 116 2.94e-25 99.8
MsG0680035080.01.T01 MTR_5g091150 33.333 222 84 9 103 299 2 184 5.14e-24 99.0
MsG0680035080.01.T01 MTR_5g097650 41.509 159 69 6 11 161 13 155 1.54e-23 96.3
MsG0680035080.01.T01 MTR_2g022020 41.525 118 67 2 272 389 1 116 1.16e-22 92.4
MsG0680035080.01.T01 MTR_5g036250 48.980 98 50 0 303 400 21 118 1.28e-22 94.7
MsG0680035080.01.T01 MTR_3g034160 28.079 406 227 19 13 391 3 370 2.64e-22 97.8
MsG0680035080.01.T01 MTR_4g021785 27.114 402 206 18 18 391 8 350 2.96e-22 97.4
MsG0680035080.01.T01 MTR_5g086780 46.296 108 54 2 259 366 121 224 3.06e-22 94.7
MsG0680035080.01.T01 MTR_5g086780 55.696 79 30 2 5 83 3 76 2.16e-14 72.4
MsG0680035080.01.T01 MTR_2g028130 24.930 357 203 12 15 339 1 324 1.14e-21 96.3
MsG0680035080.01.T01 MTR_3g047580 39.597 149 61 5 9 152 3 127 2.63e-21 89.4
MsG0680035080.01.T01 MTR_5g096050 44.037 109 45 2 244 337 2 109 2.67e-21 89.0
MsG0680035080.01.T01 MTR_4g094365 28.250 400 216 23 18 391 7 361 3.69e-21 94.4
MsG0680035080.01.T01 MTR_2g021150 27.887 355 211 16 19 361 14 335 4.38e-21 94.4
MsG0680035080.01.T01 MTR_4g023090 26.536 407 234 18 13 391 10 379 5.76e-21 94.0
MsG0680035080.01.T01 MTR_4g116330 26.329 395 239 16 13 391 17 375 8.68e-21 93.6
MsG0680035080.01.T01 MTR_0129s0110 58.442 77 15 1 77 153 1 60 1.03e-20 87.0
MsG0680035080.01.T01 MTR_1g047080 28.490 351 168 15 56 392 1 282 2.72e-20 90.5
MsG0680035080.01.T01 MTR_3g034180 27.407 405 231 20 13 391 117 484 3.03e-20 92.8
MsG0680035080.01.T01 MTR_2g028140 25.146 342 208 13 15 329 1 321 7.04e-20 91.3
MsG0680035080.01.T01 MTR_4g023080 27.068 399 219 18 13 391 3 349 7.93e-20 90.5
MsG0680035080.01.T01 MTR_3g034130 27.179 390 227 19 14 380 4 359 1.30e-19 90.1
MsG0680035080.01.T01 MTR_0667s0010 26.061 330 204 12 15 329 2 306 1.78e-19 90.1
MsG0680035080.01.T01 MTR_2g031720 24.731 372 223 17 19 367 6 343 8.29e-19 87.8
MsG0680035080.01.T01 MTR_2g028110 23.288 365 233 15 19 367 4 337 1.50e-18 87.0
MsG0680035080.01.T01 MTR_1g094210 25.387 323 182 13 19 329 57 332 2.21e-18 86.7
MsG0680035080.01.T01 MTR_1g094210 25.387 323 182 13 19 329 57 332 2.66e-18 86.7
MsG0680035080.01.T01 MTR_8g041440 44.144 111 37 3 11 114 7 99 5.09e-18 79.7
MsG0680035080.01.T01 MTR_4g023070 26.119 402 229 19 19 391 3 365 6.62e-18 85.1
MsG0680035080.01.T01 MTR_1g054725 26.154 325 196 12 17 329 18 310 2.80e-17 83.2
MsG0680035080.01.T01 MTR_4g023150 27.182 401 221 21 13 391 4 355 5.78e-17 82.0
MsG0680035080.01.T01 MTR_4g023120 26.119 402 229 19 19 391 3 365 9.08e-17 81.6
MsG0680035080.01.T01 MTR_0115s0020 25.199 377 213 15 18 357 9 353 1.15e-16 81.6
MsG0680035080.01.T01 MTR_1g097560 23.773 387 250 13 9 388 26 374 1.90e-16 80.5
MsG0680035080.01.T01 MTR_1g055135 26.382 398 222 16 18 387 12 366 2.69e-16 80.1
MsG0680035080.01.T01 MTR_1g050305 54.118 85 33 3 296 375 23 106 3.83e-16 75.5
MsG0680035080.01.T01 MTR_3g014540 24.507 355 228 14 19 366 29 350 4.56e-16 79.7
MsG0680035080.01.T01 MTR_3g103020 25.564 399 219 20 18 386 19 369 4.83e-16 79.3
MsG0680035080.01.T01 MTR_4g117780 25.201 373 213 11 19 369 11 339 4.95e-16 79.3
MsG0680035080.01.T01 MTR_4g116330 26.076 395 201 19 13 391 17 336 5.89e-16 79.0
MsG0680035080.01.T01 MTR_2g028160 24.709 344 203 15 15 329 1 317 1.10e-15 78.6
MsG0680035080.01.T01 MTR_4g117850 26.862 376 203 19 18 368 22 350 1.23e-15 78.2
MsG0680035080.01.T01 MTR_2g025420 26.197 355 199 17 19 339 6 331 1.80e-15 78.2
MsG0680035080.01.T01 MTR_2g024110 23.529 323 198 14 19 327 4 291 2.29e-15 77.4
MsG0680035080.01.T01 MTR_4g109280 28.804 368 207 16 17 370 6 332 2.57e-15 77.0
MsG0680035080.01.T01 MTR_3g010590 24.841 314 191 12 19 329 39 310 3.06e-15 77.0
MsG0680035080.01.T01 MTR_2g426020 22.796 329 217 9 15 329 2 307 3.81e-15 77.0
MsG0680035080.01.T01 MTR_4g023440 24.810 395 192 15 18 391 17 327 5.91e-15 75.9
MsG0680035080.01.T01 MTR_2g078900 24.765 319 194 12 19 329 33 313 6.30e-15 75.9
MsG0680035080.01.T01 MTR_2g426090 24.923 325 194 13 27 329 14 310 1.45e-14 75.1
MsG0680035080.01.T01 MTR_3g013740 26.346 353 190 18 6 329 31 342 1.67e-14 75.1
MsG0680035080.01.T01 MTR_2g021155 25.915 355 221 13 22 369 39 358 1.84e-14 75.9
MsG0680035080.01.T01 MTR_6g053260 25.507 345 195 18 5 329 322 624 2.30e-14 75.5
MsG0680035080.01.T01 MTR_3g009310 25.449 334 179 19 19 330 42 327 2.32e-14 74.7
MsG0680035080.01.T01 MTR_7g070440 27.151 372 214 19 19 364 7 347 2.52e-14 74.3
MsG0680035080.01.T01 MTR_2g029990 25.532 329 184 16 20 329 52 338 2.61e-14 74.3
MsG0680035080.01.T01 MTR_4g117770 27.368 380 198 16 18 369 10 339 2.73e-14 73.9
MsG0680035080.01.T01 MTR_4g117810 27.368 380 198 16 18 369 10 339 2.73e-14 73.9
MsG0680035080.01.T01 MTR_1g068875 21.833 371 236 15 19 372 4 337 2.82e-14 74.3
MsG0680035080.01.T01 MTR_3g030250 24.854 342 209 11 19 357 37 333 3.74e-14 73.9
MsG0680035080.01.T01 MTR_3g036335 22.841 359 221 14 19 364 41 356 3.79e-14 73.9
MsG0680035080.01.T01 MTR_0064s0160 25.000 364 237 12 18 360 41 389 5.16e-14 73.6
MsG0680035080.01.T01 MTR_4g094400 40.000 105 44 3 241 327 8 111 8.80e-14 68.2
MsG0680035080.01.T01 MTR_3g013770 25.749 334 182 15 19 329 33 323 1.05e-13 72.4
MsG0680035080.01.T01 MTR_4g023200 26.509 381 209 21 33 391 24 355 1.31e-13 72.0
MsG0680035080.01.T01 MTR_3g014570 23.511 319 206 11 19 330 29 316 2.12e-13 71.6
MsG0680035080.01.T01 MTR_5g011200 26.524 328 185 18 19 329 17 305 2.39e-13 71.2
MsG0680035080.01.T01 MTR_3g006670 24.852 338 212 12 1 329 32 336 4.55e-13 70.9
MsG0680035080.01.T01 MTR_3g097190 55.556 54 24 0 314 367 28 81 6.08e-13 67.4
MsG0680035080.01.T01 MTR_2g031680 22.995 374 226 17 15 366 2 335 8.09e-13 69.7
MsG0680035080.01.T01 MTR_2g046920 25.298 336 181 16 19 333 24 310 1.02e-12 69.3
MsG0680035080.01.T01 MTR_4g117750 27.778 396 215 18 19 389 3 352 1.05e-12 69.7
MsG0680035080.01.T01 MTR_6g060650 27.778 378 230 15 13 374 2 352 1.37e-12 68.9
MsG0680035080.01.T01 MTR_3g006530 23.077 351 225 16 19 359 40 355 1.72e-12 68.9
MsG0680035080.01.T01 MTR_2g055970 24.438 356 215 16 11 354 203 516 1.86e-12 69.3
MsG0680035080.01.T01 MTR_1g023400 23.978 367 224 14 22 371 6 334 2.06e-12 68.2
MsG0680035080.01.T01 MTR_8g102520 28.571 245 141 9 141 373 75 297 2.22e-12 67.8
MsG0680035080.01.T01 MTR_3g030240 23.718 312 194 12 19 329 40 308 2.86e-12 68.2
MsG0680035080.01.T01 MTR_4g109270 24.297 391 239 18 19 391 8 359 4.03e-12 67.4
MsG0680035080.01.T01 MTR_4g023130 26.596 282 154 13 128 391 62 308 6.18e-12 66.6
MsG0680035080.01.T01 MTR_7g056710 23.018 391 184 17 18 355 22 348 7.01e-12 67.0
MsG0680035080.01.T01 MTR_6g053240 24.224 322 204 13 19 329 28 320 9.05e-12 66.6
MsG0680035080.01.T01 MTR_5g070088 24.331 411 246 17 14 391 2 380 9.09e-12 66.6
MsG0680035080.01.T01 MTR_3g047540 43.077 65 35 1 211 273 4 68 1.19e-11 60.8
MsG0680035080.01.T01 MTR_3g010430 23.242 327 191 12 19 327 36 320 1.31e-11 66.2
MsG0680035080.01.T01 MTR_5g094360 41.860 86 46 3 148 231 40 123 1.32e-11 62.8
MsG0680035080.01.T01 MTR_7g062060 24.277 346 204 12 19 330 12 333 1.35e-11 66.2
MsG0680035080.01.T01 MTR_3g010520 22.438 361 226 11 1 357 3 313 1.46e-11 65.9
MsG0680035080.01.T01 MTR_1g097490 23.760 383 252 15 11 387 41 389 1.84e-11 65.5
MsG0680035080.01.T01 MTR_5g097730 51.923 52 25 0 303 354 2 53 1.89e-11 59.3
MsG0680035080.01.T01 MTR_6g021880 26.183 317 186 15 30 329 31 316 1.91e-11 65.5
MsG0680035080.01.T01 MTR_4g030090 23.464 358 193 12 20 339 15 329 2.43e-11 65.5
MsG0680035080.01.T01 MTR_4g116340 27.897 233 124 9 22 249 39 232 2.72e-11 63.9
MsG0680035080.01.T01 MTR_2g026010 25.444 338 183 16 18 329 3 297 4.05e-11 64.7
MsG0680035080.01.T01 MTR_4g024890 22.302 417 216 17 20 385 11 370 4.24e-11 64.3
MsG0680035080.01.T01 MTR_8g099460 24.012 329 200 14 19 329 5 301 4.31e-11 64.7
MsG0680035080.01.T01 MTR_0760s0010 24.351 308 180 11 27 325 55 318 4.54e-11 64.3
MsG0680035080.01.T01 MTR_1g050542 23.706 367 208 15 19 366 58 371 7.25e-11 63.9
MsG0680035080.01.T01 MTR_8g041490 33.333 129 51 4 9 130 5 105 8.28e-11 59.3
MsG0680035080.01.T01 MTR_5g070080 25.123 406 250 20 18 397 9 386 9.28e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035080.01.T01 AT3G16210 25.237 317 181 12 15 326 1 266 4.38e-15 76.6
MsG0680035080.01.T01 AT3G06240 22.139 402 226 15 19 371 36 399 9.86e-13 69.7
MsG0680035080.01.T01 AT2G16810 27.206 272 163 12 15 278 37 281 3.68e-12 67.0
MsG0680035080.01.T01 AT3G10240 26.774 310 170 16 19 308 27 299 1.27e-11 66.2
MsG0680035080.01.T01 AT2G40920 26.838 272 154 12 22 277 57 299 2.80e-11 65.5
MsG0680035080.01.T01 AT4G19930 29.323 266 145 15 18 265 42 282 2.94e-11 65.1
MsG0680035080.01.T01 AT5G62510 26.646 319 187 13 15 324 40 320 8.81e-11 63.5
MsG0680035080.01.T01 AT2G40920 26.766 269 152 12 25 277 1 240 8.82e-11 63.5

Find 83 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATATGTGCATGATTATTT+TGG 0.163226 6:-98585499 MsG0680035080.01.T01:CDS
TAATGAAGGTTTATATATAT+TGG 0.225280 6:-98585980 MsG0680035080.01.T01:CDS
TAATACCGAAAATTACAATT+TGG 0.246596 6:-98585915 MsG0680035080.01.T01:CDS
CGGTACATGTTCATGAAATA+AGG 0.266070 6:+98586162 None:intergenic
TCACTTTCAAAATCAGTTAG+AGG 0.294003 6:+98585739 None:intergenic
AAACCTTCATTATCTTGAAT+TGG 0.325770 6:+98585991 None:intergenic
AGATCCTTGGACAGCTAAAA+AGG 0.327524 6:-98586298 MsG0680035080.01.T01:CDS
GATTGTGTTGACTATCCTAT+TGG 0.348014 6:-98585322 MsG0680035080.01.T01:CDS
CCTATTGGAGGAGGGAATAA+AGG 0.355501 6:-98585307 MsG0680035080.01.T01:CDS
TGGCGAGAAATTCGAGAATA+AGG 0.358195 6:-98586034 MsG0680035080.01.T01:CDS
AATCGAATCAAAGATTTAAG+AGG 0.360839 6:+98586225 None:intergenic
GGCGGGGACTCGAGAGGACT+TGG 0.372792 6:+98585859 None:intergenic
CCTTTATTCCCTCCTCCAAT+AGG 0.374347 6:+98585307 None:intergenic
AAAATAATCATGCACATATG+AGG 0.376826 6:+98585501 None:intergenic
ATCTGTCTCAAGTGAATCTA+AGG 0.377272 6:+98586086 None:intergenic
CCTTCATTATCTTGAATTGG+AGG 0.401203 6:+98585994 None:intergenic
TGGACTAAACTCTTTGTTGT+TGG 0.407257 6:-98585352 MsG0680035080.01.T01:CDS
CGACATGTTGAATTACCTTA+AGG 0.410137 6:+98585773 None:intergenic
AGAATAAGGTCAAATTAGAT+TGG 0.411158 6:-98586020 MsG0680035080.01.T01:CDS
TATATCAAATGATGGAGAAC+TGG 0.423083 6:-98585272 MsG0680035080.01.T01:CDS
CCTACCGGCTATTATCCTTC+AGG 0.433833 6:-98585628 MsG0680035080.01.T01:CDS
TCATAAGGAAGTCCTTCTTC+CGG 0.446347 6:-98585176 MsG0680035080.01.T01:CDS
GGTACATGTTCATGAAATAA+GGG 0.455150 6:+98586163 None:intergenic
ATGGAGAATGTAAAATCATC+AGG 0.464376 6:+98586261 None:intergenic
TATTACGATACTCTTTCATA+AGG 0.465533 6:-98585191 MsG0680035080.01.T01:CDS
GGGGACTCGAGAGGACTTGG+AGG 0.470344 6:+98585862 None:intergenic
GGCTATTATCCTTCAGGTAT+CGG 0.475576 6:-98585622 MsG0680035080.01.T01:CDS
AATTGAAATCGACAGATCCT+TGG 0.476621 6:-98586311 MsG0680035080.01.T01:CDS
TTATTCCTCCAACCGGAAGA+AGG 0.483635 6:+98585164 None:intergenic
CCTTAAGGTCATTTCTAACA+TGG 0.484592 6:+98585788 None:intergenic
ATATTCTTTATATCAAATGA+TGG 0.485006 6:-98585280 MsG0680035080.01.T01:CDS
CACTTTCATAAGAAGGTGGC+GGG 0.489349 6:+98585842 None:intergenic
GGATAGTCAACACAATCTAA+TGG 0.489413 6:+98585328 None:intergenic
CAAATGATGGAGAACTGGTT+CGG 0.490236 6:-98585267 MsG0680035080.01.T01:CDS
CCTCCAATTCAAGATAATGA+AGG 0.493404 6:-98585994 MsG0680035080.01.T01:CDS
ATCATGCACATATGAGGGTA+GGG 0.494550 6:+98585507 None:intergenic
CGTAACTACCAAGGAATTCA+AGG 0.496567 6:-98585890 MsG0680035080.01.T01:CDS
CCATGTTAGAAATGACCTTA+AGG 0.497271 6:-98585788 MsG0680035080.01.T01:CDS
AACATAACACTTTCATAAGA+AGG 0.498338 6:+98585835 None:intergenic
AGGAAGGACCTTGAATTCCT+TGG 0.499731 6:+98585882 None:intergenic
GGTATCGGAATACACACAAA+TGG 0.507705 6:-98585607 MsG0680035080.01.T01:CDS
TTAAATGTGTACGTAAATCA+TGG 0.518948 6:-98586203 MsG0680035080.01.T01:CDS
AACTCGGTGTGAAAGAATCA+TGG 0.523056 6:-98585372 MsG0680035080.01.T01:CDS
GAAGTCCTTCTTCCGGTTGG+AGG 0.524224 6:-98585169 MsG0680035080.01.T01:CDS
ACACAAATGGAGTGTGTCAT+TGG 0.525343 6:-98585594 MsG0680035080.01.T01:CDS
TGTGTTGACTATCCTATTGG+AGG 0.532088 6:-98585319 MsG0680035080.01.T01:CDS
GGATGGATTTGATGATTGCA+TGG 0.537721 6:-98585569 MsG0680035080.01.T01:CDS
AAGGAAGTCCTTCTTCCGGT+TGG 0.538367 6:-98585172 MsG0680035080.01.T01:CDS
TCATTATCTTGAATTGGAGG+TGG 0.539264 6:+98585997 None:intergenic
ATCAGTTAGAGGCATACAAT+GGG 0.543981 6:+98585750 None:intergenic
TGTATTGGTGGATAGACGAT+TGG 0.547265 6:-98585473 MsG0680035080.01.T01:CDS
AATCATGCACATATGAGGGT+AGG 0.548656 6:+98585506 None:intergenic
GTTGACTATCCTATTGGAGG+AGG 0.550265 6:-98585316 MsG0680035080.01.T01:CDS
ACTCGAGAGGACTTGGAGGA+AGG 0.556210 6:+98585866 None:intergenic
GGCACTATTTGTTTCTACCA+AGG 0.558987 6:-98585943 MsG0680035080.01.T01:CDS
GTGTGTATTCCGATACCTGA+AGG 0.563897 6:+98585613 None:intergenic
GGAGTGTGTCATTGGTGGGA+TGG 0.567100 6:-98585586 MsG0680035080.01.T01:CDS
ACAGCTTAAGAAGTAACTCA+TGG 0.568819 6:-98585672 MsG0680035080.01.T01:CDS
AATCAGTTAGAGGCATACAA+TGG 0.581813 6:+98585749 None:intergenic
ATAGCTTGAGATAAAAGCAA+CGG 0.585165 6:+98585435 None:intergenic
ACACTTTCATAAGAAGGTGG+CGG 0.586857 6:+98585841 None:intergenic
AAATAATCATGCACATATGA+GGG 0.592977 6:+98585502 None:intergenic
GAAGGTGGCGGGGACTCGAG+AGG 0.611417 6:+98585853 None:intergenic
TGTTCTACAGAATATATCGC+TGG 0.613426 6:+98585531 None:intergenic
ATATTGGATTATGTTGCTGA+TGG 0.614293 6:-98585964 MsG0680035080.01.T01:CDS
GATACCTGAAGGATAATAGC+CGG 0.614619 6:+98585624 None:intergenic
CAGCTTAAGAAGTAACTCAT+GGG 0.615448 6:-98585671 MsG0680035080.01.T01:CDS
TCATGCACATATGAGGGTAG+GGG 0.621503 6:+98585508 None:intergenic
CAAATGGAGTGTGTCATTGG+TGG 0.626602 6:-98585591 MsG0680035080.01.T01:CDS
CTTGATGTAGATATACCTAC+CGG 0.629736 6:-98585643 MsG0680035080.01.T01:CDS
TTGACTATCCTATTGGAGGA+GGG 0.632446 6:-98585315 MsG0680035080.01.T01:CDS
AAATGGAGTGTGTCATTGGT+GGG 0.648608 6:-98585590 MsG0680035080.01.T01:CDS
CCTGAAGGATAATAGCCGGT+AGG 0.654322 6:+98585628 None:intergenic
TATTAGATGCAAAATTGAGG+CGG 0.657699 6:+98586142 None:intergenic
TACCACCACATGACTCCATG+TGG 0.658383 6:-98585702 MsG0680035080.01.T01:CDS
ACCTCCCACATGGAGTCATG+TGG 0.659915 6:+98585697 None:intergenic
ATAACACTTTCATAAGAAGG+TGG 0.660903 6:+98585838 None:intergenic
TCCCACATGGAGTCATGTGG+TGG 0.661179 6:+98585700 None:intergenic
AATTTGGAACGTAACTACCA+AGG 0.667394 6:-98585899 MsG0680035080.01.T01:CDS
ACCACCACATGACTCCATGT+GGG 0.677409 6:-98585701 MsG0680035080.01.T01:CDS
ACCACATGACTCCATGTGGG+AGG 0.683230 6:-98585698 MsG0680035080.01.T01:CDS
ACTTTCATAAGAAGGTGGCG+GGG 0.686093 6:+98585843 None:intergenic
TAAGCTGTATACCTCCCACA+TGG 0.711141 6:+98585687 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCTTTATATCAAATGA+TGG - Chr6:98586170-98586189 MsG0680035080.01.T01:CDS 15.0%
!! TAATAAAAATTACTCTTATG+TGG - Chr6:98585326-98585345 MsG0680035080.01.T01:CDS 15.0%
!! TAATGAAGGTTTATATATAT+TGG - Chr6:98585470-98585489 MsG0680035080.01.T01:CDS 15.0%
!! TAATACCGAAAATTACAATT+TGG - Chr6:98585535-98585554 MsG0680035080.01.T01:CDS 20.0%
!!! AGTTTTCACATATCAATTTT+AGG - Chr6:98586053-98586072 MsG0680035080.01.T01:CDS 20.0%
!!! TGATTATTTTGGTTTTGTAT+TGG - Chr6:98585962-98585981 MsG0680035080.01.T01:CDS 20.0%
!!! TTTTATTAGATGCAAAATTG+AGG + Chr6:98585314-98585333 None:intergenic 20.0%
! AAAATAATCATGCACATATG+AGG + Chr6:98585952-98585971 None:intergenic 25.0%
! AAACCTTCATTATCTTGAAT+TGG + Chr6:98585462-98585481 None:intergenic 25.0%
! AAATAATCATGCACATATGA+GGG + Chr6:98585951-98585970 None:intergenic 25.0%
! AACATAACACTTTCATAAGA+AGG + Chr6:98585618-98585637 None:intergenic 25.0%
! AATCGAATCAAAGATTTAAG+AGG + Chr6:98585228-98585247 None:intergenic 25.0%
! AGAATAAGGTCAAATTAGAT+TGG - Chr6:98585430-98585449 MsG0680035080.01.T01:CDS 25.0%
! TATTACGATACTCTTTCATA+AGG - Chr6:98586259-98586278 MsG0680035080.01.T01:CDS 25.0%
! TTAAATGTGTACGTAAATCA+TGG - Chr6:98585247-98585266 MsG0680035080.01.T01:CDS 25.0%
!! ACGTTCCAAATTGTAATTTT+CGG + Chr6:98585543-98585562 None:intergenic 25.0%
!! TCATATGTGCATGATTATTT+TGG - Chr6:98585951-98585970 MsG0680035080.01.T01:CDS 25.0%
!!! ATATCAATTTTAGGTGAACT+CGG - Chr6:98586062-98586081 MsG0680035080.01.T01:CDS 25.0%
!!! TTATTTTGGTTTTGTATTGG+TGG - Chr6:98585965-98585984 MsG0680035080.01.T01:CDS 25.0%
ATAACACTTTCATAAGAAGG+TGG + Chr6:98585615-98585634 None:intergenic 30.0%
ATAGCTTGAGATAAAAGCAA+CGG + Chr6:98586018-98586037 None:intergenic 30.0%
ATATTGGATTATGTTGCTGA+TGG - Chr6:98585486-98585505 MsG0680035080.01.T01:CDS 30.0%
ATGGAGAATGTAAAATCATC+AGG + Chr6:98585192-98585211 None:intergenic 30.0%
GGTACATGTTCATGAAATAA+GGG + Chr6:98585290-98585309 None:intergenic 30.0%
TATTAGATGCAAAATTGAGG+CGG + Chr6:98585311-98585330 None:intergenic 30.0%
TCACTTTCAAAATCAGTTAG+AGG + Chr6:98585714-98585733 None:intergenic 30.0%
! AGTGTTATGTTTTCACTTCA+TGG - Chr6:98585627-98585646 MsG0680035080.01.T01:CDS 30.0%
! ATGTTTTCACTTCATGGATT+TGG - Chr6:98585633-98585652 MsG0680035080.01.T01:CDS 30.0%
! TATATCAAATGATGGAGAAC+TGG - Chr6:98586178-98586197 MsG0680035080.01.T01:CDS 30.0%
! TTTTCGGTATTATCAAACCT+TGG + Chr6:98585527-98585546 None:intergenic 30.0%
!! AAGAGGCAATTTTGATAGAA+TGG + Chr6:98585211-98585230 None:intergenic 30.0%
AATTGAAATCGACAGATCCT+TGG - Chr6:98585139-98585158 MsG0680035080.01.T01:CDS 35.0%
ACAGCTTAAGAAGTAACTCA+TGG - Chr6:98585778-98585797 MsG0680035080.01.T01:CDS 35.0%
ATCTGTCTCAAGTGAATCTA+AGG + Chr6:98585367-98585386 None:intergenic 35.0%
CAGCTTAAGAAGTAACTCAT+GGG - Chr6:98585779-98585798 MsG0680035080.01.T01:CDS 35.0%
CCATGTTAGAAATGACCTTA+AGG - Chr6:98585662-98585681 MsG0680035080.01.T01:CDS 35.0%
CCTCCAATTCAAGATAATGA+AGG - Chr6:98585456-98585475 MsG0680035080.01.T01:CDS 35.0%
CCTTAAGGTCATTTCTAACA+TGG + Chr6:98585665-98585684 None:intergenic 35.0%
CCTTCATTATCTTGAATTGG+AGG + Chr6:98585459-98585478 None:intergenic 35.0%
CGACATGTTGAATTACCTTA+AGG + Chr6:98585680-98585699 None:intergenic 35.0%
CGGTACATGTTCATGAAATA+AGG + Chr6:98585291-98585310 None:intergenic 35.0%
CTTGATGTAGATATACCTAC+CGG - Chr6:98585807-98585826 MsG0680035080.01.T01:CDS 35.0%
GGATAGTCAACACAATCTAA+TGG + Chr6:98586125-98586144 None:intergenic 35.0%
TCATTATCTTGAATTGGAGG+TGG + Chr6:98585456-98585475 None:intergenic 35.0%
TGTTCTACAGAATATATCGC+TGG + Chr6:98585922-98585941 None:intergenic 35.0%
! AATCAGTTAGAGGCATACAA+TGG + Chr6:98585704-98585723 None:intergenic 35.0%
! AATTTGGAACGTAACTACCA+AGG - Chr6:98585551-98585570 MsG0680035080.01.T01:CDS 35.0%
! ATCAGTTAGAGGCATACAAT+GGG + Chr6:98585703-98585722 None:intergenic 35.0%
! TGGACTAAACTCTTTGTTGT+TGG - Chr6:98586098-98586117 MsG0680035080.01.T01:CDS 35.0%
!! ACACTTTTTATTCCTCCAAC+CGG + Chr6:98586296-98586315 None:intergenic 35.0%
!! GATTGTGTTGACTATCCTAT+TGG - Chr6:98586128-98586147 MsG0680035080.01.T01:CDS 35.0%
AATCATGCACATATGAGGGT+AGG + Chr6:98585947-98585966 None:intergenic 40.0%
ACACAAATGGAGTGTGTCAT+TGG - Chr6:98585856-98585875 MsG0680035080.01.T01:CDS 40.0%
ACACTTTCATAAGAAGGTGG+CGG + Chr6:98585612-98585631 None:intergenic 40.0%
AGATCCTTGGACAGCTAAAA+AGG - Chr6:98585152-98585171 MsG0680035080.01.T01:CDS 40.0%
ATCATGCACATATGAGGGTA+GGG + Chr6:98585946-98585965 None:intergenic 40.0%
CGTAACTACCAAGGAATTCA+AGG - Chr6:98585560-98585579 MsG0680035080.01.T01:CDS 40.0%
GATACCTGAAGGATAATAGC+CGG + Chr6:98585829-98585848 None:intergenic 40.0%
GGCTATTATCCTTCAGGTAT+CGG - Chr6:98585828-98585847 MsG0680035080.01.T01:CDS 40.0%
TCATAAGGAAGTCCTTCTTC+CGG - Chr6:98586274-98586293 MsG0680035080.01.T01:CDS 40.0%
TGGCGAGAAATTCGAGAATA+AGG - Chr6:98585416-98585435 MsG0680035080.01.T01:CDS 40.0%
TTGACTATCCTATTGGAGGA+GGG - Chr6:98586135-98586154 MsG0680035080.01.T01:CDS 40.0%
! AAATGGAGTGTGTCATTGGT+GGG - Chr6:98585860-98585879 MsG0680035080.01.T01:CDS 40.0%
! CAAATGATGGAGAACTGGTT+CGG - Chr6:98586183-98586202 MsG0680035080.01.T01:CDS 40.0%
! GATGCGATGTTTTCTCTTTC+TGG - Chr6:98585396-98585415 MsG0680035080.01.T01:CDS 40.0%
! GGATGGATTTGATGATTGCA+TGG - Chr6:98585881-98585900 MsG0680035080.01.T01:CDS 40.0%
! GGTATCGGAATACACACAAA+TGG - Chr6:98585843-98585862 MsG0680035080.01.T01:CDS 40.0%
! TGTATTGGTGGATAGACGAT+TGG - Chr6:98585977-98585996 MsG0680035080.01.T01:CDS 40.0%
!! AACTCGGTGTGAAAGAATCA+TGG - Chr6:98586078-98586097 MsG0680035080.01.T01:CDS 40.0%
!! GGCACTATTTGTTTCTACCA+AGG - Chr6:98585507-98585526 MsG0680035080.01.T01:CDS 40.0%
!! TGTGTTGACTATCCTATTGG+AGG - Chr6:98586131-98586150 MsG0680035080.01.T01:CDS 40.0%
!!! CTAACCTTTTTAGCTGTCCA+AGG + Chr6:98585159-98585178 None:intergenic 40.0%
ACTTTCATAAGAAGGTGGCG+GGG + Chr6:98585610-98585629 None:intergenic 45.0%
AGGAAGGACCTTGAATTCCT+TGG + Chr6:98585571-98585590 None:intergenic 45.0%
CACTTTCATAAGAAGGTGGC+GGG + Chr6:98585611-98585630 None:intergenic 45.0%
CCTATTGGAGGAGGGAATAA+AGG - Chr6:98586143-98586162 MsG0680035080.01.T01:CDS 45.0%
CCTTTATTCCCTCCTCCAAT+AGG + Chr6:98586146-98586165 None:intergenic 45.0%
GTGTGTATTCCGATACCTGA+AGG + Chr6:98585840-98585859 None:intergenic 45.0%
GTTGACTATCCTATTGGAGG+AGG - Chr6:98586134-98586153 MsG0680035080.01.T01:CDS 45.0%
TAAGCTGTATACCTCCCACA+TGG + Chr6:98585766-98585785 None:intergenic 45.0%
TCATGCACATATGAGGGTAG+GGG + Chr6:98585945-98585964 None:intergenic 45.0%
TTATTCCTCCAACCGGAAGA+AGG + Chr6:98586289-98586308 None:intergenic 45.0%
! CAAATGGAGTGTGTCATTGG+TGG - Chr6:98585859-98585878 MsG0680035080.01.T01:CDS 45.0%
AAGGAAGTCCTTCTTCCGGT+TGG - Chr6:98586278-98586297 MsG0680035080.01.T01:CDS 50.0%
ACCACCACATGACTCCATGT+GGG - Chr6:98585749-98585768 MsG0680035080.01.T01:CDS 50.0%
CCTGAAGGATAATAGCCGGT+AGG + Chr6:98585825-98585844 None:intergenic 50.0%
TACCACCACATGACTCCATG+TGG - Chr6:98585748-98585767 MsG0680035080.01.T01:CDS 50.0%
! CCTACCGGCTATTATCCTTC+AGG - Chr6:98585822-98585841 MsG0680035080.01.T01:CDS 50.0%
ACCACATGACTCCATGTGGG+AGG - Chr6:98585752-98585771 MsG0680035080.01.T01:CDS 55.0%
ACCTCCCACATGGAGTCATG+TGG + Chr6:98585756-98585775 None:intergenic 55.0%
ACTCGAGAGGACTTGGAGGA+AGG + Chr6:98585587-98585606 None:intergenic 55.0%
GAAGTCCTTCTTCCGGTTGG+AGG - Chr6:98586281-98586300 MsG0680035080.01.T01:CDS 55.0%
TCCCACATGGAGTCATGTGG+TGG + Chr6:98585753-98585772 None:intergenic 55.0%
! GGAGTGTGTCATTGGTGGGA+TGG - Chr6:98585864-98585883 MsG0680035080.01.T01:CDS 55.0%
GGGGACTCGAGAGGACTTGG+AGG + Chr6:98585591-98585610 None:intergenic 65.0%
GGCGGGGACTCGAGAGGACT+TGG + Chr6:98585594-98585613 None:intergenic 70.0%
!! GAAGGTGGCGGGGACTCGAG+AGG + Chr6:98585600-98585619 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 98585132 98586340 98585132 ID=MsG0680035080.01;Name=MsG0680035080.01
Chr6 mRNA 98585132 98586340 98585132 ID=MsG0680035080.01.T01;Parent=MsG0680035080.01;Name=MsG0680035080.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|402
Chr6 exon 98585132 98586340 98585132 ID=MsG0680035080.01.T01:exon:14002;Parent=MsG0680035080.01.T01
Chr6 CDS 98585132 98586340 98585132 ID=MsG0680035080.01.T01:cds;Parent=MsG0680035080.01.T01
Gene Sequence

>MsG0680035080.01.T01

ATGGAGAAATTGAAATCGACAGATCCTTGGACAGCTAAAAAGGTTAGCAATCACATACCTGATGATTTTACATTCTCCATTCTATCAAAATTGCCTCTTAAATCTTTGATTCGATTTAAATGTGTACGTAAATCATGGTCTCTCTTGTTCGAAAACCCTTATTTCATGAACATGTACCGCCTCAATTTTGCATCTAATAAAAATTACTCTTATGTGGATAATTCATGTCTCGCCTTAGATTCACTTGAGACAGATATACAACGTGATGCGATGTTTTCTCTTTCTGGCGAGAAATTCGAGAATAAGGTCAAATTAGATTGGCCACCTCCAATTCAAGATAATGAAGGTTTATATATATTGGATTATGTTGCTGATGGCACTATTTGTTTCTACCAAGGTTTGATAATACCGAAAATTACAATTTGGAACGTAACTACCAAGGAATTCAAGGTCCTTCCTCCAAGTCCTCTCGAGTCCCCGCCACCTTCTTATGAAAGTGTTATGTTTTCACTTCATGGATTTGGCTATGACCATGTTAGAAATGACCTTAAGGTAATTCAACATGTCGCCCATTGTATGCCTCTAACTGATTTTGAAAGTGAAAGTTATATCTCATTACCACCACATGACTCCATGTGGGAGGTATACAGCTTAAGAAGTAACTCATGGGAGAAACTTGATGTAGATATACCTACCGGCTATTATCCTTCAGGTATCGGAATACACACAAATGGAGTGTGTCATTGGTGGGATGGATTTGATGATTGCATGGTGTCATTTGACTTGACCAGCGATATATTCTGTAGAACACCCCTACCCTCATATGTGCATGATTATTTTGGTTTTGTATTGGTGGATAGACGATTGGTGACATTAAATGAATCCGTTGCTTTTATCTCAAGCTATGAAAATAAGTCAACAAGTTTTCACATATCAATTTTAGGTGAACTCGGTGTGAAAGAATCATGGACTAAACTCTTTGTTGTTGGACCATTAGATTGTGTTGACTATCCTATTGGAGGAGGGAATAAAGGTGATATATTCTTTATATCAAATGATGGAGAACTGGTTCGGTTTGATTTGAGTAAACAAATGATTGAGAATTATTGCATTCAAGATGCATTTTGTATTACGATACTCTTTCATAAGGAAGTCCTTCTTCCGGTTGGAGGAATAAAAAGTGTCAAAGCGTACGACAGTGATTATTAG
Protein sequence

>MsG0680035080.01.T01

MEKLKSTDPWTAKKVSNHIPDDFTFSILSKLPLKSLIRFKCVRKSWSLLFENPYFMNMYRLNFASNKNYSYVDNSCLALDSLETDIQRDAMFSLSGEKFENKVKLDWPPPIQDNEGLYILDYVADGTICFYQGLIIPKITIWNVTTKEFKVLPPSPLESPPPSYESVMFSLHGFGYDHVRNDLKVIQHVAHCMPLTDFESESYISLPPHDSMWEVYSLRSNSWEKLDVDIPTGYYPSGIGIHTNGVCHWWDGFDDCMVSFDLTSDIFCRTPLPSYVHDYFGFVLVDRRLVTLNESVAFISSYENKSTSFHISILGELGVKESWTKLFVVGPLDCVDYPIGGGNKGDIFFISNDGELVRFDLSKQMIENYCIQDAFCITILFHKEVLLPVGGIKSVKAYDSDY*