AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007175.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007175.01.T01 MTR_2g021800 89.713 418 31 3 1 407 1 417 0.0 754
MsG0280007175.01.T01 MTR_2g022000 87.864 412 39 3 1 402 1 411 0.0 733
MsG0280007175.01.T01 MTR_2g021770 53.528 411 175 7 8 407 3 408 9.82e-143 412
MsG0280007175.01.T01 MTR_2g021950 51.724 406 179 5 1 402 1 393 7.46e-137 397
MsG0280007175.01.T01 MTR_0129s0050 49.881 421 183 12 1 406 1 408 1.60e-118 351
MsG0280007175.01.T01 MTR_8g063440 48.000 400 182 8 12 407 7 384 2.47e-118 350
MsG0280007175.01.T01 MTR_0129s0070 49.760 416 181 13 1 407 1 397 1.04e-117 348
MsG0280007175.01.T01 MTR_4g055820 48.324 358 173 5 12 364 9 359 2.13e-112 333
MsG0280007175.01.T01 MTR_0129s0120 48.792 414 184 13 1 405 1 395 5.89e-112 334
MsG0280007175.01.T01 MTR_2g104340 47.395 403 191 11 12 407 9 397 5.20e-110 329
MsG0280007175.01.T01 MTR_4g102410 47.002 417 196 12 1 404 44 448 6.41e-109 328
MsG0280007175.01.T01 MTR_7g069550 46.851 397 187 11 12 398 9 391 9.73e-108 323
MsG0280007175.01.T01 MTR_0054s0090 45.154 423 200 12 1 407 1 407 2.94e-107 322
MsG0280007175.01.T01 MTR_8g041270 45.000 420 201 13 4 407 2 407 3.86e-107 322
MsG0280007175.01.T01 MTR_5g096630 46.229 411 196 9 12 406 13 414 2.03e-106 320
MsG0280007175.01.T01 MTR_4g117550 47.242 417 167 14 1 407 1 374 2.72e-106 318
MsG0280007175.01.T01 MTR_2g038680 44.762 420 204 10 3 405 2 410 1.59e-104 315
MsG0280007175.01.T01 MTR_6g086825 45.933 418 199 9 4 407 57 461 3.80e-104 316
MsG0280007175.01.T01 MTR_0054s0100 44.393 428 198 14 1 407 1 409 4.36e-104 314
MsG0280007175.01.T01 MTR_5g097330 44.444 414 196 9 9 406 8 403 3.00e-102 309
MsG0280007175.01.T01 MTR_2g104280 44.363 408 203 10 12 406 9 405 6.05e-102 308
MsG0280007175.01.T01 MTR_0134s0060 44.794 413 189 12 9 396 4 402 8.75e-102 308
MsG0280007175.01.T01 MTR_6g090180 44.737 418 201 10 1 402 31 434 9.97e-100 304
MsG0280007175.01.T01 MTR_1g007410 46.420 405 182 13 9 398 14 398 2.78e-99 301
MsG0280007175.01.T01 MTR_4g028510 43.276 409 191 11 17 406 16 402 6.21e-99 303
MsG0280007175.01.T01 MTR_5g072060 46.194 381 167 8 13 386 2 351 1.60e-98 306
MsG0280007175.01.T01 MTR_6g079770 42.206 417 212 10 1 397 1 408 2.41e-98 300
MsG0280007175.01.T01 MTR_1g007450 47.545 387 176 12 12 388 7 376 3.84e-98 299
MsG0280007175.01.T01 MTR_4g130330 42.961 412 192 11 14 406 4 391 7.51e-98 297
MsG0280007175.01.T01 MTR_2g066170 43.415 410 197 14 8 407 3 387 2.99e-97 296
MsG0280007175.01.T01 MTR_8g464770 45.269 391 185 9 12 398 7 372 3.53e-97 295
MsG0280007175.01.T01 MTR_4g028680 42.308 416 191 11 14 407 13 401 7.58e-97 295
MsG0280007175.01.T01 MTR_2g064950 44.304 395 196 11 12 399 5 382 8.32e-97 295
MsG0280007175.01.T01 MTR_6g079810 43.990 416 201 13 1 398 54 455 4.38e-96 295
MsG0280007175.01.T01 MTR_2g066200 42.054 409 204 10 9 407 4 389 4.46e-96 293
MsG0280007175.01.T01 MTR_5g037680 44.118 408 177 13 11 398 2 378 8.24e-96 294
MsG0280007175.01.T01 MTR_6g080680 44.391 419 178 14 1 397 1 386 1.78e-95 291
MsG0280007175.01.T01 MTR_8g012090 45.573 384 137 10 9 377 8 334 8.49e-95 288
MsG0280007175.01.T01 MTR_0831s0010 42.446 417 200 14 1 405 32 420 8.89e-95 291
MsG0280007175.01.T01 MTR_3g011120 44.757 391 177 13 14 396 11 370 2.18e-94 288
MsG0280007175.01.T01 MTR_5g069390 43.842 406 194 11 12 399 21 410 9.16e-94 290
MsG0280007175.01.T01 MTR_5g074800 46.286 350 167 8 56 398 1 336 1.49e-93 285
MsG0280007175.01.T01 MTR_5g097350 43.961 414 189 13 1 402 1 383 4.69e-93 285
MsG0280007175.01.T01 MTR_8g039500 44.855 379 165 13 8 377 3 346 7.22e-93 283
MsG0280007175.01.T01 MTR_4g028750 42.157 408 190 12 1 390 1 380 1.13e-92 285
MsG0280007175.01.T01 MTR_8g467670 40.732 410 202 11 7 407 3 380 1.50e-92 284
MsG0280007175.01.T01 MTR_2g034700 43.066 411 182 13 6 403 2 373 3.21e-92 282
MsG0280007175.01.T01 MTR_5g097680 41.972 436 214 9 1 406 1 427 4.29e-92 284
MsG0280007175.01.T01 MTR_7g017040 43.341 413 203 10 6 406 5 398 6.66e-92 282
MsG0280007175.01.T01 MTR_7g017130 40.547 402 217 7 12 407 13 398 1.60e-91 281
MsG0280007175.01.T01 MTR_4g028660 40.741 405 204 10 14 403 13 396 6.97e-91 280
MsG0280007175.01.T01 MTR_4g027450 40.741 405 204 10 14 403 13 396 6.97e-91 280
MsG0280007175.01.T01 MTR_8g013000 46.133 362 175 9 12 366 5 353 1.51e-90 279
MsG0280007175.01.T01 MTR_5g097220 42.488 426 207 11 1 406 1 408 1.18e-89 277
MsG0280007175.01.T01 MTR_6g461660 41.667 420 207 11 2 406 4 400 1.72e-89 276
MsG0280007175.01.T01 MTR_5g024260 42.821 397 176 14 14 388 19 386 4.08e-89 276
MsG0280007175.01.T01 MTR_5g059430 41.487 417 197 12 12 399 21 419 4.70e-89 276
MsG0280007175.01.T01 MTR_7g017170 39.646 396 217 7 12 403 13 390 5.33e-89 275
MsG0280007175.01.T01 MTR_8g064890 41.827 416 202 13 4 407 2 389 1.74e-87 271
MsG0280007175.01.T01 MTR_2g021920 53.333 255 116 2 149 402 17 269 3.25e-86 263
MsG0280007175.01.T01 MTR_4g014370 39.767 430 202 12 10 406 4 409 1.02e-85 267
MsG0280007175.01.T01 MTR_7g079640 41.538 390 184 9 16 397 12 365 1.12e-85 266
MsG0280007175.01.T01 MTR_8g033140 39.408 439 210 12 4 407 2 419 1.21e-85 267
MsG0280007175.01.T01 MTR_7g111700 41.608 423 174 11 1 407 1 366 5.22e-85 264
MsG0280007175.01.T01 MTR_2g065860 39.903 411 204 12 12 407 7 389 1.86e-84 263
MsG0280007175.01.T01 MTR_2g066150 39.320 412 185 14 8 407 3 361 2.78e-84 261
MsG0280007175.01.T01 MTR_8g032980 40.449 445 197 17 5 407 4 422 1.77e-83 261
MsG0280007175.01.T01 MTR_6g478230 40.271 442 195 12 1 407 1 408 1.11e-82 259
MsG0280007175.01.T01 MTR_5g091140 41.071 392 197 11 2 387 33 396 8.21e-82 257
MsG0280007175.01.T01 MTR_6g090250 41.709 398 188 12 35 398 29 416 6.70e-80 252
MsG0280007175.01.T01 MTR_5g092850 41.220 410 194 13 16 403 15 399 2.10e-79 251
MsG0280007175.01.T01 MTR_1g007430 46.264 348 148 12 28 366 7 324 3.94e-79 247
MsG0280007175.01.T01 MTR_5g096910 39.765 425 203 11 1 405 1 392 5.74e-79 249
MsG0280007175.01.T01 MTR_1g053510 39.524 420 207 12 5 399 2 399 4.52e-77 244
MsG0280007175.01.T01 MTR_5g074850 43.511 393 182 14 12 385 30 401 5.30e-77 256
MsG0280007175.01.T01 MTR_4g007940 40.708 339 157 10 88 404 26 342 8.01e-76 239
MsG0280007175.01.T01 MTR_2g065840 38.462 416 200 13 12 405 7 388 1.01e-75 241
MsG0280007175.01.T01 MTR_5g064700 41.425 379 179 11 58 406 3 368 1.37e-75 239
MsG0280007175.01.T01 MTR_1g098180 37.055 421 197 12 1 407 1 367 6.80e-74 235
MsG0280007175.01.T01 MTR_8g046310 39.614 414 187 18 4 399 3 371 1.73e-73 234
MsG0280007175.01.T01 MTR_5g022850 42.735 351 185 10 64 407 13 354 3.59e-73 233
MsG0280007175.01.T01 MTR_8g063330 39.247 372 184 12 8 363 3 348 2.55e-72 234
MsG0280007175.01.T01 MTR_5g075370 40.964 415 188 17 14 402 5 388 8.57e-72 240
MsG0280007175.01.T01 MTR_8g046200 39.627 429 186 17 15 398 14 414 2.72e-71 230
MsG0280007175.01.T01 MTR_5g096900 42.450 351 135 11 8 331 3 313 8.46e-71 226
MsG0280007175.01.T01 MTR_6g078010 40.741 351 152 8 66 398 15 327 1.57e-70 226
MsG0280007175.01.T01 MTR_7g016930 41.033 329 154 7 12 337 11 302 6.95e-69 221
MsG0280007175.01.T01 MTR_5g092860 39.237 367 179 12 35 389 20 354 7.11e-68 219
MsG0280007175.01.T01 MTR_8g033110 36.697 436 202 16 14 406 11 415 1.21e-66 218
MsG0280007175.01.T01 MTR_8g063310 33.902 410 231 13 6 402 11 393 1.30e-65 215
MsG0280007175.01.T01 MTR_8g033090 36.580 421 220 13 14 406 11 412 3.89e-64 211
MsG0280007175.01.T01 MTR_8g046220 34.824 425 225 12 1 399 1 399 2.00e-63 209
MsG0280007175.01.T01 MTR_8g063350 33.172 413 191 13 5 403 2 343 4.10e-63 206
MsG0280007175.01.T01 MTR_8g063370 33.575 414 221 15 2 398 8 384 8.03e-63 207
MsG0280007175.01.T01 MTR_5g086590 45.122 246 110 4 135 380 11 231 1.85e-61 199
MsG0280007175.01.T01 MTR_5g094350 40.604 298 130 7 13 293 9 276 2.87e-61 199
MsG0280007175.01.T01 MTR_6g079790 41.925 322 158 10 102 407 2 310 5.02e-61 200
MsG0280007175.01.T01 MTR_7g104710 40.181 331 139 10 1 320 1 283 2.29e-60 198
MsG0280007175.01.T01 MTR_8g018110 35.407 418 214 15 14 406 11 397 6.19e-60 200
MsG0280007175.01.T01 MTR_5g043605 40.000 310 151 9 96 398 50 331 6.74e-60 199
MsG0280007175.01.T01 MTR_6g004450 47.083 240 104 8 169 405 49 268 2.55e-58 192
MsG0280007175.01.T01 MTR_1g050312 38.906 329 141 13 83 401 9 287 1.02e-56 188
MsG0280007175.01.T01 MTR_6g087620 39.875 321 137 10 90 396 1 279 1.27e-55 185
MsG0280007175.01.T01 MTR_6g090260 52.128 188 82 4 215 398 73 256 7.37e-55 182
MsG0280007175.01.T01 MTR_6g090260 53.521 71 30 2 1 68 1 71 2.24e-12 67.4
MsG0280007175.01.T01 MTR_5g076490 39.718 355 171 11 67 406 10 336 1.30e-54 184
MsG0280007175.01.T01 MTR_8g036970 33.598 378 164 11 21 387 2 303 7.85e-54 183
MsG0280007175.01.T01 MTR_7g023800 34.511 368 161 11 56 403 1 308 1.30e-53 181
MsG0280007175.01.T01 MTR_8g033000 35.659 387 191 14 54 406 1 363 2.40e-53 181
MsG0280007175.01.T01 MTR_5g097820 37.102 283 147 6 3 276 9 269 1.12e-49 169
MsG0280007175.01.T01 MTR_6g070880 43.697 238 113 7 11 234 26 256 3.87e-49 167
MsG0280007175.01.T01 MTR_6g071420 43.697 238 113 7 11 234 26 256 3.87e-49 167
MsG0280007175.01.T01 MTR_3g018750 40.562 249 129 6 168 406 2 241 4.03e-49 167
MsG0280007175.01.T01 MTR_5g023970 47.291 203 95 5 208 407 4 197 4.74e-49 165
MsG0280007175.01.T01 MTR_5g068490 36.334 311 158 10 99 407 6 278 7.49e-49 167
MsG0280007175.01.T01 MTR_1g050308 41.841 239 113 6 1 234 19 236 8.65e-49 169
MsG0280007175.01.T01 MTR_1g050308 48.673 113 53 3 298 407 238 348 2.22e-21 94.7
MsG0280007175.01.T01 MTR_5g037190 38.298 282 138 5 1 278 1 250 7.07e-48 164
MsG0280007175.01.T01 MTR_5g097850 51.295 193 76 6 221 405 62 244 2.07e-47 162
MsG0280007175.01.T01 MTR_2g104260 39.146 281 145 10 12 281 9 274 1.39e-46 161
MsG0280007175.01.T01 MTR_7g019250 36.918 279 135 8 117 385 166 413 2.60e-46 166
MsG0280007175.01.T01 MTR_6g465360 44.444 243 108 12 2 225 47 281 1.42e-45 159
MsG0280007175.01.T01 MTR_8g073570 46.243 173 88 4 9 180 2 170 8.96e-45 153
MsG0280007175.01.T01 MTR_5g098950 42.358 229 87 7 139 366 90 274 3.38e-44 155
MsG0280007175.01.T01 MTR_1g076810 41.564 243 113 8 1 233 1 224 1.04e-43 161
MsG0280007175.01.T01 MTR_4g016000 37.815 238 105 7 142 373 2 202 1.48e-41 146
MsG0280007175.01.T01 MTR_6g009350 42.308 208 101 7 166 371 5 195 3.44e-41 144
MsG0280007175.01.T01 MTR_1g115205 39.700 267 105 11 1 258 17 236 2.44e-40 144
MsG0280007175.01.T01 MTR_6g079730 52.857 140 63 2 262 398 3 142 2.11e-39 138
MsG0280007175.01.T01 MTR_8g064790 46.448 183 83 5 8 181 3 179 5.82e-39 143
MsG0280007175.01.T01 MTR_8g064790 43.125 160 80 4 250 407 188 338 7.87e-31 121
MsG0280007175.01.T01 MTR_5g097540 47.020 151 67 3 216 366 96 233 1.72e-36 135
MsG0280007175.01.T01 MTR_4g014370 39.796 196 106 4 214 406 151 337 5.36e-36 135
MsG0280007175.01.T01 MTR_4g014370 43.704 135 71 3 1 132 6 138 3.48e-26 108
MsG0280007175.01.T01 MTR_3g030620 43.827 162 81 5 245 399 17 175 2.14e-34 126
MsG0280007175.01.T01 MTR_5g066420 47.651 149 74 3 251 395 1 149 2.85e-34 125
MsG0280007175.01.T01 MTR_2g022020 52.586 116 55 0 287 402 1 116 6.95e-34 122
MsG0280007175.01.T01 MTR_3g019290 36.493 211 88 4 14 222 11 177 1.03e-33 124
MsG0280007175.01.T01 MTR_7g017150 39.604 202 112 5 209 407 74 268 5.08e-33 125
MsG0280007175.01.T01 MTR_7g017120 39.801 201 111 5 210 407 74 267 6.96e-33 124
MsG0280007175.01.T01 MTR_5g096070 44.048 168 61 5 13 177 22 159 4.86e-32 119
MsG0280007175.01.T01 MTR_8g035690 35.640 289 144 13 143 405 30 302 2.86e-31 121
MsG0280007175.01.T01 MTR_5g097650 43.871 155 73 4 10 161 13 156 6.57e-31 116
MsG0280007175.01.T01 MTR_4g133170 26.768 396 215 17 17 392 4 344 8.06e-29 116
MsG0280007175.01.T01 MTR_5g096920 41.935 155 80 4 251 402 1 148 8.93e-29 110
MsG0280007175.01.T01 MTR_1g047080 30.508 354 156 16 54 397 1 274 1.52e-28 113
MsG0280007175.01.T01 MTR_5g097660 53.153 111 49 2 292 399 3 113 1.63e-28 108
MsG0280007175.01.T01 MTR_5g086780 48.673 113 58 0 272 384 116 228 6.71e-28 110
MsG0280007175.01.T01 MTR_5g086780 42.400 125 62 4 1 118 1 122 1.79e-17 81.3
MsG0280007175.01.T01 MTR_4g023080 28.607 402 218 15 16 406 8 351 9.89e-28 112
MsG0280007175.01.T01 MTR_7g101200 35.931 231 108 9 136 365 37 228 3.37e-27 108
MsG0280007175.01.T01 MTR_5g091150 36.548 197 72 7 119 314 40 184 8.19e-26 103
MsG0280007175.01.T01 MTR_4g023090 25.666 413 239 14 12 402 11 377 4.36e-24 103
MsG0280007175.01.T01 MTR_5g036250 51.042 96 46 1 304 398 8 103 1.28e-23 97.4
MsG0280007175.01.T01 MTR_4g021785 25.815 399 234 13 16 406 8 352 1.92e-23 100
MsG0280007175.01.T01 MTR_1g068875 26.823 384 221 15 17 388 4 339 7.69e-23 99.4
MsG0280007175.01.T01 MTR_2g021860 51.087 92 42 1 100 188 13 104 8.26e-23 94.0
MsG0280007175.01.T01 MTR_0667s0010 26.361 349 191 13 13 341 2 304 2.10e-22 98.6
MsG0280007175.01.T01 MTR_5g096050 46.789 109 50 2 251 351 1 109 1.55e-21 89.7
MsG0280007175.01.T01 MTR_4g094400 43.810 105 48 1 248 341 7 111 3.71e-21 89.0
MsG0280007175.01.T01 MTR_2g021150 26.629 353 218 13 17 364 14 330 1.28e-20 92.8
MsG0280007175.01.T01 MTR_2g029990 25.320 391 245 12 18 401 52 402 1.78e-20 92.8
MsG0280007175.01.T01 MTR_4g023130 25.000 396 199 12 16 406 8 310 2.37e-20 91.3
MsG0280007175.01.T01 MTR_2g024110 24.405 336 195 13 17 341 4 291 6.78e-20 90.9
MsG0280007175.01.T01 MTR_5g070080 25.862 406 246 15 16 402 9 378 1.28e-19 90.1
MsG0280007175.01.T01 MTR_4g116330 24.703 421 230 14 12 406 18 377 1.86e-19 89.7
MsG0280007175.01.T01 MTR_1g068835 27.013 385 220 18 17 388 4 340 3.40e-19 89.0
MsG0280007175.01.T01 MTR_8g101580 25.373 402 231 17 17 401 45 394 4.63e-19 88.6
MsG0280007175.01.T01 MTR_3g047580 33.333 150 70 4 7 151 3 127 6.19e-19 82.8
MsG0280007175.01.T01 MTR_5g049560 37.333 150 72 5 54 184 1 147 1.35e-18 85.5
MsG0280007175.01.T01 MTR_3g034180 25.131 382 217 15 12 369 118 454 1.88e-18 87.4
MsG0280007175.01.T01 MTR_2g028130 24.860 358 201 15 13 344 1 316 6.17e-18 85.5
MsG0280007175.01.T01 MTR_0064s0160 25.126 398 262 14 16 399 41 416 9.15e-18 85.1
MsG0280007175.01.T01 MTR_3g034130 25.393 382 217 15 12 369 4 341 1.08e-17 84.3
MsG0280007175.01.T01 MTR_8g041440 52.113 71 34 0 9 79 7 77 3.09e-17 77.8
MsG0280007175.01.T01 MTR_5g057790 26.393 341 189 16 17 347 46 334 3.76e-17 83.2
MsG0280007175.01.T01 MTR_2g425980 25.762 361 185 15 13 341 1 310 3.79e-17 83.2
MsG0280007175.01.T01 MTR_3g013740 24.346 382 228 16 4 370 31 366 4.61e-17 82.8
MsG0280007175.01.T01 MTR_1g056710 25.876 371 199 15 3 363 25 329 8.65e-17 82.0
MsG0280007175.01.T01 MTR_5g057710 25.588 340 193 16 17 347 46 334 1.04e-16 81.6
MsG0280007175.01.T01 MTR_5g094360 41.284 109 52 4 147 254 40 137 1.16e-16 77.4
MsG0280007175.01.T01 MTR_4g023440 24.365 394 214 12 16 406 17 329 1.46e-16 80.5
MsG0280007175.01.T01 MTR_2g021155 24.548 387 224 14 20 390 39 373 1.48e-16 82.4
MsG0280007175.01.T01 MTR_2g028160 22.599 354 214 11 13 343 1 317 1.52e-16 81.3
MsG0280007175.01.T01 MTR_8g433040 24.020 408 250 10 2 402 3 357 2.55e-16 80.1
MsG0280007175.01.T01 MTR_8g032380 24.020 408 250 10 2 402 3 357 2.55e-16 80.1
MsG0280007175.01.T01 MTR_1g068860 26.608 342 196 15 17 347 4 301 2.68e-16 80.1
MsG0280007175.01.T01 MTR_3g014540 23.014 365 216 13 17 370 29 339 3.22e-16 80.1
MsG0280007175.01.T01 MTR_3g013770 25.691 362 200 16 4 346 15 326 4.01e-16 79.7
MsG0280007175.01.T01 MTR_4g023070 24.038 416 239 16 17 406 3 367 5.46e-16 79.3
MsG0280007175.01.T01 MTR_1g055135 25.474 369 228 17 16 378 12 339 7.58e-16 79.0
MsG0280007175.01.T01 MTR_4g117850 25.124 402 236 15 16 402 22 373 7.85e-16 79.0
MsG0280007175.01.T01 MTR_7g079370 25.338 296 175 11 124 402 83 349 1.03e-15 78.6
MsG0280007175.01.T01 MTR_3g007360 26.220 328 184 12 25 343 60 338 1.21e-15 78.6
MsG0280007175.01.T01 MTR_1g050305 49.398 83 37 2 309 386 21 103 1.66e-15 73.6
MsG0280007175.01.T01 MTR_7g070440 25.122 410 229 18 17 399 7 365 1.75e-15 77.8
MsG0280007175.01.T01 MTR_2g426070 23.704 405 226 15 18 388 7 362 1.75e-15 78.2
MsG0280007175.01.T01 MTR_0115s0020 24.586 423 251 18 16 404 9 397 2.54e-15 77.4
MsG0280007175.01.T01 MTR_2g028140 25.000 360 202 15 13 343 1 321 2.72e-15 77.4
MsG0280007175.01.T01 MTR_2g021190 25.558 403 247 15 9 401 13 372 4.21e-15 76.6
MsG0280007175.01.T01 MTR_7g407070 25.843 356 205 15 17 353 32 347 4.41e-15 76.6
MsG0280007175.01.T01 MTR_3g007410 26.205 332 181 14 25 344 60 339 5.45e-15 76.6
MsG0280007175.01.T01 MTR_5g048160 25.296 423 245 17 16 403 3 389 6.52e-15 76.3
MsG0280007175.01.T01 MTR_5g070130 23.501 417 246 18 9 402 3 369 7.19e-15 76.3
MsG0280007175.01.T01 MTR_3g083010 22.969 357 204 10 17 343 6 321 8.43e-15 75.9
MsG0280007175.01.T01 MTR_8g032390 23.487 413 235 16 2 402 25 368 8.69e-15 75.9
MsG0280007175.01.T01 MTR_6g087660 47.500 80 39 2 1 77 1 80 1.27e-14 72.4
MsG0280007175.01.T01 MTR_3g009310 23.757 362 207 13 2 346 20 329 1.37e-14 75.1
MsG0280007175.01.T01 MTR_1g068905 32.948 173 87 8 17 182 4 154 3.55e-14 73.2
MsG0280007175.01.T01 MTR_2g046920 23.907 389 207 17 17 373 24 355 3.80e-14 73.9
MsG0280007175.01.T01 MTR_4g023190 23.716 409 241 14 12 406 5 356 4.51e-14 73.6
MsG0280007175.01.T01 MTR_3g103020 23.342 407 246 14 16 406 19 375 4.68e-14 73.6
MsG0280007175.01.T01 MTR_2g026010 25.507 345 196 15 16 346 3 300 5.37e-14 73.6
MsG0280007175.01.T01 MTR_2g046900 26.879 346 180 16 17 343 28 319 5.47e-14 73.6
MsG0280007175.01.T01 MTR_4g121580 24.582 419 224 17 1 403 1 343 6.25e-14 73.2
MsG0280007175.01.T01 MTR_4g023120 23.058 412 240 15 17 402 3 363 8.24e-14 72.8
MsG0280007175.01.T01 MTR_4g117770 24.088 411 260 14 1 406 1 364 8.63e-14 72.8
MsG0280007175.01.T01 MTR_4g117810 24.088 411 260 14 1 406 1 364 8.63e-14 72.8
MsG0280007175.01.T01 MTR_5g070088 23.171 410 263 13 12 402 2 378 1.47e-13 72.0
MsG0280007175.01.T01 MTR_2g426060 23.249 357 202 15 13 343 2 312 1.70e-13 72.0
MsG0280007175.01.T01 MTR_3g007270 26.203 374 203 18 17 370 47 367 2.03e-13 71.6
MsG0280007175.01.T01 MTR_4g116330 23.753 421 195 15 12 406 18 338 2.40e-13 71.2
MsG0280007175.01.T01 MTR_5g022420 24.227 388 219 20 9 380 19 347 4.02e-13 70.9
MsG0280007175.01.T01 MTR_3g006570 23.514 370 205 15 17 370 21 328 6.24e-13 70.1
MsG0280007175.01.T01 MTR_6g053260 24.090 357 202 19 3 343 321 624 6.36e-13 70.9
MsG0280007175.01.T01 MTR_4g117720 26.073 303 181 11 117 407 104 375 7.17e-13 70.1
MsG0280007175.01.T01 MTR_0044s0300 24.699 332 195 11 17 343 38 319 8.16e-13 69.7
MsG0280007175.01.T01 MTR_4g070550 24.932 369 209 17 13 355 1 327 1.28e-12 69.3
MsG0280007175.01.T01 MTR_2g047832 25.575 348 194 14 17 343 29 332 1.38e-12 69.3
MsG0280007175.01.T01 MTR_3g014570 23.907 343 199 11 17 348 29 320 1.51e-12 68.9
MsG0280007175.01.T01 MTR_1g054725 22.222 396 261 14 15 401 18 375 1.89e-12 68.6
MsG0280007175.01.T01 MTR_2g031700 28.641 206 118 9 13 212 2 184 2.33e-12 67.8
MsG0280007175.01.T01 MTR_2g046830 25.369 339 182 16 19 343 27 308 2.39e-12 68.6
MsG0280007175.01.T01 MTR_4g122850 24.682 393 239 17 28 406 12 361 2.41e-12 68.2
MsG0280007175.01.T01 MTR_4g023150 23.601 411 240 16 12 406 5 357 2.64e-12 68.2
MsG0280007175.01.T01 MTR_2g426020 22.190 347 209 12 13 341 2 305 4.13e-12 67.8
MsG0280007175.01.T01 MTR_2g031640 24.633 341 192 15 17 343 6 295 4.45e-12 67.4
MsG0280007175.01.T01 MTR_2g024100 24.793 363 187 17 31 360 21 330 5.76e-12 67.4
MsG0280007175.01.T01 MTR_7g070830 21.508 451 270 18 1 403 8 422 7.42e-12 67.0
MsG0280007175.01.T01 MTR_8g073550 24.887 221 127 7 17 232 30 216 7.90e-12 65.1
MsG0280007175.01.T01 MTR_1g055375 25.680 331 200 13 16 340 3 293 9.00e-12 66.6
MsG0280007175.01.T01 MTR_3g010430 26.230 244 144 9 17 255 36 248 9.39e-12 66.6
MsG0280007175.01.T01 MTR_4g117780 24.810 395 251 13 17 406 11 364 1.41e-11 65.9
MsG0280007175.01.T01 MTR_2g055970 25.263 380 221 21 12 378 206 535 1.47e-11 66.6
MsG0280007175.01.T01 MTR_4g024890 23.097 381 217 15 18 367 11 346 1.54e-11 65.9
MsG0280007175.01.T01 MTR_3g047540 41.860 86 40 5 216 300 5 81 1.61e-11 60.5
MsG0280007175.01.T01 MTR_8g013010 24.528 265 163 9 16 278 53 282 1.78e-11 65.1
MsG0280007175.01.T01 MTR_3g036290 22.380 353 205 12 17 362 22 312 1.97e-11 65.5
MsG0280007175.01.T01 MTR_2g046800 27.706 231 131 10 17 220 14 235 2.24e-11 65.5
MsG0280007175.01.T01 MTR_7g055977 23.341 437 222 18 17 402 7 381 2.27e-11 65.5
MsG0280007175.01.T01 MTR_4g023200 22.762 391 230 15 31 406 24 357 3.23e-11 64.7
MsG0280007175.01.T01 MTR_6g060650 22.059 408 267 13 12 407 3 371 3.82e-11 64.7
MsG0280007175.01.T01 MTR_2g031680 22.879 389 238 16 13 388 2 341 6.10e-11 63.9
MsG0280007175.01.T01 MTR_4g109280 24.581 358 216 14 15 368 6 313 7.79e-11 63.5
MsG0280007175.01.T01 MTR_3g036430 22.460 374 203 15 17 385 20 311 7.82e-11 63.5
MsG0280007175.01.T01 MTR_2g021210 29.319 191 107 9 4 188 70 238 9.00e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007175.01.T01 AT3G06240 23.500 400 245 14 17 388 36 402 1.00e-19 90.9
MsG0280007175.01.T01 AT3G16210 27.429 175 103 5 13 187 1 151 4.09e-14 73.6
MsG0280007175.01.T01 AT4G12560 22.646 393 237 15 17 386 4 352 7.09e-12 67.0
MsG0280007175.01.T01 AT4G12560 22.646 393 237 15 17 386 4 352 7.09e-12 67.0
MsG0280007175.01.T01 AT4G12560 22.646 393 237 15 17 386 4 352 7.09e-12 67.0

Find 84 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCCAAGATATTTATATTT+TGG 0.068715 2:+11478414 MsG0280007175.01.T01:CDS
AATGGCTTTGTTTGTCTTTC+TGG 0.080053 2:+11478451 MsG0280007175.01.T01:CDS
TCCACATTGTATTTCATTTC+GGG 0.177087 2:+11478337 MsG0280007175.01.T01:CDS
TTTCTATGATGTTATGTTTA+GGG 0.194456 2:+11478651 MsG0280007175.01.T01:CDS
CTTTCTATGATGTTATGTTT+AGG 0.220017 2:+11478650 MsG0280007175.01.T01:CDS
TATGTGATTGCTAACCTTTC+CGG 0.225084 2:-11478104 None:intergenic
AGGCAGTTGGTGATGTTAAA+TGG 0.234997 2:+11478979 MsG0280007175.01.T01:CDS
GTCCACATTGTATTTCATTT+CGG 0.271227 2:+11478336 MsG0280007175.01.T01:CDS
TTTGGATACACAGACGATTA+AGG 0.307085 2:+11479197 MsG0280007175.01.T01:CDS
CGGGTGAGAGATTTGAGAAT+AGG 0.325130 2:+11478356 MsG0280007175.01.T01:CDS
ATGTACCTATGGAACCCTTA+TGG 0.328898 2:+11478704 MsG0280007175.01.T01:CDS
TGCTTGAGCAAGAGGCTTCA+TGG 0.347958 2:+11478677 MsG0280007175.01.T01:CDS
TCACGTTAGGGATGATTATA+AGG 0.366829 2:+11478597 MsG0280007175.01.T01:CDS
GGGTGAGAGATTTGAGAATA+GGG 0.372328 2:+11478357 MsG0280007175.01.T01:CDS
AATTGATGTTGACATGTCTT+TGG 0.372606 2:+11478762 MsG0280007175.01.T01:CDS
TGGACTGAGCTCTTCATTGT+TGG 0.374621 2:+11479084 MsG0280007175.01.T01:CDS
AATACAATGTGGACCGGAAT+AGG 0.377529 2:-11478327 None:intergenic
GAGTCAGATAGTAATTTATA+AGG 0.379647 2:+11479242 MsG0280007175.01.T01:CDS
TCACTCCCATTTCAAGTGCT+TGG 0.382937 2:+11478394 MsG0280007175.01.T01:CDS
TGTACCTATGGAACCCTTAT+GGG 0.386788 2:+11478705 MsG0280007175.01.T01:CDS
TAGACTATATATCTCCCATA+AGG 0.393204 2:-11478719 None:intergenic
AACCCAAAATATAAATATCT+TGG 0.396929 2:-11478417 None:intergenic
ACATAACATCATAGAAAGAT+AGG 0.404955 2:-11478645 None:intergenic
GGTTTGGTTATGATCACGTT+AGG 0.405582 2:+11478584 MsG0280007175.01.T01:CDS
TTCTATATATGATACGATTC+CGG 0.408188 2:-11478246 None:intergenic
TCTTGGCCAAGCACTTGAAA+TGG 0.410814 2:-11478400 None:intergenic
TTGAGGATGAACACCTATTC+CGG 0.412719 2:+11478314 MsG0280007175.01.T01:CDS
GGACTGAGCTCTTCATTGTT+GGG 0.419703 2:+11479085 MsG0280007175.01.T01:CDS
TTGGGTTCTATCAGTATCAA+TGG 0.420727 2:+11478433 MsG0280007175.01.T01:CDS
ATGGAAAATGCAACATCATC+AGG 0.435609 2:-11478127 None:intergenic
AACAACTCAACAGGACTAGA+AGG 0.438850 2:-11478529 None:intergenic
TTCTATGATGTTATGTTTAG+GGG 0.456944 2:+11478652 MsG0280007175.01.T01:CDS
ATAGTCTAAGAAGCAACTCT+TGG 0.467205 2:+11478734 MsG0280007175.01.T01:CDS
GTTAAGTATCCCATCGAAGC+AGG 0.467476 2:+11479120 MsG0280007175.01.T01:CDS
GGCAGTTGGTGATGTTAAAT+GGG 0.475642 2:+11478980 MsG0280007175.01.T01:CDS
ATCATCAATATCTGAGGGCA+TGG 0.477975 2:-11478932 None:intergenic
TATCTTACGGCATACTATTG+AGG 0.478019 2:+11478297 MsG0280007175.01.T01:CDS
TAGGGGCTTGCTTGAGCAAG+AGG 0.480595 2:+11478669 MsG0280007175.01.T01:CDS
TTGCTAACCTTTCCGGTCGT+CGG 0.482886 2:-11478097 None:intergenic
CGATACGGTAACAACTCAAC+AGG 0.485016 2:-11478538 None:intergenic
TCTGCGACGCCGCCGACGAC+CGG 0.486077 2:+11478085 MsG0280007175.01.T01:CDS
TTGGTTTGATATCATACAGC+GGG 0.490095 2:+11479007 MsG0280007175.01.T01:CDS
GGGATGATTATAAGGTGATT+CGG 0.492394 2:+11478605 MsG0280007175.01.T01:CDS
CTTGGCCAAGCACTTGAAAT+GGG 0.493691 2:-11478399 None:intergenic
ACATTCCATCCATGTAGAAT+CGG 0.500352 2:-11478816 None:intergenic
GTGATGTTAAATGGGTCCAT+TGG 0.510640 2:+11478988 MsG0280007175.01.T01:CDS
ACAATGAATTCCTCGGTGGT+TGG 0.511426 2:-11478502 None:intergenic
ATGATGCAACTCTTATCTTA+CGG 0.512751 2:+11478284 MsG0280007175.01.T01:CDS
CTTATTTCATGAAAATCTAC+CGG 0.512763 2:+11478227 MsG0280007175.01.T01:CDS
TGTCGTAAAACACACCTCAT+TGG 0.514269 2:-11478908 None:intergenic
GTTTGGTTATGATCACGTTA+GGG 0.523471 2:+11478585 MsG0280007175.01.T01:CDS
ACATGGATGGAATGTGTCAT+TGG 0.528095 2:+11478824 MsG0280007175.01.T01:CDS
AGAAACTGTCCGATTCTACA+TGG 0.535925 2:+11478807 MsG0280007175.01.T01:CDS
TTGATATTAGATTGGTGAAG+AGG 0.537903 2:+11478959 MsG0280007175.01.T01:CDS
TCGAATCTACGTGTAAATCA+TGG 0.547146 2:+11478185 MsG0280007175.01.T01:CDS
CTGTTGAGTTGTTACCGTAT+CGG 0.551547 2:+11478539 MsG0280007175.01.T01:CDS
TAGATTGGTGAAGAGGCAGT+TGG 0.551561 2:+11478966 MsG0280007175.01.T01:CDS
AAAAGTATCATCAATATCTG+AGG 0.554789 2:-11478938 None:intergenic
AGACTATATATCTCCCATAA+GGG 0.557023 2:-11478718 None:intergenic
ACTGTCCGATTCTACATGGA+TGG 0.558237 2:+11478811 MsG0280007175.01.T01:CDS
ATCTCCCATAAGGGTTCCAT+AGG 0.569709 2:-11478709 None:intergenic
ATGAGAGAAAAGCTGTATTG+TGG 0.571810 2:+11478476 MsG0280007175.01.T01:CDS
AAATGAAATACAATGTGGAC+CGG 0.572222 2:-11478333 None:intergenic
AAAGCTTCAAACTTCCGATA+CGG 0.572690 2:-11478553 None:intergenic
ATTAAGGAGCTTGGTGTCGA+AGG 0.577519 2:+11479213 MsG0280007175.01.T01:CDS
ACACAGACGATTAAGGAGCT+TGG 0.578896 2:+11479204 MsG0280007175.01.T01:CDS
TTCATGGAAAGATGTACCTA+TGG 0.583204 2:+11478693 MsG0280007175.01.T01:CDS
AGGAATGACAATGAATTCCT+CGG 0.587440 2:-11478509 None:intergenic
CTAACCTTTCCGGTCGTCGG+CGG 0.588981 2:-11478094 None:intergenic
GCTGTATGATATCAAACCAA+TGG 0.602887 2:-11479004 None:intergenic
AAAGTATCATCAATATCTGA+GGG 0.608024 2:-11478937 None:intergenic
TCATCAATATCTGAGGGCAT+GGG 0.628539 2:-11478931 None:intergenic
GGATGGAATGTGTCATTGGT+GGG 0.632586 2:+11478828 MsG0280007175.01.T01:CDS
AAATTGGTGTAAAAGAATCG+TGG 0.633588 2:+11479064 MsG0280007175.01.T01:CDS
TTAAGTATCCCATCGAAGCA+GGG 0.636751 2:+11479121 MsG0280007175.01.T01:CDS
TGGATGGAATGTGTCATTGG+TGG 0.644088 2:+11478827 MsG0280007175.01.T01:CDS
GACGCCGCCGACGACCGGAA+AGG 0.650142 2:+11478090 MsG0280007175.01.T01:CDS
TCGATGGGATACTTAACATG+AGG 0.676580 2:-11479114 None:intergenic
TTCATTTGACGTGACCAATG+AGG 0.697919 2:+11478894 MsG0280007175.01.T01:CDS
ACCCGAAATGAAATACAATG+TGG 0.719713 2:-11478338 None:intergenic
TGGTTTGATATCATACAGCG+GGG 0.734151 2:+11479008 MsG0280007175.01.T01:CDS
ATTGGTTTGATATCATACAG+CGG 0.742154 2:+11479006 MsG0280007175.01.T01:CDS
AATGACAATGAATTCCTCGG+TGG 0.751896 2:-11478506 None:intergenic
ATTGTGGAATCCAACCACCG+AGG 0.810434 2:+11478492 MsG0280007175.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCTTCATAAAAAAAGA+TGG + Chr2:11479156-11479175 MsG0280007175.01.T01:CDS 15.0%
!! AACCCAAAATATAAATATCT+TGG - Chr2:11478420-11478439 None:intergenic 20.0%
!! TTTCTATGATGTTATGTTTA+GGG + Chr2:11478651-11478670 MsG0280007175.01.T01:CDS 20.0%
!!! TGATACTTTTGATATTAGAT+TGG + Chr2:11478951-11478970 MsG0280007175.01.T01:CDS 20.0%
! ACATAACATCATAGAAAGAT+AGG - Chr2:11478648-11478667 None:intergenic 25.0%
! ATTGAAAAAGATAGTGATGA+TGG + Chr2:11478856-11478875 MsG0280007175.01.T01:CDS 25.0%
! CTTATTTCATGAAAATCTAC+CGG + Chr2:11478227-11478246 MsG0280007175.01.T01:CDS 25.0%
! CTTTCTATGATGTTATGTTT+AGG + Chr2:11478650-11478669 MsG0280007175.01.T01:CDS 25.0%
! GAGTCAGATAGTAATTTATA+AGG + Chr2:11479242-11479261 MsG0280007175.01.T01:CDS 25.0%
! TTCTATATATGATACGATTC+CGG - Chr2:11478249-11478268 None:intergenic 25.0%
! TTCTATGATGTTATGTTTAG+GGG + Chr2:11478652-11478671 MsG0280007175.01.T01:CDS 25.0%
!! AAAGTATCATCAATATCTGA+GGG - Chr2:11478940-11478959 None:intergenic 25.0%
!! GGCCAAGATATTTATATTTT+GGG + Chr2:11478415-11478434 MsG0280007175.01.T01:CDS 25.0%
!! GGTAGATTTTCATGAAATAA+GGG - Chr2:11478228-11478247 None:intergenic 25.0%
!! TGGCCAAGATATTTATATTT+TGG + Chr2:11478414-11478433 MsG0280007175.01.T01:CDS 25.0%
!!! AAAAGTATCATCAATATCTG+AGG - Chr2:11478941-11478960 None:intergenic 25.0%
!!! AAGTTTGAAGCTTTTATTCA+TGG + Chr2:11478562-11478581 MsG0280007175.01.T01:CDS 25.0%
!!! AGAACTAGCTTGTTTTAATT+TGG + Chr2:11479179-11479198 MsG0280007175.01.T01:CDS 25.0%
!!! AGTTTGAAGCTTTTATTCAT+GGG + Chr2:11478563-11478582 MsG0280007175.01.T01:CDS 25.0%
!!! GTATCAATTTTAGGTGAAAT+TGG + Chr2:11479048-11479067 MsG0280007175.01.T01:CDS 25.0%
AAATGAAATACAATGTGGAC+CGG - Chr2:11478336-11478355 None:intergenic 30.0%
AAATTGGTGTAAAAGAATCG+TGG + Chr2:11479064-11479083 MsG0280007175.01.T01:CDS 30.0%
AATTGATGTTGACATGTCTT+TGG + Chr2:11478762-11478781 MsG0280007175.01.T01:CDS 30.0%
AGACTATATATCTCCCATAA+GGG - Chr2:11478721-11478740 None:intergenic 30.0%
ATGATGCAACTCTTATCTTA+CGG + Chr2:11478284-11478303 MsG0280007175.01.T01:CDS 30.0%
GTCCACATTGTATTTCATTT+CGG + Chr2:11478336-11478355 MsG0280007175.01.T01:CDS 30.0%
TAGACTATATATCTCCCATA+AGG - Chr2:11478722-11478741 None:intergenic 30.0%
TCCACATTGTATTTCATTTC+GGG + Chr2:11478337-11478356 MsG0280007175.01.T01:CDS 30.0%
TTGATATTAGATTGGTGAAG+AGG + Chr2:11478959-11478978 MsG0280007175.01.T01:CDS 30.0%
! AATCGCTTCAAAGATTTTAG+AGG - Chr2:11478166-11478185 None:intergenic 30.0%
! ACTCTTCACGTATCAATTTT+AGG + Chr2:11479039-11479058 MsG0280007175.01.T01:CDS 30.0%
! CGGTAGATTTTCATGAAATA+AGG - Chr2:11478229-11478248 None:intergenic 30.0%
!! ACAGTTTCTTCTTTTGTTTC+AGG - Chr2:11478796-11478815 None:intergenic 30.0%
!! AGTTTCTTCTTTTGTTTCAG+GGG - Chr2:11478794-11478813 None:intergenic 30.0%
!! ATTGGTTTGATATCATACAG+CGG + Chr2:11479006-11479025 MsG0280007175.01.T01:CDS 30.0%
!! CAGTTTCTTCTTTTGTTTCA+GGG - Chr2:11478795-11478814 None:intergenic 30.0%
!! TAGAGGCAATTTTGATAGAA+TGG - Chr2:11478149-11478168 None:intergenic 30.0%
AAAGCTTCAAACTTCCGATA+CGG - Chr2:11478556-11478575 None:intergenic 35.0%
ACATTCCATCCATGTAGAAT+CGG - Chr2:11478819-11478838 None:intergenic 35.0%
ACCCGAAATGAAATACAATG+TGG - Chr2:11478341-11478360 None:intergenic 35.0%
AGGAATGACAATGAATTCCT+CGG - Chr2:11478512-11478531 None:intergenic 35.0%
ATAGTCTAAGAAGCAACTCT+TGG + Chr2:11478734-11478753 MsG0280007175.01.T01:CDS 35.0%
ATGAGAGAAAAGCTGTATTG+TGG + Chr2:11478476-11478495 MsG0280007175.01.T01:CDS 35.0%
ATGGAAAATGCAACATCATC+AGG - Chr2:11478130-11478149 None:intergenic 35.0%
GCTGTATGATATCAAACCAA+TGG - Chr2:11479007-11479026 None:intergenic 35.0%
GGGATGATTATAAGGTGATT+CGG + Chr2:11478605-11478624 MsG0280007175.01.T01:CDS 35.0%
GTTTGGTTATGATCACGTTA+GGG + Chr2:11478585-11478604 MsG0280007175.01.T01:CDS 35.0%
TATCTTACGGCATACTATTG+AGG + Chr2:11478297-11478316 MsG0280007175.01.T01:CDS 35.0%
TATGTGATTGCTAACCTTTC+CGG - Chr2:11478107-11478126 None:intergenic 35.0%
TCACGTTAGGGATGATTATA+AGG + Chr2:11478597-11478616 MsG0280007175.01.T01:CDS 35.0%
TCGAATCTACGTGTAAATCA+TGG + Chr2:11478185-11478204 MsG0280007175.01.T01:CDS 35.0%
TTCATGGAAAGATGTACCTA+TGG + Chr2:11478693-11478712 MsG0280007175.01.T01:CDS 35.0%
TTGGGTTCTATCAGTATCAA+TGG + Chr2:11478433-11478452 MsG0280007175.01.T01:CDS 35.0%
TTTGGATACACAGACGATTA+AGG + Chr2:11479197-11479216 MsG0280007175.01.T01:CDS 35.0%
! GAAGCTTTTATTCATGGGTT+TGG + Chr2:11478568-11478587 MsG0280007175.01.T01:CDS 35.0%
! TTGGTTTGATATCATACAGC+GGG + Chr2:11479007-11479026 MsG0280007175.01.T01:CDS 35.0%
!! AATGGCTTTGTTTGTCTTTC+TGG + Chr2:11478451-11478470 MsG0280007175.01.T01:CDS 35.0%
!! GAAAAAGATAGTGATGATGG+TGG + Chr2:11478859-11478878 MsG0280007175.01.T01:CDS 35.0%
AACAACTCAACAGGACTAGA+AGG - Chr2:11478532-11478551 None:intergenic 40.0%
AATACAATGTGGACCGGAAT+AGG - Chr2:11478330-11478349 None:intergenic 40.0%
AATGACAATGAATTCCTCGG+TGG - Chr2:11478509-11478528 None:intergenic 40.0%
ACATGGATGGAATGTGTCAT+TGG + Chr2:11478824-11478843 MsG0280007175.01.T01:CDS 40.0%
AGAAACTGTCCGATTCTACA+TGG + Chr2:11478807-11478826 MsG0280007175.01.T01:CDS 40.0%
ATCATCAATATCTGAGGGCA+TGG - Chr2:11478935-11478954 None:intergenic 40.0%
ATGTACCTATGGAACCCTTA+TGG + Chr2:11478704-11478723 MsG0280007175.01.T01:CDS 40.0%
GGGTGAGAGATTTGAGAATA+GGG + Chr2:11478357-11478376 MsG0280007175.01.T01:CDS 40.0%
GTGATGTTAAATGGGTCCAT+TGG + Chr2:11478988-11479007 MsG0280007175.01.T01:CDS 40.0%
TCGATGGGATACTTAACATG+AGG - Chr2:11479117-11479136 None:intergenic 40.0%
TGGTTTGATATCATACAGCG+GGG + Chr2:11479008-11479027 MsG0280007175.01.T01:CDS 40.0%
TGTACCTATGGAACCCTTAT+GGG + Chr2:11478705-11478724 MsG0280007175.01.T01:CDS 40.0%
TGTCGTAAAACACACCTCAT+TGG - Chr2:11478911-11478930 None:intergenic 40.0%
TTAAGTATCCCATCGAAGCA+GGG + Chr2:11479121-11479140 MsG0280007175.01.T01:CDS 40.0%
TTCATTTGACGTGACCAATG+AGG + Chr2:11478894-11478913 MsG0280007175.01.T01:CDS 40.0%
TTGAGGATGAACACCTATTC+CGG + Chr2:11478314-11478333 MsG0280007175.01.T01:CDS 40.0%
! CTGTTGAGTTGTTACCGTAT+CGG + Chr2:11478539-11478558 MsG0280007175.01.T01:CDS 40.0%
! GGTTTGGTTATGATCACGTT+AGG + Chr2:11478584-11478603 MsG0280007175.01.T01:CDS 40.0%
! TCATCAATATCTGAGGGCAT+GGG - Chr2:11478934-11478953 None:intergenic 40.0%
!! AGGCAGTTGGTGATGTTAAA+TGG + Chr2:11478979-11478998 MsG0280007175.01.T01:CDS 40.0%
!! GGCAGTTGGTGATGTTAAAT+GGG + Chr2:11478980-11478999 MsG0280007175.01.T01:CDS 40.0%
ACAATGAATTCCTCGGTGGT+TGG - Chr2:11478505-11478524 None:intergenic 45.0%
ACACAGACGATTAAGGAGCT+TGG + Chr2:11479204-11479223 MsG0280007175.01.T01:CDS 45.0%
ACTGTCCGATTCTACATGGA+TGG + Chr2:11478811-11478830 MsG0280007175.01.T01:CDS 45.0%
ATCTCCCATAAGGGTTCCAT+AGG - Chr2:11478712-11478731 None:intergenic 45.0%
CGATACGGTAACAACTCAAC+AGG - Chr2:11478541-11478560 None:intergenic 45.0%
CGGGTGAGAGATTTGAGAAT+AGG + Chr2:11478356-11478375 MsG0280007175.01.T01:CDS 45.0%
CTTGGCCAAGCACTTGAAAT+GGG - Chr2:11478402-11478421 None:intergenic 45.0%
GGACTGAGCTCTTCATTGTT+GGG + Chr2:11479085-11479104 MsG0280007175.01.T01:CDS 45.0%
GTTAAGTATCCCATCGAAGC+AGG + Chr2:11479120-11479139 MsG0280007175.01.T01:CDS 45.0%
TAGATTGGTGAAGAGGCAGT+TGG + Chr2:11478966-11478985 MsG0280007175.01.T01:CDS 45.0%
TCTTGGCCAAGCACTTGAAA+TGG - Chr2:11478403-11478422 None:intergenic 45.0%
TGGACTGAGCTCTTCATTGT+TGG + Chr2:11479084-11479103 MsG0280007175.01.T01:CDS 45.0%
! GGATGGAATGTGTCATTGGT+GGG + Chr2:11478828-11478847 MsG0280007175.01.T01:CDS 45.0%
! TCACTCCCATTTCAAGTGCT+TGG + Chr2:11478394-11478413 MsG0280007175.01.T01:CDS 45.0%
! TGGATGGAATGTGTCATTGG+TGG + Chr2:11478827-11478846 MsG0280007175.01.T01:CDS 45.0%
!! ACCATTTTTCCCTGCTTCGA+TGG - Chr2:11479133-11479152 None:intergenic 45.0%
!! ATTAAGGAGCTTGGTGTCGA+AGG + Chr2:11479213-11479232 MsG0280007175.01.T01:CDS 45.0%
!! CCATTTTTCCCTGCTTCGAT+GGG - Chr2:11479132-11479151 None:intergenic 45.0%
ATTGTGGAATCCAACCACCG+AGG + Chr2:11478492-11478511 MsG0280007175.01.T01:CDS 50.0%
CCCATCGAAGCAGGGAAAAA+TGG + Chr2:11479129-11479148 MsG0280007175.01.T01:CDS 50.0%
TGCTTGAGCAAGAGGCTTCA+TGG + Chr2:11478677-11478696 MsG0280007175.01.T01:CDS 50.0%
TTGCTAACCTTTCCGGTCGT+CGG - Chr2:11478100-11478119 None:intergenic 50.0%
! TAGGGGCTTGCTTGAGCAAG+AGG + Chr2:11478669-11478688 MsG0280007175.01.T01:CDS 55.0%
CTAACCTTTCCGGTCGTCGG+CGG - Chr2:11478097-11478116 None:intergenic 60.0%
GACGCCGCCGACGACCGGAA+AGG + Chr2:11478090-11478109 MsG0280007175.01.T01:CDS 75.0%
TCTGCGACGCCGCCGACGAC+CGG + Chr2:11478085-11478104 MsG0280007175.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 11478076 11479299 11478076 ID=MsG0280007175.01;Name=MsG0280007175.01
Chr2 mRNA 11478076 11479299 11478076 ID=MsG0280007175.01.T01;Parent=MsG0280007175.01;Name=MsG0280007175.01.T01;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|407
Chr2 exon 11478076 11479299 11478076 ID=MsG0280007175.01.T01:exon:3577;Parent=MsG0280007175.01.T01
Chr2 CDS 11478076 11479299 11478076 ID=MsG0280007175.01.T01:cds;Parent=MsG0280007175.01.T01
Gene Sequence

>MsG0280007175.01.T01

ATGGAGAAATCTGCGACGCCGCCGACGACCGGAAAGGTTAGCAATCACATACCTGATGATGTTGCATTTTCCATTCTATCAAAATTGCCTCTAAAATCTTTGAAGCGATTCGAATCTACGTGTAAATCATGGTCGATGTTATTTCAAAACCCTTATTTCATGAAAATCTACCGGAATCGTATCATATATAGAACACATTCTGAATATGATGATGCAACTCTTATCTTACGGCATACTATTGAGGATGAACACCTATTCCGGTCCACATTGTATTTCATTTCGGGTGAGAGATTTGAGAATAGGGTTAAATTAAATTTGTCACTCCCATTTCAAGTGCTTGGCCAAGATATTTATATTTTGGGTTCTATCAGTATCAATGGCTTTGTTTGTCTTTCTGGTGATGAGAGAAAAGCTGTATTGTGGAATCCAACCACCGAGGAATTCATTGTCATTCCTTCTAGTCCTGTTGAGTTGTTACCGTATCGGAAGTTTGAAGCTTTTATTCATGGGTTTGGTTATGATCACGTTAGGGATGATTATAAGGTGATTCGGTATGTAGAGTTTGATAGCCTATCTTTCTATGATGTTATGTTTAGGGGCTTGCTTGAGCAAGAGGCTTCATGGAAAGATGTACCTATGGAACCCTTATGGGAGATATATAGTCTAAGAAGCAACTCTTGGAAGAAAATTGATGTTGACATGTCTTTGGTGATGTCCCCTGAAACAAAAGAAGAAACTGTCCGATTCTACATGGATGGAATGTGTCATTGGTGGGATAAAATTGAAAAAGATAGTGATGATGGTGGAACATATTTTGTTTCATTTGACGTGACCAATGAGGTGTGTTTTACGACACCCATGCCCTCAGATATTGATGATACTTTTGATATTAGATTGGTGAAGAGGCAGTTGGTGATGTTAAATGGGTCCATTGGTTTGATATCATACAGCGGGGAGACGAATACTCTTCACGTATCAATTTTAGGTGAAATTGGTGTAAAAGAATCGTGGACTGAGCTCTTCATTGTTGGGTCGTTGCCTCATGTTAAGTATCCCATCGAAGCAGGGAAAAATGGTGACATATTCTTCATAAAAAAAGATGGAGAACTAGCTTGTTTTAATTTGGATACACAGACGATTAAGGAGCTTGGTGTCGAAGGAATCATGAGTCAGATAGTAATTTATAAGGAAAGTTTTCATTCAATTAGAAGCATAAATAATTAG

Protein sequence

>MsG0280007175.01.T01

MEKSATPPTTGKVSNHIPDDVAFSILSKLPLKSLKRFESTCKSWSMLFQNPYFMKIYRNRIIYRTHSEYDDATLILRHTIEDEHLFRSTLYFISGERFENRVKLNLSLPFQVLGQDIYILGSISINGFVCLSGDERKAVLWNPTTEEFIVIPSSPVELLPYRKFEAFIHGFGYDHVRDDYKVIRYVEFDSLSFYDVMFRGLLEQEASWKDVPMEPLWEIYSLRSNSWKKIDVDMSLVMSPETKEETVRFYMDGMCHWWDKIEKDSDDGGTYFVSFDVTNEVCFTTPMPSDIDDTFDIRLVKRQLVMLNGSIGLISYSGETNTLHVSILGEIGVKESWTELFIVGSLPHVKYPIEAGKNGDIFFIKKDGELACFNLDTQTIKELGVEGIMSQIVIYKESFHSIRSINN*