Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030113.01.T01 | RHN55246.1 | 82.315 | 311 | 37 | 4 | 49 | 350 | 1 | 302 | 1.81E-177 | 507 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030113.01.T01 | Q9LJC0 | 26.087 | 276 | 159 | 11 | 55 | 315 | 2 | 247 | 1.20E-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030113.01.T01 | A0A396HPH8 | 82.315 | 311 | 37 | 4 | 49 | 350 | 1 | 302 | 8.64e-178 | 507 |
MsG0580030113.01.T01 | G7K8D2 | 82.315 | 311 | 37 | 4 | 49 | 350 | 1 | 302 | 4.72e-177 | 508 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030113.01.T01 | MTR_5g037680 | 82.315 | 311 | 37 | 4 | 49 | 350 | 1 | 302 | 1.20e-180 | 508 |
MsG0580030113.01.T01 | MTR_5g059430 | 57.751 | 329 | 114 | 5 | 47 | 350 | 17 | 345 | 7.26e-125 | 365 |
MsG0580030113.01.T01 | MTR_5g069390 | 59.688 | 320 | 112 | 7 | 48 | 350 | 18 | 337 | 1.33e-121 | 360 |
MsG0580030113.01.T01 | MTR_5g097820 | 63.672 | 256 | 81 | 2 | 51 | 298 | 18 | 269 | 1.08e-111 | 326 |
MsG0580030113.01.T01 | MTR_7g017130 | 44.904 | 314 | 156 | 6 | 48 | 350 | 10 | 317 | 1.69e-81 | 254 |
MsG0580030113.01.T01 | MTR_7g017170 | 44.904 | 314 | 156 | 6 | 48 | 350 | 10 | 317 | 2.07e-81 | 254 |
MsG0580030113.01.T01 | MTR_5g096630 | 45.283 | 318 | 153 | 8 | 50 | 350 | 12 | 325 | 4.15e-79 | 248 |
MsG0580030113.01.T01 | MTR_8g012090 | 46.226 | 318 | 110 | 10 | 51 | 350 | 11 | 285 | 1.86e-77 | 241 |
MsG0580030113.01.T01 | MTR_5g097330 | 45.963 | 322 | 144 | 10 | 50 | 350 | 10 | 322 | 7.47e-77 | 242 |
MsG0580030113.01.T01 | MTR_4g102410 | 43.860 | 342 | 160 | 11 | 37 | 350 | 32 | 369 | 4.95e-75 | 238 |
MsG0580030113.01.T01 | MTR_2g038680 | 45.455 | 341 | 147 | 9 | 38 | 350 | 1 | 330 | 5.55e-75 | 237 |
MsG0580030113.01.T01 | MTR_8g063440 | 45.307 | 309 | 150 | 8 | 50 | 350 | 6 | 303 | 3.09e-74 | 234 |
MsG0580030113.01.T01 | MTR_5g097350 | 45.946 | 296 | 139 | 8 | 65 | 350 | 25 | 309 | 3.34e-74 | 234 |
MsG0580030113.01.T01 | MTR_6g086825 | 43.438 | 320 | 155 | 7 | 52 | 350 | 66 | 380 | 3.39e-73 | 234 |
MsG0580030113.01.T01 | MTR_5g096900 | 46.688 | 317 | 131 | 12 | 55 | 350 | 11 | 310 | 2.54e-72 | 228 |
MsG0580030113.01.T01 | MTR_2g022000 | 41.945 | 329 | 160 | 6 | 51 | 350 | 11 | 337 | 1.37e-71 | 229 |
MsG0580030113.01.T01 | MTR_7g017040 | 42.121 | 330 | 162 | 7 | 38 | 350 | 1 | 318 | 5.09e-70 | 224 |
MsG0580030113.01.T01 | MTR_6g090180 | 43.692 | 325 | 152 | 8 | 50 | 350 | 41 | 358 | 5.11e-70 | 225 |
MsG0580030113.01.T01 | MTR_4g055820 | 42.105 | 323 | 158 | 8 | 50 | 350 | 8 | 323 | 1.31e-69 | 222 |
MsG0580030113.01.T01 | MTR_2g021800 | 40.909 | 330 | 163 | 6 | 51 | 350 | 11 | 338 | 1.57e-69 | 223 |
MsG0580030113.01.T01 | MTR_5g096910 | 43.865 | 326 | 151 | 11 | 41 | 350 | 2 | 311 | 3.45e-69 | 222 |
MsG0580030113.01.T01 | MTR_0129s0070 | 43.396 | 318 | 151 | 10 | 50 | 350 | 11 | 316 | 2.22e-68 | 220 |
MsG0580030113.01.T01 | MTR_6g080680 | 41.791 | 335 | 153 | 9 | 38 | 350 | 1 | 315 | 1.22e-67 | 218 |
MsG0580030113.01.T01 | MTR_6g461660 | 42.991 | 321 | 151 | 9 | 50 | 350 | 13 | 321 | 1.31e-67 | 218 |
MsG0580030113.01.T01 | MTR_2g021770 | 43.976 | 332 | 145 | 15 | 50 | 350 | 6 | 327 | 1.54e-66 | 215 |
MsG0580030113.01.T01 | MTR_0054s0090 | 43.902 | 328 | 143 | 10 | 51 | 350 | 12 | 326 | 1.92e-66 | 215 |
MsG0580030113.01.T01 | MTR_7g016930 | 41.100 | 309 | 149 | 6 | 50 | 350 | 10 | 293 | 7.34e-66 | 211 |
MsG0580030113.01.T01 | MTR_2g021950 | 43.887 | 319 | 156 | 12 | 48 | 350 | 8 | 319 | 1.19e-65 | 213 |
MsG0580030113.01.T01 | MTR_0054s0100 | 42.249 | 329 | 149 | 9 | 51 | 350 | 12 | 328 | 1.30e-65 | 213 |
MsG0580030113.01.T01 | MTR_4g028510 | 44.099 | 322 | 146 | 13 | 52 | 350 | 12 | 322 | 1.67e-65 | 214 |
MsG0580030113.01.T01 | MTR_1g007410 | 43.218 | 317 | 155 | 10 | 51 | 350 | 17 | 325 | 1.84e-65 | 213 |
MsG0580030113.01.T01 | MTR_0129s0050 | 41.593 | 339 | 155 | 11 | 44 | 350 | 2 | 329 | 1.34e-64 | 210 |
MsG0580030113.01.T01 | MTR_0129s0120 | 42.138 | 318 | 155 | 10 | 50 | 350 | 11 | 316 | 1.38e-64 | 210 |
MsG0580030113.01.T01 | MTR_5g097680 | 40.346 | 347 | 154 | 10 | 50 | 350 | 11 | 350 | 6.22e-64 | 209 |
MsG0580030113.01.T01 | MTR_3g011120 | 42.056 | 321 | 144 | 15 | 47 | 350 | 5 | 300 | 7.57e-64 | 207 |
MsG0580030113.01.T01 | MTR_4g028680 | 44.828 | 319 | 146 | 11 | 52 | 350 | 12 | 320 | 8.20e-64 | 208 |
MsG0580030113.01.T01 | MTR_6g079810 | 43.030 | 330 | 145 | 11 | 52 | 350 | 66 | 383 | 8.93e-64 | 210 |
MsG0580030113.01.T01 | MTR_4g130330 | 42.500 | 320 | 153 | 10 | 51 | 350 | 2 | 310 | 2.75e-63 | 206 |
MsG0580030113.01.T01 | MTR_4g028660 | 42.320 | 319 | 153 | 11 | 52 | 350 | 12 | 319 | 1.08e-62 | 205 |
MsG0580030113.01.T01 | MTR_4g027450 | 42.320 | 319 | 153 | 11 | 52 | 350 | 12 | 319 | 1.08e-62 | 205 |
MsG0580030113.01.T01 | MTR_0134s0060 | 42.308 | 338 | 147 | 13 | 50 | 350 | 6 | 332 | 2.12e-62 | 205 |
MsG0580030113.01.T01 | MTR_5g024260 | 37.500 | 320 | 176 | 7 | 37 | 344 | 3 | 310 | 2.33e-62 | 204 |
MsG0580030113.01.T01 | MTR_8g046310 | 41.562 | 320 | 154 | 13 | 41 | 350 | 1 | 297 | 6.48e-62 | 202 |
MsG0580030113.01.T01 | MTR_4g117550 | 45.263 | 285 | 132 | 11 | 50 | 319 | 11 | 286 | 1.18e-61 | 202 |
MsG0580030113.01.T01 | MTR_2g104340 | 41.840 | 337 | 152 | 13 | 38 | 350 | 1 | 317 | 1.24e-61 | 202 |
MsG0580030113.01.T01 | MTR_7g069550 | 40.061 | 327 | 162 | 9 | 47 | 350 | 5 | 320 | 4.18e-61 | 201 |
MsG0580030113.01.T01 | MTR_4g028750 | 41.875 | 320 | 152 | 12 | 52 | 350 | 12 | 318 | 6.37e-61 | 201 |
MsG0580030113.01.T01 | MTR_6g079770 | 41.593 | 339 | 146 | 14 | 51 | 350 | 12 | 337 | 3.15e-60 | 199 |
MsG0580030113.01.T01 | MTR_8g041270 | 42.857 | 336 | 151 | 13 | 45 | 350 | 3 | 327 | 5.99e-60 | 198 |
MsG0580030113.01.T01 | MTR_7g111700 | 41.337 | 329 | 123 | 11 | 49 | 350 | 1 | 286 | 8.79e-60 | 197 |
MsG0580030113.01.T01 | MTR_2g104280 | 39.650 | 343 | 160 | 12 | 38 | 350 | 1 | 326 | 1.56e-59 | 197 |
MsG0580030113.01.T01 | MTR_8g013000 | 41.304 | 322 | 163 | 9 | 47 | 350 | 1 | 314 | 3.63e-59 | 196 |
MsG0580030113.01.T01 | MTR_7g079640 | 41.694 | 307 | 154 | 7 | 50 | 350 | 7 | 294 | 1.01e-58 | 194 |
MsG0580030113.01.T01 | MTR_8g464770 | 40.594 | 303 | 168 | 7 | 51 | 350 | 7 | 300 | 2.22e-58 | 193 |
MsG0580030113.01.T01 | MTR_5g072060 | 41.693 | 319 | 132 | 11 | 55 | 350 | 5 | 292 | 6.01e-58 | 198 |
MsG0580030113.01.T01 | MTR_1g007450 | 41.486 | 323 | 161 | 11 | 47 | 350 | 3 | 316 | 1.21e-57 | 192 |
MsG0580030113.01.T01 | MTR_2g066200 | 39.048 | 315 | 162 | 11 | 50 | 349 | 6 | 305 | 3.71e-57 | 191 |
MsG0580030113.01.T01 | MTR_2g034700 | 41.424 | 309 | 147 | 12 | 52 | 350 | 10 | 294 | 4.07e-57 | 190 |
MsG0580030113.01.T01 | MTR_2g066170 | 39.048 | 315 | 160 | 14 | 50 | 349 | 6 | 303 | 1.69e-55 | 186 |
MsG0580030113.01.T01 | MTR_8g039500 | 40.193 | 311 | 153 | 14 | 50 | 349 | 6 | 294 | 2.72e-55 | 184 |
MsG0580030113.01.T01 | MTR_5g097220 | 37.609 | 343 | 156 | 11 | 49 | 350 | 1 | 326 | 4.20e-55 | 186 |
MsG0580030113.01.T01 | MTR_2g064950 | 40.122 | 329 | 152 | 11 | 47 | 350 | 1 | 309 | 4.44e-55 | 185 |
MsG0580030113.01.T01 | MTR_0831s0010 | 37.612 | 335 | 177 | 12 | 29 | 350 | 26 | 341 | 1.52e-54 | 184 |
MsG0580030113.01.T01 | MTR_8g033140 | 39.942 | 343 | 142 | 13 | 52 | 350 | 15 | 337 | 3.20e-54 | 184 |
MsG0580030113.01.T01 | MTR_6g478230 | 39.394 | 330 | 152 | 13 | 48 | 350 | 19 | 327 | 9.51e-54 | 182 |
MsG0580030113.01.T01 | MTR_1g007430 | 41.391 | 302 | 137 | 11 | 67 | 350 | 7 | 286 | 5.56e-52 | 175 |
MsG0580030113.01.T01 | MTR_1g053510 | 38.623 | 334 | 148 | 15 | 54 | 350 | 13 | 326 | 8.25e-52 | 177 |
MsG0580030113.01.T01 | MTR_5g091140 | 37.574 | 338 | 157 | 11 | 38 | 350 | 27 | 335 | 2.47e-51 | 176 |
MsG0580030113.01.T01 | MTR_2g065860 | 36.825 | 315 | 169 | 10 | 50 | 349 | 6 | 305 | 5.67e-51 | 174 |
MsG0580030113.01.T01 | MTR_7g104710 | 39.936 | 313 | 134 | 14 | 50 | 345 | 11 | 286 | 1.40e-50 | 171 |
MsG0580030113.01.T01 | MTR_8g063330 | 36.050 | 319 | 169 | 10 | 52 | 350 | 10 | 313 | 4.68e-50 | 174 |
MsG0580030113.01.T01 | MTR_5g037190 | 38.610 | 259 | 137 | 4 | 48 | 300 | 8 | 250 | 1.43e-49 | 167 |
MsG0580030113.01.T01 | MTR_8g046200 | 35.135 | 370 | 151 | 11 | 41 | 350 | 1 | 341 | 4.29e-49 | 170 |
MsG0580030113.01.T01 | MTR_8g467670 | 37.540 | 309 | 160 | 13 | 54 | 350 | 12 | 299 | 9.55e-49 | 169 |
MsG0580030113.01.T01 | MTR_2g065840 | 34.700 | 317 | 172 | 9 | 50 | 349 | 6 | 304 | 1.18e-48 | 168 |
MsG0580030113.01.T01 | MTR_5g094350 | 37.586 | 290 | 129 | 9 | 54 | 315 | 11 | 276 | 1.71e-48 | 165 |
MsG0580030113.01.T01 | MTR_5g074850 | 39.474 | 342 | 139 | 17 | 50 | 350 | 29 | 343 | 2.36e-48 | 174 |
MsG0580030113.01.T01 | MTR_6g090250 | 38.720 | 328 | 138 | 14 | 74 | 350 | 29 | 344 | 7.29e-48 | 167 |
MsG0580030113.01.T01 | MTR_5g097650 | 56.667 | 150 | 50 | 2 | 55 | 204 | 21 | 155 | 1.16e-47 | 159 |
MsG0580030113.01.T01 | MTR_8g033110 | 37.389 | 337 | 162 | 10 | 52 | 350 | 10 | 335 | 1.37e-47 | 166 |
MsG0580030113.01.T01 | MTR_1g098180 | 34.740 | 308 | 158 | 8 | 46 | 350 | 9 | 276 | 6.87e-47 | 163 |
MsG0580030113.01.T01 | MTR_4g014370 | 35.714 | 336 | 170 | 11 | 50 | 350 | 5 | 329 | 1.26e-46 | 163 |
MsG0580030113.01.T01 | MTR_6g078010 | 40.502 | 279 | 121 | 11 | 93 | 350 | 1 | 255 | 1.68e-46 | 161 |
MsG0580030113.01.T01 | MTR_8g033090 | 36.202 | 337 | 164 | 12 | 52 | 350 | 10 | 333 | 9.71e-46 | 161 |
MsG0580030113.01.T01 | MTR_8g064890 | 36.280 | 328 | 171 | 14 | 41 | 350 | 1 | 308 | 1.78e-45 | 160 |
MsG0580030113.01.T01 | MTR_5g075370 | 38.372 | 344 | 143 | 19 | 49 | 349 | 1 | 318 | 1.31e-44 | 163 |
MsG0580030113.01.T01 | MTR_5g092850 | 37.576 | 330 | 153 | 12 | 52 | 350 | 12 | 319 | 2.04e-44 | 157 |
MsG0580030113.01.T01 | MTR_1g076810 | 41.850 | 227 | 117 | 7 | 50 | 270 | 12 | 229 | 9.34e-44 | 160 |
MsG0580030113.01.T01 | MTR_2g066150 | 35.599 | 309 | 152 | 12 | 50 | 349 | 6 | 276 | 4.02e-43 | 153 |
MsG0580030113.01.T01 | MTR_8g046220 | 34.421 | 337 | 159 | 12 | 52 | 350 | 13 | 325 | 1.27e-42 | 152 |
MsG0580030113.01.T01 | MTR_5g074800 | 38.710 | 279 | 134 | 10 | 95 | 350 | 1 | 265 | 1.64e-42 | 151 |
MsG0580030113.01.T01 | MTR_8g036970 | 36.184 | 304 | 119 | 12 | 60 | 350 | 2 | 243 | 2.56e-42 | 151 |
MsG0580030113.01.T01 | MTR_6g070880 | 38.912 | 239 | 112 | 8 | 51 | 264 | 27 | 256 | 2.57e-41 | 145 |
MsG0580030113.01.T01 | MTR_6g071420 | 38.912 | 239 | 112 | 8 | 51 | 264 | 27 | 256 | 2.57e-41 | 145 |
MsG0580030113.01.T01 | MTR_2g104260 | 39.576 | 283 | 132 | 11 | 50 | 306 | 8 | 277 | 4.96e-41 | 145 |
MsG0580030113.01.T01 | MTR_8g063370 | 32.919 | 322 | 185 | 10 | 39 | 350 | 9 | 309 | 5.18e-39 | 143 |
MsG0580030113.01.T01 | MTR_8g018110 | 36.986 | 292 | 141 | 10 | 52 | 312 | 10 | 289 | 8.69e-39 | 142 |
MsG0580030113.01.T01 | MTR_5g064700 | 36.271 | 295 | 145 | 11 | 95 | 350 | 1 | 291 | 4.77e-38 | 140 |
MsG0580030113.01.T01 | MTR_1g050308 | 38.136 | 236 | 126 | 8 | 35 | 265 | 17 | 237 | 9.57e-38 | 138 |
MsG0580030113.01.T01 | MTR_8g032980 | 33.048 | 351 | 162 | 12 | 52 | 350 | 12 | 341 | 1.04e-37 | 140 |
MsG0580030113.01.T01 | MTR_8g073570 | 41.573 | 178 | 96 | 3 | 47 | 224 | 1 | 170 | 2.58e-37 | 132 |
MsG0580030113.01.T01 | MTR_6g087620 | 41.702 | 235 | 93 | 9 | 133 | 350 | 1 | 208 | 3.07e-37 | 135 |
MsG0580030113.01.T01 | MTR_8g064790 | 33.439 | 314 | 148 | 11 | 41 | 350 | 1 | 257 | 6.02e-37 | 136 |
MsG0580030113.01.T01 | MTR_5g022850 | 32.000 | 325 | 141 | 6 | 47 | 350 | 7 | 272 | 3.05e-36 | 134 |
MsG0580030113.01.T01 | MTR_5g092860 | 33.993 | 303 | 146 | 12 | 74 | 350 | 20 | 294 | 5.65e-36 | 134 |
MsG0580030113.01.T01 | MTR_6g079790 | 39.056 | 233 | 103 | 9 | 152 | 350 | 2 | 229 | 1.14e-35 | 132 |
MsG0580030113.01.T01 | MTR_6g465360 | 43.367 | 196 | 83 | 8 | 50 | 228 | 56 | 240 | 2.40e-35 | 130 |
MsG0580030113.01.T01 | MTR_8g063310 | 31.153 | 321 | 178 | 14 | 51 | 350 | 17 | 315 | 5.68e-34 | 129 |
MsG0580030113.01.T01 | MTR_1g050312 | 38.532 | 218 | 109 | 8 | 133 | 349 | 16 | 209 | 1.90e-33 | 125 |
MsG0580030113.01.T01 | MTR_5g096070 | 40.625 | 192 | 68 | 6 | 32 | 220 | 10 | 158 | 2.24e-32 | 119 |
MsG0580030113.01.T01 | MTR_5g086590 | 38.983 | 177 | 91 | 4 | 181 | 350 | 13 | 179 | 2.53e-32 | 121 |
MsG0580030113.01.T01 | MTR_5g091150 | 39.631 | 217 | 76 | 8 | 145 | 338 | 2 | 186 | 3.34e-32 | 120 |
MsG0580030113.01.T01 | MTR_5g076490 | 36.207 | 290 | 119 | 14 | 93 | 350 | 1 | 256 | 1.34e-31 | 122 |
MsG0580030113.01.T01 | MTR_7g023800 | 36.101 | 277 | 110 | 10 | 95 | 350 | 1 | 231 | 4.96e-31 | 119 |
MsG0580030113.01.T01 | MTR_6g004450 | 47.333 | 150 | 64 | 5 | 210 | 350 | 46 | 189 | 3.37e-30 | 116 |
MsG0580030113.01.T01 | MTR_4g007940 | 34.286 | 245 | 132 | 9 | 129 | 350 | 24 | 262 | 8.85e-30 | 117 |
MsG0580030113.01.T01 | MTR_5g097540 | 35.606 | 264 | 95 | 10 | 93 | 350 | 1 | 195 | 1.94e-29 | 115 |
MsG0580030113.01.T01 | MTR_1g115205 | 33.091 | 275 | 105 | 11 | 42 | 284 | 10 | 237 | 1.24e-28 | 112 |
MsG0580030113.01.T01 | MTR_5g043605 | 35.371 | 229 | 122 | 10 | 134 | 350 | 45 | 259 | 2.65e-28 | 113 |
MsG0580030113.01.T01 | MTR_6g090260 | 54.054 | 111 | 41 | 3 | 247 | 350 | 75 | 182 | 1.07e-27 | 109 |
MsG0580030113.01.T01 | MTR_6g090260 | 53.704 | 54 | 25 | 0 | 52 | 105 | 16 | 69 | 2.77e-11 | 63.5 |
MsG0580030113.01.T01 | MTR_5g068490 | 35.238 | 210 | 117 | 8 | 142 | 350 | 8 | 199 | 2.84e-27 | 108 |
MsG0580030113.01.T01 | MTR_6g009350 | 42.581 | 155 | 68 | 6 | 210 | 350 | 5 | 152 | 1.14e-26 | 105 |
MsG0580030113.01.T01 | MTR_2g021920 | 44.375 | 160 | 66 | 6 | 213 | 350 | 37 | 195 | 2.22e-26 | 106 |
MsG0580030113.01.T01 | MTR_5g023970 | 50.000 | 112 | 47 | 3 | 244 | 350 | 8 | 115 | 2.61e-26 | 104 |
MsG0580030113.01.T01 | MTR_8g041440 | 52.525 | 99 | 24 | 1 | 55 | 153 | 14 | 89 | 1.37e-25 | 99.8 |
MsG0580030113.01.T01 | MTR_5g049560 | 45.270 | 148 | 68 | 5 | 93 | 228 | 1 | 147 | 1.76e-25 | 103 |
MsG0580030113.01.T01 | MTR_5g097850 | 36.946 | 203 | 71 | 5 | 159 | 350 | 10 | 166 | 4.58e-25 | 102 |
MsG0580030113.01.T01 | MTR_4g016000 | 38.764 | 178 | 77 | 6 | 186 | 350 | 2 | 160 | 5.99e-25 | 101 |
MsG0580030113.01.T01 | MTR_1g047080 | 32.794 | 247 | 131 | 10 | 93 | 331 | 1 | 220 | 7.06e-25 | 102 |
MsG0580030113.01.T01 | MTR_5g094360 | 45.082 | 122 | 58 | 2 | 186 | 298 | 35 | 156 | 7.15e-24 | 96.3 |
MsG0580030113.01.T01 | MTR_8g063350 | 29.167 | 312 | 146 | 15 | 54 | 350 | 12 | 263 | 3.16e-23 | 99.0 |
MsG0580030113.01.T01 | MTR_4g014370 | 42.537 | 134 | 72 | 4 | 42 | 174 | 8 | 137 | 3.15e-21 | 93.6 |
MsG0580030113.01.T01 | MTR_7g017150 | 48.113 | 106 | 52 | 2 | 247 | 350 | 82 | 186 | 3.37e-21 | 92.0 |
MsG0580030113.01.T01 | MTR_3g019290 | 34.450 | 209 | 84 | 7 | 55 | 253 | 13 | 178 | 4.48e-21 | 89.7 |
MsG0580030113.01.T01 | MTR_7g017120 | 47.170 | 106 | 53 | 2 | 247 | 350 | 81 | 185 | 1.11e-20 | 90.5 |
MsG0580030113.01.T01 | MTR_4g023090 | 26.690 | 281 | 170 | 7 | 41 | 313 | 1 | 253 | 1.06e-19 | 89.7 |
MsG0580030113.01.T01 | MTR_4g023080 | 28.622 | 283 | 155 | 10 | 50 | 323 | 3 | 247 | 7.83e-19 | 86.7 |
MsG0580030113.01.T01 | MTR_5g098950 | 38.068 | 176 | 72 | 8 | 183 | 350 | 90 | 236 | 1.99e-18 | 84.3 |
MsG0580030113.01.T01 | MTR_4g021785 | 27.599 | 279 | 154 | 9 | 55 | 323 | 8 | 248 | 1.44e-17 | 83.2 |
MsG0580030113.01.T01 | MTR_5g066420 | 55.000 | 80 | 31 | 2 | 276 | 350 | 1 | 80 | 3.31e-17 | 78.2 |
MsG0580030113.01.T01 | MTR_2g028130 | 23.701 | 308 | 201 | 11 | 53 | 342 | 2 | 293 | 2.00e-16 | 80.1 |
MsG0580030113.01.T01 | MTR_3g047580 | 32.414 | 145 | 70 | 3 | 52 | 195 | 10 | 127 | 2.52e-16 | 75.1 |
MsG0580030113.01.T01 | MTR_7g070440 | 28.920 | 287 | 143 | 13 | 53 | 315 | 4 | 253 | 3.87e-16 | 79.0 |
MsG0580030113.01.T01 | MTR_3g018750 | 33.129 | 163 | 77 | 5 | 213 | 350 | 3 | 158 | 4.30e-16 | 77.0 |
MsG0580030113.01.T01 | MTR_2g426060 | 24.194 | 310 | 193 | 13 | 56 | 344 | 6 | 294 | 4.81e-16 | 79.0 |
MsG0580030113.01.T01 | MTR_2g021150 | 26.117 | 291 | 189 | 12 | 56 | 342 | 14 | 282 | 9.37e-16 | 77.8 |
MsG0580030113.01.T01 | MTR_8g033000 | 29.615 | 260 | 125 | 11 | 139 | 350 | 34 | 283 | 1.94e-15 | 77.0 |
MsG0580030113.01.T01 | MTR_2g028160 | 25.000 | 324 | 177 | 15 | 54 | 342 | 3 | 295 | 2.88e-15 | 76.6 |
MsG0580030113.01.T01 | MTR_3g058440 | 28.030 | 264 | 147 | 13 | 54 | 302 | 33 | 268 | 4.11e-15 | 75.5 |
MsG0580030113.01.T01 | MTR_1g097560 | 29.310 | 290 | 164 | 13 | 55 | 340 | 35 | 287 | 6.74e-15 | 75.5 |
MsG0580030113.01.T01 | MTR_4g023380 | 24.735 | 283 | 164 | 6 | 41 | 316 | 1 | 241 | 7.66e-15 | 75.5 |
MsG0580030113.01.T01 | MTR_5g096920 | 52.000 | 75 | 32 | 2 | 276 | 350 | 1 | 71 | 1.14e-14 | 71.2 |
MsG0580030113.01.T01 | MTR_3g083010 | 24.611 | 321 | 196 | 13 | 56 | 350 | 6 | 306 | 1.27e-14 | 74.7 |
MsG0580030113.01.T01 | MTR_3g013740 | 25.796 | 314 | 187 | 14 | 19 | 311 | 9 | 297 | 2.44e-14 | 73.9 |
MsG0580030113.01.T01 | MTR_4g094365 | 26.408 | 284 | 172 | 8 | 49 | 323 | 1 | 256 | 2.59e-14 | 73.6 |
MsG0580030113.01.T01 | MTR_7g019250 | 29.381 | 194 | 107 | 5 | 171 | 350 | 179 | 356 | 3.16e-14 | 73.9 |
MsG0580030113.01.T01 | MTR_2g024110 | 24.812 | 266 | 159 | 11 | 54 | 310 | 2 | 235 | 3.97e-14 | 73.2 |
MsG0580030113.01.T01 | MTR_2g028140 | 24.841 | 314 | 194 | 13 | 54 | 342 | 3 | 299 | 4.77e-14 | 73.2 |
MsG0580030113.01.T01 | MTR_0115s0020 | 28.125 | 288 | 163 | 11 | 47 | 310 | 1 | 268 | 5.01e-14 | 73.2 |
MsG0580030113.01.T01 | MTR_4g030830 | 24.926 | 337 | 164 | 14 | 50 | 342 | 3 | 294 | 5.11e-14 | 72.8 |
MsG0580030113.01.T01 | MTR_8g035690 | 30.928 | 194 | 90 | 9 | 192 | 350 | 38 | 222 | 5.87e-14 | 72.0 |
MsG0580030113.01.T01 | MTR_8g101580 | 26.207 | 290 | 163 | 12 | 46 | 319 | 35 | 289 | 8.79e-14 | 72.4 |
MsG0580030113.01.T01 | MTR_3g009310 | 25.773 | 291 | 183 | 11 | 56 | 339 | 42 | 306 | 1.42e-13 | 71.6 |
MsG0580030113.01.T01 | MTR_5g070080 | 23.948 | 309 | 205 | 9 | 55 | 350 | 9 | 300 | 1.43e-13 | 71.6 |
MsG0580030113.01.T01 | MTR_8g467140 | 27.027 | 259 | 137 | 12 | 56 | 298 | 32 | 254 | 1.73e-13 | 70.9 |
MsG0580030113.01.T01 | MTR_8g073550 | 29.108 | 213 | 119 | 8 | 56 | 262 | 30 | 216 | 5.69e-13 | 68.2 |
MsG0580030113.01.T01 | MTR_5g096050 | 47.674 | 86 | 34 | 2 | 276 | 350 | 1 | 86 | 5.92e-13 | 65.5 |
MsG0580030113.01.T01 | MTR_1g097490 | 27.490 | 251 | 154 | 9 | 55 | 303 | 48 | 272 | 9.58e-13 | 68.9 |
MsG0580030113.01.T01 | MTR_7g101200 | 29.444 | 180 | 103 | 5 | 178 | 350 | 35 | 197 | 1.02e-12 | 67.4 |
MsG0580030113.01.T01 | MTR_0044s0300 | 24.046 | 262 | 166 | 9 | 56 | 310 | 38 | 273 | 1.18e-12 | 68.9 |
MsG0580030113.01.T01 | MTR_1g009110 | 24.756 | 307 | 193 | 11 | 58 | 349 | 16 | 299 | 1.29e-12 | 68.6 |
MsG0580030113.01.T01 | MTR_1g068835 | 22.148 | 298 | 189 | 12 | 54 | 340 | 2 | 267 | 1.40e-12 | 68.6 |
MsG0580030113.01.T01 | MTR_4g070550 | 23.750 | 320 | 186 | 15 | 53 | 342 | 2 | 293 | 1.51e-12 | 68.6 |
MsG0580030113.01.T01 | MTR_1g068860 | 24.161 | 298 | 181 | 12 | 56 | 340 | 4 | 269 | 1.57e-12 | 68.2 |
MsG0580030113.01.T01 | MTR_4g094400 | 38.614 | 101 | 45 | 3 | 264 | 350 | 1 | 98 | 1.76e-12 | 64.3 |
MsG0580030113.01.T01 | MTR_3g047540 | 43.590 | 78 | 34 | 4 | 246 | 318 | 5 | 77 | 2.40e-12 | 62.8 |
MsG0580030113.01.T01 | MTR_4g023070 | 25.188 | 266 | 165 | 12 | 56 | 314 | 3 | 241 | 3.45e-12 | 67.4 |
MsG0580030113.01.T01 | MTR_2g046900 | 26.950 | 282 | 159 | 13 | 53 | 315 | 25 | 278 | 3.85e-12 | 67.4 |
MsG0580030113.01.T01 | MTR_7g062060 | 25.150 | 334 | 180 | 13 | 50 | 342 | 6 | 310 | 3.86e-12 | 67.4 |
MsG0580030113.01.T01 | MTR_4g117780 | 28.405 | 257 | 137 | 12 | 56 | 300 | 11 | 232 | 4.72e-12 | 67.0 |
MsG0580030113.01.T01 | MTR_1g068875 | 23.333 | 300 | 182 | 12 | 54 | 340 | 2 | 266 | 5.03e-12 | 67.0 |
MsG0580030113.01.T01 | MTR_1g054575 | 26.786 | 280 | 144 | 14 | 56 | 317 | 52 | 288 | 5.24e-12 | 67.4 |
MsG0580030113.01.T01 | MTR_3g034130 | 25.694 | 288 | 170 | 13 | 51 | 319 | 4 | 266 | 6.65e-12 | 66.2 |
MsG0580030113.01.T01 | MTR_6g065980 | 25.597 | 293 | 169 | 12 | 41 | 324 | 1 | 253 | 8.89e-12 | 65.9 |
MsG0580030113.01.T01 | MTR_4g023130 | 30.405 | 148 | 81 | 5 | 181 | 323 | 76 | 206 | 1.12e-11 | 65.5 |
MsG0580030113.01.T01 | MTR_4g023120 | 25.188 | 266 | 165 | 11 | 56 | 314 | 3 | 241 | 1.18e-11 | 65.5 |
MsG0580030113.01.T01 | MTR_2g021050 | 22.186 | 311 | 176 | 12 | 53 | 344 | 2 | 265 | 1.60e-11 | 65.5 |
MsG0580030113.01.T01 | MTR_5g022420 | 27.206 | 272 | 162 | 13 | 42 | 310 | 13 | 251 | 1.64e-11 | 65.1 |
MsG0580030113.01.T01 | MTR_3g009260 | 25.085 | 295 | 187 | 10 | 25 | 314 | 10 | 275 | 1.75e-11 | 65.1 |
MsG0580030113.01.T01 | MTR_2g046830 | 25.448 | 279 | 164 | 11 | 53 | 319 | 22 | 268 | 2.46e-11 | 64.7 |
MsG0580030113.01.T01 | MTR_5g027330 | 26.415 | 265 | 160 | 10 | 64 | 310 | 48 | 295 | 3.06e-11 | 64.7 |
MsG0580030113.01.T01 | MTR_6g087660 | 46.970 | 66 | 33 | 1 | 52 | 115 | 14 | 79 | 3.31e-11 | 62.4 |
MsG0580030113.01.T01 | MTR_5g027370 | 26.415 | 265 | 160 | 10 | 64 | 310 | 37 | 284 | 3.81e-11 | 64.3 |
MsG0580030113.01.T01 | MTR_3g014540 | 25.769 | 260 | 152 | 12 | 56 | 302 | 29 | 260 | 4.23e-11 | 63.9 |
MsG0580030113.01.T01 | MTR_5g057710 | 25.182 | 274 | 161 | 11 | 56 | 316 | 46 | 288 | 5.08e-11 | 63.9 |
MsG0580030113.01.T01 | MTR_3g013770 | 24.506 | 253 | 169 | 7 | 56 | 302 | 33 | 269 | 5.38e-11 | 63.9 |
MsG0580030113.01.T01 | MTR_2g031720 | 23.826 | 298 | 192 | 11 | 56 | 344 | 6 | 277 | 6.41e-11 | 63.5 |
MsG0580030113.01.T01 | MTR_0242s0060 | 26.991 | 226 | 131 | 8 | 56 | 269 | 9 | 212 | 6.58e-11 | 63.5 |
MsG0580030113.01.T01 | MTR_0242s0040 | 26.991 | 226 | 131 | 8 | 56 | 269 | 9 | 212 | 6.58e-11 | 63.5 |
MsG0580030113.01.T01 | MTR_4g023440 | 26.172 | 256 | 144 | 12 | 41 | 284 | 1 | 223 | 8.12e-11 | 62.8 |
MsG0580030113.01.T01 | MTR_8g041490 | 37.374 | 99 | 30 | 3 | 55 | 153 | 14 | 80 | 8.17e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580030113.01.T01 | AT3G21120 | 26.087 | 276 | 159 | 11 | 55 | 315 | 2 | 247 | 1.23e-12 | 68.6 |
MsG0580030113.01.T01 | AT3G16210 | 26.733 | 202 | 110 | 6 | 56 | 257 | 5 | 168 | 5.40e-11 | 63.5 |
Find 66 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCTCTCCATTTGCAATT+TGG | 0.164840 | 5:+106826145 | None:intergenic |
AGACATTTGGTGCTATTAAA+TGG | 0.196001 | 5:-106825309 | MsG0580030113.01.T01:CDS |
GTCAACTTAGATTATGATTC+TGG | 0.216601 | 5:-106825825 | MsG0580030113.01.T01:CDS |
TCCATTTGCAATTTGGAATC+TGG | 0.242813 | 5:+106826152 | None:intergenic |
AGAAAAGATCATTAGGTATA+TGG | 0.247434 | 5:+106826117 | None:intergenic |
CGATACATAGTCATGAAATA+TGG | 0.247891 | 5:+106826011 | None:intergenic |
TCGCAATAATCTCTTAAATA+AGG | 0.283199 | 5:-106825991 | MsG0580030113.01.T01:CDS |
CACATTTGTTGTCATTTGAT+TGG | 0.291344 | 5:-106825404 | MsG0580030113.01.T01:CDS |
ACTATATATCTCCCATATAT+AGG | 0.302339 | 5:+106825548 | None:intergenic |
ATCAAATCTTTGAAGAGGTT+TGG | 0.304451 | 5:-106826071 | MsG0580030113.01.T01:CDS |
CTAATTACAGACCCTATATA+TGG | 0.309762 | 5:-106825560 | MsG0580030113.01.T01:CDS |
TCTGTTTATCATCATGCATT+TGG | 0.316462 | 5:-106825654 | MsG0580030113.01.T01:CDS |
GAAAGAAAAGAGAAGCAATT+AGG | 0.326258 | 5:-106827381 | MsG0580030113.01.T01:CDS |
GAAGCAATTAGGAATGTTAA+TGG | 0.330546 | 5:-106827370 | MsG0580030113.01.T01:CDS |
TTAGGTTCTGGTAGCGTTCA+TGG | 0.344140 | 5:-106825792 | MsG0580030113.01.T01:CDS |
ACAGACACATCATGATAATA+AGG | 0.345842 | 5:+106825963 | None:intergenic |
TACATCAAACATTTAGTCCT+TGG | 0.357392 | 5:-106825935 | MsG0580030113.01.T01:CDS |
ATTGTGGAATCTATCTACTA+TGG | 0.363910 | 5:-106825730 | MsG0580030113.01.T01:CDS |
AGAGAGAAGAAAAGATCATT+AGG | 0.365847 | 5:+106826110 | None:intergenic |
TAAACAGAAACATAACAATT+AGG | 0.382112 | 5:+106825669 | None:intergenic |
AGAATAGGATCAAATTAGAT+TGG | 0.393458 | 5:-106825854 | MsG0580030113.01.T01:CDS |
TGATAGATTTGATTGTTATT+CGG | 0.394243 | 5:-106825337 | MsG0580030113.01.T01:CDS |
AAACACAATGAATAATTTGA+TGG | 0.397571 | 5:-106827422 | None:intergenic |
ATCATCCATGTCTGAAGGTA+TGG | 0.398145 | 5:+106825356 | None:intergenic |
TTTGATTTGTATAATCTTGT+TGG | 0.411421 | 5:-106825888 | MsG0580030113.01.T01:CDS |
GAAGACCAATTGTACATAGA+TGG | 0.413300 | 5:-106825468 | MsG0580030113.01.T01:CDS |
GACATTTGGTGCTATTAAAT+GGG | 0.421447 | 5:-106825308 | MsG0580030113.01.T01:CDS |
TTGGTGAGAGGTTTGAGAAT+AGG | 0.423741 | 5:-106825869 | MsG0580030113.01.T01:CDS |
CTATATATCTCCCATATATA+GGG | 0.431967 | 5:+106825549 | None:intergenic |
TCCAGATTCCAAATTGCAAA+TGG | 0.433198 | 5:-106826153 | MsG0580030113.01.T01:CDS |
GAAAAGATCATTAGGTATAT+GGG | 0.439118 | 5:+106826118 | None:intergenic |
AACCTCTTCAAAGATTTGAT+AGG | 0.439619 | 5:+106826074 | None:intergenic |
AGAGTCCATCTATGTACAAT+TGG | 0.454016 | 5:+106825463 | None:intergenic |
ATAGTCTAAGAAACAACTCT+TGG | 0.464442 | 5:-106825530 | MsG0580030113.01.T01:CDS |
ACATCAAACATTTAGTCCTT+GGG | 0.466376 | 5:-106825934 | MsG0580030113.01.T01:CDS |
AGGTTCAGAATCAAAAGGGC+TGG | 0.473613 | 5:+106825689 | None:intergenic |
TTATTCGGTGTGGAGACATT+TGG | 0.485501 | 5:-106825322 | MsG0580030113.01.T01:CDS |
CAATTAGGTTCAGAATCAAA+AGG | 0.489661 | 5:+106825684 | None:intergenic |
GATACATAGTCATGAAATAT+GGG | 0.506999 | 5:+106826012 | None:intergenic |
TACCTATCAAATCTTTGAAG+AGG | 0.511981 | 5:-106826076 | MsG0580030113.01.T01:CDS |
ATCTTAAATTACAAAGAGAC+GGG | 0.512765 | 5:-106825273 | MsG0580030113.01.T01:CDS |
CATCTTAAATTACAAAGAGA+CGG | 0.514950 | 5:-106825274 | MsG0580030113.01.T01:CDS |
AATTAGGTTCAGAATCAAAA+GGG | 0.528488 | 5:+106825685 | None:intergenic |
TTGGATGTGTACACAAATCA+TGG | 0.533940 | 5:-106826052 | MsG0580030113.01.T01:CDS |
CACACCCATACCTTCAGACA+TGG | 0.539333 | 5:-106825361 | MsG0580030113.01.T01:CDS |
GGTTCAGAATCAAAAGGGCT+GGG | 0.540475 | 5:+106825690 | None:intergenic |
TAATTACAGACCCTATATAT+GGG | 0.541367 | 5:-106825559 | MsG0580030113.01.T01:CDS |
GATCATTAGGTATATGGGAC+TGG | 0.542945 | 5:+106826123 | None:intergenic |
TGTATAATCTTGTTGGTGAG+AGG | 0.546817 | 5:-106825881 | MsG0580030113.01.T01:CDS |
GATTTGATTGTTATTCGGTG+TGG | 0.547846 | 5:-106825332 | MsG0580030113.01.T01:CDS |
AAAGAACAGTTGTGCTACTA+CGG | 0.549462 | 5:-106827347 | MsG0580030113.01.T01:CDS |
TCATCCATGTCTGAAGGTAT+GGG | 0.567634 | 5:+106825357 | None:intergenic |
GACTATAAAGTGATGCGCCA+AGG | 0.587368 | 5:-106825612 | MsG0580030113.01.T01:CDS |
CAAACATTTAGTCCTTGGGA+TGG | 0.597114 | 5:-106825930 | MsG0580030113.01.T01:CDS |
CATGTCTGAAGGTATGGGTG+TGG | 0.600871 | 5:+106825362 | None:intergenic |
ACAGTTGTGCTACTACGGAA+TGG | 0.604778 | 5:-106827342 | MsG0580030113.01.T01:CDS |
AATCTATCATCCATGTCTGA+AGG | 0.609052 | 5:+106825351 | None:intergenic |
TCATAATCTAAGTTGACACT+TGG | 0.615360 | 5:+106825831 | None:intergenic |
TACAATTGGTCTTCACTCGT+AGG | 0.619039 | 5:+106825477 | None:intergenic |
ACATAGATGGACTCTCACAC+TGG | 0.628070 | 5:-106825455 | MsG0580030113.01.T01:CDS |
CTGAAGGTATGGGTGTGGAA+AGG | 0.628505 | 5:+106825367 | None:intergenic |
ACACATCATGATAATAAGGA+TGG | 0.633075 | 5:+106825967 | None:intergenic |
TCGTGATAATAACCATCCCA+AGG | 0.652420 | 5:+106825918 | None:intergenic |
GTCATTTGATTGGAGCAATG+AGG | 0.662062 | 5:-106825394 | MsG0580030113.01.T01:CDS |
TCCACAATAAAATATTCACT+CGG | 0.675827 | 5:+106825745 | None:intergenic |
TCAGAATCAAAAGGGCTGGG+AGG | 0.695529 | 5:+106825693 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTAATTAATATTTGATGA+AGG | + | Chr5:106826381-106826400 | None:intergenic | 15.0% |
!! | ATAGATTGAAATAATAGTTA+AGG | + | Chr5:106826049-106826068 | None:intergenic | 15.0% |
!!! | ATTTTTGGCATTTAAAAAAA+AGG | - | Chr5:106825540-106825559 | MsG0580030113.01.T01:CDS | 15.0% |
!! | ATATCTATACCTATTCATAA+AGG | + | Chr5:106825587-106825606 | None:intergenic | 20.0% |
!! | ATTGAGAAGATATTATCATT+TGG | + | Chr5:106826301-106826320 | None:intergenic | 20.0% |
!! | TAAACAGAAACATAACAATT+AGG | + | Chr5:106826997-106827016 | None:intergenic | 20.0% |
!! | TTAAAATACCTTCTCAATTA+AGG | - | Chr5:106825662-106825681 | MsG0580030113.01.T01:CDS | 20.0% |
!! | TTCAGTACAACATTAATTAT+TGG | + | Chr5:106826116-106826135 | None:intergenic | 20.0% |
!!! | ACAAAATCTATTTGATTTCT+TGG | + | Chr5:106825988-106826007 | None:intergenic | 20.0% |
!!! | ATAAAGGCAATACTTTTTTT+TGG | + | Chr5:106825571-106825590 | None:intergenic | 20.0% |
!!! | GATTCTGGTTTTAATATTTT+AGG | - | Chr5:106826853-106826872 | MsG0580030113.01.T01:intron | 20.0% |
!!! | TGATAGATTTGATTGTTATT+CGG | - | Chr5:106827326-106827345 | MsG0580030113.01.T01:CDS | 20.0% |
!!! | TTTGATTTGTATAATCTTGT+TGG | - | Chr5:106826775-106826794 | MsG0580030113.01.T01:intron | 20.0% |
! | AAGGAAAAAATCATTTACGT+GGG | - | Chr5:106825424-106825443 | MsG0580030113.01.T01:CDS | 25.0% |
! | AATTAGGTTCAGAATCAAAA+GGG | + | Chr5:106826981-106827000 | None:intergenic | 25.0% |
! | ACTATATATCTCCCATATAT+AGG | + | Chr5:106827118-106827137 | None:intergenic | 25.0% |
! | AGAAAAGATCATTAGGTATA+TGG | + | Chr5:106826549-106826568 | None:intergenic | 25.0% |
! | AGAATAGGATCAAATTAGAT+TGG | - | Chr5:106826809-106826828 | MsG0580030113.01.T01:intron | 25.0% |
! | ATCTTAAATTACAAAGAGAC+GGG | - | Chr5:106827390-106827409 | MsG0580030113.01.T01:CDS | 25.0% |
! | CAAAAAAACCTTAATTGAGA+AGG | + | Chr5:106825673-106825692 | None:intergenic | 25.0% |
! | CATAGCTAACAAAAAGAAAA+AGG | + | Chr5:106825889-106825908 | None:intergenic | 25.0% |
! | CATCTTAAATTACAAAGAGA+CGG | - | Chr5:106827389-106827408 | MsG0580030113.01.T01:CDS | 25.0% |
! | CTATATATCTCCCATATATA+GGG | + | Chr5:106827117-106827136 | None:intergenic | 25.0% |
! | GAAAAGATCATTAGGTATAT+GGG | + | Chr5:106826548-106826567 | None:intergenic | 25.0% |
! | GATACATAGTCATGAAATAT+GGG | + | Chr5:106826654-106826673 | None:intergenic | 25.0% |
! | GGGAAAAAAATAACTGAAAA+GGG | - | Chr5:106825516-106825535 | MsG0580030113.01.T01:CDS | 25.0% |
! | TAATTACAGACCCTATATAT+GGG | - | Chr5:106827104-106827123 | MsG0580030113.01.T01:intron | 25.0% |
! | TCCACAATAAAATATTCACT+CGG | + | Chr5:106826921-106826940 | None:intergenic | 25.0% |
! | TCGCAATAATCTCTTAAATA+AGG | - | Chr5:106826672-106826691 | MsG0580030113.01.T01:intron | 25.0% |
! | TGGGAAAAAAATAACTGAAA+AGG | - | Chr5:106825515-106825534 | MsG0580030113.01.T01:CDS | 25.0% |
! | TTTCTCTCTCTACATTAAAT+AGG | - | Chr5:106826071-106826090 | MsG0580030113.01.T01:CDS | 25.0% |
!! | AAACGATAAGTATTGTGAAA+TGG | - | Chr5:106826185-106826204 | MsG0580030113.01.T01:intron | 25.0% |
!! | ACAGTTGTTGATGAAAAAAA+TGG | - | Chr5:106825349-106825368 | MsG0580030113.01.T01:CDS | 25.0% |
!! | TTCACAATACTTATCGTTTT+TGG | + | Chr5:106826184-106826203 | None:intergenic | 25.0% |
!!! | AAAGTATTGCCTTTATGAAT+AGG | - | Chr5:106825575-106825594 | MsG0580030113.01.T01:CDS | 25.0% |
!!! | AACGCAAAAGTATTGTTAAT+TGG | + | Chr5:106826453-106826472 | None:intergenic | 25.0% |
!!! | ACGCAAAAGTATTGTTAATT+GGG | + | Chr5:106826452-106826471 | None:intergenic | 25.0% |
!!! | GGTTTTAATATTTTAGGTTC+TGG | - | Chr5:106826859-106826878 | MsG0580030113.01.T01:intron | 25.0% |
!!! | TAAGCGGTAGATATTTTTTT+TGG | + | Chr5:106825915-106825934 | None:intergenic | 25.0% |
!!! | TGAGAAGTTTTTTTAAGTGT+GGG | - | Chr5:106825496-106825515 | MsG0580030113.01.T01:CDS | 25.0% |
!!! | TTTGAGTTGTTATTGAGATT+TGG | + | Chr5:106826420-106826439 | None:intergenic | 25.0% |
AACCTCTTCAAAGATTTGAT+AGG | + | Chr5:106826592-106826611 | None:intergenic | 30.0% | |
ACACATCATGATAATAAGGA+TGG | + | Chr5:106826699-106826718 | None:intergenic | 30.0% | |
ACAGACACATCATGATAATA+AGG | + | Chr5:106826703-106826722 | None:intergenic | 30.0% | |
ACATCAAACATTTAGTCCTT+GGG | - | Chr5:106826729-106826748 | MsG0580030113.01.T01:intron | 30.0% | |
AGAAGTTAATGGAAAGTAAC+CGG | - | Chr5:106825450-106825469 | MsG0580030113.01.T01:CDS | 30.0% | |
AGAGAGAAGAAAAGATCATT+AGG | + | Chr5:106826556-106826575 | None:intergenic | 30.0% | |
AGTGTATGTAGAAAATGTGT+GGG | - | Chr5:106825383-106825402 | MsG0580030113.01.T01:CDS | 30.0% | |
ATAGTCTAAGAAACAACTCT+TGG | - | Chr5:106827133-106827152 | MsG0580030113.01.T01:intron | 30.0% | |
ATCAAAGGAAGAAGATCATA+AGG | + | Chr5:106825795-106825814 | None:intergenic | 30.0% | |
ATTGTGGAATCTATCTACTA+TGG | - | Chr5:106826933-106826952 | MsG0580030113.01.T01:intron | 30.0% | |
CAATTAGGTTCAGAATCAAA+AGG | + | Chr5:106826982-106827001 | None:intergenic | 30.0% | |
CGATACATAGTCATGAAATA+TGG | + | Chr5:106826655-106826674 | None:intergenic | 30.0% | |
CTAATTACAGACCCTATATA+TGG | - | Chr5:106827103-106827122 | MsG0580030113.01.T01:intron | 30.0% | |
GAAAGAAAAGAGAAGCAATT+AGG | - | Chr5:106825282-106825301 | MsG0580030113.01.T01:CDS | 30.0% | |
GAAGCAATTAGGAATGTTAA+TGG | - | Chr5:106825293-106825312 | MsG0580030113.01.T01:CDS | 30.0% | |
GAAGGAAAAAATCATTTACG+TGG | - | Chr5:106825423-106825442 | MsG0580030113.01.T01:CDS | 30.0% | |
GTCAACTTAGATTATGATTC+TGG | - | Chr5:106826838-106826857 | MsG0580030113.01.T01:intron | 30.0% | |
TACATCAAACATTTAGTCCT+TGG | - | Chr5:106826728-106826747 | MsG0580030113.01.T01:intron | 30.0% | |
TAGACTTAATTGAGAAGCAA+CGG | + | Chr5:106826334-106826353 | None:intergenic | 30.0% | |
TAGTGTATGTAGAAAATGTG+TGG | - | Chr5:106825382-106825401 | MsG0580030113.01.T01:CDS | 30.0% | |
TCTGTTTATCATCATGCATT+TGG | - | Chr5:106827009-106827028 | MsG0580030113.01.T01:intron | 30.0% | |
TGAGAATACCTTCTCAATTA+AGG | - | Chr5:106826244-106826263 | MsG0580030113.01.T01:intron | 30.0% | |
! | ACCGAGTGAATATTTTATTG+TGG | - | Chr5:106826917-106826936 | MsG0580030113.01.T01:intron | 30.0% |
! | ATCAAATCTTTGAAGAGGTT+TGG | - | Chr5:106826592-106826611 | MsG0580030113.01.T01:intron | 30.0% |
! | CTCTTTTCTTTCTTATCTCA+CGG | + | Chr5:106825274-106825293 | None:intergenic | 30.0% |
! | TACCTATCAAATCTTTGAAG+AGG | - | Chr5:106826587-106826606 | MsG0580030113.01.T01:intron | 30.0% |
! | TCATAATCTAAGTTGACACT+TGG | + | Chr5:106826835-106826854 | None:intergenic | 30.0% |
!! | AGACATTTGGTGCTATTAAA+TGG | - | Chr5:106827354-106827373 | MsG0580030113.01.T01:CDS | 30.0% |
!! | CACATTTGTTGTCATTTGAT+TGG | - | Chr5:106827259-106827278 | MsG0580030113.01.T01:intron | 30.0% |
!! | GACATTTGGTGCTATTAAAT+GGG | - | Chr5:106827355-106827374 | MsG0580030113.01.T01:CDS | 30.0% |
!!! | ATAACTGAAAAGGGCATTTT+TGG | - | Chr5:106825525-106825544 | MsG0580030113.01.T01:CDS | 30.0% |
!!! | GTGAGAAGTTTTTTTAAGTG+TGG | - | Chr5:106825495-106825514 | MsG0580030113.01.T01:CDS | 30.0% |
AAAGGAAGAAGATCATAAGG+AGG | + | Chr5:106825792-106825811 | None:intergenic | 35.0% | |
AATCTATCATCCATGTCTGA+AGG | + | Chr5:106827315-106827334 | None:intergenic | 35.0% | |
AGACTTAATTGAGAAGCAAC+GGG | + | Chr5:106826333-106826352 | None:intergenic | 35.0% | |
AGAGTCCATCTATGTACAAT+TGG | + | Chr5:106827203-106827222 | None:intergenic | 35.0% | |
ATGATCTTCTTCCTTTGATC+AGG | - | Chr5:106825796-106825815 | MsG0580030113.01.T01:CDS | 35.0% | |
CTCTTCATTCGAAGTATAAG+CGG | + | Chr5:106825751-106825770 | None:intergenic | 35.0% | |
CTTCTCAATTAAGTCTACTC+AGG | - | Chr5:106826337-106826356 | MsG0580030113.01.T01:intron | 35.0% | |
GAAGACCAATTGTACATAGA+TGG | - | Chr5:106827195-106827214 | MsG0580030113.01.T01:intron | 35.0% | |
TCCAGATTCCAAATTGCAAA+TGG | - | Chr5:106826510-106826529 | MsG0580030113.01.T01:intron | 35.0% | |
TTGGATGTGTACACAAATCA+TGG | - | Chr5:106826611-106826630 | MsG0580030113.01.T01:intron | 35.0% | |
! | AAAGAACAGTTGTGCTACTA+CGG | - | Chr5:106825316-106825335 | MsG0580030113.01.T01:CDS | 35.0% |
! | GATTTGATTGTTATTCGGTG+TGG | - | Chr5:106827331-106827350 | MsG0580030113.01.T01:CDS | 35.0% |
! | TCCATTTGCAATTTGGAATC+TGG | + | Chr5:106826514-106826533 | None:intergenic | 35.0% |
! | TGGAATCTGGAATCTGAAAA+CGG | + | Chr5:106826501-106826520 | None:intergenic | 35.0% |
! | TGTATAATCTTGTTGGTGAG+AGG | - | Chr5:106826782-106826801 | MsG0580030113.01.T01:intron | 35.0% |
! | TTTTGTCAACAACTGTTCCT+TGG | + | Chr5:106827071-106827090 | None:intergenic | 35.0% |
!! | CATTAAACTGTGATAGTGGT+TGG | - | Chr5:106825473-106825492 | MsG0580030113.01.T01:CDS | 35.0% |
ATCATCCATGTCTGAAGGTA+TGG | + | Chr5:106827310-106827329 | None:intergenic | 40.0% | |
CAAACATTTAGTCCTTGGGA+TGG | - | Chr5:106826733-106826752 | MsG0580030113.01.T01:intron | 40.0% | |
CCACTATCACAGTTTAATGC+CGG | + | Chr5:106825472-106825491 | None:intergenic | 40.0% | |
GAAAAGAAAGTCTAAGCCCT+AGG | + | Chr5:106825846-106825865 | None:intergenic | 40.0% | |
GATCATTAGGTATATGGGAC+TGG | + | Chr5:106826543-106826562 | None:intergenic | 40.0% | |
GCTTCTCTCCATTTGCAATT+TGG | + | Chr5:106826521-106826540 | None:intergenic | 40.0% | |
GTCATTTGATTGGAGCAATG+AGG | - | Chr5:106827269-106827288 | MsG0580030113.01.T01:intron | 40.0% | |
TACGTGGGATGAGAAGTTAA+TGG | - | Chr5:106825439-106825458 | MsG0580030113.01.T01:CDS | 40.0% | |
TCGTGATAATAACCATCCCA+AGG | + | Chr5:106826748-106826767 | None:intergenic | 40.0% | |
TTCGAAGTATAAGCGGTAGA+TGG | + | Chr5:106825744-106825763 | None:intergenic | 40.0% | |
TTGGTGAGAGGTTTGAGAAT+AGG | - | Chr5:106826794-106826813 | MsG0580030113.01.T01:intron | 40.0% | |
! | AACGACAAGTACTGTGTGAA+CGG | + | Chr5:106825946-106825965 | None:intergenic | 40.0% |
! | TCATCCATGTCTGAAGGTAT+GGG | + | Chr5:106827309-106827328 | None:intergenic | 40.0% |
!! | TACAATTGGTCTTCACTCGT+AGG | + | Chr5:106827189-106827208 | None:intergenic | 40.0% |
!! | TTATTCGGTGTGGAGACATT+TGG | - | Chr5:106827341-106827360 | MsG0580030113.01.T01:CDS | 40.0% |
AGGTTCAGAATCAAAAGGGC+TGG | + | Chr5:106826977-106826996 | None:intergenic | 45.0% | |
CATGGGAACTGAGTTTCCTA+GGG | - | Chr5:106825827-106825846 | MsG0580030113.01.T01:CDS | 45.0% | |
CCGGCATTAAACTGTGATAG+TGG | - | Chr5:106825469-106825488 | MsG0580030113.01.T01:CDS | 45.0% | |
GACTATAAAGTGATGCGCCA+AGG | - | Chr5:106827051-106827070 | MsG0580030113.01.T01:intron | 45.0% | |
GGTTCAGAATCAAAAGGGCT+GGG | + | Chr5:106826976-106826995 | None:intergenic | 45.0% | |
! | ACAGTTGTGCTACTACGGAA+TGG | - | Chr5:106825321-106825340 | MsG0580030113.01.T01:CDS | 45.0% |
! | ACATAGATGGACTCTCACAC+TGG | - | Chr5:106827208-106827227 | MsG0580030113.01.T01:intron | 45.0% |
! | GCGGTAGATGGATTTGATGA+AGG | + | Chr5:106825732-106825751 | None:intergenic | 45.0% |
! | GTGAACGGAGGAAGTATAAG+CGG | + | Chr5:106825931-106825950 | None:intergenic | 45.0% |
! | TTAGGTTCTGGTAGCGTTCA+TGG | - | Chr5:106826871-106826890 | MsG0580030113.01.T01:intron | 45.0% |
CACACCCATACCTTCAGACA+TGG | - | Chr5:106827302-106827321 | MsG0580030113.01.T01:intron | 50.0% | |
CCATGGGAACTGAGTTTCCT+AGG | - | Chr5:106825826-106825845 | MsG0580030113.01.T01:CDS | 50.0% | |
CCTAGGAAACTCAGTTCCCA+TGG | + | Chr5:106825829-106825848 | None:intergenic | 50.0% | |
TCAGAATCAAAAGGGCTGGG+AGG | + | Chr5:106826973-106826992 | None:intergenic | 50.0% | |
! | CATGTCTGAAGGTATGGGTG+TGG | + | Chr5:106827304-106827323 | None:intergenic | 50.0% |
! | CTGAAGGTATGGGTGTGGAA+AGG | + | Chr5:106827299-106827318 | None:intergenic | 50.0% |
! | GACAAGTACTGTGTGAACGG+AGG | + | Chr5:106825943-106825962 | None:intergenic | 50.0% |
! | TCCTTCCCACAGACTGACTT+CGG | + | Chr5:106825409-106825428 | None:intergenic | 50.0% |
TTGATCAGGCTCGACGCCAT+GGG | - | Chr5:106825810-106825829 | MsG0580030113.01.T01:CDS | 55.0% | |
TTTGATCAGGCTCGACGCCA+TGG | - | Chr5:106825809-106825828 | MsG0580030113.01.T01:CDS | 55.0% | |
! | ATGGCGTCGAGCCTGATCAA+AGG | + | Chr5:106825810-106825829 | None:intergenic | 55.0% |
GCCGAAGTCAGTCTGTGGGA+AGG | - | Chr5:106825405-106825424 | MsG0580030113.01.T01:CDS | 60.0% | |
GTGGGCCGAAGTCAGTCTGT+GGG | - | Chr5:106825401-106825420 | MsG0580030113.01.T01:CDS | 60.0% | |
TGTGGGCCGAAGTCAGTCTG+TGG | - | Chr5:106825400-106825419 | MsG0580030113.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 106825248 | 106827437 | 106825248 | ID=MsG0580030113.01;Name=MsG0580030113.01 |
Chr5 | mRNA | 106825248 | 106827437 | 106825248 | ID=MsG0580030113.01.T01;Parent=MsG0580030113.01;Name=MsG0580030113.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0|0|1|1|1|2|0|350 |
Chr5 | exon | 106827315 | 106827437 | 106827315 | ID=MsG0580030113.01.T01:exon:14727;Parent=MsG0580030113.01.T01 |
Chr5 | exon | 106825248 | 106826177 | 106825248 | ID=MsG0580030113.01.T01:exon:14726;Parent=MsG0580030113.01.T01 |
Chr5 | CDS | 106827315 | 106827437 | 106827315 | ID=MsG0580030113.01.T01:cds;Parent=MsG0580030113.01.T01 |
Chr5 | CDS | 106825248 | 106826177 | 106825248 | ID=MsG0580030113.01.T01:cds;Parent=MsG0580030113.01.T01 |
Gene Sequence |
Protein sequence |