AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035079.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035079.01.T01 MTR_0129s0070 52.500 400 173 12 4 392 2 395 3.84e-129 377
MsG0680035079.01.T01 MTR_0129s0120 50.877 399 181 11 4 392 2 395 2.62e-124 365
MsG0680035079.01.T01 MTR_4g117550 47.236 398 174 10 5 393 3 373 6.33e-108 322
MsG0680035079.01.T01 MTR_0129s0050 47.156 422 180 14 1 393 1 408 2.10e-106 320
MsG0680035079.01.T01 MTR_8g063440 47.287 387 189 11 14 394 7 384 2.79e-104 313
MsG0680035079.01.T01 MTR_5g097330 43.921 403 201 10 11 394 8 404 2.55e-103 311
MsG0680035079.01.T01 MTR_0054s0100 45.874 412 195 12 5 394 4 409 2.09e-99 302
MsG0680035079.01.T01 MTR_0054s0090 45.631 412 195 12 5 394 3 407 7.45e-99 300
MsG0680035079.01.T01 MTR_1g007450 46.457 381 183 9 11 376 4 378 3.62e-98 299
MsG0680035079.01.T01 MTR_4g102410 44.118 408 189 12 11 391 53 448 4.28e-98 300
MsG0680035079.01.T01 MTR_2g022000 41.781 438 206 14 5 400 3 433 7.33e-98 299
MsG0680035079.01.T01 MTR_2g021800 42.584 418 205 11 5 392 3 415 1.46e-96 295
MsG0680035079.01.T01 MTR_6g086825 45.865 399 188 11 16 392 67 459 2.21e-96 296
MsG0680035079.01.T01 MTR_6g090180 45.679 405 185 15 11 389 39 434 2.67e-96 295
MsG0680035079.01.T01 MTR_6g079770 43.855 415 197 11 11 394 9 418 3.58e-96 294
MsG0680035079.01.T01 MTR_2g038680 42.926 417 189 14 11 392 8 410 1.88e-95 292
MsG0680035079.01.T01 MTR_2g066170 43.939 396 198 11 11 394 4 387 2.05e-95 291
MsG0680035079.01.T01 MTR_2g066200 43.000 400 198 10 11 394 4 389 5.24e-95 290
MsG0680035079.01.T01 MTR_6g079810 43.914 419 196 11 1 391 54 461 1.47e-94 291
MsG0680035079.01.T01 MTR_2g104340 46.098 410 173 15 11 392 6 395 1.65e-94 289
MsG0680035079.01.T01 MTR_0134s0060 45.060 415 188 13 11 392 4 411 6.76e-94 288
MsG0680035079.01.T01 MTR_4g028510 44.527 402 192 15 13 392 9 401 4.24e-93 287
MsG0680035079.01.T01 MTR_8g012090 45.304 362 146 10 14 362 11 333 8.52e-92 280
MsG0680035079.01.T01 MTR_7g069550 46.032 378 169 17 13 367 8 373 1.85e-91 281
MsG0680035079.01.T01 MTR_6g080680 43.066 411 188 12 1 387 1 389 2.22e-91 281
MsG0680035079.01.T01 MTR_8g467670 43.291 395 202 12 8 395 2 381 6.70e-91 280
MsG0680035079.01.T01 MTR_3g011120 44.865 370 184 10 9 372 3 358 6.73e-91 279
MsG0680035079.01.T01 MTR_2g021950 42.683 410 197 14 1 389 1 393 9.72e-91 279
MsG0680035079.01.T01 MTR_8g039500 44.751 362 170 10 11 362 4 345 2.26e-90 276
MsG0680035079.01.T01 MTR_4g130330 42.105 399 197 11 16 392 4 390 2.81e-90 278
MsG0680035079.01.T01 MTR_5g097220 44.961 387 169 15 12 367 6 379 2.05e-89 276
MsG0680035079.01.T01 MTR_4g028660 42.716 405 203 13 4 389 1 395 2.11e-89 276
MsG0680035079.01.T01 MTR_4g027450 42.716 405 203 13 4 389 1 395 2.11e-89 276
MsG0680035079.01.T01 MTR_8g041270 42.822 411 190 14 13 392 9 405 3.07e-89 276
MsG0680035079.01.T01 MTR_8g464770 44.271 384 188 14 14 387 7 374 3.55e-89 275
MsG0680035079.01.T01 MTR_2g104280 42.439 410 191 11 14 392 9 404 5.94e-89 275
MsG0680035079.01.T01 MTR_5g096630 41.278 407 211 13 13 394 12 415 9.83e-89 275
MsG0680035079.01.T01 MTR_4g028680 42.857 413 202 16 4 394 1 401 1.66e-88 274
MsG0680035079.01.T01 MTR_5g097350 44.051 395 180 17 14 389 11 383 3.79e-88 272
MsG0680035079.01.T01 MTR_7g017040 42.439 410 194 15 9 393 6 398 3.79e-88 273
MsG0680035079.01.T01 MTR_5g069390 41.190 420 204 14 12 401 19 425 1.06e-87 275
MsG0680035079.01.T01 MTR_6g461660 43.544 395 198 12 11 389 11 396 3.22e-87 270
MsG0680035079.01.T01 MTR_7g017130 42.787 409 204 15 1 392 1 396 3.62e-87 270
MsG0680035079.01.T01 MTR_4g055820 45.429 361 165 12 13 350 8 359 3.90e-87 269
MsG0680035079.01.T01 MTR_4g014370 40.095 419 199 14 12 392 4 408 7.13e-87 270
MsG0680035079.01.T01 MTR_0831s0010 42.857 392 193 14 16 393 47 421 1.10e-86 270
MsG0680035079.01.T01 MTR_7g017170 41.805 421 203 15 1 392 1 408 1.17e-85 266
MsG0680035079.01.T01 MTR_8g046310 42.893 394 184 15 11 388 5 373 3.31e-85 265
MsG0680035079.01.T01 MTR_2g065860 40.955 398 205 13 13 394 6 389 8.05e-85 264
MsG0680035079.01.T01 MTR_2g021770 40.482 415 211 14 8 394 2 408 1.99e-84 263
MsG0680035079.01.T01 MTR_5g097680 42.280 421 197 15 13 392 11 426 2.67e-84 264
MsG0680035079.01.T01 MTR_5g059430 40.330 424 191 15 12 391 19 424 4.95e-84 263
MsG0680035079.01.T01 MTR_5g091140 45.600 375 161 14 11 367 40 389 8.63e-84 262
MsG0680035079.01.T01 MTR_1g007410 43.832 381 169 14 14 367 17 379 5.62e-82 257
MsG0680035079.01.T01 MTR_7g079640 42.473 372 170 13 18 373 12 355 1.06e-81 255
MsG0680035079.01.T01 MTR_2g034700 44.772 373 168 14 9 368 3 350 1.67e-81 254
MsG0680035079.01.T01 MTR_5g096910 41.397 401 199 11 11 392 9 392 6.73e-81 254
MsG0680035079.01.T01 MTR_2g066150 41.310 397 181 14 11 394 4 361 9.78e-81 252
MsG0680035079.01.T01 MTR_1g007430 46.440 323 158 9 30 347 7 319 1.14e-80 251
MsG0680035079.01.T01 MTR_5g037680 42.356 399 184 16 14 387 3 380 4.93e-80 253
MsG0680035079.01.T01 MTR_5g072060 43.666 371 160 13 17 367 4 345 1.20e-79 257
MsG0680035079.01.T01 MTR_2g064950 42.607 399 185 18 11 384 2 381 7.48e-79 249
MsG0680035079.01.T01 MTR_8g033140 40.330 424 196 15 13 394 11 419 1.33e-78 249
MsG0680035079.01.T01 MTR_8g046220 39.529 425 188 16 8 388 2 401 3.32e-78 247
MsG0680035079.01.T01 MTR_8g064890 40.355 394 210 11 13 394 9 389 4.87e-77 244
MsG0680035079.01.T01 MTR_2g065840 39.356 404 206 17 11 393 4 389 1.80e-76 242
MsG0680035079.01.T01 MTR_4g028750 40.945 381 196 15 4 366 1 370 1.14e-75 241
MsG0680035079.01.T01 MTR_6g478230 39.952 413 194 14 12 394 20 408 1.88e-75 241
MsG0680035079.01.T01 MTR_8g013000 42.577 357 179 14 11 349 2 350 3.19e-75 239
MsG0680035079.01.T01 MTR_8g046200 40.046 437 185 21 8 388 2 417 7.53e-75 239
MsG0680035079.01.T01 MTR_7g111700 41.000 400 170 11 16 394 12 366 4.07e-74 235
MsG0680035079.01.T01 MTR_5g024260 40.476 420 200 18 1 384 1 406 2.29e-73 235
MsG0680035079.01.T01 MTR_8g032980 39.588 437 191 18 7 390 2 418 3.59e-73 235
MsG0680035079.01.T01 MTR_1g053510 40.686 408 200 15 11 388 6 401 5.39e-73 234
MsG0680035079.01.T01 MTR_8g036970 40.510 353 138 10 25 366 4 295 8.84e-73 232
MsG0680035079.01.T01 MTR_1g050308 38.404 401 172 11 1 394 16 348 6.44e-72 229
MsG0680035079.01.T01 MTR_5g092850 39.259 405 192 18 18 389 15 398 2.70e-71 229
MsG0680035079.01.T01 MTR_8g063330 42.135 356 180 15 13 352 6 351 3.23e-70 229
MsG0680035079.01.T01 MTR_5g074850 40.000 400 182 16 3 366 19 396 7.47e-68 231
MsG0680035079.01.T01 MTR_5g074800 42.416 356 167 17 58 392 1 339 3.72e-67 217
MsG0680035079.01.T01 MTR_8g033090 38.571 420 196 18 16 392 11 411 5.32e-67 218
MsG0680035079.01.T01 MTR_8g018110 38.780 410 205 14 11 392 5 396 5.86e-66 215
MsG0680035079.01.T01 MTR_8g064790 36.504 389 181 9 13 394 9 338 3.23e-65 211
MsG0680035079.01.T01 MTR_7g016930 43.385 325 142 13 13 325 10 304 1.07e-64 210
MsG0680035079.01.T01 MTR_8g033110 39.243 423 203 20 11 392 5 414 1.48e-64 212
MsG0680035079.01.T01 MTR_6g090250 39.440 393 191 13 39 388 31 419 3.99e-64 211
MsG0680035079.01.T01 MTR_1g098180 37.778 405 187 16 6 390 4 363 5.63e-64 209
MsG0680035079.01.T01 MTR_6g078010 40.341 352 169 12 56 388 1 330 6.55e-64 208
MsG0680035079.01.T01 MTR_5g096900 42.988 328 142 12 14 317 7 313 1.17e-62 204
MsG0680035079.01.T01 MTR_5g022850 36.842 399 179 14 14 394 11 354 2.26e-62 204
MsG0680035079.01.T01 MTR_4g014370 36.896 393 165 15 12 392 15 336 3.30e-62 204
MsG0680035079.01.T01 MTR_5g075370 38.325 394 192 16 16 375 5 381 1.09e-60 210
MsG0680035079.01.T01 MTR_5g092860 39.178 365 160 14 38 373 21 352 1.67e-59 197
MsG0680035079.01.T01 MTR_8g063370 37.736 371 199 11 7 367 16 364 2.38e-58 196
MsG0680035079.01.T01 MTR_5g064700 38.298 376 184 15 58 393 1 368 9.69e-58 193
MsG0680035079.01.T01 MTR_4g007940 40.260 308 153 12 91 376 28 326 5.79e-57 190
MsG0680035079.01.T01 MTR_5g086590 45.259 232 111 7 138 366 13 231 8.80e-56 184
MsG0680035079.01.T01 MTR_6g079790 39.185 319 157 9 103 394 2 310 9.82e-56 186
MsG0680035079.01.T01 MTR_2g021920 44.770 239 105 8 172 389 37 269 1.60e-55 184
MsG0680035079.01.T01 MTR_6g070880 42.797 236 118 6 14 234 27 260 8.52e-55 182
MsG0680035079.01.T01 MTR_6g071420 42.797 236 118 6 14 234 27 260 8.52e-55 182
MsG0680035079.01.T01 MTR_5g076490 38.798 366 166 14 56 393 1 336 2.80e-53 181
MsG0680035079.01.T01 MTR_7g104710 39.228 311 139 8 11 306 9 284 3.69e-53 179
MsG0680035079.01.T01 MTR_6g087620 38.699 292 131 8 91 366 1 260 1.86e-50 171
MsG0680035079.01.T01 MTR_8g063310 34.000 400 219 17 8 384 11 388 9.06e-50 173
MsG0680035079.01.T01 MTR_8g033000 34.646 381 188 14 56 393 1 363 1.48e-49 171
MsG0680035079.01.T01 MTR_5g068490 39.073 302 146 13 100 394 8 278 1.78e-49 169
MsG0680035079.01.T01 MTR_1g050312 38.961 308 143 13 83 380 9 281 5.71e-49 167
MsG0680035079.01.T01 MTR_8g063350 33.952 377 173 11 7 367 2 318 6.88e-48 166
MsG0680035079.01.T01 MTR_7g023800 34.294 347 167 10 58 386 1 304 2.83e-47 164
MsG0680035079.01.T01 MTR_6g004450 40.234 256 132 7 150 395 27 271 2.97e-47 162
MsG0680035079.01.T01 MTR_1g076810 41.667 252 128 10 1 244 1 241 3.14e-47 171
MsG0680035079.01.T01 MTR_5g097820 39.922 258 131 7 4 249 8 253 1.34e-46 161
MsG0680035079.01.T01 MTR_5g094350 40.502 279 132 11 15 274 9 272 2.47e-45 158
MsG0680035079.01.T01 MTR_6g465360 42.259 239 111 8 5 221 48 281 5.60e-45 157
MsG0680035079.01.T01 MTR_5g097850 47.619 189 82 5 218 394 63 246 5.95e-45 156
MsG0680035079.01.T01 MTR_5g043605 32.512 406 184 14 2 392 8 338 8.44e-45 159
MsG0680035079.01.T01 MTR_8g073570 48.851 174 81 6 11 182 2 169 6.02e-44 150
MsG0680035079.01.T01 MTR_5g098950 43.256 215 84 5 140 349 90 271 7.87e-44 154
MsG0680035079.01.T01 MTR_5g023970 42.786 201 103 7 201 394 2 197 6.67e-43 149
MsG0680035079.01.T01 MTR_4g016000 43.961 207 93 8 143 344 2 190 2.65e-42 148
MsG0680035079.01.T01 MTR_2g104260 39.130 276 139 10 13 267 8 275 3.35e-42 149
MsG0680035079.01.T01 MTR_7g019250 43.636 220 106 6 152 368 206 410 5.18e-41 151
MsG0680035079.01.T01 MTR_6g090260 45.604 182 87 4 193 367 59 235 1.54e-40 145
MsG0680035079.01.T01 MTR_6g090260 57.971 69 28 1 1 68 1 69 6.03e-15 74.7
MsG0680035079.01.T01 MTR_8g035690 39.777 269 117 12 161 392 42 302 2.99e-40 145
MsG0680035079.01.T01 MTR_6g009350 41.709 199 92 6 172 357 8 195 1.04e-38 138
MsG0680035079.01.T01 MTR_5g037190 36.194 268 127 10 13 263 10 250 3.98e-37 135
MsG0680035079.01.T01 MTR_3g018750 37.805 246 122 9 171 392 2 240 1.88e-35 130
MsG0680035079.01.T01 MTR_1g115205 38.000 250 109 8 12 250 22 236 5.36e-35 130
MsG0680035079.01.T01 MTR_5g066420 48.485 132 65 3 253 382 19 149 1.56e-32 120
MsG0680035079.01.T01 MTR_5g096920 44.737 152 77 5 244 391 2 150 7.83e-30 113
MsG0680035079.01.T01 MTR_7g101200 35.683 227 101 11 136 351 36 228 7.63e-29 113
MsG0680035079.01.T01 MTR_5g096070 44.253 174 59 7 12 180 19 159 2.01e-28 109
MsG0680035079.01.T01 MTR_6g079730 46.667 135 68 3 256 388 13 145 2.64e-27 106
MsG0680035079.01.T01 MTR_3g030620 41.975 162 81 6 241 391 21 180 1.06e-26 105
MsG0680035079.01.T01 MTR_3g019290 37.864 206 88 8 16 219 11 178 4.28e-26 103
MsG0680035079.01.T01 MTR_7g017150 38.974 195 104 7 208 392 77 266 6.65e-26 105
MsG0680035079.01.T01 MTR_5g097540 43.165 139 72 4 213 349 97 230 2.06e-25 105
MsG0680035079.01.T01 MTR_5g097660 50.000 114 54 3 278 389 4 116 2.21e-25 100
MsG0680035079.01.T01 MTR_7g017120 39.487 195 103 8 208 392 76 265 2.29e-25 104
MsG0680035079.01.T01 MTR_5g091150 33.333 222 84 9 103 299 2 184 4.98e-24 99.0
MsG0680035079.01.T01 MTR_5g097650 41.509 159 69 6 11 161 13 155 6.99e-24 97.4
MsG0680035079.01.T01 MTR_5g036250 48.980 98 50 0 303 400 21 118 7.23e-23 95.5
MsG0680035079.01.T01 MTR_2g022020 41.525 118 67 2 272 389 1 116 8.52e-23 92.8
MsG0680035079.01.T01 MTR_4g021785 27.114 402 206 18 18 391 8 350 1.72e-22 98.2
MsG0680035079.01.T01 MTR_5g086780 46.296 108 54 2 259 366 121 224 2.97e-22 94.7
MsG0680035079.01.T01 MTR_5g086780 55.696 79 30 2 5 83 3 76 2.69e-14 72.4
MsG0680035079.01.T01 MTR_3g034160 27.833 406 228 19 13 391 3 370 6.65e-22 96.7
MsG0680035079.01.T01 MTR_3g047580 39.597 149 61 5 9 152 3 127 9.70e-22 90.5
MsG0680035079.01.T01 MTR_2g021150 27.887 355 211 16 19 361 14 335 1.24e-21 95.9
MsG0680035079.01.T01 MTR_5g096050 44.037 109 45 2 244 337 2 109 2.67e-21 89.0
MsG0680035079.01.T01 MTR_2g028130 24.719 356 205 11 15 339 1 324 3.00e-21 95.1
MsG0680035079.01.T01 MTR_4g023090 26.536 407 234 18 13 391 10 379 3.90e-21 94.7
MsG0680035079.01.T01 MTR_1g047080 28.490 351 168 15 56 392 1 282 4.57e-21 92.8
MsG0680035079.01.T01 MTR_4g116330 26.329 395 239 16 13 391 17 375 5.13e-21 94.4
MsG0680035079.01.T01 MTR_4g094365 28.649 370 202 20 18 367 7 334 6.69e-21 93.6
MsG0680035079.01.T01 MTR_0129s0110 60.000 75 13 1 79 153 3 60 1.63e-20 86.7
MsG0680035079.01.T01 MTR_4g023080 27.318 399 218 18 13 391 3 349 4.06e-20 91.3
MsG0680035079.01.T01 MTR_3g034180 27.160 405 232 20 13 391 117 484 6.71e-20 91.7
MsG0680035079.01.T01 MTR_2g028140 24.854 342 209 13 15 329 1 321 1.29e-19 90.5
MsG0680035079.01.T01 MTR_0667s0010 26.061 330 204 12 15 329 2 306 2.45e-19 89.7
MsG0680035079.01.T01 MTR_3g034130 26.263 396 233 19 14 385 4 364 5.08e-19 88.2
MsG0680035079.01.T01 MTR_2g031720 24.462 372 224 17 19 367 6 343 8.36e-19 87.8
MsG0680035079.01.T01 MTR_2g028110 23.836 365 231 15 19 367 4 337 1.41e-18 87.0
MsG0680035079.01.T01 MTR_8g041440 44.144 111 37 3 11 114 7 99 2.32e-18 80.9
MsG0680035079.01.T01 MTR_1g094210 25.545 321 184 14 19 329 57 332 4.48e-18 85.9
MsG0680035079.01.T01 MTR_1g094210 25.857 321 183 14 19 329 57 332 4.65e-18 85.9
MsG0680035079.01.T01 MTR_4g023070 26.119 402 229 19 19 391 3 365 5.23e-18 85.1
MsG0680035079.01.T01 MTR_1g054725 26.462 325 195 12 17 329 18 310 9.32e-18 84.7
MsG0680035079.01.T01 MTR_4g023130 25.445 393 192 15 13 391 3 308 3.84e-17 82.0
MsG0680035079.01.T01 MTR_4g023120 26.119 402 229 19 19 391 3 365 5.86e-17 82.0
MsG0680035079.01.T01 MTR_0115s0020 24.934 377 214 14 18 357 9 353 6.47e-17 82.4
MsG0680035079.01.T01 MTR_4g023150 27.182 401 221 21 13 391 4 355 7.24e-17 81.6
MsG0680035079.01.T01 MTR_1g097560 23.773 387 250 13 9 388 26 374 3.00e-16 80.1
MsG0680035079.01.T01 MTR_2g028160 23.547 344 207 14 15 329 1 317 3.66e-16 80.1
MsG0680035079.01.T01 MTR_4g116330 25.954 393 204 18 13 391 17 336 3.76e-16 79.3
MsG0680035079.01.T01 MTR_1g050305 54.118 85 33 3 296 375 23 106 3.95e-16 75.5
MsG0680035079.01.T01 MTR_4g117850 27.128 376 202 19 18 368 22 350 4.11e-16 79.7
MsG0680035079.01.T01 MTR_3g103020 25.990 404 220 21 18 391 19 373 4.57e-16 79.7
MsG0680035079.01.T01 MTR_1g055135 26.131 398 223 16 18 387 12 366 6.72e-16 79.0
MsG0680035079.01.T01 MTR_4g117780 26.027 365 220 12 19 369 11 339 8.02e-16 78.6
MsG0680035079.01.T01 MTR_3g014540 24.507 355 228 14 19 366 29 350 1.17e-15 78.2
MsG0680035079.01.T01 MTR_2g025420 25.141 354 204 13 19 339 6 331 2.08e-15 77.8
MsG0680035079.01.T01 MTR_3g010590 24.841 314 191 12 19 329 39 310 2.16e-15 77.4
MsG0680035079.01.T01 MTR_4g109280 28.804 368 207 16 17 370 6 332 4.15e-15 76.6
MsG0680035079.01.T01 MTR_7g070440 27.419 372 213 19 19 364 7 347 5.58e-15 76.3
MsG0680035079.01.T01 MTR_2g078900 24.765 319 194 12 19 329 33 313 6.13e-15 75.9
MsG0680035079.01.T01 MTR_2g426020 22.796 329 217 9 15 329 2 307 6.42e-15 76.3
MsG0680035079.01.T01 MTR_2g021155 26.197 355 220 13 22 369 39 358 6.91e-15 77.0
MsG0680035079.01.T01 MTR_2g426090 25.538 325 192 14 27 329 14 310 9.99e-15 75.9
MsG0680035079.01.T01 MTR_3g013740 26.346 353 190 18 6 329 31 342 1.00e-14 75.9
MsG0680035079.01.T01 MTR_1g068875 22.493 369 236 14 19 372 4 337 1.34e-14 75.1
MsG0680035079.01.T01 MTR_0064s0160 24.433 397 261 13 18 390 41 422 1.76e-14 75.1
MsG0680035079.01.T01 MTR_6g053260 26.531 343 194 19 5 329 322 624 4.61e-14 74.3
MsG0680035079.01.T01 MTR_2g029990 25.532 329 184 16 20 329 52 338 4.89e-14 73.6
MsG0680035079.01.T01 MTR_4g094400 40.000 105 44 3 241 327 8 111 8.71e-14 68.2
MsG0680035079.01.T01 MTR_3g030250 24.854 342 209 11 19 357 37 333 8.83e-14 72.8
MsG0680035079.01.T01 MTR_4g117770 27.105 380 199 16 18 369 10 339 9.68e-14 72.4
MsG0680035079.01.T01 MTR_4g117810 27.105 380 199 16 18 369 10 339 9.68e-14 72.4
MsG0680035079.01.T01 MTR_3g023930 25.074 339 203 12 19 357 34 321 1.57e-13 72.0
MsG0680035079.01.T01 MTR_3g013770 25.749 334 182 15 19 329 33 323 1.89e-13 71.6
MsG0680035079.01.T01 MTR_4g023200 26.509 381 209 21 33 391 24 355 2.05e-13 71.2
MsG0680035079.01.T01 MTR_3g006670 24.852 338 212 12 1 329 32 336 2.79e-13 71.2
MsG0680035079.01.T01 MTR_5g011200 26.667 330 182 18 19 329 17 305 3.05e-13 70.9
MsG0680035079.01.T01 MTR_2g031680 23.720 371 227 18 15 366 2 335 3.99e-13 70.9
MsG0680035079.01.T01 MTR_3g014570 23.511 319 206 11 19 330 29 316 4.55e-13 70.5
MsG0680035079.01.T01 MTR_4g117750 28.030 396 214 18 19 389 3 352 6.17e-13 70.5
MsG0680035079.01.T01 MTR_3g097190 55.556 54 24 0 314 367 28 81 6.20e-13 67.4
MsG0680035079.01.T01 MTR_3g006530 23.362 351 224 16 19 359 40 355 6.55e-13 70.1
MsG0680035079.01.T01 MTR_2g055970 24.719 356 214 16 11 354 203 516 6.85e-13 70.5
MsG0680035079.01.T01 MTR_4g109270 24.297 391 239 18 19 391 8 359 9.40e-13 69.3
MsG0680035079.01.T01 MTR_8g102520 28.352 261 151 10 141 387 75 313 1.44e-12 68.6
MsG0680035079.01.T01 MTR_6g060650 27.778 378 230 15 13 374 2 352 1.46e-12 68.9
MsG0680035079.01.T01 MTR_2g046920 25.298 336 181 16 19 333 24 310 1.97e-12 68.6
MsG0680035079.01.T01 MTR_1g023400 23.978 367 224 14 22 371 6 334 2.32e-12 68.2
MsG0680035079.01.T01 MTR_3g030240 23.718 312 194 12 19 329 40 308 6.47e-12 67.0
MsG0680035079.01.T01 MTR_7g056710 23.018 391 184 17 18 355 22 348 8.63e-12 66.6
MsG0680035079.01.T01 MTR_5g070088 24.460 417 238 17 14 391 2 380 1.10e-11 66.2
MsG0680035079.01.T01 MTR_3g047540 43.077 65 35 1 211 273 4 68 1.14e-11 60.8
MsG0680035079.01.T01 MTR_5g094360 41.860 86 46 3 148 231 40 123 1.41e-11 62.8
MsG0680035079.01.T01 MTR_6g053240 24.224 322 204 13 19 329 28 320 1.43e-11 65.9
MsG0680035079.01.T01 MTR_4g024890 21.823 417 218 16 20 385 11 370 1.62e-11 65.9
MsG0680035079.01.T01 MTR_4g030090 23.464 358 193 12 20 339 15 329 1.71e-11 65.9
MsG0680035079.01.T01 MTR_5g097730 51.923 52 25 0 303 354 2 53 1.87e-11 59.7
MsG0680035079.01.T01 MTR_5g049560 32.237 152 78 6 56 187 1 147 2.26e-11 64.3
MsG0680035079.01.T01 MTR_8g099460 24.620 329 198 15 19 329 5 301 2.45e-11 65.5
MsG0680035079.01.T01 MTR_4g116340 27.897 233 124 9 22 249 39 232 2.85e-11 63.5
MsG0680035079.01.T01 MTR_3g010520 22.438 361 226 11 1 357 3 313 3.38e-11 64.7
MsG0680035079.01.T01 MTR_2g026010 25.444 338 183 16 18 329 3 297 4.27e-11 64.7
MsG0680035079.01.T01 MTR_6g087660 46.154 91 41 3 1 84 1 90 4.81e-11 62.0
MsG0680035079.01.T01 MTR_3g058440 26.117 291 172 14 19 290 35 301 5.29e-11 63.5
MsG0680035079.01.T01 MTR_7g062060 23.988 346 205 12 19 330 12 333 5.86e-11 64.3
MsG0680035079.01.T01 MTR_0760s0010 24.351 308 180 11 27 325 55 318 7.57e-11 63.9
MsG0680035079.01.T01 MTR_8g041490 33.333 129 51 4 9 130 5 105 7.73e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035079.01.T01 AT3G16210 25.237 317 181 12 15 326 1 266 3.05e-15 77.0
MsG0680035079.01.T01 AT3G06240 22.886 402 223 15 19 371 36 399 3.20e-13 71.2
MsG0680035079.01.T01 AT2G16810 27.206 272 163 12 15 278 37 281 4.07e-12 67.0
MsG0680035079.01.T01 AT3G10240 26.774 310 170 16 19 308 27 299 2.42e-11 65.5
MsG0680035079.01.T01 AT2G40920 26.838 272 154 12 22 277 57 299 3.12e-11 65.1
MsG0680035079.01.T01 AT4G19930 29.323 266 145 15 18 265 42 282 4.21e-11 64.7
MsG0680035079.01.T01 AT2G40920 26.766 269 152 12 25 277 1 240 9.39e-11 63.5

Find 84 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATATGTGCATGATTATTT+TGG 0.163226 6:-98577571 MsG0680035079.01.T01:CDS
TAATGAAGGTTTATATATAT+TGG 0.225280 6:-98578052 MsG0680035079.01.T01:CDS
TAATACCGAAAATTACAATT+TGG 0.246596 6:-98577987 MsG0680035079.01.T01:CDS
CGGTACATGTTCATGAAATA+AGG 0.266070 6:+98578234 None:intergenic
TCACTTTCAAAATCAGTTAG+AGG 0.294003 6:+98577811 None:intergenic
AGATCCTTGGACGGCTAAAA+AGG 0.312181 6:-98578370 MsG0680035079.01.T01:CDS
AAACCTTCATTATCTTGAAT+TGG 0.325770 6:+98578063 None:intergenic
GATTGTGTTGACTATCCTAT+TGG 0.348014 6:-98577394 MsG0680035079.01.T01:CDS
CCTATTGGAGGAGGGAATAA+AGG 0.355501 6:-98577379 MsG0680035079.01.T01:CDS
TGGCGAGAAATTCGAGAATA+AGG 0.358195 6:-98578106 MsG0680035079.01.T01:CDS
AATCGAATCAAAGATTTAAG+AGG 0.360839 6:+98578297 None:intergenic
GGCGGGGACTCGAGAGGACT+TGG 0.372792 6:+98577931 None:intergenic
CCTTTATTCCCTCCTCCAAT+AGG 0.374347 6:+98577379 None:intergenic
AAAATAATCATGCACATATG+AGG 0.376826 6:+98577573 None:intergenic
CTACATGTTGAATTACCTTA+AGG 0.396458 6:+98577845 None:intergenic
CCTTCATTATCTTGAATTGG+AGG 0.401203 6:+98578066 None:intergenic
TGGACTAAACTCTTTGTTGT+TGG 0.407257 6:-98577424 MsG0680035079.01.T01:CDS
AGAATAAGGTCAAATTAGAT+TGG 0.411158 6:-98578092 MsG0680035079.01.T01:CDS
TATATCAAATGATGGAGAAC+TGG 0.423083 6:-98577344 MsG0680035079.01.T01:CDS
CCTACCGGCTATTATCCTTC+AGG 0.433833 6:-98577700 MsG0680035079.01.T01:CDS
TCATAAGGAAGTCCTTCTTC+CGG 0.454682 6:-98577248 MsG0680035079.01.T01:CDS
GGTACATGTTCATGAAATAA+GGG 0.455150 6:+98578235 None:intergenic
TATTACGATACTCCTTCATA+AGG 0.465533 6:-98577263 MsG0680035079.01.T01:CDS
GGGGACTCGAGAGGACTTGG+AGG 0.470344 6:+98577934 None:intergenic
GGCTATTATCCTTCAGGTAT+CGG 0.475576 6:-98577694 MsG0680035079.01.T01:CDS
AATTGAAATCGACAGATCCT+TGG 0.476621 6:-98578383 MsG0680035079.01.T01:CDS
ATGGAGAACGTAAAATCATC+AGG 0.481467 6:+98578333 None:intergenic
TTATTCCTCCAACCGGAAGA+AGG 0.483635 6:+98577236 None:intergenic
CCTTAAGGTCATTTCTAACA+TGG 0.484592 6:+98577860 None:intergenic
ATATTCTTTATATCAAATGA+TGG 0.485006 6:-98577352 MsG0680035079.01.T01:CDS
CACTTTCATAAGAAGGTGGC+GGG 0.489349 6:+98577914 None:intergenic
GGATAGTCAACACAATCTAA+TGG 0.489413 6:+98577400 None:intergenic
CAAATGATGGAGAACTGGTT+CGG 0.490236 6:-98577339 MsG0680035079.01.T01:CDS
CCTCCAATTCAAGATAATGA+AGG 0.493404 6:-98578066 MsG0680035079.01.T01:CDS
ATCATGCACATATGAGGGTA+GGG 0.494550 6:+98577579 None:intergenic
CGTAACTACCAAGGAATTCA+AGG 0.496567 6:-98577962 MsG0680035079.01.T01:CDS
CCATGTTAGAAATGACCTTA+AGG 0.497271 6:-98577860 MsG0680035079.01.T01:CDS
AACATAACACTTTCATAAGA+AGG 0.498338 6:+98577907 None:intergenic
AGGAAGGACCTTGAATTCCT+TGG 0.499731 6:+98577954 None:intergenic
GGTATCGGAATACACACAAA+TGG 0.507705 6:-98577679 MsG0680035079.01.T01:CDS
TTAAATGTGTACGTAAATCA+TGG 0.518948 6:-98578275 MsG0680035079.01.T01:CDS
AACTCGGTGTGAAAGAATCA+TGG 0.523056 6:-98577444 MsG0680035079.01.T01:CDS
GAAGTCCTTCTTCCGGTTGG+AGG 0.524224 6:-98577241 MsG0680035079.01.T01:CDS
ACACAAATGGAGTGTGTCAT+TGG 0.525343 6:-98577666 MsG0680035079.01.T01:CDS
ATCAGTTAGAGGCATACAAT+GGG 0.526587 6:+98577822 None:intergenic
TGTGTTGACTATCCTATTGG+AGG 0.532088 6:-98577391 MsG0680035079.01.T01:CDS
GGATGGATTTGATGATTGCA+TGG 0.537721 6:-98577641 MsG0680035079.01.T01:CDS
AAGGAAGTCCTTCTTCCGGT+TGG 0.538367 6:-98577244 MsG0680035079.01.T01:CDS
TCATTATCTTGAATTGGAGG+TGG 0.539264 6:+98578069 None:intergenic
TGTATTGGTGGATAGACGAT+TGG 0.547265 6:-98577545 MsG0680035079.01.T01:CDS
AATCATGCACATATGAGGGT+AGG 0.548656 6:+98577578 None:intergenic
GTTGACTATCCTATTGGAGG+AGG 0.550265 6:-98577388 MsG0680035079.01.T01:CDS
ACTCGAGAGGACTTGGAGGA+AGG 0.556210 6:+98577938 None:intergenic
GGCACTATTTGTTTCTACCA+AGG 0.558987 6:-98578015 MsG0680035079.01.T01:CDS
GTGTGTATTCCGATACCTGA+AGG 0.563897 6:+98577685 None:intergenic
GGAGTGTGTCATTGGTGGGA+TGG 0.567100 6:-98577658 MsG0680035079.01.T01:CDS
ACAGCTTAAGAAGTAACTCA+TGG 0.568819 6:-98577744 MsG0680035079.01.T01:CDS
AATCAGTTAGAGGCATACAA+TGG 0.573460 6:+98577821 None:intergenic
ATAGCTTGAGATAAAAGCAA+CGG 0.585165 6:+98577507 None:intergenic
ACACTTTCATAAGAAGGTGG+CGG 0.586857 6:+98577913 None:intergenic
AAATAATCATGCACATATGA+GGG 0.592977 6:+98577574 None:intergenic
GAAGAAGGACTTCCTTATGA+AGG 0.603700 6:+98577251 None:intergenic
GAAGGTGGCGGGGACTCGAG+AGG 0.611417 6:+98577925 None:intergenic
TGTTCTACAGAATATATCGC+TGG 0.613426 6:+98577603 None:intergenic
ATATTGGATTATGTTGCTGA+TGG 0.614293 6:-98578036 MsG0680035079.01.T01:CDS
GATACCTGAAGGATAATAGC+CGG 0.614619 6:+98577696 None:intergenic
CAGCTTAAGAAGTAACTCAT+GGG 0.615448 6:-98577743 MsG0680035079.01.T01:CDS
TCATGCACATATGAGGGTAG+GGG 0.621503 6:+98577580 None:intergenic
CAAATGGAGTGTGTCATTGG+TGG 0.626602 6:-98577663 MsG0680035079.01.T01:CDS
CTTGATGTAGATATACCTAC+CGG 0.629736 6:-98577715 MsG0680035079.01.T01:CDS
TTGACTATCCTATTGGAGGA+GGG 0.632446 6:-98577387 MsG0680035079.01.T01:CDS
AAATGGAGTGTGTCATTGGT+GGG 0.648608 6:-98577662 MsG0680035079.01.T01:CDS
CCTGAAGGATAATAGCCGGT+AGG 0.654322 6:+98577700 None:intergenic
TATTAGATGCAAAATTGAGG+CGG 0.657699 6:+98578214 None:intergenic
TACCACCACATGACTCCATG+TGG 0.658383 6:-98577774 MsG0680035079.01.T01:CDS
ACCTCCCACATGGAGTCATG+TGG 0.659915 6:+98577769 None:intergenic
ATAACACTTTCATAAGAAGG+TGG 0.660903 6:+98577910 None:intergenic
TCCCACATGGAGTCATGTGG+TGG 0.661179 6:+98577772 None:intergenic
AATTTGGAACGTAACTACCA+AGG 0.667394 6:-98577971 MsG0680035079.01.T01:CDS
GAAATCGACAGATCCTTGGA+CGG 0.673531 6:-98578379 MsG0680035079.01.T01:CDS
ACCACCACATGACTCCATGT+GGG 0.677409 6:-98577773 MsG0680035079.01.T01:CDS
ACCACATGACTCCATGTGGG+AGG 0.683230 6:-98577770 MsG0680035079.01.T01:CDS
ACTTTCATAAGAAGGTGGCG+GGG 0.686093 6:+98577915 None:intergenic
TAAGCTGTATACCTCCCACA+TGG 0.711141 6:+98577759 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTCTTTATATCAAATGA+TGG - Chr6:98578242-98578261 MsG0680035079.01.T01:CDS 15.0%
!! TAATAAAAATTACTCTTATG+TGG - Chr6:98577398-98577417 MsG0680035079.01.T01:CDS 15.0%
!! TAATGAAGGTTTATATATAT+TGG - Chr6:98577542-98577561 MsG0680035079.01.T01:CDS 15.0%
!! TAATACCGAAAATTACAATT+TGG - Chr6:98577607-98577626 MsG0680035079.01.T01:CDS 20.0%
!!! AGTTTTCACATATCAATTTT+AGG - Chr6:98578125-98578144 MsG0680035079.01.T01:CDS 20.0%
!!! TGATTATTTTGGTTTTGTAT+TGG - Chr6:98578034-98578053 MsG0680035079.01.T01:CDS 20.0%
!!! TTTTATTAGATGCAAAATTG+AGG + Chr6:98577386-98577405 None:intergenic 20.0%
! AAAATAATCATGCACATATG+AGG + Chr6:98578024-98578043 None:intergenic 25.0%
! AAACCTTCATTATCTTGAAT+TGG + Chr6:98577534-98577553 None:intergenic 25.0%
! AAATAATCATGCACATATGA+GGG + Chr6:98578023-98578042 None:intergenic 25.0%
! AACATAACACTTTCATAAGA+AGG + Chr6:98577690-98577709 None:intergenic 25.0%
! AATCGAATCAAAGATTTAAG+AGG + Chr6:98577300-98577319 None:intergenic 25.0%
! AGAATAAGGTCAAATTAGAT+TGG - Chr6:98577502-98577521 MsG0680035079.01.T01:CDS 25.0%
! TTAAATGTGTACGTAAATCA+TGG - Chr6:98577319-98577338 MsG0680035079.01.T01:CDS 25.0%
!! ACGTTCCAAATTGTAATTTT+CGG + Chr6:98577615-98577634 None:intergenic 25.0%
!! TCATATGTGCATGATTATTT+TGG - Chr6:98578023-98578042 MsG0680035079.01.T01:CDS 25.0%
!!! ATATCAATTTTAGGTGAACT+CGG - Chr6:98578134-98578153 MsG0680035079.01.T01:CDS 25.0%
!!! TTATTTTGGTTTTGTATTGG+TGG - Chr6:98578037-98578056 MsG0680035079.01.T01:CDS 25.0%
ATAACACTTTCATAAGAAGG+TGG + Chr6:98577687-98577706 None:intergenic 30.0%
ATAGCTTGAGATAAAAGCAA+CGG + Chr6:98578090-98578109 None:intergenic 30.0%
ATATTGGATTATGTTGCTGA+TGG - Chr6:98577558-98577577 MsG0680035079.01.T01:CDS 30.0%
CTACATGTTGAATTACCTTA+AGG + Chr6:98577752-98577771 None:intergenic 30.0%
GGTACATGTTCATGAAATAA+GGG + Chr6:98577362-98577381 None:intergenic 30.0%
TATTACGATACTCCTTCATA+AGG - Chr6:98578331-98578350 MsG0680035079.01.T01:CDS 30.0%
TATTAGATGCAAAATTGAGG+CGG + Chr6:98577383-98577402 None:intergenic 30.0%
TCACTTTCAAAATCAGTTAG+AGG + Chr6:98577786-98577805 None:intergenic 30.0%
! AGTGTTATGTTTTCACTTCA+TGG - Chr6:98577699-98577718 MsG0680035079.01.T01:CDS 30.0%
! ATGTTTTCACTTCATGGATT+TGG - Chr6:98577705-98577724 MsG0680035079.01.T01:CDS 30.0%
! TATATCAAATGATGGAGAAC+TGG - Chr6:98578250-98578269 MsG0680035079.01.T01:CDS 30.0%
! TTTTCGGTATTATCAAACCT+TGG + Chr6:98577599-98577618 None:intergenic 30.0%
!! AAGAGGCAATTTTGATAGAA+TGG + Chr6:98577283-98577302 None:intergenic 30.0%
AATTGAAATCGACAGATCCT+TGG - Chr6:98577211-98577230 MsG0680035079.01.T01:CDS 35.0%
ACAGCTTAAGAAGTAACTCA+TGG - Chr6:98577850-98577869 MsG0680035079.01.T01:CDS 35.0%
ATGGAGAACGTAAAATCATC+AGG + Chr6:98577264-98577283 None:intergenic 35.0%
CAGCTTAAGAAGTAACTCAT+GGG - Chr6:98577851-98577870 MsG0680035079.01.T01:CDS 35.0%
CCATGTTAGAAATGACCTTA+AGG - Chr6:98577734-98577753 MsG0680035079.01.T01:CDS 35.0%
CCTCCAATTCAAGATAATGA+AGG - Chr6:98577528-98577547 MsG0680035079.01.T01:CDS 35.0%
CCTTAAGGTCATTTCTAACA+TGG + Chr6:98577737-98577756 None:intergenic 35.0%
CCTTCATTATCTTGAATTGG+AGG + Chr6:98577531-98577550 None:intergenic 35.0%
CGGTACATGTTCATGAAATA+AGG + Chr6:98577363-98577382 None:intergenic 35.0%
CTTGATGTAGATATACCTAC+CGG - Chr6:98577879-98577898 MsG0680035079.01.T01:CDS 35.0%
GGATAGTCAACACAATCTAA+TGG + Chr6:98578197-98578216 None:intergenic 35.0%
TCATTATCTTGAATTGGAGG+TGG + Chr6:98577528-98577547 None:intergenic 35.0%
TGTTCTACAGAATATATCGC+TGG + Chr6:98577994-98578013 None:intergenic 35.0%
! AATCAGTTAGAGGCATACAA+TGG + Chr6:98577776-98577795 None:intergenic 35.0%
! AATTTGGAACGTAACTACCA+AGG - Chr6:98577623-98577642 MsG0680035079.01.T01:CDS 35.0%
! ATCAGTTAGAGGCATACAAT+GGG + Chr6:98577775-98577794 None:intergenic 35.0%
! TGGACTAAACTCTTTGTTGT+TGG - Chr6:98578170-98578189 MsG0680035079.01.T01:CDS 35.0%
!! ACACTTTTTATTCCTCCAAC+CGG + Chr6:98578368-98578387 None:intergenic 35.0%
!! GATTGTGTTGACTATCCTAT+TGG - Chr6:98578200-98578219 MsG0680035079.01.T01:CDS 35.0%
AATCATGCACATATGAGGGT+AGG + Chr6:98578019-98578038 None:intergenic 40.0%
ACACAAATGGAGTGTGTCAT+TGG - Chr6:98577928-98577947 MsG0680035079.01.T01:CDS 40.0%
ACACTTTCATAAGAAGGTGG+CGG + Chr6:98577684-98577703 None:intergenic 40.0%
ATCATGCACATATGAGGGTA+GGG + Chr6:98578018-98578037 None:intergenic 40.0%
CGTAACTACCAAGGAATTCA+AGG - Chr6:98577632-98577651 MsG0680035079.01.T01:CDS 40.0%
GAAGAAGGACTTCCTTATGA+AGG + Chr6:98578346-98578365 None:intergenic 40.0%
GATACCTGAAGGATAATAGC+CGG + Chr6:98577901-98577920 None:intergenic 40.0%
GGCTATTATCCTTCAGGTAT+CGG - Chr6:98577900-98577919 MsG0680035079.01.T01:CDS 40.0%
TCATAAGGAAGTCCTTCTTC+CGG - Chr6:98578346-98578365 MsG0680035079.01.T01:CDS 40.0%
TGGCGAGAAATTCGAGAATA+AGG - Chr6:98577488-98577507 MsG0680035079.01.T01:CDS 40.0%
TTGACTATCCTATTGGAGGA+GGG - Chr6:98578207-98578226 MsG0680035079.01.T01:CDS 40.0%
! AAATGGAGTGTGTCATTGGT+GGG - Chr6:98577932-98577951 MsG0680035079.01.T01:CDS 40.0%
! CAAATGATGGAGAACTGGTT+CGG - Chr6:98578255-98578274 MsG0680035079.01.T01:CDS 40.0%
! GATGCGATGTTTTCTCTTTC+TGG - Chr6:98577468-98577487 MsG0680035079.01.T01:CDS 40.0%
! GGATGGATTTGATGATTGCA+TGG - Chr6:98577953-98577972 MsG0680035079.01.T01:CDS 40.0%
! GGTATCGGAATACACACAAA+TGG - Chr6:98577915-98577934 MsG0680035079.01.T01:CDS 40.0%
! TGTATTGGTGGATAGACGAT+TGG - Chr6:98578049-98578068 MsG0680035079.01.T01:CDS 40.0%
!! AACTCGGTGTGAAAGAATCA+TGG - Chr6:98578150-98578169 MsG0680035079.01.T01:CDS 40.0%
!! GGCACTATTTGTTTCTACCA+AGG - Chr6:98577579-98577598 MsG0680035079.01.T01:CDS 40.0%
!! TGTGTTGACTATCCTATTGG+AGG - Chr6:98578203-98578222 MsG0680035079.01.T01:CDS 40.0%
ACTTTCATAAGAAGGTGGCG+GGG + Chr6:98577682-98577701 None:intergenic 45.0%
AGATCCTTGGACGGCTAAAA+AGG - Chr6:98577224-98577243 MsG0680035079.01.T01:CDS 45.0%
AGGAAGGACCTTGAATTCCT+TGG + Chr6:98577643-98577662 None:intergenic 45.0%
CACTTTCATAAGAAGGTGGC+GGG + Chr6:98577683-98577702 None:intergenic 45.0%
CCTATTGGAGGAGGGAATAA+AGG - Chr6:98578215-98578234 MsG0680035079.01.T01:CDS 45.0%
CCTTTATTCCCTCCTCCAAT+AGG + Chr6:98578218-98578237 None:intergenic 45.0%
GAAATCGACAGATCCTTGGA+CGG - Chr6:98577215-98577234 MsG0680035079.01.T01:CDS 45.0%
GTGTGTATTCCGATACCTGA+AGG + Chr6:98577912-98577931 None:intergenic 45.0%
GTTGACTATCCTATTGGAGG+AGG - Chr6:98578206-98578225 MsG0680035079.01.T01:CDS 45.0%
TAAGCTGTATACCTCCCACA+TGG + Chr6:98577838-98577857 None:intergenic 45.0%
TCATGCACATATGAGGGTAG+GGG + Chr6:98578017-98578036 None:intergenic 45.0%
TTATTCCTCCAACCGGAAGA+AGG + Chr6:98578361-98578380 None:intergenic 45.0%
! CAAATGGAGTGTGTCATTGG+TGG - Chr6:98577931-98577950 MsG0680035079.01.T01:CDS 45.0%
!! CTAACCTTTTTAGCCGTCCA+AGG + Chr6:98577231-98577250 None:intergenic 45.0%
AAGGAAGTCCTTCTTCCGGT+TGG - Chr6:98578350-98578369 MsG0680035079.01.T01:CDS 50.0%
ACCACCACATGACTCCATGT+GGG - Chr6:98577821-98577840 MsG0680035079.01.T01:CDS 50.0%
CCTGAAGGATAATAGCCGGT+AGG + Chr6:98577897-98577916 None:intergenic 50.0%
TACCACCACATGACTCCATG+TGG - Chr6:98577820-98577839 MsG0680035079.01.T01:CDS 50.0%
! CCTACCGGCTATTATCCTTC+AGG - Chr6:98577894-98577913 MsG0680035079.01.T01:CDS 50.0%
ACCACATGACTCCATGTGGG+AGG - Chr6:98577824-98577843 MsG0680035079.01.T01:CDS 55.0%
ACCTCCCACATGGAGTCATG+TGG + Chr6:98577828-98577847 None:intergenic 55.0%
ACTCGAGAGGACTTGGAGGA+AGG + Chr6:98577659-98577678 None:intergenic 55.0%
GAAGTCCTTCTTCCGGTTGG+AGG - Chr6:98578353-98578372 MsG0680035079.01.T01:CDS 55.0%
TCCCACATGGAGTCATGTGG+TGG + Chr6:98577825-98577844 None:intergenic 55.0%
! GGAGTGTGTCATTGGTGGGA+TGG - Chr6:98577936-98577955 MsG0680035079.01.T01:CDS 55.0%
GGGGACTCGAGAGGACTTGG+AGG + Chr6:98577663-98577682 None:intergenic 65.0%
GGCGGGGACTCGAGAGGACT+TGG + Chr6:98577666-98577685 None:intergenic 70.0%
!! GAAGGTGGCGGGGACTCGAG+AGG + Chr6:98577672-98577691 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 98577204 98578412 98577204 ID=MsG0680035079.01;Name=MsG0680035079.01
Chr6 mRNA 98577204 98578412 98577204 ID=MsG0680035079.01.T01;Parent=MsG0680035079.01;Name=MsG0680035079.01.T01;_AED=0.55;_eAED=0.57;_QI=0|-1|0|1|-1|1|1|0|402
Chr6 exon 98577204 98578412 98577204 ID=MsG0680035079.01.T01:exon:14001;Parent=MsG0680035079.01.T01
Chr6 CDS 98577204 98578412 98577204 ID=MsG0680035079.01.T01:cds;Parent=MsG0680035079.01.T01
Gene Sequence

>MsG0680035079.01.T01

ATGGAGAAATTGAAATCGACAGATCCTTGGACGGCTAAAAAGGTTAGCAATCACATACCTGATGATTTTACGTTCTCCATTCTATCAAAATTGCCTCTTAAATCTTTGATTCGATTTAAATGTGTACGTAAATCATGGTCTCTCTTGTTCGAAAACCCTTATTTCATGAACATGTACCGCCTCAATTTTGCATCTAATAAAAATTACTCTTATGTGGATAATTCATGTCTCGTCTTAGATTCACTCGAGACAGATATACAACGTGATGCGATGTTTTCTCTTTCTGGCGAGAAATTCGAGAATAAGGTCAAATTAGATTGGCCACCTCCAATTCAAGATAATGAAGGTTTATATATATTGGATTATGTTGCTGATGGCACTATTTGTTTCTACCAAGGTTTGATAATACCGAAAATTACAATTTGGAACGTAACTACCAAGGAATTCAAGGTCCTTCCTCCAAGTCCTCTCGAGTCCCCGCCACCTTCTTATGAAAGTGTTATGTTTTCACTTCATGGATTTGGCTATGACCATGTTAGAAATGACCTTAAGGTAATTCAACATGTAGCCCATTGTATGCCTCTAACTGATTTTGAAAGTGAAAGTTATATCTCATTACCACCACATGACTCCATGTGGGAGGTATACAGCTTAAGAAGTAACTCATGGGAGAAACTTGATGTAGATATACCTACCGGCTATTATCCTTCAGGTATCGGAATACACACAAATGGAGTGTGTCATTGGTGGGATGGATTTGATGATTGCATGGTGTCATTTGACTTGACCAGCGATATATTCTGTAGAACACCCCTACCCTCATATGTGCATGATTATTTTGGTTTTGTATTGGTGGATAGACGATTGGTGACATTAAATGAATCCGTTGCTTTTATCTCAAGCTATGAAAATAAGTCAACAAGTTTTCACATATCAATTTTAGGTGAACTCGGTGTGAAAGAATCATGGACTAAACTCTTTGTTGTTGGACCATTAGATTGTGTTGACTATCCTATTGGAGGAGGGAATAAAGGTGATATATTCTTTATATCAAATGATGGAGAACTGGTTCGGTTTGATTTGAGTAAACAAATGATTGAGAATTATTGCATTCAAGATGCATTTTGTATTACGATACTCCTTCATAAGGAAGTCCTTCTTCCGGTTGGAGGAATAAAAAGTGTCAAAGCGTACGACAGTGATTATTAG
Protein sequence

>MsG0680035079.01.T01

MEKLKSTDPWTAKKVSNHIPDDFTFSILSKLPLKSLIRFKCVRKSWSLLFENPYFMNMYRLNFASNKNYSYVDNSCLVLDSLETDIQRDAMFSLSGEKFENKVKLDWPPPIQDNEGLYILDYVADGTICFYQGLIIPKITIWNVTTKEFKVLPPSPLESPPPSYESVMFSLHGFGYDHVRNDLKVIQHVAHCMPLTDFESESYISLPPHDSMWEVYSLRSNSWEKLDVDIPTGYYPSGIGIHTNGVCHWWDGFDDCMVSFDLTSDIFCRTPLPSYVHDYFGFVLVDRRLVTLNESVAFISSYENKSTSFHISILGELGVKESWTKLFVVGPLDCVDYPIGGGNKGDIFFISNDGELVRFDLSKQMIENYCIQDAFCITILLHKEVLLPVGGIKSVKAYDSDY*