AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035809.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035809.01.T01 MTR_6g090250 73.154 447 77 8 1 429 1 422 0.0 613
MsG0680035809.01.T01 MTR_6g079810 59.390 426 159 8 6 427 44 459 3.53e-163 468
MsG0680035809.01.T01 MTR_0134s0060 56.553 412 164 9 23 425 1 406 6.39e-151 434
MsG0680035809.01.T01 MTR_6g079770 57.794 417 159 10 20 426 3 412 2.82e-148 428
MsG0680035809.01.T01 MTR_6g086825 57.583 422 143 13 23 428 56 457 3.49e-147 427
MsG0680035809.01.T01 MTR_4g028510 57.385 413 148 10 23 426 4 397 1.67e-144 420
MsG0680035809.01.T01 MTR_0054s0090 54.415 419 165 10 19 428 2 403 3.10e-139 404
MsG0680035809.01.T01 MTR_4g028660 54.831 414 160 10 23 429 4 397 4.06e-138 401
MsG0680035809.01.T01 MTR_4g027450 54.831 414 160 10 23 429 4 397 4.06e-138 401
MsG0680035809.01.T01 MTR_0054s0100 53.791 422 169 11 16 428 1 405 4.84e-138 401
MsG0680035809.01.T01 MTR_4g028680 55.448 413 154 12 23 426 4 395 1.52e-137 400
MsG0680035809.01.T01 MTR_6g090180 54.273 433 166 12 9 429 24 436 2.63e-135 395
MsG0680035809.01.T01 MTR_4g130330 54.342 403 158 8 31 426 3 386 3.93e-135 394
MsG0680035809.01.T01 MTR_6g080680 54.327 416 154 7 18 425 2 389 1.76e-134 392
MsG0680035809.01.T01 MTR_6g078010 56.944 360 120 6 72 426 1 330 9.56e-132 383
MsG0680035809.01.T01 MTR_6g478230 52.036 442 145 12 16 428 1 404 3.02e-131 385
MsG0680035809.01.T01 MTR_4g028750 53.690 393 153 12 23 407 4 375 2.32e-124 366
MsG0680035809.01.T01 MTR_6g090260 79.058 191 38 2 240 429 73 262 1.14e-104 311
MsG0680035809.01.T01 MTR_6g090260 80.282 71 14 0 16 86 1 71 1.03e-28 114
MsG0680035809.01.T01 MTR_0129s0070 45.735 422 194 13 15 429 1 394 5.75e-104 314
MsG0680035809.01.T01 MTR_6g461660 45.176 425 195 12 16 429 1 398 6.02e-104 314
MsG0680035809.01.T01 MTR_5g097220 44.444 423 209 11 16 429 1 406 6.31e-103 312
MsG0680035809.01.T01 MTR_6g079790 55.418 323 116 8 114 427 2 305 4.91e-102 306
MsG0680035809.01.T01 MTR_0129s0120 46.043 417 193 12 20 429 3 394 1.20e-101 308
MsG0680035809.01.T01 MTR_5g097680 45.000 440 195 14 16 426 1 422 2.32e-101 308
MsG0680035809.01.T01 MTR_8g063440 45.122 410 187 11 23 426 1 378 4.77e-101 306
MsG0680035809.01.T01 MTR_2g021800 44.366 426 197 13 19 423 2 408 1.84e-99 303
MsG0680035809.01.T01 MTR_7g023800 46.978 364 130 8 74 429 1 309 1.37e-98 297
MsG0680035809.01.T01 MTR_2g022000 46.715 411 181 15 16 406 1 393 6.45e-98 300
MsG0680035809.01.T01 MTR_2g038680 43.662 426 200 13 20 426 2 406 7.42e-98 299
MsG0680035809.01.T01 MTR_7g104710 51.479 338 100 7 19 345 2 286 1.41e-97 295
MsG0680035809.01.T01 MTR_5g097330 43.619 431 187 14 22 429 4 401 4.03e-95 291
MsG0680035809.01.T01 MTR_0129s0050 45.084 417 192 15 24 423 4 400 6.15e-95 291
MsG0680035809.01.T01 MTR_6g087620 51.393 323 110 6 102 421 1 279 7.62e-95 286
MsG0680035809.01.T01 MTR_6g070880 57.993 269 100 8 1 264 1 261 2.01e-93 282
MsG0680035809.01.T01 MTR_6g071420 57.993 269 100 8 1 264 1 261 2.01e-93 282
MsG0680035809.01.T01 MTR_4g102410 42.757 428 206 15 17 428 43 447 1.51e-92 286
MsG0680035809.01.T01 MTR_2g021950 43.529 425 193 18 16 426 1 392 2.80e-92 284
MsG0680035809.01.T01 MTR_5g069390 41.647 425 191 14 29 427 20 413 3.76e-91 285
MsG0680035809.01.T01 MTR_4g055820 45.526 380 166 13 24 386 4 359 5.33e-91 280
MsG0680035809.01.T01 MTR_5g037680 42.891 422 169 14 31 425 4 380 8.71e-91 282
MsG0680035809.01.T01 MTR_8g012090 44.271 384 151 8 24 399 6 334 1.09e-90 278
MsG0680035809.01.T01 MTR_7g017130 43.571 420 202 15 16 427 1 393 2.49e-90 279
MsG0680035809.01.T01 MTR_7g017170 44.724 398 186 14 16 405 1 372 3.85e-89 276
MsG0680035809.01.T01 MTR_5g096630 42.657 429 201 16 22 428 6 411 5.03e-89 276
MsG0680035809.01.T01 MTR_2g104340 42.005 419 199 13 22 425 1 390 5.47e-89 276
MsG0680035809.01.T01 MTR_4g117550 41.928 415 184 13 19 425 2 367 3.53e-88 273
MsG0680035809.01.T01 MTR_3g011120 44.784 393 171 15 23 406 1 356 6.80e-88 272
MsG0680035809.01.T01 MTR_5g092850 42.410 415 211 12 24 429 5 400 1.00e-87 273
MsG0680035809.01.T01 MTR_1g007410 43.029 416 197 18 13 414 1 390 1.53e-86 270
MsG0680035809.01.T01 MTR_5g097350 43.590 429 179 15 19 429 2 385 1.62e-86 269
MsG0680035809.01.T01 MTR_2g021770 40.482 415 213 11 28 426 6 402 7.67e-86 268
MsG0680035809.01.T01 MTR_1g007450 44.000 400 192 13 23 412 1 378 2.12e-85 267
MsG0680035809.01.T01 MTR_8g064890 40.494 405 205 9 28 426 9 383 2.20e-85 266
MsG0680035809.01.T01 MTR_2g065840 39.379 419 206 13 23 427 1 385 4.32e-85 265
MsG0680035809.01.T01 MTR_5g074850 43.564 404 184 18 22 406 22 400 1.78e-84 277
MsG0680035809.01.T01 MTR_5g096910 40.855 421 193 12 24 426 6 388 2.52e-84 263
MsG0680035809.01.T01 MTR_8g033140 38.952 439 210 13 21 427 2 414 8.95e-84 263
MsG0680035809.01.T01 MTR_2g034700 42.677 396 174 12 26 411 5 357 2.78e-83 260
MsG0680035809.01.T01 MTR_7g069550 41.007 417 205 12 22 423 1 391 3.73e-83 261
MsG0680035809.01.T01 MTR_0831s0010 39.815 432 194 17 19 429 33 419 6.67e-83 261
MsG0680035809.01.T01 MTR_8g467670 40.967 393 184 12 27 410 6 359 2.98e-82 258
MsG0680035809.01.T01 MTR_8g464770 41.162 413 194 13 23 425 1 374 6.18e-82 257
MsG0680035809.01.T01 MTR_5g059430 39.560 455 201 16 16 428 1 423 1.01e-81 258
MsG0680035809.01.T01 MTR_2g104280 41.232 422 199 15 26 425 5 399 1.93e-81 256
MsG0680035809.01.T01 MTR_7g017040 41.667 420 206 13 22 429 4 396 2.13e-81 256
MsG0680035809.01.T01 MTR_2g065860 39.518 415 208 13 23 426 1 383 1.55e-80 254
MsG0680035809.01.T01 MTR_8g039500 42.228 386 174 16 23 399 1 346 5.24e-80 251
MsG0680035809.01.T01 MTR_8g041270 40.793 429 199 17 22 425 2 400 7.96e-80 252
MsG0680035809.01.T01 MTR_2g066170 40.436 413 205 15 23 426 1 381 2.29e-79 251
MsG0680035809.01.T01 MTR_1g053510 38.372 430 212 12 22 427 2 402 1.39e-77 247
MsG0680035809.01.T01 MTR_2g066200 38.995 418 210 13 23 428 1 385 1.74e-77 246
MsG0680035809.01.T01 MTR_8g033090 39.583 432 213 12 22 428 1 409 2.77e-77 246
MsG0680035809.01.T01 MTR_7g079640 40.409 391 169 13 28 403 8 349 5.37e-77 244
MsG0680035809.01.T01 MTR_8g018110 38.353 425 213 12 22 428 1 394 7.00e-77 244
MsG0680035809.01.T01 MTR_8g046310 39.387 424 189 15 22 427 1 374 9.21e-77 243
MsG0680035809.01.T01 MTR_6g079730 80.142 141 27 1 289 429 9 148 2.28e-75 232
MsG0680035809.01.T01 MTR_5g075370 41.562 397 195 19 31 410 4 380 2.61e-75 250
MsG0680035809.01.T01 MTR_5g024260 40.602 399 180 13 28 403 15 379 3.35e-75 241
MsG0680035809.01.T01 MTR_4g014370 38.621 435 206 16 25 428 2 406 5.38e-75 240
MsG0680035809.01.T01 MTR_5g092860 41.417 367 165 12 53 406 20 349 1.18e-74 238
MsG0680035809.01.T01 MTR_5g091140 39.706 408 186 14 12 403 26 389 1.32e-73 237
MsG0680035809.01.T01 MTR_2g064950 40.933 386 181 14 34 403 9 363 1.41e-73 236
MsG0680035809.01.T01 MTR_5g072060 41.495 388 176 11 34 410 5 352 1.01e-72 240
MsG0680035809.01.T01 MTR_5g064700 39.844 384 179 14 74 426 1 363 1.24e-71 230
MsG0680035809.01.T01 MTR_8g033110 38.106 433 221 13 22 428 1 412 1.65e-71 231
MsG0680035809.01.T01 MTR_5g043605 35.194 412 183 7 17 427 7 335 1.13e-70 228
MsG0680035809.01.T01 MTR_8g063330 38.320 381 184 15 23 385 1 348 1.54e-69 228
MsG0680035809.01.T01 MTR_2g066150 38.717 421 179 17 23 428 1 357 1.71e-69 224
MsG0680035809.01.T01 MTR_8g032980 36.902 439 217 16 24 427 4 417 2.30e-69 226
MsG0680035809.01.T01 MTR_7g111700 39.048 420 183 13 19 426 2 360 4.95e-69 223
MsG0680035809.01.T01 MTR_8g046200 36.784 454 199 16 24 427 3 418 1.05e-68 224
MsG0680035809.01.T01 MTR_8g013000 41.962 367 179 12 34 388 9 353 4.75e-67 219
MsG0680035809.01.T01 MTR_8g046220 36.530 438 206 15 24 427 3 402 2.19e-66 218
MsG0680035809.01.T01 MTR_5g074800 40.833 360 179 11 74 423 1 336 5.18e-66 214
MsG0680035809.01.T01 MTR_4g007940 39.091 330 155 10 102 414 28 328 6.06e-66 214
MsG0680035809.01.T01 MTR_5g076490 41.713 362 173 10 72 426 1 331 2.79e-64 210
MsG0680035809.01.T01 MTR_5g022850 36.881 404 174 14 33 425 14 347 8.34e-64 209
MsG0680035809.01.T01 MTR_1g007430 41.076 353 167 11 46 390 7 326 9.57e-64 208
MsG0680035809.01.T01 MTR_8g064790 35.610 410 180 13 23 426 1 332 1.34e-63 208
MsG0680035809.01.T01 MTR_6g465360 50.617 243 103 11 12 244 41 276 1.30e-61 201
MsG0680035809.01.T01 MTR_7g016930 40.379 369 174 14 23 388 5 330 1.91e-61 202
MsG0680035809.01.T01 MTR_8g063370 33.816 414 238 11 14 423 3 384 4.33e-61 203
MsG0680035809.01.T01 MTR_1g098180 37.136 412 180 14 31 427 15 362 6.33e-60 199
MsG0680035809.01.T01 MTR_8g063350 35.248 383 168 12 29 403 8 318 7.33e-60 199
MsG0680035809.01.T01 MTR_5g096900 40.057 352 149 12 26 354 2 314 9.53e-59 195
MsG0680035809.01.T01 MTR_5g068490 36.593 317 150 8 111 427 8 273 1.04e-55 186
MsG0680035809.01.T01 MTR_2g021920 45.122 246 113 9 191 426 35 268 1.22e-53 180
MsG0680035809.01.T01 MTR_8g063310 33.649 422 221 17 21 423 8 389 2.11e-53 184
MsG0680035809.01.T01 MTR_8g036970 34.884 387 160 11 39 412 2 309 4.09e-52 179
MsG0680035809.01.T01 MTR_6g004450 44.118 238 111 8 193 428 49 266 1.25e-51 175
MsG0680035809.01.T01 MTR_5g094350 38.095 294 143 7 33 315 11 276 2.33e-50 172
MsG0680035809.01.T01 MTR_5g086590 41.502 253 116 6 152 404 13 233 3.84e-50 170
MsG0680035809.01.T01 MTR_1g050312 37.695 321 129 14 102 411 16 276 5.44e-49 168
MsG0680035809.01.T01 MTR_8g033000 35.567 388 189 16 72 427 1 359 1.11e-48 170
MsG0680035809.01.T01 MTR_5g023970 47.619 189 95 3 240 428 9 193 6.10e-48 163
MsG0680035809.01.T01 MTR_5g097850 49.198 187 79 4 247 426 63 240 4.05e-47 162
MsG0680035809.01.T01 MTR_3g018750 41.365 249 126 9 191 429 1 239 2.39e-45 157
MsG0680035809.01.T01 MTR_4g016000 40.336 238 96 7 157 390 2 197 1.19e-44 155
MsG0680035809.01.T01 MTR_1g076810 41.667 264 123 9 18 274 2 241 9.88e-44 162
MsG0680035809.01.T01 MTR_1g050308 37.324 284 112 12 8 266 1 243 1.05e-43 156
MsG0680035809.01.T01 MTR_1g050308 48.315 89 42 2 322 406 238 326 1.48e-16 80.9
MsG0680035809.01.T01 MTR_5g097820 36.491 285 130 12 16 280 1 254 8.74e-43 151
MsG0680035809.01.T01 MTR_2g104260 37.624 303 145 11 22 306 1 277 1.30e-41 149
MsG0680035809.01.T01 MTR_7g019250 39.631 217 102 4 192 406 223 412 6.40e-40 149
MsG0680035809.01.T01 MTR_6g009350 40.394 203 104 5 193 393 8 195 5.56e-39 139
MsG0680035809.01.T01 MTR_3g030620 44.375 160 82 3 270 425 20 176 1.48e-37 135
MsG0680035809.01.T01 MTR_4g014370 42.268 194 92 6 242 428 154 334 7.19e-37 137
MsG0680035809.01.T01 MTR_4g014370 44.853 136 62 7 16 142 6 137 1.68e-18 86.7
MsG0680035809.01.T01 MTR_1g115205 38.202 267 114 11 17 279 16 235 9.24e-37 135
MsG0680035809.01.T01 MTR_8g073570 42.703 185 88 5 23 204 1 170 1.17e-36 132
MsG0680035809.01.T01 MTR_5g066420 49.640 139 68 2 273 409 1 139 1.68e-36 131
MsG0680035809.01.T01 MTR_5g037190 37.884 293 131 11 16 300 1 250 3.43e-36 134
MsG0680035809.01.T01 MTR_8g035690 37.218 266 128 11 185 427 50 299 4.11e-35 132
MsG0680035809.01.T01 MTR_4g094400 58.716 109 34 1 266 363 3 111 1.37e-34 125
MsG0680035809.01.T01 MTR_5g098950 38.983 236 92 9 154 388 90 274 1.75e-34 129
MsG0680035809.01.T01 MTR_7g017150 41.969 193 96 5 242 428 82 264 6.64e-34 128
MsG0680035809.01.T01 MTR_7g017120 41.451 193 97 5 242 428 81 263 1.92e-33 127
MsG0680035809.01.T01 MTR_5g096920 45.455 154 75 4 273 425 1 146 4.95e-33 122
MsG0680035809.01.T01 MTR_5g097540 45.270 148 69 4 242 388 97 233 2.26e-30 119
MsG0680035809.01.T01 MTR_5g036250 54.902 102 44 1 326 427 8 107 9.20e-30 114
MsG0680035809.01.T01 MTR_5g097660 51.724 116 54 2 314 428 3 117 3.77e-29 110
MsG0680035809.01.T01 MTR_5g086780 48.413 126 60 1 281 406 108 228 1.59e-28 112
MsG0680035809.01.T01 MTR_5g086780 66.667 60 16 2 16 75 1 56 8.24e-13 68.2
MsG0680035809.01.T01 MTR_5g097650 44.444 162 74 6 18 173 2 153 2.26e-27 107
MsG0680035809.01.T01 MTR_5g096070 40.323 186 68 8 20 200 11 158 4.84e-26 103
MsG0680035809.01.T01 MTR_1g047080 28.375 363 169 14 72 427 1 279 1.12e-25 106
MsG0680035809.01.T01 MTR_5g091150 34.146 246 76 9 114 336 2 184 1.16e-25 103
MsG0680035809.01.T01 MTR_2g022020 41.880 117 65 1 309 425 1 114 4.73e-24 96.7
MsG0680035809.01.T01 MTR_1g068835 25.197 381 232 16 33 405 2 337 5.55e-24 103
MsG0680035809.01.T01 MTR_7g101200 34.167 240 105 13 152 387 38 228 7.00e-24 99.8
MsG0680035809.01.T01 MTR_1g068860 26.075 372 226 16 38 402 7 336 3.94e-22 97.8
MsG0680035809.01.T01 MTR_6g087660 72.059 68 17 1 16 83 1 66 4.35e-22 93.6
MsG0680035809.01.T01 MTR_5g096050 48.148 108 48 1 273 372 1 108 4.41e-22 91.3
MsG0680035809.01.T01 MTR_3g009310 25.948 343 180 13 38 366 45 327 1.53e-21 96.3
MsG0680035809.01.T01 MTR_0667s0010 24.051 395 239 15 30 402 1 356 1.75e-21 96.3
MsG0680035809.01.T01 MTR_2g426070 25.587 383 222 18 43 402 14 356 3.04e-21 95.5
MsG0680035809.01.T01 MTR_3g019290 34.361 227 99 8 23 248 1 178 3.30e-21 90.9
MsG0680035809.01.T01 MTR_2g426060 26.683 401 217 19 38 408 9 362 4.02e-21 95.1
MsG0680035809.01.T01 MTR_3g009240 27.568 370 201 18 38 400 39 348 8.07e-21 94.0
MsG0680035809.01.T01 MTR_2g028130 23.664 393 243 13 35 402 5 365 1.45e-20 93.6
MsG0680035809.01.T01 MTR_1g068875 24.672 381 229 17 35 405 4 336 1.62e-20 93.2
MsG0680035809.01.T01 MTR_2g031720 25.064 391 228 18 30 403 1 343 3.95e-20 92.0
MsG0680035809.01.T01 MTR_6g065980 24.934 381 210 15 38 411 19 330 4.74e-20 91.3
MsG0680035809.01.T01 MTR_2g028160 23.529 391 242 14 38 402 8 367 8.50e-20 91.3
MsG0680035809.01.T01 MTR_3g006670 27.100 369 195 17 38 392 52 360 2.39e-19 90.1
MsG0680035809.01.T01 MTR_2g028110 25.401 374 228 15 38 403 7 337 2.78e-19 89.4
MsG0680035809.01.T01 MTR_3g014540 23.737 396 232 15 35 417 29 367 5.82e-19 88.6
MsG0680035809.01.T01 MTR_3g013740 27.835 388 212 18 21 392 31 366 6.92e-19 88.6
MsG0680035809.01.T01 MTR_5g070080 24.105 419 240 19 34 425 9 376 1.39e-18 87.4
MsG0680035809.01.T01 MTR_2g021150 27.198 364 211 17 34 392 13 327 1.42e-18 87.4
MsG0680035809.01.T01 MTR_0064s0160 24.424 434 267 20 13 425 24 417 3.41e-18 86.7
MsG0680035809.01.T01 MTR_4g061340 25.978 358 210 15 19 369 10 319 1.10e-17 84.7
MsG0680035809.01.T01 MTR_2g426020 23.232 396 240 16 30 402 1 355 1.89e-17 84.3
MsG0680035809.01.T01 MTR_3g083010 23.951 405 226 17 38 402 9 371 2.16e-17 84.0
MsG0680035809.01.T01 MTR_2g026010 25.549 364 210 21 54 402 23 340 2.37e-17 84.0
MsG0680035809.01.T01 MTR_4g021785 23.342 407 241 16 28 425 2 346 2.54e-17 83.2
MsG0680035809.01.T01 MTR_2g425980 24.745 392 233 17 38 406 8 360 3.09e-17 83.6
MsG0680035809.01.T01 MTR_2g024110 22.959 392 231 16 35 405 4 345 3.96e-17 82.8
MsG0680035809.01.T01 MTR_2g078900 22.739 387 227 14 15 392 13 336 6.67e-17 82.0
MsG0680035809.01.T01 MTR_3g011060 26.250 400 221 20 38 417 31 376 8.17e-17 82.0
MsG0680035809.01.T01 MTR_5g057790 25.223 337 196 14 38 369 49 334 1.39e-16 81.6
MsG0680035809.01.T01 MTR_5g057710 25.959 339 191 15 38 369 49 334 1.52e-16 81.3
MsG0680035809.01.T01 MTR_4g070550 23.737 396 227 16 38 402 8 359 1.56e-16 81.3
MsG0680035809.01.T01 MTR_2g024100 24.427 393 231 17 36 402 8 360 2.08e-16 80.9
MsG0680035809.01.T01 MTR_4g023080 23.913 414 229 18 28 425 2 345 2.67e-16 80.1
MsG0680035809.01.T01 MTR_8g101580 26.647 334 185 13 39 365 50 330 5.10e-16 79.7
MsG0680035809.01.T01 MTR_2g021155 26.158 367 218 17 38 402 39 354 1.05e-15 80.1
MsG0680035809.01.T01 MTR_1g061330 22.359 407 252 14 35 429 4 358 1.07e-15 79.0
MsG0680035809.01.T01 MTR_8g073550 27.391 230 119 7 34 257 29 216 1.24e-15 76.3
MsG0680035809.01.T01 MTR_1g097330 25.816 337 189 14 35 365 16 297 1.75e-15 78.2
MsG0680035809.01.T01 MTR_8g102520 25.915 355 184 18 81 425 28 313 1.83e-15 77.4
MsG0680035809.01.T01 MTR_2g031640 23.936 376 225 18 38 400 9 336 1.98e-15 77.8
MsG0680035809.01.T01 MTR_3g013770 25.505 396 227 17 38 421 36 375 2.39e-15 77.8
MsG0680035809.01.T01 MTR_4g023090 25.060 415 228 21 22 420 1 348 2.87e-15 77.4
MsG0680035809.01.T01 MTR_3g047580 34.459 148 73 5 22 166 1 127 3.48e-15 72.4
MsG0680035809.01.T01 MTR_3g007410 27.729 339 171 19 43 366 60 339 1.05e-14 75.9
MsG0680035809.01.T01 MTR_4g117780 28.405 257 121 13 35 280 11 215 1.88e-14 74.7
MsG0680035809.01.T01 MTR_2g029990 26.230 366 201 22 38 392 54 361 1.89e-14 75.1
MsG0680035809.01.T01 MTR_2g055970 27.114 343 197 15 27 365 203 496 4.04e-14 74.7
MsG0680035809.01.T01 MTR_5g070130 22.356 416 259 15 29 429 5 371 5.44e-14 73.6
MsG0680035809.01.T01 MTR_3g036290 23.823 361 201 15 38 392 25 317 6.19e-14 73.2
MsG0680035809.01.T01 MTR_1g009110 23.684 380 193 17 25 371 4 319 7.66e-14 73.2
MsG0680035809.01.T01 MTR_3g007360 27.515 338 171 19 43 365 60 338 9.47e-14 72.8
MsG0680035809.01.T01 MTR_2g031680 24.607 382 232 18 30 402 1 335 1.07e-13 72.8
MsG0680035809.01.T01 MTR_1g050305 48.718 78 35 2 331 403 21 98 1.14e-13 68.6
MsG0680035809.01.T01 MTR_0115s0020 24.065 428 260 19 30 428 5 396 1.31e-13 72.4
MsG0680035809.01.T01 MTR_7g407070 25.946 370 215 18 38 392 35 360 1.47e-13 72.4
MsG0680035809.01.T01 MTR_8g467140 26.879 346 196 17 26 365 23 317 1.68e-13 71.6
MsG0680035809.01.T01 MTR_4g055060 24.615 390 229 20 16 392 8 345 1.71e-13 72.0
MsG0680035809.01.T01 MTR_8g013010 26.042 288 166 10 34 316 53 298 1.84e-13 71.2
MsG0680035809.01.T01 MTR_4g116330 22.392 393 231 16 17 391 7 343 1.94e-13 72.0
MsG0680035809.01.T01 MTR_3g097190 52.727 55 26 0 350 404 28 82 2.40e-13 68.6
MsG0680035809.01.T01 MTR_4g121580 23.352 364 190 14 16 367 1 287 2.59e-13 71.6
MsG0680035809.01.T01 MTR_3g047540 46.067 89 36 4 242 329 6 83 3.41e-13 65.5
MsG0680035809.01.T01 MTR_3g034180 23.877 423 239 18 28 425 116 480 3.60e-13 71.6
MsG0680035809.01.T01 MTR_3g034160 23.697 422 241 18 28 425 2 366 3.91e-13 70.9
MsG0680035809.01.T01 MTR_2g046830 23.653 334 204 15 34 365 24 308 3.98e-13 70.9
MsG0680035809.01.T01 MTR_2g025960 23.288 292 170 17 134 402 5 265 4.64e-13 70.1
MsG0680035809.01.T01 MTR_3g006570 24.793 363 207 19 38 392 24 328 4.70e-13 70.9
MsG0680035809.01.T01 MTR_4g122850 24.528 371 201 18 46 391 12 328 6.46e-13 70.1
MsG0680035809.01.T01 MTR_3g009260 26.506 332 183 17 38 365 44 318 6.53e-13 70.1
MsG0680035809.01.T01 MTR_1g055135 23.404 423 247 20 23 425 1 366 8.99e-13 69.7
MsG0680035809.01.T01 MTR_8g041440 40.777 103 41 3 32 127 12 101 9.13e-13 65.1
MsG0680035809.01.T01 MTR_1g056710 26.923 338 175 16 38 362 37 315 2.15e-12 68.6
MsG0680035809.01.T01 MTR_1g055070 24.399 291 179 13 22 302 36 295 2.64e-12 68.6
MsG0680035809.01.T01 MTR_4g024890 24.932 365 191 16 28 366 3 310 2.70e-12 68.6
MsG0680035809.01.T01 MTR_4g023120 25.175 286 161 11 35 314 3 241 2.95e-12 68.2
MsG0680035809.01.T01 MTR_4g023070 25.175 286 161 13 35 314 3 241 3.49e-12 67.8
MsG0680035809.01.T01 MTR_3g007270 24.490 343 197 13 38 366 50 344 3.73e-12 68.2
MsG0680035809.01.T01 MTR_3g036335 23.250 400 231 21 10 392 9 349 3.75e-12 68.2
MsG0680035809.01.T01 MTR_3g007430 23.824 340 204 15 43 377 51 340 4.88e-12 67.8
MsG0680035809.01.T01 MTR_5g010550 25.000 380 191 17 35 365 44 378 6.38e-12 67.8
MsG0680035809.01.T01 MTR_5g011200 23.662 355 211 15 20 365 2 305 6.45e-12 67.0
MsG0680035809.01.T01 MTR_5g010550 25.538 372 183 17 43 365 66 392 6.93e-12 67.4
MsG0680035809.01.T01 MTR_4g117770 25.097 259 141 11 28 280 4 215 9.39e-12 66.6
MsG0680035809.01.T01 MTR_4g117810 25.097 259 141 11 28 280 4 215 9.39e-12 66.6
MsG0680035809.01.T01 MTR_5g049560 36.441 118 59 3 99 208 38 147 1.13e-11 65.5
MsG0680035809.01.T01 MTR_1g068905 22.554 368 179 14 38 402 7 271 1.51e-11 65.5
MsG0680035809.01.T01 MTR_5g069760 23.691 363 189 15 30 366 1 301 1.78e-11 65.9
MsG0680035809.01.T01 MTR_5g022420 22.195 410 232 15 23 417 15 352 2.33e-11 65.5
MsG0680035809.01.T01 MTR_6g053260 23.958 384 226 15 19 392 321 648 2.49e-11 66.2
MsG0680035809.01.T01 MTR_5g010560 25.737 373 179 19 43 365 52 376 3.45e-11 65.5
MsG0680035809.01.T01 MTR_2g046920 24.286 350 187 15 34 368 23 309 5.20e-11 64.3
MsG0680035809.01.T01 MTR_3g024040 24.742 388 195 22 43 404 39 355 5.35e-11 64.3
MsG0680035809.01.T01 MTR_1g023400 22.946 353 212 12 38 381 6 307 5.52e-11 64.3
MsG0680035809.01.T01 MTR_4g116330 25.000 272 147 13 17 280 7 229 5.92e-11 63.9
MsG0680035809.01.T01 MTR_2g046900 24.478 335 208 16 34 365 27 319 6.25e-11 64.3
MsG0680035809.01.T01 MTR_5g070088 23.796 353 210 15 31 365 3 314 7.86e-11 63.9
MsG0680035809.01.T01 MTR_8g032390 22.670 397 207 19 17 406 25 328 7.91e-11 63.9
MsG0680035809.01.T01 MTR_4g117720 24.138 319 183 14 122 427 98 370 8.11e-11 63.9
MsG0680035809.01.T01 MTR_3g007330 24.324 333 199 13 43 374 56 336 9.98e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035809.01.T01 AT4G12560 21.875 384 243 14 38 405 7 349 1.38e-11 66.2
MsG0680035809.01.T01 AT4G12560 21.875 384 243 14 38 405 7 349 1.38e-11 66.2
MsG0680035809.01.T01 AT4G12560 21.875 384 243 14 38 405 7 349 1.38e-11 66.2
MsG0680035809.01.T01 AT3G16210 23.512 336 181 18 32 362 2 266 8.90e-11 63.5

Find 83 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATATGAATATGGTAATTT+TGG 0.114856 6:-112636082 MsG0680035809.01.T01:CDS
AGGCTATATATCTCCCATTT+TGG 0.208020 6:+112635794 None:intergenic
GAGATATTAATTCACCAAAA+TGG 0.223250 6:-112635808 MsG0680035809.01.T01:CDS
TCTTAGGATAATAAATTATA+AGG 0.240866 6:-112635270 MsG0680035809.01.T01:CDS
TCAAAACAATCATCTACTTC+TGG 0.243521 6:+112635581 None:intergenic
CTCTTCTCATCTTGAATTGA+TGG 0.287015 6:-112636485 MsG0680035809.01.T01:CDS
AACGCCCTTCTTCATGGATT+TGG 0.298259 6:-112635947 MsG0680035809.01.T01:CDS
TGTCTCCATCTATATGAATA+TGG 0.317732 6:-112636091 MsG0680035809.01.T01:CDS
TCGTAACCAGTTGATGAATT+TGG 0.323281 6:+112635866 None:intergenic
AGCTTGATTGTTTGGGTAGT+TGG 0.330843 6:+112636040 None:intergenic
TCCGTTAACGCCCTTCTTCA+TGG 0.335099 6:-112635953 MsG0680035809.01.T01:CDS
ATAAACTTGGCTGTGTTAAA+TGG 0.335856 6:-112635542 MsG0680035809.01.T01:CDS
TGTTGACATGCCGTATTCTA+TGG 0.340159 6:-112635744 MsG0680035809.01.T01:CDS
AACCAAGCACCTCAATCATT+TGG 0.340170 6:+112635315 None:intergenic
GAAATTGTTTCTCATCGGTT+TGG 0.350246 6:-112635830 MsG0680035809.01.T01:CDS
AACCTCTCCTCAGTTACATT+AGG 0.358992 6:+112635986 None:intergenic
GCTTGATTGTTTGGGTAGTT+GGG 0.372378 6:+112636041 None:intergenic
GTGGAAGAAGCTTGATTGTT+TGG 0.373399 6:+112636032 None:intergenic
TAAACTACTTATTCCTCAAA+TGG 0.380948 6:+112635236 None:intergenic
TGCACCTTCACATTGAGAAT+TGG 0.381772 6:+112636270 None:intergenic
AAAGAGTTATCTTCTTCAAA+TGG 0.388433 6:+112636151 None:intergenic
AATTACCATATTCATATAGA+TGG 0.391520 6:+112636086 None:intergenic
AGAGGGAACCCGAGTCTATA+TGG 0.401222 6:-112635714 MsG0680035809.01.T01:CDS
ATAAGACCAAATTCATCAAC+TGG 0.403258 6:-112635872 MsG0680035809.01.T01:CDS
CAAAACAATCATCTACTTCT+GGG 0.406089 6:+112635582 None:intergenic
ACCTCTCCTCAGTTACATTA+GGG 0.406948 6:+112635987 None:intergenic
GGAAAGCATTGTTCCATTTG+AGG 0.409137 6:-112635249 MsG0680035809.01.T01:CDS
AGATATTAATTCACCAAAAT+GGG 0.413215 6:-112635807 MsG0680035809.01.T01:CDS
ATCGTGGATCAAACTCTTCA+TGG 0.413723 6:-112635441 MsG0680035809.01.T01:CDS
TCCATGAAGAAGGGCGTTAA+CGG 0.414554 6:+112635952 None:intergenic
ATATGGATGGTGTGTGTCAT+TGG 0.414992 6:-112635697 MsG0680035809.01.T01:CDS
AAACGCTTGAAAGATTTAAG+AGG 0.425978 6:+112636370 None:intergenic
TATGCCGGTTGGACAATGTT+TGG 0.434378 6:-112635651 MsG0680035809.01.T01:CDS
CCTATCGGAGTGGGGACAAA+GGG 0.442789 6:-112635392 MsG0680035809.01.T01:CDS
ACCAAGCACCTCAATCATTT+GGG 0.444957 6:+112635316 None:intergenic
GACGGTTGATTCATAGTCAC+TGG 0.447826 6:+112636009 None:intergenic
TGGAAGAAGCTTGATTGTTT+GGG 0.449335 6:+112636033 None:intergenic
TTGAATGTGTTTGTAAATCA+TGG 0.449872 6:-112636348 MsG0680035809.01.T01:CDS
GATACCAAACATTGTCCAAC+CGG 0.468176 6:+112635647 None:intergenic
TTTAAGTACCCAAATGATTG+AGG 0.486383 6:-112635324 MsG0680035809.01.T01:CDS
CATTATAGTCATTTGTAACA+TGG 0.494018 6:+112635918 None:intergenic
GAAAAGATAATGAAGTGGCT+TGG 0.496468 6:-112635352 MsG0680035809.01.T01:CDS
TATAACCAAATCCATGAAGA+AGG 0.504073 6:+112635942 None:intergenic
TCAAAGAAATTGTTTCTCAT+CGG 0.505189 6:-112635835 MsG0680035809.01.T01:CDS
CCTTACGTTGAGCGTCCTAT+CGG 0.505399 6:-112635407 MsG0680035809.01.T01:CDS
CAAATGACTATAATGTCATT+CGG 0.507052 6:-112635910 MsG0680035809.01.T01:CDS
TAGCGCAAAGTGGATAAACT+TGG 0.509940 6:-112635555 MsG0680035809.01.T01:CDS
CCCTTTGTCCCCACTCCGAT+AGG 0.513186 6:+112635392 None:intergenic
CCGATAGGACGCTCAACGTA+AGG 0.516335 6:+112635407 None:intergenic
TCTCTACGTTCCATAGAATA+CGG 0.517105 6:+112635734 None:intergenic
ATGATATGAGATCAATGCTA+TGG 0.518105 6:+112635517 None:intergenic
TTATCCAATTCTCAATGTGA+AGG 0.532349 6:-112636274 MsG0680035809.01.T01:CDS
ACCCAAATGATTGAGGTGCT+TGG 0.532373 6:-112635317 MsG0680035809.01.T01:CDS
TGGATCAAACTCTTCATGGT+TGG 0.542872 6:-112635437 MsG0680035809.01.T01:CDS
TCCTATCGGAGTGGGGACAA+AGG 0.543727 6:-112635393 MsG0680035809.01.T01:CDS
GAAGGACACTTCATTGCTCA+AGG 0.564204 6:+112635619 None:intergenic
GTTGAGCGTCCTATCGGAGT+GGG 0.567484 6:-112635401 MsG0680035809.01.T01:CDS
AAAACAATCATCTACTTCTG+GGG 0.586520 6:+112635583 None:intergenic
CTCCTCAGTTACATTAGGGA+CGG 0.591249 6:+112635991 None:intergenic
AATGGAGAAGGCAATATCAT+CGG 0.594417 6:+112636405 None:intergenic
AATATCATCGGATATATATG+TGG 0.596831 6:+112636417 None:intergenic
CATAAGAAAAGATAATGAAG+TGG 0.598750 6:-112635357 MsG0680035809.01.T01:CDS
GGTTGCTGCAACGAGTGAAA+AGG 0.608816 6:-112636446 MsG0680035809.01.T01:CDS
ACACACCATCCATATAGACT+CGG 0.614078 6:+112635705 None:intergenic
AACTCGGTTTCAAAGAATCG+TGG 0.617879 6:-112635457 MsG0680035809.01.T01:CDS
AAACAATCATCTACTTCTGG+GGG 0.620086 6:+112635584 None:intergenic
GTATTCTATGGAACGTAGAG+AGG 0.622075 6:-112635732 MsG0680035809.01.T01:CDS
TATTCTATGGAACGTAGAGA+GGG 0.623023 6:-112635731 MsG0680035809.01.T01:CDS
GATCTCATATCATATGAAGA+CGG 0.625708 6:-112635507 MsG0680035809.01.T01:CDS
ATAACCAAATCCATGAAGAA+GGG 0.630432 6:+112635943 None:intergenic
GGAACCCGAGTCTATATGGA+TGG 0.634610 6:-112635710 MsG0680035809.01.T01:CDS
CGTTGAGCGTCCTATCGGAG+TGG 0.637751 6:-112635402 MsG0680035809.01.T01:CDS
CACACCATCCATATAGACTC+GGG 0.652998 6:+112635706 None:intergenic
ACGGTTGATTCATAGTCACT+GGG 0.659137 6:+112636010 None:intergenic
AATTCATCAACTGGTTACGA+TGG 0.659945 6:-112635863 MsG0680035809.01.T01:CDS
TCCCTAATGTAACTGAGGAG+AGG 0.665403 6:-112635988 MsG0680035809.01.T01:CDS
GGACGCTCAACGTAAGGCAA+CGG 0.667318 6:+112635413 None:intergenic
AACCGTCCCTAATGTAACTG+AGG 0.667711 6:-112635993 MsG0680035809.01.T01:CDS
GATGGAGAAGAAGAAATCAG+TGG 0.673427 6:-112636467 MsG0680035809.01.T01:CDS
CTATCGGAGTGGGGACAAAG+GGG 0.689791 6:-112635391 MsG0680035809.01.T01:CDS
TTGAGCGTCCTATCGGAGTG+GGG 0.697017 6:-112635400 MsG0680035809.01.T01:CDS
GTTGATTCATAGTCACTGGG+TGG 0.714748 6:+112636013 None:intergenic
AATTGGATAAGAAATTGTAG+CGG 0.721360 6:+112636287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATATAAAAAATATATGC+CGG - Chr6:112636089-112636108 MsG0680035809.01.T01:CDS 15.0%
!! TCTTAGGATAATAAATTATA+AGG - Chr6:112636485-112636504 MsG0680035809.01.T01:CDS 15.0%
!! AATTACCATATTCATATAGA+TGG + Chr6:112635672-112635691 None:intergenic 20.0%
!! AGATATTAATTCACCAAAAT+GGG - Chr6:112635948-112635967 MsG0680035809.01.T01:CDS 20.0%
!!! ACTTTTCATGTATCAATTTT+GGG - Chr6:112636273-112636292 MsG0680035809.01.T01:CDS 20.0%
!!! CTATATGAATATGGTAATTT+TGG - Chr6:112635673-112635692 MsG0680035809.01.T01:CDS 20.0%
!!! GATAACTCTTTTTATATTGT+TGG - Chr6:112635616-112635635 MsG0680035809.01.T01:CDS 20.0%
!!! TACTTTTCATGTATCAATTT+TGG - Chr6:112636272-112636291 MsG0680035809.01.T01:CDS 20.0%
!!! TCTTTTTATATTGTTGGTTT+TGG - Chr6:112635622-112635641 MsG0680035809.01.T01:CDS 20.0%
! AAAGAGTTATCTTCTTCAAA+TGG + Chr6:112635607-112635626 None:intergenic 25.0%
! AATATCATCGGATATATATG+TGG + Chr6:112635341-112635360 None:intergenic 25.0%
! AATTGGATAAGAAATTGTAG+CGG + Chr6:112635471-112635490 None:intergenic 25.0%
! CAAATGACTATAATGTCATT+CGG - Chr6:112635845-112635864 MsG0680035809.01.T01:CDS 25.0%
! CATAAGAAAAGATAATGAAG+TGG - Chr6:112636398-112636417 MsG0680035809.01.T01:CDS 25.0%
! CATTATAGTCATTTGTAACA+TGG + Chr6:112635840-112635859 None:intergenic 25.0%
! GAGATATTAATTCACCAAAA+TGG - Chr6:112635947-112635966 MsG0680035809.01.T01:CDS 25.0%
! TATAAAAAATATATGCCGGT+TGG - Chr6:112636093-112636112 MsG0680035809.01.T01:CDS 25.0%
! TTGAATGTGTTTGTAAATCA+TGG - Chr6:112635407-112635426 MsG0680035809.01.T01:CDS 25.0%
!! TCAAAGAAATTGTTTCTCAT+CGG - Chr6:112635920-112635939 MsG0680035809.01.T01:CDS 25.0%
!!! GAAGTTTTGTATTCTTTTTC+TGG - Chr6:112635541-112635560 MsG0680035809.01.T01:CDS 25.0%
AAAACAATCATCTACTTCTG+GGG + Chr6:112636175-112636194 None:intergenic 30.0%
AAACGCTTGAAAGATTTAAG+AGG + Chr6:112635388-112635407 None:intergenic 30.0%
ATAAACTTGGCTGTGTTAAA+TGG - Chr6:112636213-112636232 MsG0680035809.01.T01:CDS 30.0%
ATAACCAAATCCATGAAGAA+GGG + Chr6:112635815-112635834 None:intergenic 30.0%
ATAAGACCAAATTCATCAAC+TGG - Chr6:112635883-112635902 MsG0680035809.01.T01:CDS 30.0%
ATAGCCTAAAAAGTAATTCG+TGG - Chr6:112635977-112635996 MsG0680035809.01.T01:CDS 30.0%
ATGATATGAGATCAATGCTA+TGG + Chr6:112636241-112636260 None:intergenic 30.0%
CAAAACAATCATCTACTTCT+GGG + Chr6:112636176-112636195 None:intergenic 30.0%
GATCTCATATCATATGAAGA+CGG - Chr6:112636248-112636267 MsG0680035809.01.T01:CDS 30.0%
TATAACCAAATCCATGAAGA+AGG + Chr6:112635816-112635835 None:intergenic 30.0%
TCAAAACAATCATCTACTTC+TGG + Chr6:112636177-112636196 None:intergenic 30.0%
TGTCTCCATCTATATGAATA+TGG - Chr6:112635664-112635683 MsG0680035809.01.T01:CDS 30.0%
TTATCCAATTCTCAATGTGA+AGG - Chr6:112635481-112635500 MsG0680035809.01.T01:CDS 30.0%
TTTAAGTACCCAAATGATTG+AGG - Chr6:112636431-112636450 MsG0680035809.01.T01:CDS 30.0%
! AGTTTTCAATTACAAAGAGC+AGG + Chr6:112635516-112635535 None:intergenic 30.0%
! GTTTTCAATTACAAAGAGCA+GGG + Chr6:112635515-112635534 None:intergenic 30.0%
! TTTTCAATTACAAAGAGCAG+GGG + Chr6:112635514-112635533 None:intergenic 30.0%
!! AAGAGGTAATTTTGAGAGAA+TGG + Chr6:112635371-112635390 None:intergenic 30.0%
!! ATTTTGGAAAAATTGTGCTG+TGG - Chr6:112635689-112635708 MsG0680035809.01.T01:CDS 30.0%
!! TAATTTTGAGAGAATGGAGA+AGG + Chr6:112635365-112635384 None:intergenic 30.0%
!!! CAAAGAGTTGTCATTTTCTT+AGG - Chr6:112636469-112636488 MsG0680035809.01.T01:CDS 30.0%
!!! GTTGGTTTTGGTAGTATTAA+TGG - Chr6:112635634-112635653 MsG0680035809.01.T01:CDS 30.0%
AAACAATCATCTACTTCTGG+GGG + Chr6:112636174-112636193 None:intergenic 35.0%
AATGGAGAAGGCAATATCAT+CGG + Chr6:112635353-112635372 None:intergenic 35.0%
AATTCATCAACTGGTTACGA+TGG - Chr6:112635892-112635911 MsG0680035809.01.T01:CDS 35.0%
CTCTTCTCATCTTGAATTGA+TGG - Chr6:112635270-112635289 MsG0680035809.01.T01:CDS 35.0%
GAAAAGATAATGAAGTGGCT+TGG - Chr6:112636403-112636422 MsG0680035809.01.T01:CDS 35.0%
TATTCTATGGAACGTAGAGA+GGG - Chr6:112636024-112636043 MsG0680035809.01.T01:CDS 35.0%
TCTCTACGTTCCATAGAATA+CGG + Chr6:112636024-112636043 None:intergenic 35.0%
TGGAAGAAGCTTGATTGTTT+GGG + Chr6:112635725-112635744 None:intergenic 35.0%
! AGGCTATATATCTCCCATTT+TGG + Chr6:112635964-112635983 None:intergenic 35.0%
! GAAATTGTTTCTCATCGGTT+TGG - Chr6:112635925-112635944 MsG0680035809.01.T01:CDS 35.0%
!! GTATCAATTTTGGGTCAACT+CGG - Chr6:112636282-112636301 MsG0680035809.01.T01:CDS 35.0%
!! TCGTAACCAGTTGATGAATT+TGG + Chr6:112635892-112635911 None:intergenic 35.0%
!! TGTATTCTTTTTCTGGTGAG+AGG - Chr6:112635548-112635567 MsG0680035809.01.T01:CDS 35.0%
!!! CTCTCCACGAATTACTTTTT+AGG + Chr6:112635984-112636003 None:intergenic 35.0%
!!! GTTTTGATTTTAGCGCAAAG+TGG - Chr6:112636190-112636209 MsG0680035809.01.T01:CDS 35.0%
AACCAAGCACCTCAATCATT+TGG + Chr6:112636443-112636462 None:intergenic 40.0%
AACCTCTCCTCAGTTACATT+AGG + Chr6:112635772-112635791 None:intergenic 40.0%
AACTCGGTTTCAAAGAATCG+TGG - Chr6:112636298-112636317 MsG0680035809.01.T01:CDS 40.0%
ACACACCATCCATATAGACT+CGG + Chr6:112636053-112636072 None:intergenic 40.0%
ACCAAGCACCTCAATCATTT+GGG + Chr6:112636442-112636461 None:intergenic 40.0%
ACCTCTCCTCAGTTACATTA+GGG + Chr6:112635771-112635790 None:intergenic 40.0%
AGCTTGATTGTTTGGGTAGT+TGG + Chr6:112635718-112635737 None:intergenic 40.0%
ATATGGATGGTGTGTGTCAT+TGG - Chr6:112636058-112636077 MsG0680035809.01.T01:CDS 40.0%
ATCGTGGATCAAACTCTTCA+TGG - Chr6:112636314-112636333 MsG0680035809.01.T01:CDS 40.0%
GATACCAAACATTGTCCAAC+CGG + Chr6:112636111-112636130 None:intergenic 40.0%
GATGGAGAAGAAGAAATCAG+TGG - Chr6:112635288-112635307 MsG0680035809.01.T01:CDS 40.0%
GCTTGATTGTTTGGGTAGTT+GGG + Chr6:112635717-112635736 None:intergenic 40.0%
GTATTCTATGGAACGTAGAG+AGG - Chr6:112636023-112636042 MsG0680035809.01.T01:CDS 40.0%
GTGGAAGAAGCTTGATTGTT+TGG + Chr6:112635726-112635745 None:intergenic 40.0%
TAGCGCAAAGTGGATAAACT+TGG - Chr6:112636200-112636219 MsG0680035809.01.T01:CDS 40.0%
TGCACCTTCACATTGAGAAT+TGG + Chr6:112635488-112635507 None:intergenic 40.0%
TGGATCAAACTCTTCATGGT+TGG - Chr6:112636318-112636337 MsG0680035809.01.T01:CDS 40.0%
TGTTGACATGCCGTATTCTA+TGG - Chr6:112636011-112636030 MsG0680035809.01.T01:CDS 40.0%
! ACGGTTGATTCATAGTCACT+GGG + Chr6:112635748-112635767 None:intergenic 40.0%
!! GGAAAGCATTGTTCCATTTG+AGG - Chr6:112636506-112636525 MsG0680035809.01.T01:CDS 40.0%
AACCGTCCCTAATGTAACTG+AGG - Chr6:112635762-112635781 MsG0680035809.01.T01:CDS 45.0%
AACGCCCTTCTTCATGGATT+TGG - Chr6:112635808-112635827 MsG0680035809.01.T01:CDS 45.0%
CACACCATCCATATAGACTC+GGG + Chr6:112636052-112636071 None:intergenic 45.0%
CTCCTCAGTTACATTAGGGA+CGG + Chr6:112635767-112635786 None:intergenic 45.0%
GAAGGACACTTCATTGCTCA+AGG + Chr6:112636139-112636158 None:intergenic 45.0%
TCCCTAATGTAACTGAGGAG+AGG - Chr6:112635767-112635786 MsG0680035809.01.T01:CDS 45.0%
! ACCCAAATGATTGAGGTGCT+TGG - Chr6:112636438-112636457 MsG0680035809.01.T01:CDS 45.0%
! ATCATCTACTTCTGGGGGAA+TGG + Chr6:112636169-112636188 None:intergenic 45.0%
! GACGGTTGATTCATAGTCAC+TGG + Chr6:112635749-112635768 None:intergenic 45.0%
! GTTGATTCATAGTCACTGGG+TGG + Chr6:112635745-112635764 None:intergenic 45.0%
! TATGCCGGTTGGACAATGTT+TGG - Chr6:112636104-112636123 MsG0680035809.01.T01:CDS 45.0%
! TCATCTACTTCTGGGGGAAT+GGG + Chr6:112636168-112636187 None:intergenic 45.0%
!! TCCATGAAGAAGGGCGTTAA+CGG + Chr6:112635806-112635825 None:intergenic 45.0%
AGAGGGAACCCGAGTCTATA+TGG - Chr6:112636041-112636060 MsG0680035809.01.T01:CDS 50.0%
CCTTACGTTGAGCGTCCTAT+CGG - Chr6:112636348-112636367 MsG0680035809.01.T01:CDS 50.0%
GGAACCCGAGTCTATATGGA+TGG - Chr6:112636045-112636064 MsG0680035809.01.T01:CDS 50.0%
GGTTGCTGCAACGAGTGAAA+AGG - Chr6:112635309-112635328 MsG0680035809.01.T01:CDS 50.0%
TCCGTTAACGCCCTTCTTCA+TGG - Chr6:112635802-112635821 MsG0680035809.01.T01:CDS 50.0%
CCGATAGGACGCTCAACGTA+AGG + Chr6:112636351-112636370 None:intergenic 55.0%
CCTATCGGAGTGGGGACAAA+GGG - Chr6:112636363-112636382 MsG0680035809.01.T01:CDS 55.0%
CTATCGGAGTGGGGACAAAG+GGG - Chr6:112636364-112636383 MsG0680035809.01.T01:CDS 55.0%
GGACGCTCAACGTAAGGCAA+CGG + Chr6:112636345-112636364 None:intergenic 55.0%
GTTGAGCGTCCTATCGGAGT+GGG - Chr6:112636354-112636373 MsG0680035809.01.T01:CDS 55.0%
TCCTATCGGAGTGGGGACAA+AGG - Chr6:112636362-112636381 MsG0680035809.01.T01:CDS 55.0%
TTGAGCGTCCTATCGGAGTG+GGG - Chr6:112636355-112636374 MsG0680035809.01.T01:CDS 55.0%
! TGGGGGAATGGGTGTTGTGA+AGG + Chr6:112636157-112636176 None:intergenic 55.0%
CCCTTTGTCCCCACTCCGAT+AGG + Chr6:112636366-112636385 None:intergenic 60.0%
CGTTGAGCGTCCTATCGGAG+TGG - Chr6:112636353-112636372 MsG0680035809.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 112635244 112636533 112635244 ID=MsG0680035809.01;Name=MsG0680035809.01
Chr6 mRNA 112635244 112636533 112635244 ID=MsG0680035809.01.T01;Parent=MsG0680035809.01;Name=MsG0680035809.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|429
Chr6 exon 112635244 112636533 112635244 ID=MsG0680035809.01.T01:exon:9618;Parent=MsG0680035809.01.T01
Chr6 CDS 112635244 112636533 112635244 ID=MsG0680035809.01.T01:cds;Parent=MsG0680035809.01.T01
Gene Sequence

>MsG0680035809.01.T01

ATGAACACTCATCACAAGCGAATAAGCTCTTCTCATCTTGAATTGATGGAGAAGAAGAAATCAGTGGTTGCTGCAACGAGTGAAAAGGTGAGCACCACATATATATCCGATGATATTGCCTTCTCCATTCTCTCAAAATTACCTCTTAAATCTTTCAAGCGTTTTGAATGTGTTTGTAAATCATGGTATCTTTTATCTGAAAATCATCTCTTCATGAACATGTTCCGCTACAATTTCTTATCCAATTCTCAATGTGAAGGTGCATCTCCCCTGCTCTTTGTAATTGAAAACTATGAAGAAGTTTTGTATTCTTTTTCTGGTGAGAGGTTCGAGAATAAAATCAAATTAGATTTTTCAAATCCATTTGAAGAAGATAACTCTTTTTATATTGTTGGTTTTGGTAGTATTAATGGCACGCTTTGTCTCCATCTATATGAATATGGTAATTTTGGAAAAATTGTGCTGTGGAACCCAACTACCCAAACAATCAAGCTTCTTCCACCCAGTGACTATGAATCAACCGTCCCTAATGTAACTGAGGAGAGGTTTTTTGATATTTCCGTTAACGCCCTTCTTCATGGATTTGGTTATAACCATGTTACAAATGACTATAATGTCATTCGGCATGTAAAAGTGTTTATAAGACCAAATTCATCAACTGGTTACGATGGTAACTTCAAAGAAATTGTTTCTCATCGGTTTGGAGATATTAATTCACCAAAATGGGAGATATATAGCCTAAAAAGTAATTCGTGGAGAGAACTTGATGTTGACATGCCGTATTCTATGGAACGTAGAGAGGGAACCCGAGTCTATATGGATGGTGTGTGTCATTGGTTGTATAAACAATATAAAAAATATATGCCGGTTGGACAATGTTTGGTATCATTTTCCTTGAGCAATGAAGTGTCCTTCACAACACCCATTCCCCCAGAAGTAGATGATTGTTTTGATTTTAGCGCAAAGTGGATAAACTTGGCTGTGTTAAATGGATCCATAGCATTGATCTCATATCATATGAAGACGGCTACTTTTCATGTATCAATTTTGGGTCAACTCGGTTTCAAAGAATCGTGGATCAAACTCTTCATGGTTGGACCGTTGCCTTACGTTGAGCGTCCTATCGGAGTGGGGACAAAGGGGAAAATATTCTTCATAAGAAAAGATAATGAAGTGGCTTGGTTTGATTTAAGTACCCAAATGATTGAGGTGCTTGGTTATACAGCAAAGAGTTGTCATTTTCTTAGGATAATAAATTATAAGGAAAGCATTGTTCCATTTGAGGAATAA
Protein sequence

>MsG0680035809.01.T01

MNTHHKRISSSHLELMEKKKSVVAATSEKVSTTYISDDIAFSILSKLPLKSFKRFECVCKSWYLLSENHLFMNMFRYNFLSNSQCEGASPLLFVIENYEEVLYSFSGERFENKIKLDFSNPFEEDNSFYIVGFGSINGTLCLHLYEYGNFGKIVLWNPTTQTIKLLPPSDYESTVPNVTEERFFDISVNALLHGFGYNHVTNDYNVIRHVKVFIRPNSSTGYDGNFKEIVSHRFGDINSPKWEIYSLKSNSWRELDVDMPYSMERREGTRVYMDGVCHWLYKQYKKYMPVGQCLVSFSLSNEVSFTTPIPPEVDDCFDFSAKWINLAVLNGSIALISYHMKTATFHVSILGQLGFKESWIKLFMVGPLPYVERPIGVGTKGKIFFIRKDNEVAWFDLSTQMIEVLGYTAKSCHFLRIINYKESIVPFEE*