Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035081.01.T01 | GAU43998.1 | 64.444 | 405 | 131 | 6 | 1 | 398 | 1 | 399 | 0 | 521 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035081.01.T01 | Q9LU24 | 25.237 | 317 | 181 | 12 | 15 | 326 | 1 | 266 | 7.47E-14 | 75.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035081.01.T01 | A0A2Z6NHK8 | 64.444 | 405 | 131 | 6 | 1 | 398 | 1 | 399 | 0.0 | 521 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035081.01.T01 | MTR_0129s0070 | 52.488 | 402 | 172 | 13 | 4 | 393 | 2 | 396 | 3.78e-128 | 375 |
MsG0680035081.01.T01 | MTR_0129s0120 | 50.877 | 399 | 181 | 11 | 4 | 392 | 2 | 395 | 1.48e-123 | 363 |
MsG0680035081.01.T01 | MTR_4g117550 | 46.985 | 398 | 175 | 10 | 5 | 393 | 3 | 373 | 2.06e-106 | 318 |
MsG0680035081.01.T01 | MTR_8g063440 | 47.545 | 387 | 188 | 12 | 14 | 394 | 7 | 384 | 8.57e-105 | 315 |
MsG0680035081.01.T01 | MTR_5g097330 | 44.169 | 403 | 200 | 10 | 11 | 394 | 8 | 404 | 2.57e-104 | 314 |
MsG0680035081.01.T01 | MTR_0129s0050 | 46.919 | 422 | 181 | 14 | 1 | 393 | 1 | 408 | 6.76e-104 | 313 |
MsG0680035081.01.T01 | MTR_1g007450 | 46.457 | 381 | 183 | 9 | 11 | 376 | 4 | 378 | 8.78e-99 | 301 |
MsG0680035081.01.T01 | MTR_4g102410 | 43.873 | 408 | 190 | 12 | 11 | 391 | 53 | 448 | 2.21e-97 | 298 |
MsG0680035081.01.T01 | MTR_2g022000 | 45.387 | 401 | 178 | 14 | 5 | 372 | 3 | 395 | 2.35e-97 | 298 |
MsG0680035081.01.T01 | MTR_6g086825 | 46.115 | 399 | 187 | 11 | 16 | 392 | 67 | 459 | 7.59e-97 | 297 |
MsG0680035081.01.T01 | MTR_2g021800 | 43.062 | 418 | 203 | 12 | 5 | 392 | 3 | 415 | 2.16e-96 | 294 |
MsG0680035081.01.T01 | MTR_2g066200 | 43.250 | 400 | 197 | 10 | 11 | 394 | 4 | 389 | 4.65e-96 | 293 |
MsG0680035081.01.T01 | MTR_0054s0100 | 45.146 | 412 | 198 | 12 | 5 | 394 | 4 | 409 | 1.77e-95 | 292 |
MsG0680035081.01.T01 | MTR_6g090180 | 45.185 | 405 | 187 | 15 | 11 | 389 | 39 | 434 | 3.42e-95 | 292 |
MsG0680035081.01.T01 | MTR_2g038680 | 42.686 | 417 | 190 | 14 | 11 | 392 | 8 | 410 | 4.67e-95 | 291 |
MsG0680035081.01.T01 | MTR_4g028510 | 45.025 | 402 | 190 | 15 | 13 | 392 | 9 | 401 | 5.63e-95 | 292 |
MsG0680035081.01.T01 | MTR_0054s0090 | 44.903 | 412 | 198 | 12 | 5 | 394 | 3 | 407 | 7.16e-95 | 290 |
MsG0680035081.01.T01 | MTR_2g066170 | 43.939 | 396 | 198 | 11 | 11 | 394 | 4 | 387 | 1.22e-94 | 289 |
MsG0680035081.01.T01 | MTR_2g104340 | 45.854 | 410 | 174 | 15 | 11 | 392 | 6 | 395 | 3.53e-94 | 288 |
MsG0680035081.01.T01 | MTR_6g079770 | 42.995 | 414 | 202 | 9 | 11 | 394 | 9 | 418 | 5.04e-94 | 288 |
MsG0680035081.01.T01 | MTR_6g080680 | 43.552 | 411 | 186 | 12 | 1 | 387 | 1 | 389 | 8.41e-94 | 287 |
MsG0680035081.01.T01 | MTR_6g079810 | 43.675 | 419 | 197 | 11 | 1 | 391 | 54 | 461 | 3.60e-93 | 288 |
MsG0680035081.01.T01 | MTR_8g012090 | 45.580 | 362 | 145 | 10 | 14 | 362 | 11 | 333 | 6.19e-93 | 283 |
MsG0680035081.01.T01 | MTR_3g011120 | 45.405 | 370 | 182 | 10 | 9 | 372 | 3 | 358 | 4.66e-92 | 281 |
MsG0680035081.01.T01 | MTR_0134s0060 | 44.578 | 415 | 190 | 13 | 11 | 392 | 4 | 411 | 8.72e-92 | 282 |
MsG0680035081.01.T01 | MTR_8g467670 | 43.544 | 395 | 201 | 12 | 8 | 395 | 2 | 381 | 1.58e-91 | 281 |
MsG0680035081.01.T01 | MTR_7g069550 | 46.032 | 378 | 169 | 17 | 13 | 367 | 8 | 373 | 1.95e-91 | 281 |
MsG0680035081.01.T01 | MTR_4g130330 | 42.250 | 400 | 197 | 11 | 16 | 393 | 4 | 391 | 2.94e-91 | 280 |
MsG0680035081.01.T01 | MTR_5g097220 | 45.220 | 387 | 168 | 15 | 12 | 367 | 6 | 379 | 3.17e-90 | 278 |
MsG0680035081.01.T01 | MTR_2g021950 | 42.195 | 410 | 199 | 14 | 1 | 389 | 1 | 393 | 2.92e-89 | 275 |
MsG0680035081.01.T01 | MTR_8g039500 | 44.475 | 362 | 171 | 10 | 11 | 362 | 4 | 345 | 3.35e-89 | 273 |
MsG0680035081.01.T01 | MTR_8g041270 | 42.579 | 411 | 191 | 14 | 13 | 392 | 9 | 405 | 5.50e-89 | 275 |
MsG0680035081.01.T01 | MTR_5g097350 | 44.557 | 395 | 178 | 17 | 14 | 389 | 11 | 383 | 1.04e-88 | 274 |
MsG0680035081.01.T01 | MTR_8g464770 | 44.531 | 384 | 187 | 14 | 14 | 387 | 7 | 374 | 1.08e-88 | 273 |
MsG0680035081.01.T01 | MTR_5g096630 | 41.278 | 407 | 211 | 13 | 13 | 394 | 12 | 415 | 1.55e-88 | 274 |
MsG0680035081.01.T01 | MTR_4g028660 | 42.469 | 405 | 204 | 13 | 4 | 389 | 1 | 395 | 7.28e-88 | 272 |
MsG0680035081.01.T01 | MTR_4g027450 | 42.469 | 405 | 204 | 13 | 4 | 389 | 1 | 395 | 7.28e-88 | 272 |
MsG0680035081.01.T01 | MTR_6g461660 | 43.797 | 395 | 197 | 12 | 11 | 389 | 11 | 396 | 1.21e-87 | 271 |
MsG0680035081.01.T01 | MTR_2g104280 | 41.849 | 411 | 194 | 11 | 14 | 393 | 9 | 405 | 2.09e-87 | 271 |
MsG0680035081.01.T01 | MTR_7g017040 | 42.439 | 410 | 194 | 15 | 9 | 393 | 6 | 398 | 2.37e-87 | 271 |
MsG0680035081.01.T01 | MTR_4g028680 | 42.615 | 413 | 203 | 16 | 4 | 394 | 1 | 401 | 3.22e-87 | 270 |
MsG0680035081.01.T01 | MTR_7g017130 | 42.543 | 409 | 205 | 15 | 1 | 392 | 1 | 396 | 9.98e-87 | 269 |
MsG0680035081.01.T01 | MTR_4g055820 | 45.152 | 361 | 166 | 12 | 13 | 350 | 8 | 359 | 1.01e-86 | 268 |
MsG0680035081.01.T01 | MTR_5g069390 | 40.976 | 410 | 199 | 14 | 12 | 391 | 19 | 415 | 2.57e-85 | 268 |
MsG0680035081.01.T01 | MTR_7g017170 | 41.568 | 421 | 204 | 15 | 1 | 392 | 1 | 408 | 3.92e-85 | 265 |
MsG0680035081.01.T01 | MTR_2g021770 | 40.723 | 415 | 210 | 14 | 8 | 394 | 2 | 408 | 1.02e-84 | 264 |
MsG0680035081.01.T01 | MTR_4g014370 | 39.618 | 419 | 201 | 14 | 12 | 392 | 4 | 408 | 2.81e-84 | 263 |
MsG0680035081.01.T01 | MTR_0831s0010 | 42.347 | 392 | 195 | 14 | 16 | 393 | 47 | 421 | 2.82e-84 | 263 |
MsG0680035081.01.T01 | MTR_8g046310 | 42.893 | 394 | 184 | 15 | 11 | 388 | 5 | 373 | 3.63e-84 | 262 |
MsG0680035081.01.T01 | MTR_2g065860 | 40.704 | 398 | 206 | 13 | 13 | 394 | 6 | 389 | 7.66e-84 | 261 |
MsG0680035081.01.T01 | MTR_5g097680 | 41.667 | 420 | 201 | 14 | 13 | 392 | 11 | 426 | 8.62e-84 | 262 |
MsG0680035081.01.T01 | MTR_5g059430 | 40.094 | 424 | 192 | 15 | 12 | 391 | 19 | 424 | 2.00e-83 | 261 |
MsG0680035081.01.T01 | MTR_2g034700 | 45.699 | 372 | 166 | 13 | 9 | 368 | 3 | 350 | 3.53e-83 | 259 |
MsG0680035081.01.T01 | MTR_5g091140 | 45.067 | 375 | 163 | 14 | 11 | 367 | 40 | 389 | 6.52e-83 | 260 |
MsG0680035081.01.T01 | MTR_1g007430 | 47.368 | 323 | 155 | 9 | 30 | 347 | 7 | 319 | 1.76e-81 | 253 |
MsG0680035081.01.T01 | MTR_1g007410 | 43.570 | 381 | 170 | 14 | 14 | 367 | 17 | 379 | 2.70e-81 | 255 |
MsG0680035081.01.T01 | MTR_7g079640 | 42.204 | 372 | 171 | 13 | 18 | 373 | 12 | 355 | 4.26e-81 | 254 |
MsG0680035081.01.T01 | MTR_5g096910 | 41.147 | 401 | 200 | 11 | 11 | 392 | 9 | 392 | 3.00e-80 | 252 |
MsG0680035081.01.T01 | MTR_2g066150 | 40.806 | 397 | 183 | 14 | 11 | 394 | 4 | 361 | 4.82e-80 | 251 |
MsG0680035081.01.T01 | MTR_5g072060 | 43.666 | 371 | 160 | 13 | 17 | 367 | 4 | 345 | 1.69e-79 | 257 |
MsG0680035081.01.T01 | MTR_5g037680 | 41.750 | 400 | 185 | 16 | 14 | 387 | 3 | 380 | 1.92e-79 | 252 |
MsG0680035081.01.T01 | MTR_2g064950 | 42.821 | 397 | 187 | 17 | 11 | 384 | 2 | 381 | 1.47e-78 | 248 |
MsG0680035081.01.T01 | MTR_8g033140 | 39.858 | 424 | 198 | 15 | 13 | 394 | 11 | 419 | 1.43e-77 | 246 |
MsG0680035081.01.T01 | MTR_8g064890 | 41.117 | 394 | 207 | 11 | 13 | 394 | 9 | 389 | 1.56e-77 | 245 |
MsG0680035081.01.T01 | MTR_8g046220 | 39.529 | 425 | 188 | 16 | 8 | 388 | 2 | 401 | 5.19e-77 | 244 |
MsG0680035081.01.T01 | MTR_6g478230 | 40.194 | 413 | 193 | 14 | 12 | 394 | 20 | 408 | 4.19e-76 | 242 |
MsG0680035081.01.T01 | MTR_8g013000 | 42.577 | 357 | 179 | 14 | 11 | 349 | 2 | 350 | 8.44e-76 | 241 |
MsG0680035081.01.T01 | MTR_2g065840 | 39.109 | 404 | 207 | 17 | 11 | 393 | 4 | 389 | 2.17e-75 | 239 |
MsG0680035081.01.T01 | MTR_8g046200 | 40.275 | 437 | 184 | 21 | 8 | 388 | 2 | 417 | 4.91e-75 | 239 |
MsG0680035081.01.T01 | MTR_4g028750 | 40.682 | 381 | 197 | 15 | 4 | 366 | 1 | 370 | 2.16e-74 | 237 |
MsG0680035081.01.T01 | MTR_7g111700 | 40.150 | 401 | 172 | 11 | 16 | 394 | 12 | 366 | 2.08e-73 | 234 |
MsG0680035081.01.T01 | MTR_5g024260 | 40.238 | 420 | 201 | 18 | 1 | 384 | 1 | 406 | 8.11e-73 | 233 |
MsG0680035081.01.T01 | MTR_1g053510 | 40.441 | 408 | 201 | 15 | 11 | 388 | 6 | 401 | 2.24e-72 | 232 |
MsG0680035081.01.T01 | MTR_8g032980 | 39.130 | 437 | 193 | 18 | 7 | 390 | 2 | 418 | 2.06e-71 | 230 |
MsG0680035081.01.T01 | MTR_8g036970 | 40.510 | 353 | 138 | 10 | 25 | 366 | 4 | 295 | 4.52e-71 | 228 |
MsG0680035081.01.T01 | MTR_1g050308 | 37.905 | 401 | 174 | 11 | 1 | 394 | 16 | 348 | 6.98e-71 | 226 |
MsG0680035081.01.T01 | MTR_5g092850 | 39.259 | 405 | 192 | 18 | 18 | 389 | 15 | 398 | 1.23e-70 | 228 |
MsG0680035081.01.T01 | MTR_5g074850 | 40.000 | 400 | 182 | 16 | 3 | 366 | 19 | 396 | 3.73e-68 | 232 |
MsG0680035081.01.T01 | MTR_8g063330 | 41.573 | 356 | 182 | 15 | 13 | 352 | 6 | 351 | 8.45e-68 | 222 |
MsG0680035081.01.T01 | MTR_5g074800 | 42.697 | 356 | 166 | 17 | 58 | 392 | 1 | 339 | 1.29e-67 | 218 |
MsG0680035081.01.T01 | MTR_8g033090 | 38.571 | 420 | 196 | 18 | 16 | 392 | 11 | 411 | 6.52e-67 | 218 |
MsG0680035081.01.T01 | MTR_8g064790 | 36.761 | 389 | 180 | 9 | 13 | 394 | 9 | 338 | 1.78e-65 | 212 |
MsG0680035081.01.T01 | MTR_6g090250 | 39.440 | 393 | 191 | 13 | 39 | 388 | 31 | 419 | 1.65e-64 | 212 |
MsG0680035081.01.T01 | MTR_1g098180 | 37.284 | 405 | 189 | 15 | 6 | 390 | 4 | 363 | 3.03e-64 | 210 |
MsG0680035081.01.T01 | MTR_7g016930 | 43.385 | 325 | 142 | 13 | 13 | 325 | 10 | 304 | 5.08e-64 | 208 |
MsG0680035081.01.T01 | MTR_8g018110 | 38.537 | 410 | 206 | 14 | 11 | 392 | 5 | 396 | 1.07e-63 | 209 |
MsG0680035081.01.T01 | MTR_5g092860 | 40.274 | 365 | 156 | 14 | 38 | 373 | 21 | 352 | 7.17e-63 | 206 |
MsG0680035081.01.T01 | MTR_5g022850 | 36.842 | 399 | 179 | 14 | 14 | 394 | 11 | 354 | 7.84e-63 | 206 |
MsG0680035081.01.T01 | MTR_6g078010 | 40.341 | 352 | 169 | 12 | 56 | 388 | 1 | 330 | 2.47e-62 | 204 |
MsG0680035081.01.T01 | MTR_5g096900 | 42.988 | 328 | 142 | 12 | 14 | 317 | 7 | 313 | 2.61e-62 | 203 |
MsG0680035081.01.T01 | MTR_8g033110 | 37.915 | 422 | 210 | 18 | 11 | 392 | 5 | 414 | 3.10e-62 | 206 |
MsG0680035081.01.T01 | MTR_5g075370 | 38.325 | 394 | 192 | 16 | 16 | 375 | 5 | 381 | 8.45e-61 | 210 |
MsG0680035081.01.T01 | MTR_4g014370 | 36.387 | 393 | 167 | 15 | 12 | 392 | 15 | 336 | 7.78e-60 | 197 |
MsG0680035081.01.T01 | MTR_5g064700 | 37.867 | 375 | 187 | 14 | 58 | 393 | 1 | 368 | 8.61e-59 | 196 |
MsG0680035081.01.T01 | MTR_8g063370 | 38.005 | 371 | 198 | 11 | 7 | 367 | 16 | 364 | 2.18e-58 | 196 |
MsG0680035081.01.T01 | MTR_4g007940 | 39.871 | 311 | 158 | 11 | 87 | 376 | 24 | 326 | 2.50e-57 | 191 |
MsG0680035081.01.T01 | MTR_6g079790 | 39.812 | 319 | 155 | 9 | 103 | 394 | 2 | 310 | 5.42e-57 | 189 |
MsG0680035081.01.T01 | MTR_5g086590 | 45.259 | 232 | 111 | 7 | 138 | 366 | 13 | 231 | 4.58e-56 | 184 |
MsG0680035081.01.T01 | MTR_2g021920 | 44.770 | 239 | 105 | 8 | 172 | 389 | 37 | 269 | 1.57e-55 | 184 |
MsG0680035081.01.T01 | MTR_5g076490 | 39.344 | 366 | 164 | 14 | 56 | 393 | 1 | 336 | 5.83e-54 | 182 |
MsG0680035081.01.T01 | MTR_6g070880 | 41.949 | 236 | 120 | 6 | 14 | 234 | 27 | 260 | 6.06e-53 | 177 |
MsG0680035081.01.T01 | MTR_6g071420 | 41.949 | 236 | 120 | 6 | 14 | 234 | 27 | 260 | 6.06e-53 | 177 |
MsG0680035081.01.T01 | MTR_7g104710 | 39.228 | 311 | 139 | 8 | 11 | 306 | 9 | 284 | 7.36e-53 | 179 |
MsG0680035081.01.T01 | MTR_6g087620 | 38.699 | 292 | 131 | 8 | 91 | 366 | 1 | 260 | 6.42e-51 | 172 |
MsG0680035081.01.T01 | MTR_5g068490 | 39.404 | 302 | 145 | 13 | 100 | 394 | 8 | 278 | 7.25e-51 | 172 |
MsG0680035081.01.T01 | MTR_8g063310 | 34.171 | 398 | 221 | 15 | 8 | 384 | 11 | 388 | 2.18e-50 | 175 |
MsG0680035081.01.T01 | MTR_1g050312 | 38.284 | 303 | 143 | 12 | 88 | 380 | 13 | 281 | 2.03e-48 | 166 |
MsG0680035081.01.T01 | MTR_8g033000 | 34.383 | 381 | 189 | 14 | 56 | 393 | 1 | 363 | 3.29e-48 | 168 |
MsG0680035081.01.T01 | MTR_8g063350 | 34.218 | 377 | 172 | 11 | 7 | 367 | 2 | 318 | 1.07e-47 | 166 |
MsG0680035081.01.T01 | MTR_6g004450 | 40.234 | 256 | 132 | 7 | 150 | 395 | 27 | 271 | 1.44e-47 | 164 |
MsG0680035081.01.T01 | MTR_7g023800 | 34.294 | 347 | 167 | 10 | 58 | 386 | 1 | 304 | 2.83e-47 | 164 |
MsG0680035081.01.T01 | MTR_1g076810 | 42.063 | 252 | 127 | 10 | 1 | 244 | 1 | 241 | 8.06e-47 | 170 |
MsG0680035081.01.T01 | MTR_5g043605 | 33.005 | 406 | 182 | 14 | 2 | 392 | 8 | 338 | 1.49e-46 | 164 |
MsG0680035081.01.T01 | MTR_5g097820 | 40.154 | 259 | 129 | 9 | 4 | 249 | 8 | 253 | 2.67e-45 | 157 |
MsG0680035081.01.T01 | MTR_5g097850 | 48.148 | 189 | 81 | 5 | 218 | 394 | 63 | 246 | 3.43e-45 | 157 |
MsG0680035081.01.T01 | MTR_5g094350 | 39.568 | 278 | 136 | 10 | 15 | 274 | 9 | 272 | 6.88e-45 | 157 |
MsG0680035081.01.T01 | MTR_5g098950 | 43.721 | 215 | 83 | 5 | 140 | 349 | 90 | 271 | 4.19e-44 | 154 |
MsG0680035081.01.T01 | MTR_8g073570 | 48.276 | 174 | 82 | 6 | 11 | 182 | 2 | 169 | 2.39e-43 | 149 |
MsG0680035081.01.T01 | MTR_4g016000 | 45.366 | 205 | 93 | 8 | 143 | 344 | 2 | 190 | 4.35e-43 | 150 |
MsG0680035081.01.T01 | MTR_5g023970 | 43.284 | 201 | 102 | 7 | 201 | 394 | 2 | 197 | 4.37e-43 | 149 |
MsG0680035081.01.T01 | MTR_6g465360 | 41.004 | 239 | 114 | 8 | 5 | 221 | 48 | 281 | 2.54e-42 | 150 |
MsG0680035081.01.T01 | MTR_2g104260 | 39.130 | 276 | 139 | 10 | 13 | 267 | 8 | 275 | 7.29e-42 | 149 |
MsG0680035081.01.T01 | MTR_6g090260 | 45.604 | 182 | 87 | 4 | 193 | 367 | 59 | 235 | 1.14e-41 | 148 |
MsG0680035081.01.T01 | MTR_6g090260 | 57.971 | 69 | 28 | 1 | 1 | 68 | 1 | 69 | 7.16e-15 | 74.7 |
MsG0680035081.01.T01 | MTR_7g019250 | 43.636 | 220 | 106 | 6 | 152 | 368 | 206 | 410 | 9.17e-41 | 150 |
MsG0680035081.01.T01 | MTR_8g035690 | 40.149 | 269 | 116 | 12 | 161 | 392 | 42 | 302 | 3.12e-40 | 145 |
MsG0680035081.01.T01 | MTR_6g009350 | 42.211 | 199 | 91 | 6 | 172 | 357 | 8 | 195 | 3.51e-39 | 139 |
MsG0680035081.01.T01 | MTR_5g037190 | 35.821 | 268 | 128 | 10 | 13 | 263 | 10 | 250 | 4.89e-38 | 138 |
MsG0680035081.01.T01 | MTR_3g018750 | 38.618 | 246 | 120 | 9 | 171 | 392 | 2 | 240 | 8.19e-37 | 134 |
MsG0680035081.01.T01 | MTR_1g115205 | 37.600 | 250 | 110 | 8 | 12 | 250 | 22 | 236 | 8.78e-34 | 127 |
MsG0680035081.01.T01 | MTR_5g066420 | 48.485 | 132 | 65 | 3 | 253 | 382 | 19 | 149 | 8.44e-33 | 120 |
MsG0680035081.01.T01 | MTR_5g096920 | 44.737 | 152 | 77 | 5 | 244 | 391 | 2 | 150 | 8.95e-30 | 113 |
MsG0680035081.01.T01 | MTR_7g101200 | 36.123 | 227 | 100 | 11 | 136 | 351 | 36 | 228 | 6.22e-29 | 113 |
MsG0680035081.01.T01 | MTR_3g030620 | 42.593 | 162 | 80 | 6 | 241 | 391 | 21 | 180 | 1.16e-27 | 108 |
MsG0680035081.01.T01 | MTR_6g079730 | 46.667 | 135 | 68 | 3 | 256 | 388 | 13 | 145 | 1.40e-27 | 107 |
MsG0680035081.01.T01 | MTR_5g096070 | 42.529 | 174 | 62 | 6 | 12 | 180 | 19 | 159 | 2.16e-27 | 107 |
MsG0680035081.01.T01 | MTR_7g017150 | 39.487 | 195 | 103 | 8 | 208 | 392 | 77 | 266 | 5.33e-26 | 106 |
MsG0680035081.01.T01 | MTR_5g097540 | 43.885 | 139 | 71 | 4 | 213 | 349 | 97 | 230 | 8.88e-26 | 106 |
MsG0680035081.01.T01 | MTR_7g017120 | 40.000 | 195 | 102 | 9 | 208 | 392 | 76 | 265 | 1.46e-25 | 104 |
MsG0680035081.01.T01 | MTR_5g097660 | 50.000 | 114 | 54 | 3 | 278 | 389 | 4 | 116 | 2.06e-25 | 100 |
MsG0680035081.01.T01 | MTR_3g019290 | 36.893 | 206 | 90 | 7 | 16 | 219 | 11 | 178 | 7.17e-25 | 100 |
MsG0680035081.01.T01 | MTR_5g091150 | 33.784 | 222 | 83 | 9 | 103 | 299 | 2 | 184 | 2.75e-24 | 99.8 |
MsG0680035081.01.T01 | MTR_5g097650 | 41.509 | 159 | 69 | 7 | 11 | 161 | 13 | 155 | 4.52e-24 | 97.8 |
MsG0680035081.01.T01 | MTR_4g021785 | 27.363 | 402 | 205 | 18 | 18 | 391 | 8 | 350 | 2.85e-23 | 100 |
MsG0680035081.01.T01 | MTR_2g022020 | 41.525 | 118 | 67 | 2 | 272 | 389 | 1 | 116 | 8.52e-23 | 92.8 |
MsG0680035081.01.T01 | MTR_5g036250 | 56.098 | 82 | 36 | 0 | 303 | 384 | 21 | 102 | 1.11e-22 | 94.7 |
MsG0680035081.01.T01 | MTR_4g023090 | 26.961 | 408 | 231 | 18 | 13 | 391 | 10 | 379 | 1.82e-22 | 98.6 |
MsG0680035081.01.T01 | MTR_5g086780 | 46.296 | 108 | 54 | 2 | 259 | 366 | 121 | 224 | 2.61e-22 | 95.1 |
MsG0680035081.01.T01 | MTR_5g086780 | 55.696 | 79 | 30 | 2 | 5 | 83 | 3 | 76 | 2.80e-14 | 72.4 |
MsG0680035081.01.T01 | MTR_1g047080 | 29.630 | 351 | 164 | 16 | 56 | 392 | 1 | 282 | 3.57e-22 | 95.9 |
MsG0680035081.01.T01 | MTR_2g021150 | 27.809 | 356 | 210 | 17 | 19 | 361 | 14 | 335 | 1.02e-21 | 96.3 |
MsG0680035081.01.T01 | MTR_3g034160 | 28.325 | 406 | 226 | 19 | 13 | 391 | 3 | 370 | 1.02e-21 | 96.3 |
MsG0680035081.01.T01 | MTR_2g028130 | 25.000 | 356 | 204 | 11 | 15 | 339 | 1 | 324 | 1.17e-21 | 96.3 |
MsG0680035081.01.T01 | MTR_5g096050 | 44.037 | 109 | 45 | 2 | 244 | 337 | 2 | 109 | 2.32e-21 | 89.4 |
MsG0680035081.01.T01 | MTR_4g023080 | 27.089 | 395 | 224 | 17 | 13 | 391 | 3 | 349 | 2.42e-21 | 94.7 |
MsG0680035081.01.T01 | MTR_2g028140 | 25.146 | 342 | 208 | 13 | 15 | 329 | 1 | 321 | 1.48e-20 | 93.2 |
MsG0680035081.01.T01 | MTR_4g116330 | 25.377 | 398 | 239 | 16 | 13 | 391 | 17 | 375 | 1.61e-20 | 92.8 |
MsG0680035081.01.T01 | MTR_3g047580 | 38.255 | 149 | 63 | 5 | 9 | 152 | 3 | 127 | 2.21e-20 | 86.7 |
MsG0680035081.01.T01 | MTR_4g094365 | 27.882 | 373 | 201 | 20 | 18 | 367 | 7 | 334 | 2.81e-20 | 91.7 |
MsG0680035081.01.T01 | MTR_3g034180 | 27.654 | 405 | 230 | 20 | 13 | 391 | 117 | 484 | 5.04e-20 | 92.0 |
MsG0680035081.01.T01 | MTR_2g031720 | 24.462 | 372 | 224 | 16 | 19 | 367 | 6 | 343 | 9.11e-20 | 90.9 |
MsG0680035081.01.T01 | MTR_0129s0110 | 57.143 | 77 | 16 | 1 | 77 | 153 | 1 | 60 | 1.49e-19 | 84.0 |
MsG0680035081.01.T01 | MTR_0667s0010 | 25.153 | 326 | 212 | 11 | 15 | 329 | 2 | 306 | 1.66e-19 | 90.1 |
MsG0680035081.01.T01 | MTR_3g034130 | 27.089 | 395 | 231 | 19 | 14 | 385 | 4 | 364 | 2.62e-19 | 89.0 |
MsG0680035081.01.T01 | MTR_2g028110 | 23.770 | 366 | 230 | 16 | 19 | 367 | 4 | 337 | 3.43e-19 | 89.0 |
MsG0680035081.01.T01 | MTR_4g023070 | 26.617 | 402 | 227 | 19 | 19 | 391 | 3 | 365 | 1.01e-18 | 87.4 |
MsG0680035081.01.T01 | MTR_1g094210 | 25.617 | 324 | 180 | 15 | 19 | 329 | 57 | 332 | 1.56e-18 | 87.0 |
MsG0680035081.01.T01 | MTR_1g094210 | 25.617 | 324 | 180 | 15 | 19 | 329 | 57 | 332 | 2.43e-18 | 86.7 |
MsG0680035081.01.T01 | MTR_8g041440 | 44.144 | 111 | 37 | 3 | 11 | 114 | 7 | 99 | 4.05e-18 | 80.1 |
MsG0680035081.01.T01 | MTR_4g023120 | 26.617 | 402 | 227 | 19 | 19 | 391 | 3 | 365 | 9.30e-18 | 84.3 |
MsG0680035081.01.T01 | MTR_0115s0020 | 24.599 | 374 | 219 | 13 | 18 | 357 | 9 | 353 | 3.89e-17 | 82.8 |
MsG0680035081.01.T01 | MTR_4g023150 | 26.683 | 401 | 223 | 20 | 13 | 391 | 4 | 355 | 5.89e-17 | 82.0 |
MsG0680035081.01.T01 | MTR_3g014540 | 24.789 | 355 | 227 | 14 | 19 | 366 | 29 | 350 | 8.15e-17 | 81.6 |
MsG0680035081.01.T01 | MTR_1g054725 | 24.611 | 321 | 206 | 11 | 17 | 329 | 18 | 310 | 1.03e-16 | 81.6 |
MsG0680035081.01.T01 | MTR_2g028160 | 23.580 | 352 | 197 | 13 | 15 | 329 | 1 | 317 | 1.30e-16 | 81.6 |
MsG0680035081.01.T01 | MTR_1g055135 | 26.382 | 398 | 222 | 16 | 18 | 387 | 12 | 366 | 1.32e-16 | 81.3 |
MsG0680035081.01.T01 | MTR_2g025420 | 25.641 | 351 | 206 | 14 | 19 | 339 | 6 | 331 | 1.52e-16 | 81.3 |
MsG0680035081.01.T01 | MTR_1g050305 | 54.118 | 85 | 33 | 3 | 296 | 375 | 23 | 106 | 3.18e-16 | 75.5 |
MsG0680035081.01.T01 | MTR_4g070550 | 23.977 | 342 | 206 | 13 | 15 | 329 | 1 | 315 | 6.21e-16 | 79.3 |
MsG0680035081.01.T01 | MTR_2g024110 | 25.309 | 324 | 191 | 15 | 19 | 327 | 4 | 291 | 6.29e-16 | 79.0 |
MsG0680035081.01.T01 | MTR_2g021155 | 25.915 | 355 | 221 | 13 | 22 | 369 | 39 | 358 | 9.04e-16 | 79.7 |
MsG0680035081.01.T01 | MTR_3g103020 | 25.990 | 404 | 220 | 21 | 18 | 391 | 19 | 373 | 9.13e-16 | 78.6 |
MsG0680035081.01.T01 | MTR_1g097560 | 24.000 | 400 | 233 | 16 | 9 | 388 | 26 | 374 | 1.33e-15 | 78.2 |
MsG0680035081.01.T01 | MTR_4g117780 | 26.230 | 366 | 218 | 13 | 19 | 369 | 11 | 339 | 1.97e-15 | 77.4 |
MsG0680035081.01.T01 | MTR_3g013770 | 26.284 | 331 | 184 | 14 | 19 | 329 | 33 | 323 | 2.02e-15 | 77.8 |
MsG0680035081.01.T01 | MTR_4g094400 | 41.905 | 105 | 42 | 3 | 241 | 327 | 8 | 111 | 3.15e-15 | 72.4 |
MsG0680035081.01.T01 | MTR_5g048160 | 25.128 | 390 | 234 | 16 | 18 | 373 | 3 | 368 | 4.57e-15 | 76.6 |
MsG0680035081.01.T01 | MTR_2g078900 | 25.786 | 318 | 192 | 11 | 19 | 329 | 33 | 313 | 4.65e-15 | 76.3 |
MsG0680035081.01.T01 | MTR_3g010590 | 24.841 | 314 | 191 | 12 | 19 | 329 | 39 | 310 | 5.21e-15 | 76.3 |
MsG0680035081.01.T01 | MTR_1g009110 | 25.852 | 352 | 197 | 19 | 8 | 332 | 2 | 316 | 5.53e-15 | 76.3 |
MsG0680035081.01.T01 | MTR_4g117770 | 28.150 | 373 | 204 | 20 | 18 | 369 | 10 | 339 | 7.91e-15 | 75.9 |
MsG0680035081.01.T01 | MTR_4g117810 | 28.150 | 373 | 204 | 20 | 18 | 369 | 10 | 339 | 7.91e-15 | 75.9 |
MsG0680035081.01.T01 | MTR_3g036335 | 22.563 | 359 | 222 | 14 | 19 | 364 | 41 | 356 | 8.11e-15 | 75.9 |
MsG0680035081.01.T01 | MTR_1g068875 | 22.102 | 371 | 235 | 15 | 19 | 372 | 4 | 337 | 1.47e-14 | 75.1 |
MsG0680035081.01.T01 | MTR_2g426020 | 22.796 | 329 | 217 | 9 | 15 | 329 | 2 | 307 | 1.69e-14 | 75.1 |
MsG0680035081.01.T01 | MTR_2g426090 | 25.231 | 325 | 193 | 13 | 27 | 329 | 14 | 310 | 1.76e-14 | 75.1 |
MsG0680035081.01.T01 | MTR_4g109280 | 28.533 | 368 | 208 | 16 | 17 | 370 | 6 | 332 | 1.88e-14 | 74.7 |
MsG0680035081.01.T01 | MTR_3g013740 | 26.136 | 352 | 192 | 17 | 6 | 329 | 31 | 342 | 2.38e-14 | 74.7 |
MsG0680035081.01.T01 | MTR_0064s0160 | 24.181 | 397 | 262 | 13 | 18 | 390 | 41 | 422 | 2.60e-14 | 74.7 |
MsG0680035081.01.T01 | MTR_3g009310 | 25.994 | 327 | 186 | 19 | 19 | 330 | 42 | 327 | 2.68e-14 | 74.3 |
MsG0680035081.01.T01 | MTR_7g070440 | 26.720 | 378 | 208 | 19 | 19 | 364 | 7 | 347 | 3.44e-14 | 73.9 |
MsG0680035081.01.T01 | MTR_3g014570 | 23.824 | 319 | 205 | 11 | 19 | 330 | 29 | 316 | 4.97e-14 | 73.6 |
MsG0680035081.01.T01 | MTR_6g053260 | 24.928 | 345 | 197 | 17 | 5 | 329 | 322 | 624 | 1.05e-13 | 73.2 |
MsG0680035081.01.T01 | MTR_3g030250 | 24.561 | 342 | 210 | 11 | 19 | 357 | 37 | 333 | 1.15e-13 | 72.4 |
MsG0680035081.01.T01 | MTR_4g023200 | 25.984 | 381 | 211 | 20 | 33 | 391 | 24 | 355 | 1.72e-13 | 71.6 |
MsG0680035081.01.T01 | MTR_3g006670 | 24.852 | 338 | 212 | 12 | 1 | 329 | 32 | 336 | 2.09e-13 | 71.6 |
MsG0680035081.01.T01 | MTR_2g031680 | 23.262 | 374 | 225 | 17 | 15 | 366 | 2 | 335 | 2.38e-13 | 71.2 |
MsG0680035081.01.T01 | MTR_4g023130 | 26.950 | 282 | 153 | 13 | 128 | 391 | 62 | 308 | 3.26e-13 | 70.5 |
MsG0680035081.01.T01 | MTR_1g023400 | 23.706 | 367 | 225 | 15 | 22 | 371 | 6 | 334 | 4.53e-13 | 70.5 |
MsG0680035081.01.T01 | MTR_3g097190 | 55.556 | 54 | 24 | 0 | 314 | 367 | 28 | 81 | 6.38e-13 | 67.4 |
MsG0680035081.01.T01 | MTR_2g046920 | 25.298 | 336 | 181 | 16 | 19 | 333 | 24 | 310 | 6.61e-13 | 70.1 |
MsG0680035081.01.T01 | MTR_7g407070 | 24.695 | 328 | 208 | 12 | 19 | 329 | 32 | 337 | 7.10e-13 | 70.1 |
MsG0680035081.01.T01 | MTR_3g047540 | 46.154 | 65 | 33 | 1 | 211 | 273 | 4 | 68 | 7.94e-13 | 64.3 |
MsG0680035081.01.T01 | MTR_2g078850 | 26.019 | 319 | 187 | 15 | 22 | 329 | 33 | 313 | 1.24e-12 | 68.9 |
MsG0680035081.01.T01 | MTR_8g102520 | 28.352 | 261 | 151 | 10 | 141 | 387 | 75 | 313 | 2.71e-12 | 67.8 |
MsG0680035081.01.T01 | MTR_3g006530 | 23.743 | 358 | 214 | 17 | 19 | 359 | 40 | 355 | 2.86e-12 | 68.2 |
MsG0680035081.01.T01 | MTR_6g060650 | 27.676 | 383 | 224 | 18 | 13 | 374 | 2 | 352 | 3.54e-12 | 67.8 |
MsG0680035081.01.T01 | MTR_5g070088 | 24.337 | 415 | 241 | 16 | 14 | 391 | 2 | 380 | 3.59e-12 | 67.8 |
MsG0680035081.01.T01 | MTR_3g023930 | 24.484 | 339 | 205 | 12 | 19 | 357 | 34 | 321 | 4.34e-12 | 67.4 |
MsG0680035081.01.T01 | MTR_6g053240 | 24.224 | 322 | 204 | 13 | 19 | 329 | 28 | 320 | 4.69e-12 | 67.4 |
MsG0680035081.01.T01 | MTR_5g022420 | 24.251 | 367 | 219 | 16 | 11 | 366 | 19 | 337 | 5.35e-12 | 67.4 |
MsG0680035081.01.T01 | MTR_2g055970 | 24.650 | 357 | 213 | 17 | 11 | 354 | 203 | 516 | 7.73e-12 | 67.4 |
MsG0680035081.01.T01 | MTR_7g056710 | 23.274 | 391 | 183 | 17 | 18 | 355 | 22 | 348 | 7.81e-12 | 66.6 |
MsG0680035081.01.T01 | MTR_3g030240 | 23.718 | 312 | 194 | 12 | 19 | 329 | 40 | 308 | 8.40e-12 | 66.6 |
MsG0680035081.01.T01 | MTR_1g097490 | 22.775 | 382 | 257 | 14 | 11 | 387 | 41 | 389 | 9.44e-12 | 66.6 |
MsG0680035081.01.T01 | MTR_3g010430 | 22.699 | 326 | 194 | 11 | 19 | 327 | 36 | 320 | 1.21e-11 | 66.2 |
MsG0680035081.01.T01 | MTR_5g094360 | 41.860 | 86 | 46 | 3 | 148 | 231 | 40 | 123 | 1.42e-11 | 62.8 |
MsG0680035081.01.T01 | MTR_5g097730 | 51.923 | 52 | 25 | 0 | 303 | 354 | 2 | 53 | 1.86e-11 | 59.7 |
MsG0680035081.01.T01 | MTR_8g099460 | 23.867 | 331 | 198 | 14 | 19 | 329 | 5 | 301 | 3.50e-11 | 64.7 |
MsG0680035081.01.T01 | MTR_7g013590 | 24.586 | 362 | 221 | 15 | 22 | 369 | 39 | 362 | 3.52e-11 | 64.7 |
MsG0680035081.01.T01 | MTR_4g030090 | 23.743 | 358 | 192 | 12 | 20 | 339 | 15 | 329 | 3.77e-11 | 64.7 |
MsG0680035081.01.T01 | MTR_2g026010 | 25.656 | 343 | 176 | 17 | 18 | 329 | 3 | 297 | 4.93e-11 | 64.3 |
MsG0680035081.01.T01 | MTR_2g024100 | 25.559 | 313 | 192 | 11 | 33 | 328 | 21 | 309 | 5.78e-11 | 64.3 |
MsG0680035081.01.T01 | MTR_3g010520 | 22.438 | 361 | 226 | 11 | 1 | 357 | 3 | 313 | 5.82e-11 | 63.9 |
MsG0680035081.01.T01 | MTR_7g062060 | 23.837 | 344 | 208 | 11 | 19 | 330 | 12 | 333 | 6.29e-11 | 63.9 |
MsG0680035081.01.T01 | MTR_1g050542 | 23.978 | 367 | 207 | 16 | 19 | 366 | 58 | 371 | 6.51e-11 | 63.9 |
MsG0680035081.01.T01 | MTR_5g070080 | 25.122 | 410 | 245 | 20 | 18 | 397 | 9 | 386 | 6.65e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035081.01.T01 | AT3G16210 | 25.237 | 317 | 181 | 12 | 15 | 326 | 1 | 266 | 7.62e-15 | 75.9 |
MsG0680035081.01.T01 | AT3G06240 | 24.112 | 394 | 228 | 15 | 19 | 371 | 36 | 399 | 7.01e-14 | 73.2 |
MsG0680035081.01.T01 | AT3G10240 | 25.723 | 311 | 172 | 16 | 19 | 308 | 27 | 299 | 9.73e-12 | 66.6 |
MsG0680035081.01.T01 | AT2G16810 | 27.206 | 272 | 163 | 12 | 15 | 278 | 37 | 281 | 1.66e-11 | 65.1 |
MsG0680035081.01.T01 | AT4G12560 | 22.115 | 416 | 246 | 14 | 19 | 396 | 4 | 379 | 1.99e-11 | 65.9 |
MsG0680035081.01.T01 | AT4G12560 | 22.115 | 416 | 246 | 14 | 19 | 396 | 4 | 379 | 1.99e-11 | 65.9 |
MsG0680035081.01.T01 | AT4G12560 | 22.115 | 416 | 246 | 14 | 19 | 396 | 4 | 379 | 1.99e-11 | 65.9 |
MsG0680035081.01.T01 | AT4G19930 | 28.947 | 266 | 146 | 15 | 18 | 265 | 42 | 282 | 4.99e-11 | 64.7 |
MsG0680035081.01.T01 | AT2G40920 | 26.471 | 272 | 155 | 12 | 22 | 277 | 57 | 299 | 5.83e-11 | 64.3 |
Find 84 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATATGTGCATGATTATTT+TGG | 0.163226 | 6:-98596846 | MsG0680035081.01.T01:CDS |
TAATGAAGGTTTATATATAT+TGG | 0.225280 | 6:-98597327 | MsG0680035081.01.T01:CDS |
TAATACCGAAAATTACAATT+TGG | 0.246596 | 6:-98597262 | MsG0680035081.01.T01:CDS |
CGGTACATGTTCATGAAATA+AGG | 0.266070 | 6:+98597509 | None:intergenic |
TCACTTTCAAAATCAGTTAG+AGG | 0.294003 | 6:+98597086 | None:intergenic |
AAACCTTCATTATCTTGAAT+TGG | 0.325770 | 6:+98597338 | None:intergenic |
AGATCCTTGGACAGCTAAAA+AGG | 0.327524 | 6:-98597645 | MsG0680035081.01.T01:CDS |
GATTGTGTTGACTATCCTAT+TGG | 0.348014 | 6:-98596669 | MsG0680035081.01.T01:CDS |
TGGGGAGAAATTCGAGAATA+AGG | 0.350130 | 6:-98597381 | MsG0680035081.01.T01:CDS |
CCTATTGGAGGAGGGAATAA+AGG | 0.355501 | 6:-98596654 | MsG0680035081.01.T01:CDS |
AATCGAATCAAAGATTTAAG+AGG | 0.360839 | 6:+98597572 | None:intergenic |
GGCGGGGACTCGAGAGGACT+TGG | 0.372792 | 6:+98597206 | None:intergenic |
CCTTTATTCCCTCCTCCAAT+AGG | 0.374347 | 6:+98596654 | None:intergenic |
AAAATAATCATGCACATATG+AGG | 0.376826 | 6:+98596848 | None:intergenic |
ATCTGTCTCAAGTGAATCTA+AGG | 0.377272 | 6:+98597433 | None:intergenic |
CTACATGTTGAATTACCTTA+AGG | 0.396458 | 6:+98597120 | None:intergenic |
CCTACAGGCTATTATCCTTC+AGG | 0.397028 | 6:-98596975 | MsG0680035081.01.T01:CDS |
CCTTCATTATCTTGAATTGG+AGG | 0.401203 | 6:+98597341 | None:intergenic |
TGGACTAAACTCTTTGTTGT+TGG | 0.407257 | 6:-98596699 | MsG0680035081.01.T01:CDS |
AGAATAAGGTCAAATTAGAT+TGG | 0.411158 | 6:-98597367 | MsG0680035081.01.T01:CDS |
TATATCAAATGATGGAGAAC+TGG | 0.423083 | 6:-98596619 | MsG0680035081.01.T01:CDS |
TCATAAGGAAGTCCTTCTTC+CGG | 0.454682 | 6:-98596523 | MsG0680035081.01.T01:CDS |
GGTACATGTTCATGAAATAA+GGG | 0.455150 | 6:+98597510 | None:intergenic |
ATGGAGAATGTAAAATCATC+AGG | 0.464376 | 6:+98597608 | None:intergenic |
TATTACGATACTCCTTCATA+AGG | 0.465533 | 6:-98596538 | MsG0680035081.01.T01:CDS |
GGGGACTCGAGAGGACTTGG+AGG | 0.470344 | 6:+98597209 | None:intergenic |
GGCTATTATCCTTCAGGTAT+CGG | 0.471211 | 6:-98596969 | MsG0680035081.01.T01:CDS |
AATTGAAATCGACAGATCCT+TGG | 0.476621 | 6:-98597658 | MsG0680035081.01.T01:CDS |
TTATTCCTCCAACCGGAAGA+AGG | 0.483635 | 6:+98596511 | None:intergenic |
CCTTAAGGTCATTTCTAACA+TGG | 0.484592 | 6:+98597135 | None:intergenic |
ATATTCTTTATATCAAATGA+TGG | 0.485006 | 6:-98596627 | MsG0680035081.01.T01:CDS |
CACTTTCATAAGAAGGTGGC+GGG | 0.489349 | 6:+98597189 | None:intergenic |
GGATAGTCAACACAATCTAA+TGG | 0.489413 | 6:+98596675 | None:intergenic |
CAAATGATGGAGAACTGGTT+CGG | 0.490236 | 6:-98596614 | MsG0680035081.01.T01:CDS |
CCTCCAATTCAAGATAATGA+AGG | 0.493404 | 6:-98597341 | MsG0680035081.01.T01:CDS |
ATCATGCACATATGAGGGTA+GGG | 0.494550 | 6:+98596854 | None:intergenic |
CGTAACTACCAAGGAATTCA+AGG | 0.496567 | 6:-98597237 | MsG0680035081.01.T01:CDS |
CCATGTTAGAAATGACCTTA+AGG | 0.497271 | 6:-98597135 | MsG0680035081.01.T01:CDS |
AACATAACACTTTCATAAGA+AGG | 0.498338 | 6:+98597182 | None:intergenic |
AGGAAGGACCTTGAATTCCT+TGG | 0.499731 | 6:+98597229 | None:intergenic |
TGAGACAGATATACAACGTC+AGG | 0.509287 | 6:-98597420 | MsG0680035081.01.T01:CDS |
ACACAAATGGAGTGTGTCAT+TGG | 0.512503 | 6:-98596941 | MsG0680035081.01.T01:CDS |
TTAAATGTGTACGTAAATCA+TGG | 0.518948 | 6:-98597550 | MsG0680035081.01.T01:CDS |
GGTATCGGAGTACACACAAA+TGG | 0.521185 | 6:-98596954 | MsG0680035081.01.T01:CDS |
AACTCGGTGTGAAAGAATCA+TGG | 0.523056 | 6:-98596719 | MsG0680035081.01.T01:CDS |
GAAGTCCTTCTTCCGGTTGG+AGG | 0.524224 | 6:-98596516 | MsG0680035081.01.T01:CDS |
ATCAGTTAGAGGCATACAAT+GGG | 0.526587 | 6:+98597097 | None:intergenic |
TGTGTTGACTATCCTATTGG+AGG | 0.532088 | 6:-98596666 | MsG0680035081.01.T01:CDS |
GGATGGATTTGATGATTGCA+TGG | 0.537721 | 6:-98596916 | MsG0680035081.01.T01:CDS |
AAGGAAGTCCTTCTTCCGGT+TGG | 0.538367 | 6:-98596519 | MsG0680035081.01.T01:CDS |
TCATTATCTTGAATTGGAGG+TGG | 0.539264 | 6:+98597344 | None:intergenic |
ACAGTTTAAGAAGTAACTCA+TGG | 0.542924 | 6:-98597019 | MsG0680035081.01.T01:CDS |
TGTATTGGTGGATAGACGAT+TGG | 0.547265 | 6:-98596820 | MsG0680035081.01.T01:CDS |
AATCATGCACATATGAGGGT+AGG | 0.548656 | 6:+98596853 | None:intergenic |
GTTGACTATCCTATTGGAGG+AGG | 0.550265 | 6:-98596663 | MsG0680035081.01.T01:CDS |
ACTCGAGAGGACTTGGAGGA+AGG | 0.556210 | 6:+98597213 | None:intergenic |
GGCACTATTTGTTTCTACCA+AGG | 0.558987 | 6:-98597290 | MsG0680035081.01.T01:CDS |
GGAGTGTGTCATTGGTGGGA+TGG | 0.567100 | 6:-98596933 | MsG0680035081.01.T01:CDS |
CTTGATGTAGATATACCTAC+AGG | 0.570415 | 6:-98596990 | MsG0680035081.01.T01:CDS |
AATCAGTTAGAGGCATACAA+TGG | 0.573460 | 6:+98597096 | None:intergenic |
TGTTCTAAAGAATATATCGC+TGG | 0.581379 | 6:+98596878 | None:intergenic |
ATAGCTTGAGATAAAAGCAA+CGG | 0.585165 | 6:+98596782 | None:intergenic |
ACACTTTCATAAGAAGGTGG+CGG | 0.586857 | 6:+98597188 | None:intergenic |
AAATAATCATGCACATATGA+GGG | 0.592977 | 6:+98596849 | None:intergenic |
GAAGAAGGACTTCCTTATGA+AGG | 0.603700 | 6:+98596526 | None:intergenic |
GTGTGTACTCCGATACCTGA+AGG | 0.610364 | 6:+98596960 | None:intergenic |
GAAGGTGGCGGGGACTCGAG+AGG | 0.611417 | 6:+98597200 | None:intergenic |
ATATTGGATTATGTTGCTGA+TGG | 0.614293 | 6:-98597311 | MsG0680035081.01.T01:CDS |
TCATGCACATATGAGGGTAG+GGG | 0.621503 | 6:+98596855 | None:intergenic |
CCTGAAGGATAATAGCCTGT+AGG | 0.622424 | 6:+98596975 | None:intergenic |
CAAATGGAGTGTGTCATTGG+TGG | 0.626602 | 6:-98596938 | MsG0680035081.01.T01:CDS |
CAGTTTAAGAAGTAACTCAT+GGG | 0.630238 | 6:-98597018 | MsG0680035081.01.T01:CDS |
TTGACTATCCTATTGGAGGA+GGG | 0.632446 | 6:-98596662 | MsG0680035081.01.T01:CDS |
AAATGGAGTGTGTCATTGGT+GGG | 0.648608 | 6:-98596937 | MsG0680035081.01.T01:CDS |
TATTAGATGCAAAATTGAGG+CGG | 0.657699 | 6:+98597489 | None:intergenic |
TACCACCACATGACTCCATG+TGG | 0.658383 | 6:-98597049 | MsG0680035081.01.T01:CDS |
ACCTCCCACATGGAGTCATG+TGG | 0.659915 | 6:+98597044 | None:intergenic |
ATAACACTTTCATAAGAAGG+TGG | 0.660903 | 6:+98597185 | None:intergenic |
TCCCACATGGAGTCATGTGG+TGG | 0.661179 | 6:+98597047 | None:intergenic |
AATTTGGAACGTAACTACCA+AGG | 0.667394 | 6:-98597246 | MsG0680035081.01.T01:CDS |
ACCACCACATGACTCCATGT+GGG | 0.677409 | 6:-98597048 | MsG0680035081.01.T01:CDS |
ACCACATGACTCCATGTGGG+AGG | 0.683230 | 6:-98597045 | MsG0680035081.01.T01:CDS |
ACTTTCATAAGAAGGTGGCG+GGG | 0.686093 | 6:+98597190 | None:intergenic |
TAAACTGTATACCTCCCACA+TGG | 0.693493 | 6:+98597034 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTCTTTATATCAAATGA+TGG | - | Chr6:98597517-98597536 | MsG0680035081.01.T01:CDS | 15.0% |
!! | TAATAAAAATTACTCTTATG+TGG | - | Chr6:98596673-98596692 | MsG0680035081.01.T01:CDS | 15.0% |
!! | TAATGAAGGTTTATATATAT+TGG | - | Chr6:98596817-98596836 | MsG0680035081.01.T01:CDS | 15.0% |
!! | TAATACCGAAAATTACAATT+TGG | - | Chr6:98596882-98596901 | MsG0680035081.01.T01:CDS | 20.0% |
!!! | AGTTTTCACATATCAATTTT+AGG | - | Chr6:98597400-98597419 | MsG0680035081.01.T01:CDS | 20.0% |
!!! | TGATTATTTTGGTTTTGTAT+TGG | - | Chr6:98597309-98597328 | MsG0680035081.01.T01:CDS | 20.0% |
!!! | TTTTATTAGATGCAAAATTG+AGG | + | Chr6:98596661-98596680 | None:intergenic | 20.0% |
! | AAAATAATCATGCACATATG+AGG | + | Chr6:98597299-98597318 | None:intergenic | 25.0% |
! | AAACCTTCATTATCTTGAAT+TGG | + | Chr6:98596809-98596828 | None:intergenic | 25.0% |
! | AAATAATCATGCACATATGA+GGG | + | Chr6:98597298-98597317 | None:intergenic | 25.0% |
! | AACATAACACTTTCATAAGA+AGG | + | Chr6:98596965-98596984 | None:intergenic | 25.0% |
! | AATCGAATCAAAGATTTAAG+AGG | + | Chr6:98596575-98596594 | None:intergenic | 25.0% |
! | AGAATAAGGTCAAATTAGAT+TGG | - | Chr6:98596777-98596796 | MsG0680035081.01.T01:CDS | 25.0% |
! | TTAAATGTGTACGTAAATCA+TGG | - | Chr6:98596594-98596613 | MsG0680035081.01.T01:CDS | 25.0% |
!! | ACGTTCCAAATTGTAATTTT+CGG | + | Chr6:98596890-98596909 | None:intergenic | 25.0% |
!! | TCATATGTGCATGATTATTT+TGG | - | Chr6:98597298-98597317 | MsG0680035081.01.T01:CDS | 25.0% |
!!! | ATATCAATTTTAGGTGAACT+CGG | - | Chr6:98597409-98597428 | MsG0680035081.01.T01:CDS | 25.0% |
!!! | TTATTTTGGTTTTGTATTGG+TGG | - | Chr6:98597312-98597331 | MsG0680035081.01.T01:CDS | 25.0% |
ACAGTTTAAGAAGTAACTCA+TGG | - | Chr6:98597125-98597144 | MsG0680035081.01.T01:CDS | 30.0% | |
ATAACACTTTCATAAGAAGG+TGG | + | Chr6:98596962-98596981 | None:intergenic | 30.0% | |
ATAGCTTGAGATAAAAGCAA+CGG | + | Chr6:98597365-98597384 | None:intergenic | 30.0% | |
ATATTGGATTATGTTGCTGA+TGG | - | Chr6:98596833-98596852 | MsG0680035081.01.T01:CDS | 30.0% | |
ATGGAGAATGTAAAATCATC+AGG | + | Chr6:98596539-98596558 | None:intergenic | 30.0% | |
CAGTTTAAGAAGTAACTCAT+GGG | - | Chr6:98597126-98597145 | MsG0680035081.01.T01:CDS | 30.0% | |
CTACATGTTGAATTACCTTA+AGG | + | Chr6:98597027-98597046 | None:intergenic | 30.0% | |
GGTACATGTTCATGAAATAA+GGG | + | Chr6:98596637-98596656 | None:intergenic | 30.0% | |
TATTACGATACTCCTTCATA+AGG | - | Chr6:98597606-98597625 | MsG0680035081.01.T01:CDS | 30.0% | |
TATTAGATGCAAAATTGAGG+CGG | + | Chr6:98596658-98596677 | None:intergenic | 30.0% | |
TCACTTTCAAAATCAGTTAG+AGG | + | Chr6:98597061-98597080 | None:intergenic | 30.0% | |
! | AGTGTTATGTTTTCACTTCA+TGG | - | Chr6:98596974-98596993 | MsG0680035081.01.T01:CDS | 30.0% |
! | ATGTTTTCACTTCATGGATT+TGG | - | Chr6:98596980-98596999 | MsG0680035081.01.T01:CDS | 30.0% |
! | TATATCAAATGATGGAGAAC+TGG | - | Chr6:98597525-98597544 | MsG0680035081.01.T01:CDS | 30.0% |
! | TTTTCGGTATTATCAAACCT+TGG | + | Chr6:98596874-98596893 | None:intergenic | 30.0% |
!! | AAGAGGCAATTTTGATAGAA+TGG | + | Chr6:98596558-98596577 | None:intergenic | 30.0% |
!! | TGTTCTAAAGAATATATCGC+TGG | + | Chr6:98597269-98597288 | None:intergenic | 30.0% |
AATTGAAATCGACAGATCCT+TGG | - | Chr6:98596486-98596505 | MsG0680035081.01.T01:CDS | 35.0% | |
ATCTGTCTCAAGTGAATCTA+AGG | + | Chr6:98596714-98596733 | None:intergenic | 35.0% | |
CCATGTTAGAAATGACCTTA+AGG | - | Chr6:98597009-98597028 | MsG0680035081.01.T01:CDS | 35.0% | |
CCTCCAATTCAAGATAATGA+AGG | - | Chr6:98596803-98596822 | MsG0680035081.01.T01:CDS | 35.0% | |
CCTTAAGGTCATTTCTAACA+TGG | + | Chr6:98597012-98597031 | None:intergenic | 35.0% | |
CCTTCATTATCTTGAATTGG+AGG | + | Chr6:98596806-98596825 | None:intergenic | 35.0% | |
CGGTACATGTTCATGAAATA+AGG | + | Chr6:98596638-98596657 | None:intergenic | 35.0% | |
CTTGATGTAGATATACCTAC+AGG | - | Chr6:98597154-98597173 | MsG0680035081.01.T01:CDS | 35.0% | |
GGATAGTCAACACAATCTAA+TGG | + | Chr6:98597472-98597491 | None:intergenic | 35.0% | |
TCATTATCTTGAATTGGAGG+TGG | + | Chr6:98596803-98596822 | None:intergenic | 35.0% | |
! | AATCAGTTAGAGGCATACAA+TGG | + | Chr6:98597051-98597070 | None:intergenic | 35.0% |
! | AATTTGGAACGTAACTACCA+AGG | - | Chr6:98596898-98596917 | MsG0680035081.01.T01:CDS | 35.0% |
! | ATCAGTTAGAGGCATACAAT+GGG | + | Chr6:98597050-98597069 | None:intergenic | 35.0% |
! | TGGACTAAACTCTTTGTTGT+TGG | - | Chr6:98597445-98597464 | MsG0680035081.01.T01:CDS | 35.0% |
!! | ACACTTTTTATTCCTCCAAC+CGG | + | Chr6:98597643-98597662 | None:intergenic | 35.0% |
!! | GATTGTGTTGACTATCCTAT+TGG | - | Chr6:98597475-98597494 | MsG0680035081.01.T01:CDS | 35.0% |
AATCATGCACATATGAGGGT+AGG | + | Chr6:98597294-98597313 | None:intergenic | 40.0% | |
ACACAAATGGAGTGTGTCAT+TGG | - | Chr6:98597203-98597222 | MsG0680035081.01.T01:CDS | 40.0% | |
ACACTTTCATAAGAAGGTGG+CGG | + | Chr6:98596959-98596978 | None:intergenic | 40.0% | |
AGATCCTTGGACAGCTAAAA+AGG | - | Chr6:98596499-98596518 | MsG0680035081.01.T01:CDS | 40.0% | |
ATCATGCACATATGAGGGTA+GGG | + | Chr6:98597293-98597312 | None:intergenic | 40.0% | |
CGTAACTACCAAGGAATTCA+AGG | - | Chr6:98596907-98596926 | MsG0680035081.01.T01:CDS | 40.0% | |
GAAGAAGGACTTCCTTATGA+AGG | + | Chr6:98597621-98597640 | None:intergenic | 40.0% | |
GGCTATTATCCTTCAGGTAT+CGG | - | Chr6:98597175-98597194 | MsG0680035081.01.T01:CDS | 40.0% | |
TAAACTGTATACCTCCCACA+TGG | + | Chr6:98597113-98597132 | None:intergenic | 40.0% | |
TCATAAGGAAGTCCTTCTTC+CGG | - | Chr6:98597621-98597640 | MsG0680035081.01.T01:CDS | 40.0% | |
TGAGACAGATATACAACGTC+AGG | - | Chr6:98596724-98596743 | MsG0680035081.01.T01:CDS | 40.0% | |
TGGGGAGAAATTCGAGAATA+AGG | - | Chr6:98596763-98596782 | MsG0680035081.01.T01:CDS | 40.0% | |
TTGACTATCCTATTGGAGGA+GGG | - | Chr6:98597482-98597501 | MsG0680035081.01.T01:CDS | 40.0% | |
! | AAATGGAGTGTGTCATTGGT+GGG | - | Chr6:98597207-98597226 | MsG0680035081.01.T01:CDS | 40.0% |
! | AGGCAATGTTTTCGCTGTAT+GGG | - | Chr6:98596744-98596763 | MsG0680035081.01.T01:CDS | 40.0% |
! | CAAATGATGGAGAACTGGTT+CGG | - | Chr6:98597530-98597549 | MsG0680035081.01.T01:CDS | 40.0% |
! | GGATGGATTTGATGATTGCA+TGG | - | Chr6:98597228-98597247 | MsG0680035081.01.T01:CDS | 40.0% |
! | TGTATTGGTGGATAGACGAT+TGG | - | Chr6:98597324-98597343 | MsG0680035081.01.T01:CDS | 40.0% |
!! | AACTCGGTGTGAAAGAATCA+TGG | - | Chr6:98597425-98597444 | MsG0680035081.01.T01:CDS | 40.0% |
!! | GGCACTATTTGTTTCTACCA+AGG | - | Chr6:98596854-98596873 | MsG0680035081.01.T01:CDS | 40.0% |
!! | TGTGTTGACTATCCTATTGG+AGG | - | Chr6:98597478-98597497 | MsG0680035081.01.T01:CDS | 40.0% |
!!! | CTAACCTTTTTAGCTGTCCA+AGG | + | Chr6:98596506-98596525 | None:intergenic | 40.0% |
ACTTTCATAAGAAGGTGGCG+GGG | + | Chr6:98596957-98596976 | None:intergenic | 45.0% | |
AGGAAGGACCTTGAATTCCT+TGG | + | Chr6:98596918-98596937 | None:intergenic | 45.0% | |
CACTTTCATAAGAAGGTGGC+GGG | + | Chr6:98596958-98596977 | None:intergenic | 45.0% | |
CCTACAGGCTATTATCCTTC+AGG | - | Chr6:98597169-98597188 | MsG0680035081.01.T01:CDS | 45.0% | |
CCTATTGGAGGAGGGAATAA+AGG | - | Chr6:98597490-98597509 | MsG0680035081.01.T01:CDS | 45.0% | |
CCTGAAGGATAATAGCCTGT+AGG | + | Chr6:98597172-98597191 | None:intergenic | 45.0% | |
CCTTTATTCCCTCCTCCAAT+AGG | + | Chr6:98597493-98597512 | None:intergenic | 45.0% | |
GTTGACTATCCTATTGGAGG+AGG | - | Chr6:98597481-98597500 | MsG0680035081.01.T01:CDS | 45.0% | |
TCATGCACATATGAGGGTAG+GGG | + | Chr6:98597292-98597311 | None:intergenic | 45.0% | |
TTATTCCTCCAACCGGAAGA+AGG | + | Chr6:98597636-98597655 | None:intergenic | 45.0% | |
! | CAAATGGAGTGTGTCATTGG+TGG | - | Chr6:98597206-98597225 | MsG0680035081.01.T01:CDS | 45.0% |
! | CAGGCAATGTTTTCGCTGTA+TGG | - | Chr6:98596743-98596762 | MsG0680035081.01.T01:CDS | 45.0% |
! | GGCAATGTTTTCGCTGTATG+GGG | - | Chr6:98596745-98596764 | MsG0680035081.01.T01:CDS | 45.0% |
! | GGTATCGGAGTACACACAAA+TGG | - | Chr6:98597190-98597209 | MsG0680035081.01.T01:CDS | 45.0% |
AAGGAAGTCCTTCTTCCGGT+TGG | - | Chr6:98597625-98597644 | MsG0680035081.01.T01:CDS | 50.0% | |
ACCACCACATGACTCCATGT+GGG | - | Chr6:98597096-98597115 | MsG0680035081.01.T01:CDS | 50.0% | |
GTGTGTACTCCGATACCTGA+AGG | + | Chr6:98597187-98597206 | None:intergenic | 50.0% | |
TACCACCACATGACTCCATG+TGG | - | Chr6:98597095-98597114 | MsG0680035081.01.T01:CDS | 50.0% | |
ACCACATGACTCCATGTGGG+AGG | - | Chr6:98597099-98597118 | MsG0680035081.01.T01:CDS | 55.0% | |
ACCTCCCACATGGAGTCATG+TGG | + | Chr6:98597103-98597122 | None:intergenic | 55.0% | |
ACTCGAGAGGACTTGGAGGA+AGG | + | Chr6:98596934-98596953 | None:intergenic | 55.0% | |
GAAGTCCTTCTTCCGGTTGG+AGG | - | Chr6:98597628-98597647 | MsG0680035081.01.T01:CDS | 55.0% | |
TCCCACATGGAGTCATGTGG+TGG | + | Chr6:98597100-98597119 | None:intergenic | 55.0% | |
! | GGAGTGTGTCATTGGTGGGA+TGG | - | Chr6:98597211-98597230 | MsG0680035081.01.T01:CDS | 55.0% |
GGGGACTCGAGAGGACTTGG+AGG | + | Chr6:98596938-98596957 | None:intergenic | 65.0% | |
GGCGGGGACTCGAGAGGACT+TGG | + | Chr6:98596941-98596960 | None:intergenic | 70.0% | |
!! | GAAGGTGGCGGGGACTCGAG+AGG | + | Chr6:98596947-98596966 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 98596479 | 98597687 | 98596479 | ID=MsG0680035081.01;Name=MsG0680035081.01 |
Chr6 | mRNA | 98596479 | 98597687 | 98596479 | ID=MsG0680035081.01.T01;Parent=MsG0680035081.01;Name=MsG0680035081.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|402 |
Chr6 | exon | 98596479 | 98597687 | 98596479 | ID=MsG0680035081.01.T01:exon:14003;Parent=MsG0680035081.01.T01 |
Chr6 | CDS | 98596479 | 98597687 | 98596479 | ID=MsG0680035081.01.T01:cds;Parent=MsG0680035081.01.T01 |
Gene Sequence |
Protein sequence |