AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042110.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042110.01.T01 MTR_8g012090 85.511 352 22 1 1 352 1 323 0.0 599
MsG0880042110.01.T01 MTR_5g097330 70.166 362 87 8 5 351 5 360 5.16e-173 487
MsG0880042110.01.T01 MTR_7g111700 63.408 358 73 7 1 343 1 315 1.33e-143 411
MsG0880042110.01.T01 MTR_5g097350 53.994 363 125 10 1 345 1 339 2.31e-108 322
MsG0880042110.01.T01 MTR_8g063440 50.997 351 145 8 5 345 1 334 2.11e-105 314
MsG0880042110.01.T01 MTR_7g017130 50.000 368 146 10 2 349 4 353 3.54e-104 312
MsG0880042110.01.T01 MTR_7g017170 50.000 368 146 10 2 349 4 353 3.88e-104 312
MsG0880042110.01.T01 MTR_0129s0120 52.841 352 133 12 11 345 12 347 6.16e-104 311
MsG0880042110.01.T01 MTR_5g037680 50.000 366 131 11 11 352 3 340 8.46e-104 313
MsG0880042110.01.T01 MTR_0129s0070 50.689 363 144 11 1 345 2 347 2.95e-103 310
MsG0880042110.01.T01 MTR_0134s0060 48.257 373 151 8 5 345 1 363 7.47e-100 301
MsG0880042110.01.T01 MTR_2g022000 47.354 378 156 8 1 345 1 368 7.83e-100 302
MsG0880042110.01.T01 MTR_7g017040 50.847 354 140 8 11 345 11 349 4.34e-99 299
MsG0880042110.01.T01 MTR_6g086825 48.238 369 151 9 5 345 55 411 5.60e-99 301
MsG0880042110.01.T01 MTR_4g102410 48.895 362 155 11 3 344 48 399 1.49e-98 299
MsG0880042110.01.T01 MTR_4g055820 47.339 357 149 7 11 342 9 351 2.56e-98 295
MsG0880042110.01.T01 MTR_0054s0100 49.046 367 150 9 4 345 5 359 3.72e-98 297
MsG0880042110.01.T01 MTR_0054s0090 49.041 365 151 8 4 345 5 357 7.40e-98 296
MsG0880042110.01.T01 MTR_2g021800 46.966 379 157 8 1 345 1 369 1.18e-97 296
MsG0880042110.01.T01 MTR_5g096630 49.062 373 151 10 1 344 1 363 1.60e-96 293
MsG0880042110.01.T01 MTR_0129s0050 48.021 379 143 11 1 345 1 359 6.13e-96 291
MsG0880042110.01.T01 MTR_2g038680 47.632 380 145 11 1 345 1 361 9.53e-96 291
MsG0880042110.01.T01 MTR_5g059430 46.438 379 150 9 11 352 21 383 2.73e-95 290
MsG0880042110.01.T01 MTR_4g028510 46.995 366 155 10 4 345 3 353 1.08e-94 290
MsG0880042110.01.T01 MTR_5g097220 48.571 385 144 15 1 352 1 364 1.94e-94 287
MsG0880042110.01.T01 MTR_7g069550 45.983 361 152 11 11 345 9 352 6.15e-94 285
MsG0880042110.01.T01 MTR_6g080680 48.098 368 146 10 1 345 1 346 2.16e-93 284
MsG0880042110.01.T01 MTR_6g461660 48.034 356 165 7 4 347 7 354 3.92e-93 284
MsG0880042110.01.T01 MTR_8g039500 45.609 353 155 12 5 345 1 328 7.46e-93 281
MsG0880042110.01.T01 MTR_8g041270 45.161 372 158 8 11 352 10 365 1.88e-92 282
MsG0880042110.01.T01 MTR_5g069390 45.915 355 165 8 11 345 21 368 3.54e-92 284
MsG0880042110.01.T01 MTR_5g096910 48.767 365 145 13 1 345 1 343 1.23e-91 280
MsG0880042110.01.T01 MTR_8g013000 45.205 365 167 8 8 352 2 353 2.49e-91 279
MsG0880042110.01.T01 MTR_6g079770 46.561 378 156 10 2 345 3 368 3.31e-91 279
MsG0880042110.01.T01 MTR_4g130330 48.056 360 144 12 10 345 1 341 5.22e-91 278
MsG0880042110.01.T01 MTR_2g104340 46.448 366 153 10 11 352 9 355 6.51e-91 278
MsG0880042110.01.T01 MTR_6g079810 47.185 373 157 9 1 345 54 414 7.34e-90 277
MsG0880042110.01.T01 MTR_6g090180 46.361 371 161 12 1 345 31 389 1.37e-89 276
MsG0880042110.01.T01 MTR_1g007410 45.989 374 163 9 1 352 7 363 1.90e-89 274
MsG0880042110.01.T01 MTR_2g066170 44.101 356 165 11 5 345 1 337 1.26e-88 271
MsG0880042110.01.T01 MTR_4g028660 46.849 365 154 11 4 345 3 350 2.43e-88 271
MsG0880042110.01.T01 MTR_4g027450 46.849 365 154 11 4 345 3 350 2.43e-88 271
MsG0880042110.01.T01 MTR_1g007450 48.034 356 155 10 5 342 1 344 4.89e-88 271
MsG0880042110.01.T01 MTR_2g104280 46.032 378 152 15 8 352 6 364 8.58e-88 270
MsG0880042110.01.T01 MTR_7g016930 47.059 357 158 8 1 352 1 331 7.56e-87 265
MsG0880042110.01.T01 MTR_1g076810 59.756 246 79 6 6 243 8 241 2.25e-86 274
MsG0880042110.01.T01 MTR_2g065860 44.444 360 160 9 5 345 1 339 3.08e-86 266
MsG0880042110.01.T01 MTR_2g021950 45.856 362 167 10 1 345 1 350 3.91e-86 265
MsG0880042110.01.T01 MTR_4g028680 47.671 365 152 13 4 345 3 351 8.50e-86 265
MsG0880042110.01.T01 MTR_4g117550 45.179 363 142 11 1 345 1 324 1.85e-85 263
MsG0880042110.01.T01 MTR_2g066200 43.370 362 161 12 5 345 1 339 2.77e-85 263
MsG0880042110.01.T01 MTR_2g021770 43.094 362 169 7 11 345 7 358 2.91e-85 264
MsG0880042110.01.T01 MTR_3g011120 46.939 343 150 9 13 345 11 331 6.26e-85 261
MsG0880042110.01.T01 MTR_2g064950 42.120 368 169 8 8 352 2 348 2.47e-83 258
MsG0880042110.01.T01 MTR_5g097680 44.297 377 173 11 11 351 12 387 4.84e-83 259
MsG0880042110.01.T01 MTR_5g072060 45.892 353 138 11 14 345 4 324 2.31e-82 262
MsG0880042110.01.T01 MTR_8g464770 45.533 347 155 13 11 345 7 331 3.10e-81 252
MsG0880042110.01.T01 MTR_7g079640 43.767 361 152 11 1 345 1 326 3.63e-81 252
MsG0880042110.01.T01 MTR_1g007430 47.647 340 142 11 27 352 7 324 8.19e-81 249
MsG0880042110.01.T01 MTR_0831s0010 44.318 352 157 11 10 345 44 372 1.00e-80 253
MsG0880042110.01.T01 MTR_4g028750 46.045 354 153 11 13 345 13 349 2.41e-80 251
MsG0880042110.01.T01 MTR_2g066150 42.651 347 156 9 5 345 1 310 3.10e-80 249
MsG0880042110.01.T01 MTR_2g065840 42.458 358 169 9 5 345 1 338 5.27e-79 247
MsG0880042110.01.T01 MTR_8g064890 45.115 348 160 11 11 345 10 339 1.31e-78 246
MsG0880042110.01.T01 MTR_6g478230 42.933 375 148 11 5 345 16 358 2.90e-78 246
MsG0880042110.01.T01 MTR_1g053510 43.122 378 157 14 5 345 1 357 5.07e-78 245
MsG0880042110.01.T01 MTR_4g014370 43.280 372 165 11 7 345 2 360 9.12e-78 244
MsG0880042110.01.T01 MTR_2g034700 45.634 355 150 13 11 352 8 332 1.66e-77 243
MsG0880042110.01.T01 MTR_8g063330 41.436 362 173 9 5 345 1 344 2.38e-77 245
MsG0880042110.01.T01 MTR_6g090250 43.804 347 156 10 36 345 31 375 4.04e-75 238
MsG0880042110.01.T01 MTR_8g046310 43.417 357 153 12 6 344 3 328 1.09e-74 236
MsG0880042110.01.T01 MTR_5g024260 43.127 371 164 15 3 345 5 356 1.15e-74 236
MsG0880042110.01.T01 MTR_8g032980 40.674 386 172 11 5 346 1 373 2.76e-74 236
MsG0880042110.01.T01 MTR_5g091140 42.424 363 154 10 5 345 37 366 4.85e-74 235
MsG0880042110.01.T01 MTR_5g074800 44.231 312 138 10 55 345 1 297 1.75e-73 231
MsG0880042110.01.T01 MTR_8g033140 38.342 386 179 11 3 346 1 369 3.79e-71 228
MsG0880042110.01.T01 MTR_8g467670 41.860 344 161 11 15 345 13 330 2.67e-69 222
MsG0880042110.01.T01 MTR_5g097820 45.936 283 108 10 3 261 8 269 8.40e-69 217
MsG0880042110.01.T01 MTR_6g078010 43.312 314 129 9 53 345 1 286 3.74e-68 218
MsG0880042110.01.T01 MTR_8g033110 39.842 379 176 13 5 345 1 365 1.90e-67 218
MsG0880042110.01.T01 MTR_8g046220 41.425 379 157 14 6 344 3 356 1.97e-67 218
MsG0880042110.01.T01 MTR_5g074850 44.892 372 156 17 1 342 20 372 3.48e-67 228
MsG0880042110.01.T01 MTR_8g046200 39.295 397 163 14 1 344 1 372 1.19e-66 216
MsG0880042110.01.T01 MTR_8g036970 40.708 339 122 11 20 345 2 274 1.47e-66 214
MsG0880042110.01.T01 MTR_8g018110 40.212 378 159 17 5 345 1 348 3.17e-66 214
MsG0880042110.01.T01 MTR_7g104710 43.902 328 123 9 1 309 1 286 1.52e-65 210
MsG0880042110.01.T01 MTR_5g092850 43.127 371 159 16 1 342 1 348 3.26e-65 212
MsG0880042110.01.T01 MTR_5g022850 40.058 347 136 8 11 342 11 300 4.61e-65 210
MsG0880042110.01.T01 MTR_5g064700 42.643 333 150 11 55 351 1 328 4.73e-64 208
MsG0880042110.01.T01 MTR_5g075370 43.923 362 153 16 13 342 5 348 3.83e-63 215
MsG0880042110.01.T01 MTR_5g096900 42.730 337 145 13 5 317 1 313 8.47e-63 203
MsG0880042110.01.T01 MTR_5g037190 45.745 282 100 9 1 262 1 249 1.84e-62 200
MsG0880042110.01.T01 MTR_8g033090 38.583 381 176 13 5 345 1 363 5.39e-62 204
MsG0880042110.01.T01 MTR_5g092860 41.317 334 143 14 35 345 21 324 1.11e-60 199
MsG0880042110.01.T01 MTR_1g098180 39.339 333 143 9 10 333 13 295 2.46e-60 198
MsG0880042110.01.T01 MTR_8g064790 39.481 347 124 12 14 345 13 288 7.60e-60 196
MsG0880042110.01.T01 MTR_1g050308 38.636 352 138 11 2 345 20 301 1.07e-58 193
MsG0880042110.01.T01 MTR_4g007940 39.088 307 143 10 66 345 4 293 1.84e-58 192
MsG0880042110.01.T01 MTR_6g079790 41.727 278 132 7 93 352 2 267 1.41e-57 189
MsG0880042110.01.T01 MTR_5g023970 67.626 139 40 2 210 345 10 146 8.01e-57 184
MsG0880042110.01.T01 MTR_7g023800 39.871 311 118 8 55 345 1 262 3.91e-56 186
MsG0880042110.01.T01 MTR_6g087620 40.288 278 114 5 81 345 1 239 1.29e-55 183
MsG0880042110.01.T01 MTR_8g063370 36.494 348 178 15 14 346 22 341 3.08e-55 186
MsG0880042110.01.T01 MTR_6g070880 43.600 250 109 9 5 232 21 260 7.53e-55 181
MsG0880042110.01.T01 MTR_6g071420 43.600 250 109 9 5 232 21 260 7.53e-55 181
MsG0880042110.01.T01 MTR_5g086590 45.833 216 105 5 138 352 13 217 2.14e-54 179
MsG0880042110.01.T01 MTR_2g104260 41.549 284 124 9 11 268 9 276 3.01e-53 177
MsG0880042110.01.T01 MTR_5g076490 39.490 314 134 9 53 341 1 283 3.11e-52 176
MsG0880042110.01.T01 MTR_5g094350 41.156 294 120 11 12 278 9 276 3.42e-51 172
MsG0880042110.01.T01 MTR_6g465360 48.039 204 80 5 4 190 50 244 8.78e-51 171
MsG0880042110.01.T01 MTR_8g063310 33.427 356 192 14 11 346 17 347 3.27e-50 173
MsG0880042110.01.T01 MTR_5g043605 36.735 343 136 10 12 345 21 291 2.19e-49 169
MsG0880042110.01.T01 MTR_1g050312 40.672 268 114 9 78 341 13 239 4.55e-49 166
MsG0880042110.01.T01 MTR_6g004450 49.206 189 77 6 165 345 43 220 1.23e-47 162
MsG0880042110.01.T01 MTR_8g033000 35.435 333 158 10 53 346 1 315 3.37e-47 164
MsG0880042110.01.T01 MTR_8g063350 32.370 346 155 13 16 346 14 295 1.10e-46 162
MsG0880042110.01.T01 MTR_5g098950 45.794 214 86 5 140 352 90 274 4.69e-46 158
MsG0880042110.01.T01 MTR_5g068490 43.137 255 102 11 90 339 8 224 9.71e-46 157
MsG0880042110.01.T01 MTR_4g016000 42.723 213 97 7 143 349 2 195 1.54e-45 155
MsG0880042110.01.T01 MTR_2g021920 48.691 191 81 5 171 345 37 226 1.26e-44 154
MsG0880042110.01.T01 MTR_5g097850 40.873 252 81 8 102 345 6 197 2.81e-44 153
MsG0880042110.01.T01 MTR_6g009350 46.842 190 82 7 166 345 3 183 2.26e-42 146
MsG0880042110.01.T01 MTR_6g090260 53.571 140 59 2 211 345 75 213 3.11e-41 145
MsG0880042110.01.T01 MTR_6g090260 62.903 62 22 1 5 65 8 69 2.99e-15 75.1
MsG0880042110.01.T01 MTR_1g115205 37.687 268 100 9 1 249 17 236 4.89e-38 137
MsG0880042110.01.T01 MTR_8g073570 44.262 183 80 6 8 182 2 170 1.96e-37 132
MsG0880042110.01.T01 MTR_5g097650 46.875 160 70 4 7 165 13 158 2.17e-37 132
MsG0880042110.01.T01 MTR_7g019250 43.655 197 93 5 152 345 206 387 4.53e-37 139
MsG0880042110.01.T01 MTR_3g018750 43.005 193 83 5 170 342 2 187 2.91e-34 126
MsG0880042110.01.T01 MTR_5g097540 48.276 145 66 4 210 352 96 233 8.31e-33 124
MsG0880042110.01.T01 MTR_8g035690 40.639 219 79 11 149 332 38 240 1.26e-31 121
MsG0880042110.01.T01 MTR_4g014370 45.342 161 71 5 193 345 137 288 4.51e-30 117
MsG0880042110.01.T01 MTR_4g014370 45.600 125 58 2 7 121 13 137 2.15e-21 94.0
MsG0880042110.01.T01 MTR_8g041440 61.224 98 26 2 1 98 1 86 1.09e-29 110
MsG0880042110.01.T01 MTR_3g019290 35.780 218 97 5 3 217 1 178 2.52e-29 111
MsG0880042110.01.T01 MTR_5g096070 42.308 182 67 7 2 179 12 159 5.50e-29 110
MsG0880042110.01.T01 MTR_7g017150 47.020 151 68 5 203 347 74 218 1.06e-28 112
MsG0880042110.01.T01 MTR_7g101200 38.565 223 98 12 131 345 31 222 1.16e-28 111
MsG0880042110.01.T01 MTR_7g017120 47.619 147 65 5 207 347 77 217 2.00e-28 111
MsG0880042110.01.T01 MTR_5g096920 52.830 106 45 3 242 345 1 103 2.46e-27 105
MsG0880042110.01.T01 MTR_1g047080 33.051 236 112 10 53 275 1 203 1.81e-25 104
MsG0880042110.01.T01 MTR_5g096050 45.833 120 50 2 242 347 1 119 2.69e-25 99.0
MsG0880042110.01.T01 MTR_5g057790 28.750 320 179 13 24 333 54 334 3.37e-25 105
MsG0880042110.01.T01 MTR_5g066420 49.153 118 53 2 242 352 1 118 8.89e-25 98.6
MsG0880042110.01.T01 MTR_5g091150 34.043 235 80 9 93 302 2 186 3.20e-24 98.6
MsG0880042110.01.T01 MTR_3g014540 28.280 343 196 14 19 350 32 335 1.51e-23 100
MsG0880042110.01.T01 MTR_3g013740 27.350 351 198 12 5 334 33 347 1.58e-23 100
MsG0880042110.01.T01 MTR_5g057710 28.037 321 182 14 24 334 54 335 4.19e-23 99.8
MsG0880042110.01.T01 MTR_2g426060 28.793 323 189 15 24 329 14 312 1.07e-22 98.6
MsG0880042110.01.T01 MTR_5g086780 51.087 92 44 1 254 345 113 203 2.20e-22 94.4
MsG0880042110.01.T01 MTR_5g086780 66.071 56 19 0 1 56 1 56 1.05e-13 70.1
MsG0880042110.01.T01 MTR_5g086780 37.500 88 53 1 110 197 38 123 3.55e-12 65.9
MsG0880042110.01.T01 MTR_3g030620 47.863 117 52 4 239 347 20 135 2.33e-22 93.2
MsG0880042110.01.T01 MTR_2g028130 24.928 349 224 13 19 350 8 335 8.21e-22 95.9
MsG0880042110.01.T01 MTR_7g070440 27.607 326 193 13 16 327 7 303 1.89e-21 94.7
MsG0880042110.01.T01 MTR_6g079730 55.056 89 39 1 257 345 14 101 2.23e-21 89.4
MsG0880042110.01.T01 MTR_2g031720 24.451 319 205 8 19 329 9 299 2.33e-21 94.7
MsG0880042110.01.T01 MTR_0667s0010 24.771 327 215 12 12 329 2 306 2.88e-21 94.4
MsG0880042110.01.T01 MTR_5g094360 51.000 100 43 4 148 244 40 136 4.25e-21 89.0
MsG0880042110.01.T01 MTR_3g083010 26.506 332 194 15 24 329 14 321 4.33e-21 94.0
MsG0880042110.01.T01 MTR_3g047580 38.028 142 59 4 13 151 11 126 4.72e-21 87.8
MsG0880042110.01.T01 MTR_1g097560 27.044 318 191 11 13 329 33 310 5.87e-21 93.2
MsG0880042110.01.T01 MTR_3g014570 27.692 325 182 13 19 330 32 316 6.28e-21 93.2
MsG0880042110.01.T01 MTR_2g021150 27.164 335 189 14 18 336 16 311 1.36e-20 92.0
MsG0880042110.01.T01 MTR_5g097660 58.974 78 31 1 276 352 1 78 1.85e-20 86.3
MsG0880042110.01.T01 MTR_2g425980 26.140 329 201 13 19 329 8 312 7.56e-20 90.5
MsG0880042110.01.T01 MTR_2g021050 27.302 315 178 12 24 329 13 285 8.94e-20 89.7
MsG0880042110.01.T01 MTR_2g028110 27.077 325 202 12 24 340 12 309 8.95e-20 89.7
MsG0880042110.01.T01 MTR_2g024110 26.667 315 185 12 24 327 12 291 1.39e-19 89.4
MsG0880042110.01.T01 MTR_4g094400 49.057 106 36 3 239 327 7 111 2.10e-19 83.6
MsG0880042110.01.T01 MTR_3g013770 28.205 351 190 17 19 350 36 343 3.02e-19 88.6
MsG0880042110.01.T01 MTR_4g055060 27.190 331 179 15 24 334 38 326 4.72e-19 87.8
MsG0880042110.01.T01 MTR_1g094210 26.176 340 187 15 18 348 59 343 5.00e-19 87.8
MsG0880042110.01.T01 MTR_3g006670 27.844 334 184 16 19 338 52 342 5.48e-19 87.8
MsG0880042110.01.T01 MTR_1g094210 26.254 339 186 15 18 347 59 342 8.65e-19 87.4
MsG0880042110.01.T01 MTR_4g133170 24.294 354 208 13 19 352 7 320 1.00e-18 87.0
MsG0880042110.01.T01 MTR_4g023070 25.155 322 198 12 25 337 12 299 1.07e-18 86.7
MsG0880042110.01.T01 MTR_2g029990 26.250 320 182 13 24 329 59 338 2.06e-18 86.3
MsG0880042110.01.T01 MTR_4g023120 24.839 310 196 10 25 329 12 289 4.39e-18 84.7
MsG0880042110.01.T01 MTR_5g049560 36.538 156 68 5 53 186 1 147 4.91e-18 83.2
MsG0880042110.01.T01 MTR_4g021785 26.959 319 171 11 24 329 17 286 1.44e-17 83.2
MsG0880042110.01.T01 MTR_3g011060 27.729 339 194 15 24 348 36 337 1.65e-17 83.2
MsG0880042110.01.T01 MTR_2g426070 24.924 329 195 13 24 329 14 313 1.81e-17 83.2
MsG0880042110.01.T01 MTR_1g054575 26.183 317 190 11 18 329 54 331 2.89e-17 83.6
MsG0880042110.01.T01 MTR_1g068835 25.786 318 188 12 24 330 12 292 3.58e-17 82.4
MsG0880042110.01.T01 MTR_2g028140 25.424 354 216 15 24 352 13 343 4.91e-17 82.0
MsG0880042110.01.T01 MTR_3g436150 28.788 330 183 13 19 329 35 331 8.37e-17 81.3
MsG0880042110.01.T01 MTR_5g057690 25.846 325 172 14 24 333 54 324 9.04e-17 81.3
MsG0880042110.01.T01 MTR_4g070550 25.305 328 198 15 24 329 13 315 1.31e-16 80.9
MsG0880042110.01.T01 MTR_3g024040 27.331 311 178 14 24 330 39 305 1.44e-16 80.5
MsG0880042110.01.T01 MTR_2g426020 26.220 328 186 15 24 329 14 307 1.55e-16 80.5
MsG0880042110.01.T01 MTR_4g023080 27.217 327 171 13 24 334 17 292 1.64e-16 80.1
MsG0880042110.01.T01 MTR_3g006570 26.822 343 198 20 19 350 24 324 3.23e-16 79.3
MsG0880042110.01.T01 MTR_3g047540 47.436 78 39 2 209 285 4 80 3.28e-16 73.6
MsG0880042110.01.T01 MTR_3g034130 24.765 319 199 11 24 330 17 306 9.18e-16 78.2
MsG0880042110.01.T01 MTR_4g094365 27.157 313 187 11 24 329 16 294 1.12e-15 77.8
MsG0880042110.01.T01 MTR_4g117780 29.876 241 132 10 19 255 14 221 2.25e-15 76.6
MsG0880042110.01.T01 MTR_1g068860 26.316 323 182 13 24 330 12 294 2.70e-15 76.6
MsG0880042110.01.T01 MTR_4g023090 28.135 327 178 17 24 334 24 309 3.23e-15 76.6
MsG0880042110.01.T01 MTR_5g057020 24.923 325 170 13 24 333 54 319 3.38e-15 76.3
MsG0880042110.01.T01 MTR_4g117770 30.522 249 114 12 15 248 10 214 6.41e-15 75.5
MsG0880042110.01.T01 MTR_4g117810 30.522 249 114 12 15 248 10 214 6.41e-15 75.5
MsG0880042110.01.T01 MTR_5g036250 64.815 54 19 0 292 345 10 63 8.66e-15 72.4
MsG0880042110.01.T01 MTR_2g078900 25.723 346 198 15 19 352 36 334 1.36e-14 74.3
MsG0880042110.01.T01 MTR_2g025960 25.652 230 139 10 113 329 5 215 1.43e-14 73.9
MsG0880042110.01.T01 MTR_3g058480 26.894 264 153 16 24 274 47 283 1.68e-14 73.9
MsG0880042110.01.T01 MTR_6g065980 25.000 328 179 15 19 334 19 291 2.74e-14 73.6
MsG0880042110.01.T01 MTR_6g048140 26.316 342 188 16 24 347 47 342 4.47e-14 73.2
MsG0880042110.01.T01 MTR_1g068875 24.684 316 193 12 24 330 12 291 5.75e-14 72.8
MsG0880042110.01.T01 MTR_3g009240 26.074 326 188 16 19 334 39 321 6.28e-14 72.8
MsG0880042110.01.T01 MTR_1g009110 25.070 355 195 16 8 333 5 317 6.75e-14 72.4
MsG0880042110.01.T01 MTR_4g061340 26.190 336 188 17 24 341 34 327 9.20e-14 72.0
MsG0880042110.01.T01 MTR_0064s0160 24.722 360 234 13 1 340 27 369 1.19e-13 72.0
MsG0880042110.01.T01 MTR_6g053240 26.667 315 192 12 24 329 36 320 1.30e-13 71.6
MsG0880042110.01.T01 MTR_0044s0300 26.126 333 180 13 19 334 41 324 1.34e-13 71.6
MsG0880042110.01.T01 MTR_6g087660 54.430 79 32 3 1 75 1 79 1.52e-13 68.9
MsG0880042110.01.T01 MTR_2g046900 26.284 331 195 15 18 335 30 324 1.62e-13 71.2
MsG0880042110.01.T01 MTR_1g097330 26.524 328 165 16 24 329 24 297 2.85e-13 70.9
MsG0880042110.01.T01 MTR_1g050542 26.019 319 188 13 18 330 60 336 3.02e-13 70.9
MsG0880042110.01.T01 MTR_3g024150 26.730 318 177 14 24 329 43 316 3.10e-13 70.5
MsG0880042110.01.T01 MTR_2g021190 25.000 324 193 14 24 335 29 314 3.26e-13 70.5
MsG0880042110.01.T01 MTR_4g023380 24.128 344 190 13 30 350 30 325 3.29e-13 70.5
MsG0880042110.01.T01 MTR_3g007330 25.526 333 196 13 24 347 56 345 3.79e-13 70.5
MsG0880042110.01.T01 MTR_8g041490 41.414 99 37 3 1 99 1 78 3.79e-13 65.5
MsG0880042110.01.T01 MTR_6g048120 27.077 325 180 18 24 329 44 330 4.07e-13 70.5
MsG0880042110.01.T01 MTR_3g058440 27.106 273 162 14 24 286 43 288 4.08e-13 69.7
MsG0880042110.01.T01 MTR_3g007430 25.316 316 188 14 24 329 51 328 4.61e-13 70.1
MsG0880042110.01.T01 MTR_1g097490 25.602 332 203 13 4 329 36 329 5.53e-13 69.7
MsG0880042110.01.T01 MTR_2g031680 25.360 347 204 17 24 352 14 323 8.05e-13 69.3
MsG0880042110.01.T01 MTR_2g021252 25.879 313 178 15 24 329 55 320 1.00e-12 68.9
MsG0880042110.01.T01 MTR_3g011100 25.970 335 195 15 24 343 243 539 1.38e-12 69.3
MsG0880042110.01.T01 MTR_4g080200 26.642 274 140 12 18 273 5 235 1.86e-12 68.2
MsG0880042110.01.T01 MTR_4g023150 26.586 331 187 16 11 330 5 290 1.96e-12 67.8
MsG0880042110.01.T01 MTR_7g013590 25.767 326 187 15 19 329 39 324 2.18e-12 68.2
MsG0880042110.01.T01 MTR_5g070080 26.012 346 178 16 24 333 18 321 2.66e-12 67.8
MsG0880042110.01.T01 MTR_3g010450 25.581 215 125 9 78 291 59 239 2.91e-12 66.2
MsG0880042110.01.T01 MTR_4g023130 24.000 325 143 11 24 334 17 251 3.21e-12 67.0
MsG0880042110.01.T01 MTR_6g053260 25.595 336 203 17 6 329 324 624 3.27e-12 68.2
MsG0880042110.01.T01 MTR_5g097210 23.881 335 194 12 19 337 12 301 3.52e-12 67.4
MsG0880042110.01.T01 MTR_6g004660 24.425 348 210 15 24 352 24 337 4.68e-12 67.0
MsG0880042110.01.T01 MTR_4g117750 27.215 316 176 14 29 330 16 291 5.19e-12 67.0
MsG0880042110.01.T01 MTR_5g057643 29.697 165 99 5 24 185 54 204 5.21e-12 65.9
MsG0880042110.01.T01 MTR_5g007610 25.141 354 196 17 19 347 44 353 5.27e-12 67.0
MsG0880042110.01.T01 MTR_2g026010 26.295 251 150 13 125 352 90 328 7.84e-12 66.2
MsG0880042110.01.T01 MTR_2g046830 24.773 331 196 16 16 335 25 313 7.96e-12 66.2
MsG0880042110.01.T01 MTR_1g112930 24.340 341 198 15 24 352 33 325 1.19e-11 65.9
MsG0880042110.01.T01 MTR_0760s0010 25.641 312 174 13 24 325 55 318 1.34e-11 65.5
MsG0880042110.01.T01 MTR_1g055135 23.739 337 208 13 6 328 3 304 1.72e-11 65.1
MsG0880042110.01.T01 MTR_1g050305 65.957 47 14 1 295 339 21 67 1.98e-11 61.6
MsG0880042110.01.T01 MTR_3g009300 25.000 252 149 12 99 343 84 302 2.36e-11 64.7
MsG0880042110.01.T01 MTR_1g061330 23.837 344 186 13 24 340 12 306 3.05e-11 64.7
MsG0880042110.01.T01 MTR_4g023200 26.437 261 147 11 30 283 24 246 3.09e-11 64.3
MsG0880042110.01.T01 MTR_3g007270 25.278 360 172 17 19 338 50 352 3.13e-11 64.7
MsG0880042110.01.T01 MTR_3g030350 24.688 320 193 13 19 330 38 317 3.43e-11 64.3
MsG0880042110.01.T01 MTR_4g023190 25.301 332 189 12 11 330 5 289 3.46e-11 64.3
MsG0880042110.01.T01 MTR_5g022420 24.684 316 190 12 18 329 29 300 4.84e-11 63.9
MsG0880042110.01.T01 MTR_6g021880 25.625 320 187 18 27 329 31 316 5.68e-11 63.5
MsG0880042110.01.T01 MTR_2g047832 24.566 346 194 14 18 335 31 337 6.11e-11 63.5
MsG0880042110.01.T01 MTR_5g048160 25.979 281 152 11 24 273 12 267 6.73e-11 63.5
MsG0880042110.01.T01 MTR_2g046920 24.465 327 198 14 18 335 26 312 6.96e-11 63.5
MsG0880042110.01.T01 MTR_7g070830 21.644 365 231 11 1 330 6 350 7.92e-11 63.5
MsG0880042110.01.T01 MTR_3g036335 24.684 316 186 14 24 327 49 324 8.75e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042110.01.T01 AT3G06240 25.223 337 197 14 24 328 44 357 2.27e-15 77.4
MsG0880042110.01.T01 AT4G12560 23.932 351 218 13 19 352 7 325 3.02e-12 67.8
MsG0880042110.01.T01 AT4G12560 23.932 351 218 13 19 352 7 325 3.02e-12 67.8
MsG0880042110.01.T01 AT4G12560 23.932 351 218 13 19 352 7 325 3.02e-12 67.8
MsG0880042110.01.T01 AT3G21120 26.117 291 143 13 15 278 2 247 2.65e-11 64.7
MsG0880042110.01.T01 AT3G16210 24.345 267 152 11 12 273 1 222 9.91e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAACATGTCCATGAAATA+AGG 0.195148 8:+3821404 None:intergenic
AGACACTTAAACGTGTTAAA+TGG 0.237056 8:-3820690 MsG0880042110.01.T01:CDS
TATGGTTGTGCTAGTGTTAA+TGG 0.250234 8:-3821224 MsG0880042110.01.T01:CDS
ATGATTGATCTTCATGGATT+TGG 0.258316 8:-3821053 MsG0880042110.01.T01:CDS
AACACCCATACCTTCAAATA+TGG 0.266406 8:-3820745 MsG0880042110.01.T01:CDS
TGAAAGTGATGAAGTTTATT+TGG 0.268640 8:-3820802 MsG0880042110.01.T01:CDS
CCTGACATTGAGTATCCTAT+TGG 0.300899 8:-3820555 MsG0880042110.01.T01:CDS
ATTTGAAAACCCTTATTTCA+TGG 0.311631 8:-3821414 MsG0880042110.01.T01:CDS
AATTGCTCTTCATACGGATT+TGG 0.321953 8:+3821260 None:intergenic
CGGGGAGAGGTTCGAGAATA+GGG 0.323762 8:-3821297 MsG0880042110.01.T01:CDS
TATGTGATTGCTAACCTTTA+CGG 0.330883 8:+3821526 None:intergenic
ATTGAGTATCCTATTGGAAT+TGG 0.339468 8:-3820549 MsG0880042110.01.T01:CDS
TTGAAGACGCTGGGAGAATT+GGG 0.339749 8:-3821190 MsG0880042110.01.T01:CDS
ATCATCCATATTTGAAGGTA+TGG 0.341553 8:+3820740 None:intergenic
ATTGAAGACGCTGGGAGAAT+TGG 0.365110 8:-3821191 MsG0880042110.01.T01:CDS
TGTTAAATGGATCAATTGTA+TGG 0.372520 8:-3820677 MsG0880042110.01.T01:CDS
GATCCCATGATTGATCTTCA+TGG 0.373380 8:-3821059 MsG0880042110.01.T01:CDS
TGCGTTTGAATCTCCATGTT+GGG 0.373832 8:-3821081 MsG0880042110.01.T01:CDS
AGGACCTACAATAAAGAGTT+TGG 0.390686 8:+3820581 None:intergenic
TCCTATGACCGACGCAGATT+GGG 0.391203 8:-3820979 MsG0880042110.01.T01:CDS
GAAACATGTCCATGAAATAA+GGG 0.393901 8:+3821405 None:intergenic
TGGACCAAACTCTTTATTGT+AGG 0.395533 8:-3820585 MsG0880042110.01.T01:CDS
TCGGGGAGAGGTTCGAGAAT+AGG 0.401495 8:-3821298 MsG0880042110.01.T01:CDS
CCAAGTTAGAGATGACTATA+AGG 0.404187 8:-3821024 MsG0880042110.01.T01:CDS
CTTCAAGATGGAGATATCAT+TGG 0.416826 8:-3821558 None:intergenic
CCTTATAGTCATCTCTAACT+TGG 0.418539 8:+3821024 None:intergenic
TCCCAATCTGCGTCGGTCAT+AGG 0.431289 8:+3820978 None:intergenic
AAATCCATGAAGATCAATCA+TGG 0.446643 8:+3821055 None:intergenic
TTCCTATGACCGACGCAGAT+TGG 0.453927 8:-3820980 MsG0880042110.01.T01:CDS
GATTCAAACGCAAAGGGACT+AGG 0.462851 8:+3821092 None:intergenic
AAATCAAATTGCTCTTCATA+CGG 0.463326 8:+3821254 None:intergenic
TGGATATCACTCTTCCTTGT+GGG 0.473460 8:-3820940 MsG0880042110.01.T01:CDS
TGGGAGGAGACATGGAAAGA+TGG 0.479534 8:-3820960 MsG0880042110.01.T01:CDS
CCAATAGGATACTCAATGTC+AGG 0.481231 8:+3820555 None:intergenic
TTGCGTTTGAATCTCCATGT+TGG 0.488429 8:-3821082 MsG0880042110.01.T01:CDS
ATTCATTGCATTGAAGAACT+AGG 0.491845 8:-3821164 MsG0880042110.01.T01:CDS
TCATTATCATCCATATTTGA+AGG 0.493403 8:+3820735 None:intergenic
ACATGGATGGAGTGTGTCAC+TGG 0.496611 8:-3820830 MsG0880042110.01.T01:CDS
TTCTTTGTATTGAAGACGCT+GGG 0.504059 8:-3821199 MsG0880042110.01.T01:CDS
AATTGATATGTGGAAAGTAC+CGG 0.516109 8:+3820635 None:intergenic
TCATCCATATTTGAAGGTAT+GGG 0.520996 8:+3820741 None:intergenic
GCCCTCTTGCCAATTCCAAT+AGG 0.525255 8:+3820540 None:intergenic
ATGCCTACACAATATAATAG+TGG 0.525261 8:-3820870 MsG0880042110.01.T01:CDS
TTCATTGCATTGAAGAACTA+GGG 0.525277 8:-3821163 MsG0880042110.01.T01:CDS
TTTGTTGTGTGCGCAAATCA+TGG 0.531217 8:-3821445 MsG0880042110.01.T01:CDS
AACTAGGGAGAGTTGTATTG+TGG 0.532889 8:-3821148 MsG0880042110.01.T01:CDS
CATGGAGATTCAAACGCAAA+GGG 0.554508 8:+3821086 None:intergenic
ACTTTGAATTCACCAGTGGT+TGG 0.554522 8:+3821122 None:intergenic
ACGCAGATTGGGAGGAGACA+TGG 0.564861 8:-3820968 MsG0880042110.01.T01:CDS
AGAATAGGGTCAAATTAGAC+TGG 0.566803 8:-3821283 MsG0880042110.01.T01:CDS
TGTGGGTGTTCAAGTGTACA+TGG 0.568757 8:-3820847 MsG0880042110.01.T01:CDS
TAATTTAGACAGAATGAAGA+AGG 0.569770 8:+3821490 None:intergenic
ATTTCAAATTATGCAGAGAC+CGG 0.573330 8:-3820654 MsG0880042110.01.T01:CDS
CTTCACCTAAAATTGATATG+TGG 0.578297 8:+3820625 None:intergenic
ACACAATATAATAGTGGTGT+GGG 0.579381 8:-3820864 MsG0880042110.01.T01:CDS
TGAAGACGCTGGGAGAATTG+GGG 0.583801 8:-3821189 MsG0880042110.01.T01:CDS
TGTCTCCTCCCAATCTGCGT+CGG 0.584210 8:+3820971 None:intergenic
ATTGGCTTCAGCGACCGTAA+AGG 0.584309 8:-3821540 MsG0880042110.01.T01:CDS
AATCCATGAAGATCAATCAT+GGG 0.590141 8:+3821056 None:intergenic
AAGTTGGGGTCAAAGAGTCA+TGG 0.590422 8:-3820605 MsG0880042110.01.T01:CDS
GGATACTCAATGTCAGGCAA+AGG 0.593137 8:+3820561 None:intergenic
ATGGATATCACTCTTCCTTG+TGG 0.595355 8:-3820941 MsG0880042110.01.T01:CDS
TCCTATTGGAATTGGCAAGA+GGG 0.596076 8:-3820541 MsG0880042110.01.T01:CDS
ACATGGAGATTCAAACGCAA+AGG 0.596557 8:+3821085 None:intergenic
ATTCTTTGTATTGAAGACGC+TGG 0.604321 8:-3821200 MsG0880042110.01.T01:CDS
TATGACCGACGCAGATTGGG+AGG 0.605254 8:-3820976 MsG0880042110.01.T01:CDS
ACTCGTATTCATCATGCAAG+AGG 0.608817 8:+3821333 None:intergenic
GAAGACGCTGGGAGAATTGG+GGG 0.609754 8:-3821188 MsG0880042110.01.T01:CDS
TACACAATATAATAGTGGTG+TGG 0.612128 8:-3820865 MsG0880042110.01.T01:CDS
AATCGAAACAAAGATTTGAG+AGG 0.620876 8:+3821467 None:intergenic
GGTGTTCAAGTGTACATGGA+TGG 0.620943 8:-3820843 MsG0880042110.01.T01:CDS
TCAATCATGGGATCCCAACA+TGG 0.623291 8:+3821068 None:intergenic
ATCCTATTGGAATTGGCAAG+AGG 0.625806 8:-3820542 MsG0880042110.01.T01:CDS
AGTGACTTTGAATTCACCAG+TGG 0.643912 8:+3821118 None:intergenic
TCAAACGCAAAGGGACTAGG+AGG 0.652078 8:+3821095 None:intergenic
ACACCACTATTATATTGTGT+AGG 0.662574 8:+3820867 None:intergenic
TGGATGGAGTGTGTCACTGG+TGG 0.662912 8:-3820827 MsG0880042110.01.T01:CDS
GTCATTTGAATTGATCAATG+AGG 0.666193 8:-3820778 MsG0880042110.01.T01:CDS
TAGAGAATATATCTCCCACA+AGG 0.672940 8:+3820926 None:intergenic
GTATTGTGGAATCCAACCAC+TGG 0.681992 8:-3821134 MsG0880042110.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTGATTTTAATATTTA+TGG - Chr8:3820824-3820843 MsG0880042110.01.T01:CDS 10.0%
!!! ATTCTCTAAAAAGTAATTCT+TGG - Chr8:3821155-3821174 MsG0880042110.01.T01:CDS 20.0%
! AAATCAAATTGCTCTTCATA+CGG + Chr8:3820815-3820834 None:intergenic 25.0%
! TAATTTAGACAGAATGAAGA+AGG + Chr8:3820579-3820598 None:intergenic 25.0%
! TCATAGGAAAAAACATTACA+TGG + Chr8:3821075-3821094 None:intergenic 25.0%
! TCATTATCATCCATATTTGA+AGG + Chr8:3821334-3821353 None:intergenic 25.0%
! TGAAAGTGATGAAGTTTATT+TGG - Chr8:3821264-3821283 MsG0880042110.01.T01:CDS 25.0%
! TGTTAAATGGATCAATTGTA+TGG - Chr8:3821389-3821408 MsG0880042110.01.T01:CDS 25.0%
!! ACTTTCCACATATCAATTTT+AGG - Chr8:3821436-3821455 MsG0880042110.01.T01:CDS 25.0%
!! ATTTGAAAACCCTTATTTCA+TGG - Chr8:3820652-3820671 MsG0880042110.01.T01:CDS 25.0%
!!! ATATCAATTTTAGGTGAAGT+TGG - Chr8:3821445-3821464 MsG0880042110.01.T01:CDS 25.0%
!!! TATCAATTTTAGGTGAAGTT+GGG - Chr8:3821446-3821465 MsG0880042110.01.T01:CDS 25.0%
AAATCCATGAAGATCAATCA+TGG + Chr8:3821014-3821033 None:intergenic 30.0%
AATCCATGAAGATCAATCAT+GGG + Chr8:3821013-3821032 None:intergenic 30.0%
AATCGAAACAAAGATTTGAG+AGG + Chr8:3820602-3820621 None:intergenic 30.0%
ACACAATATAATAGTGGTGT+GGG - Chr8:3821202-3821221 MsG0880042110.01.T01:CDS 30.0%
ACACCACTATTATATTGTGT+AGG + Chr8:3821202-3821221 None:intergenic 30.0%
AGACACTTAAACGTGTTAAA+TGG - Chr8:3821376-3821395 MsG0880042110.01.T01:CDS 30.0%
ATCATCCATATTTGAAGGTA+TGG + Chr8:3821329-3821348 None:intergenic 30.0%
ATGATTGATCTTCATGGATT+TGG - Chr8:3821013-3821032 MsG0880042110.01.T01:CDS 30.0%
ATGCCTACACAATATAATAG+TGG - Chr8:3821196-3821215 MsG0880042110.01.T01:CDS 30.0%
ATTCATTGCATTGAAGAACT+AGG - Chr8:3820902-3820921 MsG0880042110.01.T01:CDS 30.0%
ATTGAGTATCCTATTGGAAT+TGG - Chr8:3821517-3821536 MsG0880042110.01.T01:CDS 30.0%
ATTTCAAATTATGCAGAGAC+CGG - Chr8:3821412-3821431 MsG0880042110.01.T01:CDS 30.0%
CTTCACCTAAAATTGATATG+TGG + Chr8:3821444-3821463 None:intergenic 30.0%
GAAACATGTCCATGAAATAA+GGG + Chr8:3820664-3820683 None:intergenic 30.0%
GTCATTTGAATTGATCAATG+AGG - Chr8:3821288-3821307 MsG0880042110.01.T01:CDS 30.0%
TACACAATATAATAGTGGTG+TGG - Chr8:3821201-3821220 MsG0880042110.01.T01:CDS 30.0%
TATGTGATTGCTAACCTTTA+CGG + Chr8:3820543-3820562 None:intergenic 30.0%
TTCATTGCATTGAAGAACTA+GGG - Chr8:3820903-3820922 MsG0880042110.01.T01:CDS 30.0%
! AATTGATATGTGGAAAGTAC+CGG + Chr8:3821434-3821453 None:intergenic 30.0%
! TACGAGTTGTATTCTCTTTT+CGG - Chr8:3820749-3820768 MsG0880042110.01.T01:CDS 30.0%
! TCATCCATATTTGAAGGTAT+GGG + Chr8:3821328-3821347 None:intergenic 30.0%
!! ATCAATTTTAGGTGAAGTTG+GGG - Chr8:3821447-3821466 MsG0880042110.01.T01:CDS 30.0%
AACACCCATACCTTCAAATA+TGG - Chr8:3821321-3821340 MsG0880042110.01.T01:CDS 35.0%
AATTGCTCTTCATACGGATT+TGG + Chr8:3820809-3820828 None:intergenic 35.0%
AGAATAGGGTCAAATTAGAC+TGG - Chr8:3820783-3820802 MsG0880042110.01.T01:CDS 35.0%
AGGACCTACAATAAAGAGTT+TGG + Chr8:3821488-3821507 None:intergenic 35.0%
ATTCTTTGTATTGAAGACGC+TGG - Chr8:3820866-3820885 MsG0880042110.01.T01:CDS 35.0%
CCAAGTTAGAGATGACTATA+AGG - Chr8:3821042-3821061 MsG0880042110.01.T01:CDS 35.0%
CCTTATAGTCATCTCTAACT+TGG + Chr8:3821045-3821064 None:intergenic 35.0%
CGAAACATGTCCATGAAATA+AGG + Chr8:3820665-3820684 None:intergenic 35.0%
TAGAGAATATATCTCCCACA+AGG + Chr8:3821143-3821162 None:intergenic 35.0%
TATGGTTGTGCTAGTGTTAA+TGG - Chr8:3820842-3820861 MsG0880042110.01.T01:CDS 35.0%
TGGACCAAACTCTTTATTGT+AGG - Chr8:3821481-3821500 MsG0880042110.01.T01:CDS 35.0%
TTCTTTGTATTGAAGACGCT+GGG - Chr8:3820867-3820886 MsG0880042110.01.T01:CDS 35.0%
! ACGAGTTGTATTCTCTTTTC+GGG - Chr8:3820750-3820769 MsG0880042110.01.T01:CDS 35.0%
AACTAGGGAGAGTTGTATTG+TGG - Chr8:3820918-3820937 MsG0880042110.01.T01:CDS 40.0%
ACATGGAGATTCAAACGCAA+AGG + Chr8:3820984-3821003 None:intergenic 40.0%
ACTCGTATTCATCATGCAAG+AGG + Chr8:3820736-3820755 None:intergenic 40.0%
ACTTTGAATTCACCAGTGGT+TGG + Chr8:3820947-3820966 None:intergenic 40.0%
AGTGACTTTGAATTCACCAG+TGG + Chr8:3820951-3820970 None:intergenic 40.0%
ATCCTATTGGAATTGGCAAG+AGG - Chr8:3821524-3821543 MsG0880042110.01.T01:CDS 40.0%
ATGGATATCACTCTTCCTTG+TGG - Chr8:3821125-3821144 MsG0880042110.01.T01:CDS 40.0%
CATGGAGATTCAAACGCAAA+GGG + Chr8:3820983-3821002 None:intergenic 40.0%
CCAATAGGATACTCAATGTC+AGG + Chr8:3821514-3821533 None:intergenic 40.0%
CCTGACATTGAGTATCCTAT+TGG - Chr8:3821511-3821530 MsG0880042110.01.T01:CDS 40.0%
GATCCCATGATTGATCTTCA+TGG - Chr8:3821007-3821026 MsG0880042110.01.T01:CDS 40.0%
TCCTATTGGAATTGGCAAGA+GGG - Chr8:3821525-3821544 MsG0880042110.01.T01:CDS 40.0%
TGCGTTTGAATCTCCATGTT+GGG - Chr8:3820985-3821004 MsG0880042110.01.T01:CDS 40.0%
TGGATATCACTCTTCCTTGT+GGG - Chr8:3821126-3821145 MsG0880042110.01.T01:CDS 40.0%
TTGCGTTTGAATCTCCATGT+TGG - Chr8:3820984-3821003 MsG0880042110.01.T01:CDS 40.0%
! CGAGTTGTATTCTCTTTTCG+GGG - Chr8:3820751-3820770 MsG0880042110.01.T01:CDS 40.0%
! TTTGTTGTGTGCGCAAATCA+TGG - Chr8:3820621-3820640 MsG0880042110.01.T01:CDS 40.0%
AAGTTGGGGTCAAAGAGTCA+TGG - Chr8:3821461-3821480 MsG0880042110.01.T01:CDS 45.0%
ATTGAAGACGCTGGGAGAAT+TGG - Chr8:3820875-3820894 MsG0880042110.01.T01:CDS 45.0%
GATTCAAACGCAAAGGGACT+AGG + Chr8:3820977-3820996 None:intergenic 45.0%
GGATACTCAATGTCAGGCAA+AGG + Chr8:3821508-3821527 None:intergenic 45.0%
GGTGTTCAAGTGTACATGGA+TGG - Chr8:3821223-3821242 MsG0880042110.01.T01:CDS 45.0%
GTATTGTGGAATCCAACCAC+TGG - Chr8:3820932-3820951 MsG0880042110.01.T01:CDS 45.0%
TCAATCATGGGATCCCAACA+TGG + Chr8:3821001-3821020 None:intergenic 45.0%
TGTGGGTGTTCAAGTGTACA+TGG - Chr8:3821219-3821238 MsG0880042110.01.T01:CDS 45.0%
TTGAAGACGCTGGGAGAATT+GGG - Chr8:3820876-3820895 MsG0880042110.01.T01:CDS 45.0%
!! TGTATTCTCTTTTCGGGGAG+AGG - Chr8:3820756-3820775 MsG0880042110.01.T01:CDS 45.0%
ACATGGATGGAGTGTGTCAC+TGG - Chr8:3821236-3821255 MsG0880042110.01.T01:CDS 50.0%
GCCCTCTTGCCAATTCCAAT+AGG + Chr8:3821529-3821548 None:intergenic 50.0%
TCAAACGCAAAGGGACTAGG+AGG + Chr8:3820974-3820993 None:intergenic 50.0%
TCCTATGACCGACGCAGATT+GGG - Chr8:3821087-3821106 MsG0880042110.01.T01:CDS 50.0%
TGAAGACGCTGGGAGAATTG+GGG - Chr8:3820877-3820896 MsG0880042110.01.T01:CDS 50.0%
TGGGAGGAGACATGGAAAGA+TGG - Chr8:3821106-3821125 MsG0880042110.01.T01:CDS 50.0%
TTCCTATGACCGACGCAGAT+TGG - Chr8:3821086-3821105 MsG0880042110.01.T01:CDS 50.0%
! ATTGGCTTCAGCGACCGTAA+AGG - Chr8:3820526-3820545 MsG0880042110.01.T01:CDS 50.0%
ACGCAGATTGGGAGGAGACA+TGG - Chr8:3821098-3821117 MsG0880042110.01.T01:CDS 55.0%
CGGGGAGAGGTTCGAGAATA+GGG - Chr8:3820769-3820788 MsG0880042110.01.T01:CDS 55.0%
GAAGACGCTGGGAGAATTGG+GGG - Chr8:3820878-3820897 MsG0880042110.01.T01:CDS 55.0%
TATGACCGACGCAGATTGGG+AGG - Chr8:3821090-3821109 MsG0880042110.01.T01:CDS 55.0%
TCGGGGAGAGGTTCGAGAAT+AGG - Chr8:3820768-3820787 MsG0880042110.01.T01:CDS 55.0%
TGTCTCCTCCCAATCTGCGT+CGG + Chr8:3821098-3821117 None:intergenic 55.0%
! TCCCAATCTGCGTCGGTCAT+AGG + Chr8:3821091-3821110 None:intergenic 55.0%
! TGGATGGAGTGTGTCACTGG+TGG - Chr8:3821239-3821258 MsG0880042110.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3820515 3821573 3820515 ID=MsG0880042110.01;Name=MsG0880042110.01
Chr8 mRNA 3820515 3821573 3820515 ID=MsG0880042110.01.T01;Parent=MsG0880042110.01;Name=MsG0880042110.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|352
Chr8 exon 3820515 3821573 3820515 ID=MsG0880042110.01.T01:exon:1648;Parent=MsG0880042110.01.T01
Chr8 CDS 3820515 3821573 3820515 ID=MsG0880042110.01.T01:cds;Parent=MsG0880042110.01.T01
Gene Sequence

>MsG0880042110.01.T01

ATGGAGATATCATTGGCTTCAGCGACCGTAAAGGTTAGCAATCACATATATGATGATGTTGCCTTCTTCATTCTGTCTAAATTACCTCTCAAATCTTTGTTTCGATTTTGTTGTGTGCGCAAATCATGGTCTCTCTTATTTGAAAACCCTTATTTCATGGACATGTTTCGAATAAATTTCTTATCTAAGAATCATTCTTATTACAATGATACATCTCTCCTCTTGCATGATGAATACGAGTTGTATTCTCTTTTCGGGGAGAGGTTCGAGAATAGGGTCAAATTAGACTGGCCAAATCCGTATGAAGAGCAATTTGATTTTAATATTTATGGTTGTGCTAGTGTTAATGGTATTCTTTGTATTGAAGACGCTGGGAGAATTGGGGGCATTCATTGCATTGAAGAACTAGGGAGAGTTGTATTGTGGAATCCAACCACTGGTGAATTCAAAGTCACTCCTCCTAGTCCCTTTGCGTTTGAATCTCCATGTTGGGATCCCATGATTGATCTTCATGGATTTGGTTATCACCAAGTTAGAGATGACTATAAGGTAATTCGCCATGTAATGTTTTTTCCTATGACCGACGCAGATTGGGAGGAGACATGGAAAGATGGATATCACTCTTCCTTGTGGGAGATATATTCTCTAAAAAGTAATTCTTGGAGAAAAGTTGATGTAGATATGCCTACACAATATAATAGTGGTGTGGGTGTTCAAGTGTACATGGATGGAGTGTGTCACTGGTGGAGTGAAAGTGATGAAGTTTATTTGGTGTCATTTGAATTGATCAATGAGGTCTTTGTGAAAACACCCATACCTTCAAATATGGATGATAATGATATTGATTCTAGAATATTGTTTAGACACTTAAACGTGTTAAATGGATCAATTGTATGGATTTCAAATTATGCAGAGACCGGTACTTTCCACATATCAATTTTAGGTGAAGTTGGGGTCAAAGAGTCATGGACCAAACTCTTTATTGTAGGTCCTTTGCCTGACATTGAGTATCCTATTGGAATTGGCAAGAGGGCGATATATTCTTCAGAAAAAAAATAA

Protein sequence

>MsG0880042110.01.T01

MEISLASATVKVSNHIYDDVAFFILSKLPLKSLFRFCCVRKSWSLLFENPYFMDMFRINFLSKNHSYYNDTSLLLHDEYELYSLFGERFENRVKLDWPNPYEEQFDFNIYGCASVNGILCIEDAGRIGGIHCIEELGRVVLWNPTTGEFKVTPPSPFAFESPCWDPMIDLHGFGYHQVRDDYKVIRHVMFFPMTDADWEETWKDGYHSSLWEIYSLKSNSWRKVDVDMPTQYNSGVGVQVYMDGVCHWWSESDEVYLVSFELINEVFVKTPIPSNMDDNDIDSRILFRHLNVLNGSIVWISNYAETGTFHISILGEVGVKESWTKLFIVGPLPDIEYPIGIGKRAIYSSEKK*