Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580028718.01.T01 | RHN56812.1 | 81.6 | 375 | 40 | 3 | 54 | 425 | 1 | 349 | 0 | 578 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580028718.01.T01 | Q8GXC7 | 23.059 | 425 | 234 | 19 | 20 | 410 | 39 | 404 | 2.96E-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580028718.01.T01 | A0A396HTY4 | 81.600 | 375 | 40 | 3 | 54 | 425 | 1 | 349 | 0.0 | 578 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0580028716.01 | MsG0580028718.01 | 0.830125 | 3.501851e-55 | 3.656206e-52 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580028718.01.T01 | MTR_5g076490 | 78.933 | 375 | 38 | 3 | 54 | 425 | 1 | 337 | 0.0 | 552 |
MsG0580028718.01.T01 | MTR_5g097680 | 61.712 | 444 | 135 | 10 | 1 | 425 | 1 | 428 | 4.13e-173 | 491 |
MsG0580028718.01.T01 | MTR_5g064700 | 61.140 | 386 | 115 | 12 | 56 | 424 | 1 | 368 | 2.07e-143 | 414 |
MsG0580028718.01.T01 | MTR_6g461660 | 55.581 | 430 | 153 | 12 | 2 | 425 | 4 | 401 | 4.85e-141 | 409 |
MsG0580028718.01.T01 | MTR_6g086825 | 49.771 | 436 | 169 | 16 | 6 | 424 | 58 | 460 | 1.47e-116 | 348 |
MsG0580028718.01.T01 | MTR_6g079770 | 48.157 | 434 | 194 | 12 | 1 | 422 | 1 | 415 | 2.86e-112 | 336 |
MsG0580028718.01.T01 | MTR_0134s0060 | 46.437 | 435 | 190 | 13 | 7 | 423 | 2 | 411 | 7.95e-112 | 335 |
MsG0580028718.01.T01 | MTR_6g090180 | 47.442 | 430 | 190 | 13 | 1 | 420 | 31 | 434 | 3.54e-109 | 328 |
MsG0580028718.01.T01 | MTR_6g079810 | 48.775 | 449 | 168 | 18 | 1 | 425 | 54 | 464 | 1.15e-107 | 326 |
MsG0580028718.01.T01 | MTR_5g094350 | 59.934 | 302 | 78 | 7 | 13 | 306 | 9 | 275 | 1.24e-106 | 317 |
MsG0580028718.01.T01 | MTR_0054s0100 | 46.544 | 434 | 196 | 13 | 1 | 424 | 1 | 408 | 1.39e-104 | 316 |
MsG0580028718.01.T01 | MTR_0054s0090 | 46.224 | 437 | 191 | 14 | 1 | 424 | 1 | 406 | 2.13e-104 | 315 |
MsG0580028718.01.T01 | MTR_6g478230 | 44.079 | 456 | 174 | 16 | 1 | 424 | 1 | 407 | 1.11e-102 | 311 |
MsG0580028718.01.T01 | MTR_0129s0070 | 45.708 | 431 | 192 | 14 | 1 | 424 | 1 | 396 | 7.01e-102 | 309 |
MsG0580028718.01.T01 | MTR_6g080680 | 46.154 | 429 | 180 | 11 | 1 | 418 | 1 | 389 | 9.26e-102 | 308 |
MsG0580028718.01.T01 | MTR_2g038680 | 45.287 | 435 | 198 | 14 | 3 | 423 | 2 | 410 | 3.09e-101 | 307 |
MsG0580028718.01.T01 | MTR_4g028510 | 46.560 | 436 | 179 | 19 | 6 | 424 | 4 | 402 | 6.54e-101 | 308 |
MsG0580028718.01.T01 | MTR_5g097330 | 45.139 | 432 | 189 | 11 | 7 | 424 | 6 | 403 | 7.90e-101 | 306 |
MsG0580028718.01.T01 | MTR_5g097220 | 47.059 | 442 | 182 | 17 | 1 | 424 | 1 | 408 | 2.12e-100 | 305 |
MsG0580028718.01.T01 | MTR_0129s0050 | 45.330 | 439 | 194 | 16 | 1 | 424 | 1 | 408 | 4.57e-99 | 302 |
MsG0580028718.01.T01 | MTR_2g021800 | 44.244 | 443 | 198 | 13 | 3 | 424 | 2 | 416 | 2.70e-96 | 295 |
MsG0580028718.01.T01 | MTR_0129s0120 | 44.651 | 430 | 196 | 14 | 1 | 423 | 1 | 395 | 6.44e-96 | 293 |
MsG0580028718.01.T01 | MTR_4g028680 | 45.266 | 433 | 187 | 16 | 6 | 424 | 4 | 400 | 8.03e-96 | 293 |
MsG0580028718.01.T01 | MTR_4g130330 | 44.496 | 427 | 182 | 15 | 14 | 424 | 4 | 391 | 8.56e-93 | 285 |
MsG0580028718.01.T01 | MTR_4g028660 | 42.989 | 435 | 185 | 17 | 6 | 420 | 4 | 395 | 7.83e-92 | 283 |
MsG0580028718.01.T01 | MTR_4g027450 | 42.989 | 435 | 185 | 17 | 6 | 420 | 4 | 395 | 7.83e-92 | 283 |
MsG0580028718.01.T01 | MTR_2g022000 | 44.342 | 433 | 193 | 12 | 3 | 415 | 2 | 406 | 1.27e-91 | 283 |
MsG0580028718.01.T01 | MTR_4g102410 | 44.091 | 440 | 193 | 16 | 1 | 422 | 44 | 448 | 6.07e-91 | 282 |
MsG0580028718.01.T01 | MTR_4g117550 | 41.514 | 436 | 180 | 15 | 1 | 424 | 1 | 373 | 6.20e-90 | 277 |
MsG0580028718.01.T01 | MTR_8g063440 | 43.823 | 429 | 183 | 16 | 7 | 424 | 2 | 383 | 1.34e-89 | 276 |
MsG0580028718.01.T01 | MTR_1g115205 | 55.862 | 290 | 66 | 8 | 1 | 285 | 17 | 249 | 6.94e-89 | 270 |
MsG0580028718.01.T01 | MTR_7g017040 | 44.009 | 434 | 194 | 14 | 4 | 425 | 3 | 399 | 1.07e-88 | 275 |
MsG0580028718.01.T01 | MTR_8g033140 | 41.372 | 452 | 203 | 14 | 1 | 424 | 1 | 418 | 4.94e-88 | 274 |
MsG0580028718.01.T01 | MTR_8g041270 | 44.598 | 435 | 191 | 16 | 7 | 424 | 5 | 406 | 1.38e-87 | 272 |
MsG0580028718.01.T01 | MTR_8g464770 | 43.614 | 415 | 181 | 12 | 11 | 418 | 6 | 374 | 5.01e-87 | 270 |
MsG0580028718.01.T01 | MTR_2g104340 | 43.880 | 433 | 188 | 17 | 7 | 424 | 4 | 396 | 1.37e-85 | 267 |
MsG0580028718.01.T01 | MTR_2g021950 | 42.431 | 436 | 192 | 16 | 1 | 420 | 1 | 393 | 1.48e-85 | 266 |
MsG0580028718.01.T01 | MTR_5g037680 | 42.691 | 431 | 170 | 16 | 12 | 418 | 3 | 380 | 1.64e-85 | 268 |
MsG0580028718.01.T01 | MTR_7g017130 | 41.763 | 431 | 207 | 16 | 3 | 425 | 4 | 398 | 1.21e-84 | 265 |
MsG0580028718.01.T01 | MTR_6g090250 | 42.786 | 402 | 202 | 13 | 35 | 419 | 29 | 419 | 1.48e-84 | 265 |
MsG0580028718.01.T01 | MTR_4g014370 | 40.312 | 449 | 195 | 14 | 8 | 424 | 2 | 409 | 1.64e-84 | 265 |
MsG0580028718.01.T01 | MTR_2g104280 | 41.458 | 439 | 191 | 17 | 12 | 425 | 9 | 406 | 2.39e-83 | 261 |
MsG0580028718.01.T01 | MTR_1g007450 | 42.788 | 416 | 187 | 14 | 9 | 410 | 4 | 382 | 2.54e-83 | 262 |
MsG0580028718.01.T01 | MTR_7g017170 | 41.176 | 442 | 206 | 16 | 3 | 425 | 4 | 410 | 3.03e-83 | 261 |
MsG0580028718.01.T01 | MTR_2g021770 | 40.230 | 435 | 208 | 14 | 10 | 424 | 5 | 407 | 1.08e-82 | 259 |
MsG0580028718.01.T01 | MTR_5g069390 | 40.227 | 440 | 195 | 17 | 11 | 424 | 20 | 417 | 4.78e-82 | 261 |
MsG0580028718.01.T01 | MTR_0831s0010 | 40.363 | 441 | 197 | 13 | 1 | 425 | 32 | 422 | 5.21e-82 | 258 |
MsG0580028718.01.T01 | MTR_8g064890 | 42.032 | 433 | 190 | 15 | 7 | 424 | 2 | 388 | 6.99e-82 | 257 |
MsG0580028718.01.T01 | MTR_3g011120 | 41.527 | 419 | 180 | 14 | 7 | 413 | 4 | 369 | 1.39e-81 | 256 |
MsG0580028718.01.T01 | MTR_5g059430 | 40.498 | 442 | 196 | 17 | 11 | 422 | 20 | 424 | 1.96e-81 | 257 |
MsG0580028718.01.T01 | MTR_5g096910 | 41.570 | 433 | 191 | 16 | 7 | 423 | 6 | 392 | 7.57e-81 | 254 |
MsG0580028718.01.T01 | MTR_1g053510 | 41.781 | 438 | 192 | 18 | 6 | 419 | 3 | 401 | 7.76e-81 | 255 |
MsG0580028718.01.T01 | MTR_4g028750 | 41.505 | 412 | 194 | 13 | 6 | 405 | 4 | 380 | 2.61e-80 | 253 |
MsG0580028718.01.T01 | MTR_8g046310 | 42.056 | 428 | 178 | 17 | 6 | 419 | 2 | 373 | 6.12e-80 | 251 |
MsG0580028718.01.T01 | MTR_2g066200 | 39.813 | 427 | 206 | 12 | 7 | 423 | 2 | 387 | 7.19e-80 | 252 |
MsG0580028718.01.T01 | MTR_8g012090 | 42.500 | 400 | 156 | 11 | 1 | 392 | 1 | 334 | 8.41e-80 | 250 |
MsG0580028718.01.T01 | MTR_4g055820 | 46.392 | 388 | 151 | 17 | 11 | 378 | 8 | 358 | 1.15e-79 | 250 |
MsG0580028718.01.T01 | MTR_2g065860 | 38.851 | 435 | 201 | 15 | 7 | 424 | 2 | 388 | 2.87e-79 | 250 |
MsG0580028718.01.T01 | MTR_2g065840 | 38.799 | 433 | 207 | 13 | 7 | 425 | 2 | 390 | 7.29e-79 | 249 |
MsG0580028718.01.T01 | MTR_8g033090 | 40.045 | 447 | 204 | 17 | 6 | 424 | 2 | 412 | 1.50e-78 | 249 |
MsG0580028718.01.T01 | MTR_8g467670 | 39.211 | 431 | 203 | 12 | 1 | 424 | 1 | 379 | 1.60e-78 | 248 |
MsG0580028718.01.T01 | MTR_7g069550 | 41.667 | 432 | 190 | 18 | 11 | 424 | 8 | 395 | 5.55e-78 | 247 |
MsG0580028718.01.T01 | MTR_2g034700 | 41.705 | 434 | 165 | 17 | 6 | 417 | 2 | 369 | 1.24e-77 | 246 |
MsG0580028718.01.T01 | MTR_6g079790 | 44.282 | 341 | 147 | 12 | 95 | 424 | 1 | 309 | 2.61e-77 | 243 |
MsG0580028718.01.T01 | MTR_5g096630 | 39.821 | 447 | 213 | 15 | 1 | 424 | 1 | 414 | 4.63e-76 | 243 |
MsG0580028718.01.T01 | MTR_2g066170 | 39.860 | 429 | 201 | 16 | 7 | 423 | 2 | 385 | 6.92e-76 | 241 |
MsG0580028718.01.T01 | MTR_8g046200 | 39.503 | 443 | 210 | 17 | 7 | 419 | 3 | 417 | 7.35e-76 | 243 |
MsG0580028718.01.T01 | MTR_5g092850 | 40.431 | 418 | 202 | 13 | 16 | 420 | 15 | 398 | 1.43e-75 | 241 |
MsG0580028718.01.T01 | MTR_8g046220 | 38.393 | 448 | 192 | 16 | 7 | 419 | 3 | 401 | 5.30e-75 | 240 |
MsG0580028718.01.T01 | MTR_1g007410 | 40.603 | 431 | 202 | 16 | 1 | 416 | 7 | 398 | 7.32e-75 | 239 |
MsG0580028718.01.T01 | MTR_8g018110 | 38.149 | 443 | 203 | 18 | 6 | 424 | 2 | 397 | 1.58e-74 | 238 |
MsG0580028718.01.T01 | MTR_7g111700 | 40.460 | 435 | 178 | 16 | 1 | 424 | 1 | 365 | 3.66e-73 | 234 |
MsG0580028718.01.T01 | MTR_5g097350 | 40.732 | 437 | 188 | 16 | 1 | 420 | 1 | 383 | 6.46e-73 | 234 |
MsG0580028718.01.T01 | MTR_6g078010 | 41.600 | 375 | 165 | 13 | 54 | 419 | 1 | 330 | 1.30e-72 | 232 |
MsG0580028718.01.T01 | MTR_5g074850 | 41.608 | 423 | 187 | 20 | 7 | 407 | 24 | 408 | 2.82e-72 | 244 |
MsG0580028718.01.T01 | MTR_5g091140 | 40.191 | 418 | 179 | 14 | 2 | 402 | 33 | 396 | 6.23e-72 | 232 |
MsG0580028718.01.T01 | MTR_8g033110 | 39.374 | 447 | 210 | 22 | 6 | 424 | 2 | 415 | 2.21e-70 | 228 |
MsG0580028718.01.T01 | MTR_2g066150 | 38.732 | 426 | 182 | 16 | 9 | 424 | 4 | 360 | 2.59e-70 | 226 |
MsG0580028718.01.T01 | MTR_5g024260 | 42.298 | 409 | 172 | 19 | 14 | 401 | 19 | 384 | 8.99e-70 | 226 |
MsG0580028718.01.T01 | MTR_1g098180 | 38.679 | 424 | 164 | 17 | 16 | 421 | 18 | 363 | 4.50e-69 | 223 |
MsG0580028718.01.T01 | MTR_5g092860 | 39.683 | 378 | 169 | 12 | 35 | 400 | 20 | 350 | 7.19e-68 | 220 |
MsG0580028718.01.T01 | MTR_7g104710 | 43.626 | 353 | 118 | 12 | 1 | 339 | 1 | 286 | 2.49e-67 | 217 |
MsG0580028718.01.T01 | MTR_6g087620 | 40.950 | 337 | 135 | 9 | 84 | 414 | 1 | 279 | 1.38e-66 | 214 |
MsG0580028718.01.T01 | MTR_7g079640 | 41.119 | 411 | 169 | 18 | 6 | 401 | 2 | 354 | 4.58e-66 | 216 |
MsG0580028718.01.T01 | MTR_5g075370 | 39.614 | 414 | 186 | 20 | 14 | 402 | 5 | 379 | 1.43e-65 | 224 |
MsG0580028718.01.T01 | MTR_8g039500 | 38.462 | 403 | 169 | 13 | 9 | 392 | 4 | 346 | 1.79e-65 | 213 |
MsG0580028718.01.T01 | MTR_8g032980 | 35.974 | 467 | 204 | 19 | 6 | 424 | 2 | 421 | 2.71e-65 | 215 |
MsG0580028718.01.T01 | MTR_1g007430 | 41.598 | 363 | 158 | 11 | 28 | 381 | 7 | 324 | 5.03e-64 | 209 |
MsG0580028718.01.T01 | MTR_5g043605 | 35.814 | 430 | 169 | 15 | 2 | 424 | 10 | 339 | 1.29e-63 | 209 |
MsG0580028718.01.T01 | MTR_7g016930 | 41.011 | 356 | 152 | 13 | 4 | 355 | 3 | 304 | 2.46e-61 | 202 |
MsG0580028718.01.T01 | MTR_5g096900 | 42.222 | 360 | 141 | 11 | 7 | 347 | 2 | 313 | 3.53e-61 | 201 |
MsG0580028718.01.T01 | MTR_4g007940 | 39.714 | 350 | 161 | 12 | 84 | 421 | 28 | 339 | 3.59e-60 | 199 |
MsG0580028718.01.T01 | MTR_5g022850 | 36.407 | 423 | 181 | 17 | 12 | 425 | 11 | 354 | 3.90e-60 | 199 |
MsG0580028718.01.T01 | MTR_8g063330 | 38.243 | 387 | 178 | 15 | 10 | 378 | 5 | 348 | 4.81e-59 | 200 |
MsG0580028718.01.T01 | MTR_5g072060 | 39.348 | 399 | 170 | 14 | 16 | 398 | 5 | 347 | 2.12e-58 | 202 |
MsG0580028718.01.T01 | MTR_6g090260 | 54.737 | 190 | 79 | 5 | 234 | 419 | 73 | 259 | 1.49e-57 | 190 |
MsG0580028718.01.T01 | MTR_6g090260 | 69.565 | 69 | 18 | 2 | 1 | 66 | 1 | 69 | 3.67e-19 | 87.0 |
MsG0580028718.01.T01 | MTR_5g074800 | 38.961 | 385 | 174 | 17 | 56 | 424 | 1 | 340 | 2.62e-57 | 192 |
MsG0580028718.01.T01 | MTR_2g064950 | 37.352 | 423 | 201 | 18 | 11 | 415 | 4 | 380 | 4.14e-56 | 190 |
MsG0580028718.01.T01 | MTR_8g013000 | 36.620 | 426 | 207 | 16 | 11 | 413 | 4 | 389 | 1.39e-55 | 189 |
MsG0580028718.01.T01 | MTR_6g004450 | 47.083 | 240 | 105 | 9 | 186 | 423 | 49 | 268 | 1.74e-52 | 177 |
MsG0580028718.01.T01 | MTR_2g021920 | 44.939 | 247 | 110 | 9 | 186 | 420 | 37 | 269 | 6.66e-52 | 175 |
MsG0580028718.01.T01 | MTR_7g023800 | 37.127 | 369 | 156 | 13 | 56 | 415 | 1 | 302 | 1.65e-51 | 176 |
MsG0580028718.01.T01 | MTR_8g063370 | 35.071 | 422 | 203 | 21 | 8 | 415 | 19 | 383 | 1.58e-50 | 176 |
MsG0580028718.01.T01 | MTR_5g023970 | 49.268 | 205 | 91 | 7 | 224 | 424 | 1 | 196 | 1.66e-48 | 164 |
MsG0580028718.01.T01 | MTR_1g050308 | 33.411 | 431 | 175 | 14 | 3 | 424 | 20 | 347 | 3.64e-47 | 165 |
MsG0580028718.01.T01 | MTR_3g018750 | 43.137 | 255 | 117 | 9 | 184 | 424 | 1 | 241 | 1.40e-46 | 160 |
MsG0580028718.01.T01 | MTR_6g070880 | 40.684 | 263 | 131 | 8 | 1 | 256 | 15 | 259 | 9.54e-46 | 159 |
MsG0580028718.01.T01 | MTR_6g071420 | 40.684 | 263 | 131 | 8 | 1 | 256 | 15 | 259 | 9.54e-46 | 159 |
MsG0580028718.01.T01 | MTR_5g086590 | 40.784 | 255 | 112 | 8 | 144 | 395 | 13 | 231 | 3.47e-45 | 157 |
MsG0580028718.01.T01 | MTR_8g033000 | 34.577 | 402 | 193 | 17 | 54 | 424 | 1 | 363 | 5.87e-45 | 160 |
MsG0580028718.01.T01 | MTR_6g465360 | 41.538 | 260 | 124 | 10 | 2 | 252 | 47 | 287 | 8.25e-45 | 157 |
MsG0580028718.01.T01 | MTR_5g068490 | 34.337 | 332 | 156 | 9 | 93 | 424 | 8 | 277 | 1.57e-44 | 156 |
MsG0580028718.01.T01 | MTR_4g014370 | 44.700 | 217 | 101 | 5 | 215 | 424 | 133 | 337 | 2.60e-44 | 157 |
MsG0580028718.01.T01 | MTR_4g014370 | 44.538 | 119 | 58 | 2 | 1 | 111 | 6 | 124 | 2.16e-20 | 92.0 |
MsG0580028718.01.T01 | MTR_8g063350 | 32.542 | 421 | 179 | 16 | 9 | 414 | 6 | 336 | 3.58e-43 | 154 |
MsG0580028718.01.T01 | MTR_8g035690 | 37.124 | 299 | 137 | 10 | 150 | 423 | 30 | 302 | 5.22e-43 | 153 |
MsG0580028718.01.T01 | MTR_5g097850 | 50.262 | 191 | 78 | 8 | 241 | 423 | 63 | 244 | 7.83e-43 | 151 |
MsG0580028718.01.T01 | MTR_1g076810 | 41.392 | 273 | 117 | 11 | 1 | 265 | 1 | 238 | 1.38e-42 | 159 |
MsG0580028718.01.T01 | MTR_6g079730 | 56.944 | 144 | 58 | 3 | 277 | 419 | 5 | 145 | 2.75e-42 | 146 |
MsG0580028718.01.T01 | MTR_1g050312 | 34.242 | 330 | 141 | 11 | 84 | 405 | 16 | 277 | 1.41e-40 | 146 |
MsG0580028718.01.T01 | MTR_3g030620 | 45.294 | 170 | 85 | 3 | 257 | 422 | 15 | 180 | 2.50e-40 | 142 |
MsG0580028718.01.T01 | MTR_8g063310 | 30.896 | 424 | 229 | 16 | 8 | 415 | 13 | 388 | 3.83e-40 | 148 |
MsG0580028718.01.T01 | MTR_8g036970 | 50.549 | 182 | 71 | 8 | 235 | 411 | 146 | 313 | 1.95e-38 | 142 |
MsG0580028718.01.T01 | MTR_8g036970 | 41.401 | 157 | 67 | 6 | 21 | 167 | 2 | 143 | 1.17e-22 | 99.0 |
MsG0580028718.01.T01 | MTR_5g098950 | 40.167 | 239 | 88 | 6 | 145 | 381 | 89 | 274 | 4.85e-37 | 136 |
MsG0580028718.01.T01 | MTR_5g097820 | 36.242 | 298 | 137 | 11 | 8 | 290 | 10 | 269 | 1.10e-36 | 135 |
MsG0580028718.01.T01 | MTR_2g104260 | 37.748 | 302 | 142 | 10 | 11 | 298 | 8 | 277 | 5.38e-36 | 134 |
MsG0580028718.01.T01 | MTR_6g009350 | 42.512 | 207 | 92 | 9 | 187 | 386 | 9 | 195 | 1.01e-35 | 130 |
MsG0580028718.01.T01 | MTR_5g037190 | 37.793 | 299 | 130 | 14 | 1 | 292 | 1 | 250 | 4.61e-35 | 130 |
MsG0580028718.01.T01 | MTR_4g016000 | 39.407 | 236 | 97 | 10 | 149 | 380 | 2 | 195 | 6.05e-35 | 129 |
MsG0580028718.01.T01 | MTR_8g064790 | 49.390 | 164 | 70 | 5 | 262 | 424 | 186 | 337 | 1.15e-34 | 132 |
MsG0580028718.01.T01 | MTR_8g064790 | 41.791 | 201 | 85 | 7 | 7 | 198 | 2 | 179 | 9.22e-32 | 124 |
MsG0580028718.01.T01 | MTR_5g066420 | 49.342 | 152 | 71 | 5 | 265 | 413 | 1 | 149 | 2.08e-34 | 125 |
MsG0580028718.01.T01 | MTR_7g017150 | 42.500 | 200 | 106 | 4 | 229 | 425 | 75 | 268 | 2.67e-34 | 129 |
MsG0580028718.01.T01 | MTR_7g017120 | 41.500 | 200 | 108 | 4 | 229 | 425 | 74 | 267 | 4.05e-33 | 125 |
MsG0580028718.01.T01 | MTR_7g019250 | 35.547 | 256 | 104 | 6 | 158 | 400 | 206 | 413 | 3.52e-31 | 124 |
MsG0580028718.01.T01 | MTR_8g073570 | 40.957 | 188 | 83 | 9 | 7 | 191 | 2 | 164 | 2.44e-29 | 112 |
MsG0580028718.01.T01 | MTR_5g097650 | 42.604 | 169 | 68 | 6 | 8 | 168 | 9 | 156 | 1.02e-27 | 108 |
MsG0580028718.01.T01 | MTR_5g096920 | 40.625 | 160 | 83 | 6 | 265 | 422 | 1 | 150 | 1.72e-27 | 107 |
MsG0580028718.01.T01 | MTR_2g022020 | 51.961 | 102 | 45 | 2 | 320 | 420 | 18 | 116 | 1.99e-24 | 97.8 |
MsG0580028718.01.T01 | MTR_5g097660 | 51.456 | 103 | 47 | 2 | 320 | 420 | 15 | 116 | 2.61e-24 | 97.4 |
MsG0580028718.01.T01 | MTR_5g097540 | 41.611 | 149 | 74 | 5 | 235 | 381 | 96 | 233 | 9.39e-24 | 100 |
MsG0580028718.01.T01 | MTR_5g036250 | 61.446 | 83 | 29 | 3 | 335 | 416 | 23 | 103 | 3.01e-23 | 96.7 |
MsG0580028718.01.T01 | MTR_4g133170 | 25.916 | 382 | 215 | 18 | 20 | 392 | 7 | 329 | 2.86e-22 | 98.2 |
MsG0580028718.01.T01 | MTR_3g019290 | 35.498 | 231 | 84 | 10 | 14 | 242 | 11 | 178 | 5.60e-22 | 92.8 |
MsG0580028718.01.T01 | MTR_5g096070 | 40.123 | 162 | 58 | 5 | 6 | 164 | 15 | 140 | 3.40e-21 | 90.1 |
MsG0580028718.01.T01 | MTR_4g094400 | 50.000 | 106 | 40 | 2 | 263 | 357 | 8 | 111 | 6.76e-21 | 88.6 |
MsG0580028718.01.T01 | MTR_7g101200 | 34.426 | 244 | 100 | 12 | 144 | 380 | 38 | 228 | 8.75e-21 | 91.3 |
MsG0580028718.01.T01 | MTR_1g047080 | 26.984 | 378 | 174 | 17 | 54 | 424 | 1 | 283 | 1.15e-19 | 89.0 |
MsG0580028718.01.T01 | MTR_8g041440 | 60.274 | 73 | 25 | 1 | 6 | 74 | 4 | 76 | 5.29e-19 | 82.8 |
MsG0580028718.01.T01 | MTR_0115s0020 | 26.218 | 431 | 240 | 20 | 20 | 420 | 13 | 395 | 6.96e-19 | 88.6 |
MsG0580028718.01.T01 | MTR_6g087660 | 69.697 | 66 | 19 | 1 | 1 | 65 | 1 | 66 | 7.07e-19 | 84.7 |
MsG0580028718.01.T01 | MTR_5g086780 | 43.902 | 123 | 58 | 3 | 282 | 399 | 112 | 228 | 1.02e-18 | 85.1 |
MsG0580028718.01.T01 | MTR_5g086780 | 72.222 | 54 | 15 | 0 | 3 | 56 | 2 | 55 | 6.23e-16 | 77.0 |
MsG0580028718.01.T01 | MTR_0667s0010 | 26.471 | 408 | 222 | 19 | 13 | 395 | 2 | 356 | 1.34e-18 | 87.8 |
MsG0580028718.01.T01 | MTR_4g116330 | 26.728 | 434 | 243 | 19 | 2 | 424 | 8 | 377 | 3.36e-17 | 83.2 |
MsG0580028718.01.T01 | MTR_2g031720 | 25.510 | 392 | 220 | 19 | 20 | 396 | 9 | 343 | 5.20e-17 | 82.8 |
MsG0580028718.01.T01 | MTR_2g031640 | 26.615 | 387 | 210 | 20 | 20 | 392 | 9 | 335 | 7.72e-17 | 82.0 |
MsG0580028718.01.T01 | MTR_1g068835 | 23.785 | 391 | 230 | 15 | 15 | 395 | 2 | 334 | 4.74e-16 | 79.7 |
MsG0580028718.01.T01 | MTR_2g425980 | 26.250 | 400 | 219 | 21 | 20 | 395 | 8 | 355 | 2.29e-15 | 77.8 |
MsG0580028718.01.T01 | MTR_4g023080 | 24.362 | 431 | 229 | 16 | 11 | 425 | 3 | 352 | 3.76e-15 | 76.6 |
MsG0580028718.01.T01 | MTR_3g047580 | 36.076 | 158 | 64 | 6 | 6 | 158 | 2 | 127 | 5.07e-15 | 72.0 |
MsG0580028718.01.T01 | MTR_7g079370 | 27.273 | 286 | 166 | 10 | 145 | 420 | 96 | 349 | 7.77e-15 | 75.9 |
MsG0580028718.01.T01 | MTR_0064s0160 | 25.467 | 428 | 243 | 23 | 16 | 418 | 41 | 417 | 8.62e-15 | 76.3 |
MsG0580028718.01.T01 | MTR_2g426070 | 25.000 | 388 | 231 | 17 | 25 | 396 | 14 | 357 | 9.16e-15 | 75.9 |
MsG0580028718.01.T01 | MTR_5g096050 | 56.098 | 82 | 32 | 3 | 286 | 366 | 30 | 108 | 1.02e-14 | 70.9 |
MsG0580028718.01.T01 | MTR_5g048160 | 25.935 | 428 | 244 | 20 | 20 | 420 | 7 | 388 | 1.12e-14 | 75.9 |
MsG0580028718.01.T01 | MTR_2g028160 | 25.708 | 424 | 248 | 21 | 20 | 419 | 8 | 388 | 1.20e-14 | 75.9 |
MsG0580028718.01.T01 | MTR_3g047540 | 52.113 | 71 | 28 | 3 | 235 | 304 | 5 | 70 | 1.32e-14 | 69.3 |
MsG0580028718.01.T01 | MTR_2g028130 | 24.816 | 407 | 226 | 20 | 20 | 395 | 8 | 365 | 1.81e-14 | 75.1 |
MsG0580028718.01.T01 | MTR_2g426090 | 24.870 | 386 | 231 | 18 | 25 | 396 | 14 | 354 | 7.40e-14 | 73.2 |
MsG0580028718.01.T01 | MTR_6g060650 | 24.263 | 441 | 235 | 16 | 11 | 424 | 2 | 370 | 1.02e-13 | 72.8 |
MsG0580028718.01.T01 | MTR_4g070550 | 24.515 | 412 | 251 | 18 | 20 | 411 | 8 | 379 | 2.50e-13 | 71.6 |
MsG0580028718.01.T01 | MTR_3g083010 | 23.433 | 367 | 219 | 16 | 20 | 369 | 9 | 330 | 2.51e-13 | 71.6 |
MsG0580028718.01.T01 | MTR_1g068860 | 24.872 | 390 | 219 | 17 | 20 | 395 | 7 | 336 | 3.00e-13 | 71.2 |
MsG0580028718.01.T01 | MTR_1g068875 | 25.320 | 391 | 213 | 20 | 20 | 395 | 7 | 333 | 3.59e-13 | 70.9 |
MsG0580028718.01.T01 | MTR_2g026010 | 25.743 | 303 | 177 | 16 | 140 | 425 | 100 | 371 | 3.60e-13 | 71.2 |
MsG0580028718.01.T01 | MTR_2g426020 | 26.513 | 347 | 196 | 16 | 20 | 357 | 9 | 305 | 6.44e-13 | 70.5 |
MsG0580028718.01.T01 | MTR_2g025420 | 23.645 | 406 | 237 | 19 | 20 | 395 | 9 | 371 | 4.71e-12 | 67.8 |
MsG0580028718.01.T01 | MTR_2g024100 | 23.333 | 330 | 206 | 14 | 32 | 357 | 22 | 308 | 5.04e-12 | 67.8 |
MsG0580028718.01.T01 | MTR_8g433040 | 22.172 | 442 | 238 | 15 | 2 | 422 | 3 | 359 | 1.35e-11 | 66.2 |
MsG0580028718.01.T01 | MTR_8g032380 | 22.172 | 442 | 238 | 15 | 2 | 422 | 3 | 359 | 1.35e-11 | 66.2 |
MsG0580028718.01.T01 | MTR_3g097190 | 53.704 | 54 | 24 | 1 | 344 | 396 | 28 | 81 | 2.66e-11 | 62.8 |
MsG0580028718.01.T01 | MTR_4g117770 | 23.239 | 426 | 241 | 15 | 16 | 425 | 10 | 365 | 2.67e-11 | 65.1 |
MsG0580028718.01.T01 | MTR_4g117810 | 23.239 | 426 | 241 | 15 | 16 | 425 | 10 | 365 | 2.67e-11 | 65.1 |
MsG0580028718.01.T01 | MTR_2g024110 | 21.090 | 422 | 246 | 17 | 20 | 419 | 7 | 363 | 2.78e-11 | 65.1 |
MsG0580028718.01.T01 | MTR_3g034130 | 22.274 | 431 | 236 | 19 | 12 | 414 | 4 | 363 | 4.02e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580028718.01.T01 | AT3G06240 | 23.059 | 425 | 234 | 19 | 20 | 410 | 39 | 404 | 3.02e-12 | 68.6 |
Find 92 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGCGTACATATGACTTTA+AGG | 0.175449 | 5:+85310763 | MsG0580028718.01.T01:CDS |
TGGATGTGGTAAATTTAATT+TGG | 0.204224 | 5:-85310477 | None:intergenic |
CCGTTCGCTGCAAATGTTAA+TGG | 0.225920 | 5:+85310689 | MsG0580028718.01.T01:CDS |
AATAAATCCATCTATGTCTA+TGG | 0.233226 | 5:-85311095 | None:intergenic |
CACTCAAGTCGTCAAGTTCA+TGG | 0.276234 | 5:+85310728 | MsG0580028718.01.T01:CDS |
CTCTAAAAGAGAATCAAATT+TGG | 0.290167 | 5:+85311027 | MsG0580028718.01.T01:CDS |
AGGTATCATTAGAACCCTTC+TGG | 0.305119 | 5:+85310876 | MsG0580028718.01.T01:CDS |
ATACATCAATAGAACGCTTC+TGG | 0.317328 | 5:+85310852 | MsG0580028718.01.T01:CDS |
AGTCGTCAAGTTCATGGATT+TGG | 0.330904 | 5:+85310734 | MsG0580028718.01.T01:CDS |
CGAAATTTAAGATTTCAAAA+TGG | 0.345845 | 5:-85310526 | None:intergenic |
AATCGCTTCAAAGATTTAAG+AGG | 0.361742 | 5:-85310278 | None:intergenic |
TCATGTGTCGAGTGTCCTTT+TGG | 0.369050 | 5:+85311277 | MsG0580028718.01.T01:CDS |
GGTAATATCATCGTGTATAT+AGG | 0.373242 | 5:-85310234 | None:intergenic |
CACCAAGGTCCTCAATCATA+TGG | 0.374536 | 5:-85311366 | None:intergenic |
CTGCTGTAAGATTTGCACTA+TGG | 0.385263 | 5:+85310612 | MsG0580028718.01.T01:CDS |
ATCGTATTCCCACATGTTGT+TGG | 0.388995 | 5:-85310950 | None:intergenic |
GTTTCAGTTCCTTCTTGAAA+TGG | 0.391484 | 5:-85310497 | None:intergenic |
ATGTAGACAATAAGTATTCA+TGG | 0.395776 | 5:+85311119 | MsG0580028718.01.T01:CDS |
TACTTATTTATTCCACCAAT+TGG | 0.396950 | 5:-85311445 | None:intergenic |
GGATCAAACTCTTCATTGTT+GGG | 0.398673 | 5:+85311248 | MsG0580028718.01.T01:CDS |
CTTGAATGGACTGTGTCATT+GGG | 0.401379 | 5:+85310982 | MsG0580028718.01.T01:CDS |
TCCATCTATGTCTATGGGTA+TGG | 0.405397 | 5:-85311089 | None:intergenic |
TGGATCAAACTCTTCATTGT+TGG | 0.415851 | 5:+85311247 | MsG0580028718.01.T01:CDS |
ACTTGAATGGACTGTGTCAT+TGG | 0.421413 | 5:+85310981 | MsG0580028718.01.T01:CDS |
CTTTAAGGTGATTAGTTATG+TGG | 0.424774 | 5:+85310778 | MsG0580028718.01.T01:CDS |
AAGGAAAACCTTCTTCCAAT+TGG | 0.426058 | 5:+85311430 | MsG0580028718.01.T01:CDS |
CACGGGGTAGACCTGACATA+TGG | 0.428435 | 5:+85310408 | MsG0580028718.01.T01:CDS |
CGCAAAGGTTATGTGGCATT+AGG | 0.434781 | 5:+85310827 | MsG0580028718.01.T01:CDS |
ATAGTTTAAGAAGTAACTCT+TGG | 0.438413 | 5:+85310906 | MsG0580028718.01.T01:CDS |
ACTTTGAATTCGTCCGTAGT+TGG | 0.440008 | 5:-85310638 | None:intergenic |
CCCATACCCATAGACATAGA+TGG | 0.443690 | 5:+85311088 | MsG0580028718.01.T01:CDS |
TACATCAATAGAACGCTTCT+GGG | 0.450365 | 5:+85310853 | MsG0580028718.01.T01:CDS |
TTGTTCTTGATATGTGATCA+AGG | 0.459685 | 5:-85311173 | None:intergenic |
TTGCCCTTTCCCACTCCAAA+AGG | 0.464318 | 5:-85311292 | None:intergenic |
CGGACCATGTTCATGAAAAG+AGG | 0.470721 | 5:-85310341 | None:intergenic |
TTGAATGCGTACGCAAATCA+TGG | 0.479527 | 5:+85310300 | MsG0580028718.01.T01:CDS |
TGCTACTGCCACAAATGAAA+AGG | 0.483250 | 5:+85310205 | MsG0580028718.01.T01:CDS |
TTTAAGTACCCATATGATTG+AGG | 0.484946 | 5:+85311357 | MsG0580028718.01.T01:CDS |
GATCACATATCAAGAACAAA+TGG | 0.488807 | 5:+85311177 | MsG0580028718.01.T01:CDS |
CAAAGTCATTCCTCATAGTC+CGG | 0.492741 | 5:+85310655 | MsG0580028718.01.T01:CDS |
GAAAACCTTCTTCCAATTGG+TGG | 0.494910 | 5:+85311433 | MsG0580028718.01.T01:CDS |
TTATTCCACCAATTGGAAGA+AGG | 0.496695 | 5:-85311438 | None:intergenic |
AATTAACTGTGAAGGAATCA+TGG | 0.499475 | 5:+85311227 | MsG0580028718.01.T01:CDS |
ACGATGGGAGTGTACTTGAA+TGG | 0.500005 | 5:+85310968 | MsG0580028718.01.T01:CDS |
GAGGACCTTGGTGTTAAAAG+TGG | 0.505868 | 5:+85311376 | MsG0580028718.01.T01:CDS |
TATATCTCTCATCTTATCAC+GGG | 0.506497 | 5:+85310391 | MsG0580028718.01.T01:CDS |
TTTGAGTGAATTAACTGTGA+AGG | 0.506731 | 5:+85311219 | MsG0580028718.01.T01:CDS |
GGTATCATTAGAACCCTTCT+GGG | 0.507446 | 5:+85310877 | MsG0580028718.01.T01:CDS |
CATAGTGCAAATCTTACAGC+AGG | 0.507506 | 5:-85310611 | None:intergenic |
TACATTCTCAAATCTTTCGC+CGG | 0.509200 | 5:-85310453 | None:intergenic |
GTTCCTTCTTGAAATGGATG+TGG | 0.527676 | 5:-85310491 | None:intergenic |
GTTTAAGAAGTAACTCTTGG+AGG | 0.529321 | 5:+85310909 | MsG0580028718.01.T01:CDS |
CTTTGCGTGGATTCAATCGT+GGG | 0.530835 | 5:-85310811 | None:intergenic |
CCATCTATGTCTATGGGTAT+GGG | 0.531881 | 5:-85311088 | None:intergenic |
TTGATATGTGATCAAGGCAA+TGG | 0.533113 | 5:-85311167 | None:intergenic |
TAAACTATATATCTCCCAGA+AGG | 0.534106 | 5:-85310891 | None:intergenic |
ACGGGGTAGACCTGACATAT+GGG | 0.536056 | 5:+85310409 | MsG0580028718.01.T01:CDS |
ATAAATCCATCTATGTCTAT+GGG | 0.540093 | 5:-85311094 | None:intergenic |
ATATATCTCTCATCTTATCA+CGG | 0.540680 | 5:+85310390 | MsG0580028718.01.T01:CDS |
CCATTAACATTTGCAGCGAA+CGG | 0.547358 | 5:-85310689 | None:intergenic |
ACCAAGGTCCTCAATCATAT+GGG | 0.548506 | 5:-85311365 | None:intergenic |
AAAACTCCCACCCATATGTC+AGG | 0.550990 | 5:-85310419 | None:intergenic |
CCTTTGCGTGGATTCAATCG+TGG | 0.557292 | 5:-85310812 | None:intergenic |
TGTCAGATAAGAAATTGTTA+CGG | 0.560156 | 5:-85310361 | None:intergenic |
GAATCCACGCAAAGGTTATG+TGG | 0.560830 | 5:+85310820 | MsG0580028718.01.T01:CDS |
TTACCACATCCATTTCAAGA+AGG | 0.563082 | 5:+85310488 | MsG0580028718.01.T01:CDS |
GTATTCATGGAGAGACTTGG+CGG | 0.565778 | 5:+85311132 | MsG0580028718.01.T01:CDS |
TTGAATGGACTGTGTCATTG+GGG | 0.572280 | 5:+85310983 | MsG0580028718.01.T01:CDS |
TGCACTATGGAATCCAACTA+CGG | 0.572611 | 5:+85310625 | MsG0580028718.01.T01:CDS |
TGAAACATATCCGGACTATG+AGG | 0.576466 | 5:-85310665 | None:intergenic |
TTGTCAGATAGTAGTGTACA+AGG | 0.585757 | 5:+85311411 | MsG0580028718.01.T01:CDS |
GCGAACGGTTGAAACATATC+CGG | 0.588476 | 5:-85310674 | None:intergenic |
TAAGTATTCATGGAGAGACT+TGG | 0.597902 | 5:+85311129 | MsG0580028718.01.T01:CDS |
TATGTCTATGGGTATGGGTG+TGG | 0.599534 | 5:-85311083 | None:intergenic |
AATGCCACATAACCTTTGCG+TGG | 0.605583 | 5:-85310824 | None:intergenic |
GTTAAAAGTGGAAATAGTTG+TGG | 0.621005 | 5:+85311388 | MsG0580028718.01.T01:CDS |
ACAACATGTGGGAATACGAT+GGG | 0.622217 | 5:+85310953 | MsG0580028718.01.T01:CDS |
ACCCATATGATTGAGGACCT+TGG | 0.628771 | 5:+85311364 | MsG0580028718.01.T01:CDS |
AACAACATGTGGGAATACGA+TGG | 0.634664 | 5:+85310952 | MsG0580028718.01.T01:CDS |
GGGTAGACCTGACATATGGG+TGG | 0.650130 | 5:+85310412 | MsG0580028718.01.T01:CDS |
AAACTATATATCTCCCAGAA+GGG | 0.651709 | 5:-85310890 | None:intergenic |
CCACGATTGAATCCACGCAA+AGG | 0.669835 | 5:+85310812 | MsG0580028718.01.T01:CDS |
CCTTAAAGTCATATGTACGC+AGG | 0.670924 | 5:-85310763 | None:intergenic |
GGTAGACCTGACATATGGGT+GGG | 0.672892 | 5:+85310413 | MsG0580028718.01.T01:CDS |
ATAAGATGAGAGATATATCG+TGG | 0.679943 | 5:-85310385 | None:intergenic |
GTTGTTATGCCAACAACATG+TGG | 0.680161 | 5:+85310941 | MsG0580028718.01.T01:CDS |
TTGTTATGCCAACAACATGT+GGG | 0.683967 | 5:+85310942 | MsG0580028718.01.T01:CDS |
TTTGCGTGGATTCAATCGTG+GGG | 0.691928 | 5:-85310810 | None:intergenic |
ATCAATAGAACGCTTCTGGG+AGG | 0.693716 | 5:+85310856 | MsG0580028718.01.T01:CDS |
TGAATGGACTGTGTCATTGG+GGG | 0.701339 | 5:+85310984 | MsG0580028718.01.T01:CDS |
GGACACTCGACACATGACAG+AGG | 0.703088 | 5:-85311271 | None:intergenic |
ATATCTCTCATCTTATCACG+GGG | 0.716109 | 5:+85310392 | MsG0580028718.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATTTTGAAATCTTAAATTT+CGG | + | Chr5:85310527-85310546 | MsG0580028718.01.T01:CDS | 15.0% |
!!! | CAATTTTGATAGAATTGAAA+AGG | - | Chr5:85310258-85310277 | None:intergenic | 20.0% |
!!! | CGAAATTTAAGATTTCAAAA+TGG | - | Chr5:85310529-85310548 | None:intergenic | 20.0% |
! | AATAAATCCATCTATGTCTA+TGG | - | Chr5:85311098-85311117 | None:intergenic | 25.0% |
! | ATAAATCCATCTATGTCTAT+GGG | - | Chr5:85311097-85311116 | None:intergenic | 25.0% |
! | ATAGTTTAAGAAGTAACTCT+TGG | + | Chr5:85310906-85310925 | MsG0580028718.01.T01:CDS | 25.0% |
! | ATATATCTCTCATCTTATCA+CGG | + | Chr5:85310390-85310409 | MsG0580028718.01.T01:CDS | 25.0% |
! | ATGTAGACAATAAGTATTCA+TGG | + | Chr5:85311119-85311138 | MsG0580028718.01.T01:CDS | 25.0% |
! | TACTTATTTATTCCACCAAT+TGG | - | Chr5:85311448-85311467 | None:intergenic | 25.0% |
! | TGGATGTGGTAAATTTAATT+TGG | - | Chr5:85310480-85310499 | None:intergenic | 25.0% |
! | TGTCAGATAAGAAATTGTTA+CGG | - | Chr5:85310364-85310383 | None:intergenic | 25.0% |
!! | CTCTAAAAGAGAATCAAATT+TGG | + | Chr5:85311027-85311046 | MsG0580028718.01.T01:CDS | 25.0% |
AAACTATATATCTCCCAGAA+GGG | - | Chr5:85310893-85310912 | None:intergenic | 30.0% | |
AATCGCTTCAAAGATTTAAG+AGG | - | Chr5:85310281-85310300 | None:intergenic | 30.0% | |
AATTAACTGTGAAGGAATCA+TGG | + | Chr5:85311227-85311246 | MsG0580028718.01.T01:CDS | 30.0% | |
ATAAGATGAGAGATATATCG+TGG | - | Chr5:85310388-85310407 | None:intergenic | 30.0% | |
GATCACATATCAAGAACAAA+TGG | + | Chr5:85311177-85311196 | MsG0580028718.01.T01:CDS | 30.0% | |
GGTAATATCATCGTGTATAT+AGG | - | Chr5:85310237-85310256 | None:intergenic | 30.0% | |
GTTAAAAGTGGAAATAGTTG+TGG | + | Chr5:85311388-85311407 | MsG0580028718.01.T01:CDS | 30.0% | |
TAAACTATATATCTCCCAGA+AGG | - | Chr5:85310894-85310913 | None:intergenic | 30.0% | |
TATATCTCTCATCTTATCAC+GGG | + | Chr5:85310391-85310410 | MsG0580028718.01.T01:CDS | 30.0% | |
TTGTTCTTGATATGTGATCA+AGG | - | Chr5:85311176-85311195 | None:intergenic | 30.0% | |
TTTAAGTACCCATATGATTG+AGG | + | Chr5:85311357-85311376 | MsG0580028718.01.T01:CDS | 30.0% | |
TTTGAGTGAATTAACTGTGA+AGG | + | Chr5:85311219-85311238 | MsG0580028718.01.T01:CDS | 30.0% | |
! | AAATCCTCTTTTCATGAACA+TGG | + | Chr5:85310337-85310356 | MsG0580028718.01.T01:CDS | 30.0% |
!! | CTTTAAGGTGATTAGTTATG+TGG | + | Chr5:85310778-85310797 | MsG0580028718.01.T01:CDS | 30.0% |
!! | TATTTCCACTTTTAACACCA+AGG | - | Chr5:85311384-85311403 | None:intergenic | 30.0% |
AAAAAGATGAAGAGCTAGCT+TGG | + | Chr5:85311329-85311348 | MsG0580028718.01.T01:CDS | 35.0% | |
AAGGAAAACCTTCTTCCAAT+TGG | + | Chr5:85311430-85311449 | MsG0580028718.01.T01:CDS | 35.0% | |
ATACATCAATAGAACGCTTC+TGG | + | Chr5:85310852-85310871 | MsG0580028718.01.T01:CDS | 35.0% | |
ATATCTCTCATCTTATCACG+GGG | + | Chr5:85310392-85310411 | MsG0580028718.01.T01:CDS | 35.0% | |
GGATCAAACTCTTCATTGTT+GGG | + | Chr5:85311248-85311267 | MsG0580028718.01.T01:CDS | 35.0% | |
GTTTAAGAAGTAACTCTTGG+AGG | + | Chr5:85310909-85310928 | MsG0580028718.01.T01:CDS | 35.0% | |
GTTTCAGTTCCTTCTTGAAA+TGG | - | Chr5:85310500-85310519 | None:intergenic | 35.0% | |
TAAGTATTCATGGAGAGACT+TGG | + | Chr5:85311129-85311148 | MsG0580028718.01.T01:CDS | 35.0% | |
TACATCAATAGAACGCTTCT+GGG | + | Chr5:85310853-85310872 | MsG0580028718.01.T01:CDS | 35.0% | |
TACATTCTCAAATCTTTCGC+CGG | - | Chr5:85310456-85310475 | None:intergenic | 35.0% | |
TGGATCAAACTCTTCATTGT+TGG | + | Chr5:85311247-85311266 | MsG0580028718.01.T01:CDS | 35.0% | |
TTACCACATCCATTTCAAGA+AGG | + | Chr5:85310488-85310507 | MsG0580028718.01.T01:CDS | 35.0% | |
TTATTCCACCAATTGGAAGA+AGG | - | Chr5:85311441-85311460 | None:intergenic | 35.0% | |
TTGATATGTGATCAAGGCAA+TGG | - | Chr5:85311170-85311189 | None:intergenic | 35.0% | |
TTGTCAGATAGTAGTGTACA+AGG | + | Chr5:85311411-85311430 | MsG0580028718.01.T01:CDS | 35.0% | |
TTGTTATGCCAACAACATGT+GGG | + | Chr5:85310942-85310961 | MsG0580028718.01.T01:CDS | 35.0% | |
!! | GGAGTTTTGTATTCTTTGTC+CGG | + | Chr5:85310434-85310453 | MsG0580028718.01.T01:CDS | 35.0% |
AACAACATGTGGGAATACGA+TGG | + | Chr5:85310952-85310971 | MsG0580028718.01.T01:CDS | 40.0% | |
ACAACATGTGGGAATACGAT+GGG | + | Chr5:85310953-85310972 | MsG0580028718.01.T01:CDS | 40.0% | |
ACCAAGGTCCTCAATCATAT+GGG | - | Chr5:85311368-85311387 | None:intergenic | 40.0% | |
ACTTTGAATTCGTCCGTAGT+TGG | - | Chr5:85310641-85310660 | None:intergenic | 40.0% | |
AGGTATCATTAGAACCCTTC+TGG | + | Chr5:85310876-85310895 | MsG0580028718.01.T01:CDS | 40.0% | |
AGTCGTCAAGTTCATGGATT+TGG | + | Chr5:85310734-85310753 | MsG0580028718.01.T01:CDS | 40.0% | |
ATCGTATTCCCACATGTTGT+TGG | - | Chr5:85310953-85310972 | None:intergenic | 40.0% | |
CAAAGTCATTCCTCATAGTC+CGG | + | Chr5:85310655-85310674 | MsG0580028718.01.T01:CDS | 40.0% | |
CATAGTGCAAATCTTACAGC+AGG | - | Chr5:85310614-85310633 | None:intergenic | 40.0% | |
CCATCTATGTCTATGGGTAT+GGG | - | Chr5:85311091-85311110 | None:intergenic | 40.0% | |
CCATTAACATTTGCAGCGAA+CGG | - | Chr5:85310692-85310711 | None:intergenic | 40.0% | |
CCTGCGTACATATGACTTTA+AGG | + | Chr5:85310763-85310782 | MsG0580028718.01.T01:CDS | 40.0% | |
CCTTAAAGTCATATGTACGC+AGG | - | Chr5:85310766-85310785 | None:intergenic | 40.0% | |
CTGCTGTAAGATTTGCACTA+TGG | + | Chr5:85310612-85310631 | MsG0580028718.01.T01:CDS | 40.0% | |
GAAAACCTTCTTCCAATTGG+TGG | + | Chr5:85311433-85311452 | MsG0580028718.01.T01:CDS | 40.0% | |
GGTATCATTAGAACCCTTCT+GGG | + | Chr5:85310877-85310896 | MsG0580028718.01.T01:CDS | 40.0% | |
GTTCCTTCTTGAAATGGATG+TGG | - | Chr5:85310494-85310513 | None:intergenic | 40.0% | |
GTTGTTATGCCAACAACATG+TGG | + | Chr5:85310941-85310960 | MsG0580028718.01.T01:CDS | 40.0% | |
TCCATCTATGTCTATGGGTA+TGG | - | Chr5:85311092-85311111 | None:intergenic | 40.0% | |
TGAAACATATCCGGACTATG+AGG | - | Chr5:85310668-85310687 | None:intergenic | 40.0% | |
TGCACTATGGAATCCAACTA+CGG | + | Chr5:85310625-85310644 | MsG0580028718.01.T01:CDS | 40.0% | |
TGCTACTGCCACAAATGAAA+AGG | + | Chr5:85310205-85310224 | MsG0580028718.01.T01:CDS | 40.0% | |
TTGAATGCGTACGCAAATCA+TGG | + | Chr5:85310300-85310319 | MsG0580028718.01.T01:CDS | 40.0% | |
! | TGTCATTGGGGGTGTATTAT+AGG | + | Chr5:85310995-85311014 | MsG0580028718.01.T01:CDS | 40.0% |
!! | ACTTGAATGGACTGTGTCAT+TGG | + | Chr5:85310981-85311000 | MsG0580028718.01.T01:CDS | 40.0% |
!! | CTTGAATGGACTGTGTCATT+GGG | + | Chr5:85310982-85311001 | MsG0580028718.01.T01:CDS | 40.0% |
!! | TTGAATGGACTGTGTCATTG+GGG | + | Chr5:85310983-85311002 | MsG0580028718.01.T01:CDS | 40.0% |
!!! | GGTACTGACCTTTTCATTTG+TGG | - | Chr5:85310216-85310235 | None:intergenic | 40.0% |
AAAACTCCCACCCATATGTC+AGG | - | Chr5:85310422-85310441 | None:intergenic | 45.0% | |
AATGCCACATAACCTTTGCG+TGG | - | Chr5:85310827-85310846 | None:intergenic | 45.0% | |
ACCCATATGATTGAGGACCT+TGG | + | Chr5:85311364-85311383 | MsG0580028718.01.T01:CDS | 45.0% | |
ATCAATAGAACGCTTCTGGG+AGG | + | Chr5:85310856-85310875 | MsG0580028718.01.T01:CDS | 45.0% | |
CACCAAGGTCCTCAATCATA+TGG | - | Chr5:85311369-85311388 | None:intergenic | 45.0% | |
CACTCAAGTCGTCAAGTTCA+TGG | + | Chr5:85310728-85310747 | MsG0580028718.01.T01:CDS | 45.0% | |
CCCATACCCATAGACATAGA+TGG | + | Chr5:85311088-85311107 | MsG0580028718.01.T01:CDS | 45.0% | |
CCGTTCGCTGCAAATGTTAA+TGG | + | Chr5:85310689-85310708 | MsG0580028718.01.T01:CDS | 45.0% | |
CGCAAAGGTTATGTGGCATT+AGG | + | Chr5:85310827-85310846 | MsG0580028718.01.T01:CDS | 45.0% | |
CGGACCATGTTCATGAAAAG+AGG | - | Chr5:85310344-85310363 | None:intergenic | 45.0% | |
CTTTGCGTGGATTCAATCGT+GGG | - | Chr5:85310814-85310833 | None:intergenic | 45.0% | |
GAATCCACGCAAAGGTTATG+TGG | + | Chr5:85310820-85310839 | MsG0580028718.01.T01:CDS | 45.0% | |
GCGAACGGTTGAAACATATC+CGG | - | Chr5:85310677-85310696 | None:intergenic | 45.0% | |
GTATTCATGGAGAGACTTGG+CGG | + | Chr5:85311132-85311151 | MsG0580028718.01.T01:CDS | 45.0% | |
TATGTCTATGGGTATGGGTG+TGG | - | Chr5:85311086-85311105 | None:intergenic | 45.0% | |
TTTGCGTGGATTCAATCGTG+GGG | - | Chr5:85310813-85310832 | None:intergenic | 45.0% | |
! | ACGATGGGAGTGTACTTGAA+TGG | + | Chr5:85310968-85310987 | MsG0580028718.01.T01:CDS | 45.0% |
! | TCATGTGTCGAGTGTCCTTT+TGG | + | Chr5:85311277-85311296 | MsG0580028718.01.T01:CDS | 45.0% |
!! | GAGGACCTTGGTGTTAAAAG+TGG | + | Chr5:85311376-85311395 | MsG0580028718.01.T01:CDS | 45.0% |
!! | TGAATGGACTGTGTCATTGG+GGG | + | Chr5:85310984-85311003 | MsG0580028718.01.T01:CDS | 45.0% |
!!! | TGTCCTTTTGGAGTGGGAAA+GGG | + | Chr5:85311289-85311308 | MsG0580028718.01.T01:CDS | 45.0% |
ACGGGGTAGACCTGACATAT+GGG | + | Chr5:85310409-85310428 | MsG0580028718.01.T01:CDS | 50.0% | |
CCACGATTGAATCCACGCAA+AGG | + | Chr5:85310812-85310831 | MsG0580028718.01.T01:CDS | 50.0% | |
CCTTTGCGTGGATTCAATCG+TGG | - | Chr5:85310815-85310834 | None:intergenic | 50.0% | |
GGTAGACCTGACATATGGGT+GGG | + | Chr5:85310413-85310432 | MsG0580028718.01.T01:CDS | 50.0% | |
TTGCCCTTTCCCACTCCAAA+AGG | - | Chr5:85311295-85311314 | None:intergenic | 50.0% | |
!! | TGTCGAGTGTCCTTTTGGAG+TGG | + | Chr5:85311282-85311301 | MsG0580028718.01.T01:CDS | 50.0% |
!!! | GTCGAGTGTCCTTTTGGAGT+GGG | + | Chr5:85311283-85311302 | MsG0580028718.01.T01:CDS | 50.0% |
!!! | GTGTCCTTTTGGAGTGGGAA+AGG | + | Chr5:85311288-85311307 | MsG0580028718.01.T01:CDS | 50.0% |
CACGGGGTAGACCTGACATA+TGG | + | Chr5:85310408-85310427 | MsG0580028718.01.T01:CDS | 55.0% | |
GGACACTCGACACATGACAG+AGG | - | Chr5:85311274-85311293 | None:intergenic | 55.0% | |
GGGTAGACCTGACATATGGG+TGG | + | Chr5:85310412-85310431 | MsG0580028718.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 85310191 | 85311468 | 85310191 | ID=MsG0580028718.01;Name=MsG0580028718.01 |
Chr5 | mRNA | 85310191 | 85311468 | 85310191 | ID=MsG0580028718.01.T01;Parent=MsG0580028718.01;Name=MsG0580028718.01.T01;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|425 |
Chr5 | exon | 85310191 | 85311468 | 85310191 | ID=MsG0580028718.01.T01:exon:29887;Parent=MsG0580028718.01.T01 |
Chr5 | CDS | 85310191 | 85311468 | 85310191 | ID=MsG0580028718.01.T01:cds;Parent=MsG0580028718.01.T01 |
Gene Sequence |
Protein sequence |