Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029989.01.T01 | GAU21654.1 | 53.125 | 384 | 134 | 9 | 25 | 383 | 20 | 382 | 1.74E-116 | 355 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029989.01.T01 | Q9LU24 | 26.335 | 281 | 144 | 10 | 22 | 296 | 1 | 224 | 9.23E-15 | 78.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029989.01.T01 | A0A2Z6LR58 | 53.125 | 384 | 134 | 9 | 25 | 383 | 20 | 382 | 8.33e-117 | 355 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029989.01.T01 | MTR_5g069390 | 46.517 | 402 | 182 | 10 | 1 | 384 | 1 | 387 | 2.69e-103 | 314 |
MsG0580029989.01.T01 | MTR_5g096910 | 49.618 | 393 | 150 | 15 | 5 | 383 | 3 | 361 | 7.69e-103 | 310 |
MsG0580029989.01.T01 | MTR_5g037680 | 49.867 | 377 | 149 | 11 | 23 | 384 | 5 | 356 | 2.78e-102 | 310 |
MsG0580029989.01.T01 | MTR_0129s0070 | 46.174 | 379 | 171 | 9 | 18 | 384 | 9 | 366 | 1.01e-101 | 307 |
MsG0580029989.01.T01 | MTR_5g059430 | 45.122 | 410 | 184 | 10 | 1 | 384 | 1 | 395 | 5.40e-100 | 303 |
MsG0580029989.01.T01 | MTR_0129s0120 | 45.526 | 380 | 174 | 9 | 16 | 383 | 7 | 365 | 9.74e-99 | 299 |
MsG0580029989.01.T01 | MTR_8g012090 | 46.717 | 396 | 134 | 12 | 3 | 383 | 1 | 334 | 2.98e-97 | 293 |
MsG0580029989.01.T01 | MTR_0054s0100 | 44.691 | 405 | 167 | 12 | 6 | 384 | 5 | 378 | 1.60e-94 | 289 |
MsG0580029989.01.T01 | MTR_0054s0090 | 45.103 | 388 | 166 | 10 | 21 | 384 | 12 | 376 | 6.77e-93 | 285 |
MsG0580029989.01.T01 | MTR_5g097330 | 45.573 | 384 | 169 | 11 | 20 | 384 | 10 | 372 | 5.55e-92 | 282 |
MsG0580029989.01.T01 | MTR_2g038680 | 44.221 | 398 | 160 | 11 | 21 | 384 | 11 | 380 | 9.09e-92 | 281 |
MsG0580029989.01.T01 | MTR_0134s0060 | 43.577 | 397 | 170 | 12 | 21 | 384 | 7 | 382 | 1.16e-89 | 276 |
MsG0580029989.01.T01 | MTR_6g086825 | 44.652 | 374 | 185 | 8 | 23 | 384 | 67 | 430 | 3.64e-89 | 276 |
MsG0580029989.01.T01 | MTR_2g022000 | 44.529 | 393 | 177 | 11 | 19 | 384 | 9 | 387 | 8.14e-89 | 275 |
MsG0580029989.01.T01 | MTR_8g063440 | 44.744 | 371 | 172 | 11 | 20 | 382 | 6 | 351 | 4.97e-87 | 269 |
MsG0580029989.01.T01 | MTR_5g086590 | 58.577 | 239 | 79 | 5 | 146 | 383 | 9 | 228 | 8.38e-87 | 263 |
MsG0580029989.01.T01 | MTR_6g080680 | 45.692 | 383 | 156 | 13 | 22 | 384 | 15 | 365 | 9.19e-87 | 268 |
MsG0580029989.01.T01 | MTR_2g021800 | 43.909 | 394 | 179 | 12 | 19 | 384 | 9 | 388 | 7.08e-86 | 267 |
MsG0580029989.01.T01 | MTR_6g079810 | 45.478 | 387 | 162 | 13 | 25 | 384 | 69 | 433 | 1.25e-85 | 268 |
MsG0580029989.01.T01 | MTR_5g097220 | 44.836 | 397 | 156 | 13 | 21 | 383 | 8 | 375 | 6.94e-84 | 261 |
MsG0580029989.01.T01 | MTR_5g096070 | 76.331 | 169 | 10 | 2 | 21 | 189 | 21 | 159 | 1.22e-83 | 252 |
MsG0580029989.01.T01 | MTR_6g090180 | 42.821 | 390 | 178 | 10 | 19 | 384 | 40 | 408 | 5.12e-83 | 260 |
MsG0580029989.01.T01 | MTR_5g097680 | 42.336 | 411 | 173 | 15 | 18 | 384 | 9 | 399 | 6.08e-83 | 259 |
MsG0580029989.01.T01 | MTR_2g021950 | 42.520 | 381 | 180 | 10 | 20 | 383 | 10 | 368 | 7.18e-83 | 258 |
MsG0580029989.01.T01 | MTR_3g011120 | 44.385 | 374 | 171 | 13 | 18 | 383 | 5 | 349 | 8.53e-83 | 257 |
MsG0580029989.01.T01 | MTR_6g079770 | 42.172 | 396 | 179 | 11 | 20 | 384 | 11 | 387 | 3.90e-82 | 257 |
MsG0580029989.01.T01 | MTR_6g461660 | 45.736 | 387 | 162 | 14 | 18 | 383 | 10 | 369 | 4.87e-82 | 256 |
MsG0580029989.01.T01 | MTR_8g464770 | 43.280 | 372 | 179 | 12 | 18 | 383 | 4 | 349 | 5.30e-82 | 255 |
MsG0580029989.01.T01 | MTR_7g017170 | 43.666 | 371 | 184 | 9 | 21 | 383 | 13 | 366 | 1.63e-81 | 255 |
MsG0580029989.01.T01 | MTR_7g017040 | 44.149 | 376 | 182 | 11 | 19 | 383 | 9 | 367 | 1.65e-81 | 255 |
MsG0580029989.01.T01 | MTR_7g017130 | 43.666 | 371 | 184 | 9 | 21 | 383 | 13 | 366 | 1.68e-81 | 255 |
MsG0580029989.01.T01 | MTR_5g096630 | 42.051 | 390 | 166 | 10 | 29 | 384 | 21 | 384 | 1.90e-81 | 255 |
MsG0580029989.01.T01 | MTR_4g028680 | 42.287 | 376 | 185 | 8 | 23 | 384 | 13 | 370 | 2.91e-81 | 254 |
MsG0580029989.01.T01 | MTR_4g130330 | 42.597 | 385 | 174 | 10 | 21 | 384 | 2 | 360 | 4.37e-81 | 254 |
MsG0580029989.01.T01 | MTR_4g117550 | 41.344 | 387 | 163 | 11 | 14 | 384 | 5 | 343 | 1.26e-80 | 252 |
MsG0580029989.01.T01 | MTR_4g102410 | 42.377 | 387 | 185 | 13 | 18 | 384 | 52 | 420 | 1.95e-80 | 254 |
MsG0580029989.01.T01 | MTR_4g028660 | 40.691 | 376 | 190 | 7 | 23 | 384 | 13 | 369 | 5.51e-80 | 251 |
MsG0580029989.01.T01 | MTR_4g027450 | 40.691 | 376 | 190 | 7 | 23 | 384 | 13 | 369 | 5.51e-80 | 251 |
MsG0580029989.01.T01 | MTR_4g028510 | 41.361 | 382 | 176 | 9 | 26 | 384 | 16 | 372 | 5.71e-80 | 253 |
MsG0580029989.01.T01 | MTR_4g055820 | 42.473 | 372 | 175 | 11 | 18 | 369 | 6 | 358 | 4.85e-79 | 247 |
MsG0580029989.01.T01 | MTR_2g021770 | 39.541 | 392 | 192 | 13 | 18 | 383 | 4 | 376 | 2.98e-78 | 247 |
MsG0580029989.01.T01 | MTR_4g028750 | 40.897 | 379 | 184 | 10 | 23 | 384 | 13 | 368 | 1.37e-77 | 245 |
MsG0580029989.01.T01 | MTR_6g478230 | 40.806 | 397 | 192 | 11 | 5 | 384 | 7 | 377 | 6.41e-77 | 244 |
MsG0580029989.01.T01 | MTR_1g007410 | 40.831 | 409 | 182 | 12 | 3 | 384 | 1 | 376 | 9.90e-77 | 243 |
MsG0580029989.01.T01 | MTR_5g097350 | 43.280 | 372 | 179 | 8 | 21 | 384 | 11 | 358 | 1.06e-76 | 242 |
MsG0580029989.01.T01 | MTR_0831s0010 | 40.561 | 392 | 182 | 11 | 7 | 384 | 37 | 391 | 3.52e-76 | 242 |
MsG0580029989.01.T01 | MTR_1g007450 | 42.820 | 383 | 182 | 12 | 18 | 383 | 3 | 365 | 1.68e-75 | 240 |
MsG0580029989.01.T01 | MTR_0129s0050 | 39.949 | 393 | 188 | 9 | 19 | 384 | 7 | 378 | 2.37e-75 | 239 |
MsG0580029989.01.T01 | MTR_7g079640 | 41.270 | 378 | 181 | 12 | 14 | 383 | 1 | 345 | 2.82e-75 | 238 |
MsG0580029989.01.T01 | MTR_7g069550 | 39.323 | 384 | 191 | 11 | 21 | 384 | 9 | 370 | 8.51e-75 | 238 |
MsG0580029989.01.T01 | MTR_2g065860 | 41.299 | 385 | 176 | 12 | 18 | 383 | 4 | 357 | 2.16e-74 | 236 |
MsG0580029989.01.T01 | MTR_8g046310 | 40.155 | 386 | 184 | 13 | 7 | 384 | 2 | 348 | 2.56e-74 | 236 |
MsG0580029989.01.T01 | MTR_8g039500 | 42.432 | 370 | 180 | 11 | 19 | 383 | 5 | 346 | 6.67e-74 | 234 |
MsG0580029989.01.T01 | MTR_5g096900 | 48.358 | 335 | 127 | 12 | 21 | 337 | 7 | 313 | 6.88e-74 | 233 |
MsG0580029989.01.T01 | MTR_2g066200 | 40.751 | 373 | 193 | 12 | 19 | 383 | 5 | 357 | 1.69e-72 | 231 |
MsG0580029989.01.T01 | MTR_5g074850 | 40.554 | 397 | 171 | 15 | 21 | 384 | 30 | 394 | 2.53e-71 | 240 |
MsG0580029989.01.T01 | MTR_2g104340 | 41.282 | 390 | 172 | 17 | 21 | 384 | 9 | 367 | 6.72e-71 | 228 |
MsG0580029989.01.T01 | MTR_4g014370 | 38.250 | 400 | 191 | 9 | 18 | 384 | 3 | 379 | 1.25e-70 | 227 |
MsG0580029989.01.T01 | MTR_8g041270 | 40.704 | 398 | 176 | 14 | 19 | 384 | 8 | 377 | 2.43e-69 | 224 |
MsG0580029989.01.T01 | MTR_2g066170 | 39.578 | 379 | 187 | 13 | 19 | 383 | 5 | 355 | 4.44e-69 | 223 |
MsG0580029989.01.T01 | MTR_1g007430 | 41.926 | 353 | 159 | 11 | 36 | 374 | 6 | 326 | 5.66e-69 | 220 |
MsG0580029989.01.T01 | MTR_2g034700 | 40.164 | 366 | 183 | 9 | 23 | 383 | 11 | 345 | 1.45e-68 | 221 |
MsG0580029989.01.T01 | MTR_5g075370 | 40.152 | 396 | 173 | 15 | 23 | 384 | 5 | 370 | 7.78e-68 | 229 |
MsG0580029989.01.T01 | MTR_2g104280 | 39.848 | 394 | 181 | 15 | 21 | 384 | 9 | 376 | 8.50e-68 | 220 |
MsG0580029989.01.T01 | MTR_5g092850 | 39.583 | 384 | 180 | 14 | 25 | 384 | 15 | 370 | 1.54e-67 | 219 |
MsG0580029989.01.T01 | MTR_7g111700 | 39.370 | 381 | 156 | 10 | 23 | 384 | 12 | 336 | 3.36e-67 | 217 |
MsG0580029989.01.T01 | MTR_2g065840 | 40.838 | 382 | 180 | 14 | 19 | 383 | 4 | 356 | 1.43e-66 | 216 |
MsG0580029989.01.T01 | MTR_1g053510 | 38.592 | 412 | 185 | 12 | 5 | 384 | 1 | 376 | 1.51e-66 | 216 |
MsG0580029989.01.T01 | MTR_5g097850 | 49.438 | 267 | 62 | 8 | 129 | 383 | 10 | 215 | 1.60e-66 | 211 |
MsG0580029989.01.T01 | MTR_6g090250 | 39.633 | 381 | 171 | 12 | 44 | 382 | 29 | 392 | 3.01e-66 | 216 |
MsG0580029989.01.T01 | MTR_8g063330 | 39.945 | 363 | 169 | 12 | 23 | 365 | 11 | 344 | 3.32e-66 | 218 |
MsG0580029989.01.T01 | MTR_2g066150 | 39.842 | 379 | 160 | 15 | 19 | 383 | 5 | 329 | 3.55e-66 | 214 |
MsG0580029989.01.T01 | MTR_2g064950 | 38.182 | 385 | 188 | 11 | 21 | 384 | 5 | 360 | 4.80e-66 | 215 |
MsG0580029989.01.T01 | MTR_8g064890 | 39.467 | 375 | 183 | 14 | 24 | 384 | 14 | 358 | 5.70e-66 | 214 |
MsG0580029989.01.T01 | MTR_5g091140 | 37.405 | 393 | 200 | 11 | 5 | 384 | 27 | 386 | 9.79e-66 | 215 |
MsG0580029989.01.T01 | MTR_8g033140 | 37.406 | 401 | 185 | 10 | 22 | 384 | 15 | 387 | 1.16e-65 | 214 |
MsG0580029989.01.T01 | MTR_8g013000 | 39.467 | 375 | 180 | 11 | 20 | 372 | 4 | 353 | 1.45e-64 | 211 |
MsG0580029989.01.T01 | MTR_5g096050 | 90.909 | 110 | 9 | 1 | 248 | 357 | 1 | 109 | 2.04e-64 | 201 |
MsG0580029989.01.T01 | MTR_8g046220 | 37.685 | 406 | 180 | 11 | 16 | 384 | 7 | 376 | 4.87e-64 | 210 |
MsG0580029989.01.T01 | MTR_5g072060 | 38.320 | 381 | 173 | 11 | 24 | 384 | 4 | 342 | 5.14e-64 | 215 |
MsG0580029989.01.T01 | MTR_8g467670 | 36.533 | 375 | 201 | 11 | 16 | 383 | 4 | 348 | 1.01e-63 | 209 |
MsG0580029989.01.T01 | MTR_5g024260 | 39.259 | 405 | 194 | 18 | 1 | 383 | 1 | 375 | 1.20e-63 | 209 |
MsG0580029989.01.T01 | MTR_5g064700 | 38.527 | 353 | 171 | 12 | 65 | 384 | 1 | 340 | 2.54e-62 | 204 |
MsG0580029989.01.T01 | MTR_8g032980 | 38.832 | 394 | 192 | 11 | 24 | 384 | 14 | 391 | 1.90e-61 | 204 |
MsG0580029989.01.T01 | MTR_8g033090 | 38.191 | 398 | 184 | 12 | 23 | 384 | 11 | 382 | 2.30e-61 | 203 |
MsG0580029989.01.T01 | MTR_7g016930 | 40.443 | 361 | 166 | 12 | 21 | 372 | 11 | 331 | 3.08e-61 | 201 |
MsG0580029989.01.T01 | MTR_8g046200 | 37.408 | 409 | 178 | 11 | 24 | 384 | 14 | 392 | 3.10e-61 | 203 |
MsG0580029989.01.T01 | MTR_6g078010 | 40.237 | 338 | 153 | 11 | 63 | 384 | 1 | 305 | 8.18e-59 | 194 |
MsG0580029989.01.T01 | MTR_8g036970 | 37.673 | 361 | 148 | 11 | 30 | 383 | 2 | 292 | 4.48e-58 | 193 |
MsG0580029989.01.T01 | MTR_8g018110 | 35.468 | 406 | 169 | 13 | 23 | 384 | 11 | 367 | 5.26e-57 | 191 |
MsG0580029989.01.T01 | MTR_8g033110 | 36.000 | 400 | 193 | 12 | 23 | 384 | 11 | 385 | 6.79e-57 | 192 |
MsG0580029989.01.T01 | MTR_4g007940 | 39.577 | 331 | 158 | 10 | 75 | 384 | 3 | 312 | 8.23e-57 | 189 |
MsG0580029989.01.T01 | MTR_7g104710 | 42.540 | 315 | 133 | 12 | 22 | 329 | 13 | 286 | 1.73e-56 | 187 |
MsG0580029989.01.T01 | MTR_5g097820 | 44.358 | 257 | 125 | 8 | 5 | 254 | 8 | 253 | 5.58e-56 | 185 |
MsG0580029989.01.T01 | MTR_5g092860 | 37.602 | 367 | 158 | 13 | 44 | 383 | 20 | 342 | 4.36e-54 | 183 |
MsG0580029989.01.T01 | MTR_4g014370 | 35.753 | 372 | 156 | 9 | 18 | 384 | 14 | 307 | 1.03e-53 | 181 |
MsG0580029989.01.T01 | MTR_5g074800 | 36.416 | 346 | 163 | 11 | 65 | 384 | 1 | 315 | 1.90e-53 | 181 |
MsG0580029989.01.T01 | MTR_8g064790 | 35.967 | 367 | 157 | 12 | 24 | 384 | 13 | 307 | 4.28e-53 | 179 |
MsG0580029989.01.T01 | MTR_1g098180 | 35.200 | 375 | 174 | 12 | 23 | 383 | 16 | 335 | 1.26e-51 | 176 |
MsG0580029989.01.T01 | MTR_1g050312 | 39.404 | 302 | 136 | 11 | 88 | 383 | 4 | 264 | 1.36e-50 | 171 |
MsG0580029989.01.T01 | MTR_6g079790 | 39.373 | 287 | 151 | 7 | 112 | 384 | 2 | 279 | 1.26e-49 | 169 |
MsG0580029989.01.T01 | MTR_5g022850 | 32.732 | 388 | 173 | 13 | 16 | 384 | 6 | 324 | 3.03e-46 | 162 |
MsG0580029989.01.T01 | MTR_5g043605 | 37.586 | 290 | 149 | 12 | 101 | 383 | 45 | 309 | 6.17e-46 | 161 |
MsG0580029989.01.T01 | MTR_7g023800 | 37.730 | 326 | 152 | 13 | 65 | 384 | 1 | 281 | 7.68e-46 | 159 |
MsG0580029989.01.T01 | MTR_5g094350 | 39.456 | 294 | 128 | 10 | 22 | 295 | 9 | 272 | 2.20e-45 | 157 |
MsG0580029989.01.T01 | MTR_5g068490 | 39.051 | 274 | 132 | 12 | 110 | 383 | 9 | 247 | 2.66e-45 | 157 |
MsG0580029989.01.T01 | MTR_6g087620 | 37.966 | 295 | 136 | 10 | 100 | 384 | 1 | 258 | 2.51e-44 | 155 |
MsG0580029989.01.T01 | MTR_6g070880 | 39.300 | 257 | 116 | 10 | 6 | 232 | 9 | 255 | 3.36e-44 | 154 |
MsG0580029989.01.T01 | MTR_6g071420 | 39.300 | 257 | 116 | 10 | 6 | 232 | 9 | 255 | 3.36e-44 | 154 |
MsG0580029989.01.T01 | MTR_8g063370 | 33.947 | 380 | 190 | 18 | 24 | 383 | 22 | 360 | 6.20e-44 | 157 |
MsG0580029989.01.T01 | MTR_1g076810 | 42.915 | 247 | 119 | 8 | 14 | 249 | 6 | 241 | 4.62e-43 | 159 |
MsG0580029989.01.T01 | MTR_2g021920 | 42.411 | 224 | 94 | 6 | 180 | 383 | 36 | 244 | 4.64e-42 | 149 |
MsG0580029989.01.T01 | MTR_5g023970 | 47.120 | 191 | 75 | 6 | 194 | 384 | 1 | 165 | 1.67e-41 | 145 |
MsG0580029989.01.T01 | MTR_6g465360 | 45.685 | 197 | 77 | 8 | 21 | 198 | 57 | 242 | 3.04e-41 | 147 |
MsG0580029989.01.T01 | MTR_5g076490 | 37.752 | 347 | 149 | 14 | 63 | 384 | 1 | 305 | 6.75e-41 | 147 |
MsG0580029989.01.T01 | MTR_6g090260 | 47.399 | 173 | 80 | 2 | 212 | 384 | 71 | 232 | 7.60e-41 | 145 |
MsG0580029989.01.T01 | MTR_6g090260 | 66.000 | 50 | 17 | 0 | 23 | 72 | 17 | 66 | 5.14e-12 | 65.9 |
MsG0580029989.01.T01 | MTR_5g066420 | 56.115 | 139 | 50 | 4 | 248 | 384 | 1 | 130 | 9.64e-41 | 141 |
MsG0580029989.01.T01 | MTR_6g004450 | 43.256 | 215 | 93 | 8 | 178 | 384 | 46 | 239 | 1.07e-40 | 145 |
MsG0580029989.01.T01 | MTR_8g063350 | 31.675 | 382 | 160 | 17 | 25 | 384 | 13 | 315 | 6.14e-40 | 145 |
MsG0580029989.01.T01 | MTR_8g063310 | 31.300 | 377 | 220 | 14 | 20 | 383 | 16 | 366 | 7.52e-39 | 144 |
MsG0580029989.01.T01 | MTR_8g033000 | 33.962 | 371 | 158 | 15 | 63 | 384 | 1 | 333 | 1.67e-38 | 142 |
MsG0580029989.01.T01 | MTR_5g037190 | 43.396 | 212 | 104 | 7 | 21 | 220 | 11 | 218 | 4.25e-38 | 137 |
MsG0580029989.01.T01 | MTR_5g096920 | 53.623 | 138 | 47 | 3 | 248 | 384 | 1 | 122 | 5.20e-38 | 134 |
MsG0580029989.01.T01 | MTR_5g097650 | 53.425 | 146 | 52 | 4 | 23 | 167 | 19 | 149 | 1.40e-37 | 133 |
MsG0580029989.01.T01 | MTR_5g097540 | 50.943 | 159 | 56 | 4 | 215 | 372 | 96 | 233 | 4.35e-37 | 136 |
MsG0580029989.01.T01 | MTR_3g018750 | 39.450 | 218 | 105 | 7 | 181 | 383 | 3 | 208 | 8.58e-36 | 131 |
MsG0580029989.01.T01 | MTR_5g098950 | 40.088 | 227 | 88 | 7 | 152 | 372 | 90 | 274 | 1.00e-35 | 132 |
MsG0580029989.01.T01 | MTR_2g104260 | 36.426 | 291 | 142 | 11 | 21 | 290 | 9 | 277 | 2.42e-35 | 131 |
MsG0580029989.01.T01 | MTR_8g073570 | 43.860 | 171 | 86 | 4 | 24 | 192 | 8 | 170 | 5.14e-35 | 127 |
MsG0580029989.01.T01 | MTR_6g009350 | 42.424 | 198 | 97 | 6 | 184 | 377 | 11 | 195 | 1.02e-34 | 127 |
MsG0580029989.01.T01 | MTR_1g050308 | 39.450 | 218 | 125 | 5 | 19 | 235 | 27 | 238 | 9.23e-34 | 129 |
MsG0580029989.01.T01 | MTR_1g050308 | 52.500 | 80 | 36 | 1 | 306 | 383 | 240 | 319 | 4.25e-16 | 79.3 |
MsG0580029989.01.T01 | MTR_4g016000 | 39.189 | 222 | 96 | 7 | 155 | 367 | 2 | 193 | 1.48e-33 | 124 |
MsG0580029989.01.T01 | MTR_7g019250 | 34.981 | 263 | 131 | 6 | 131 | 384 | 175 | 406 | 2.74e-33 | 129 |
MsG0580029989.01.T01 | MTR_5g097660 | 73.750 | 80 | 20 | 1 | 306 | 384 | 11 | 90 | 5.48e-32 | 117 |
MsG0580029989.01.T01 | MTR_1g115205 | 36.250 | 240 | 111 | 8 | 26 | 255 | 29 | 236 | 9.43e-30 | 115 |
MsG0580029989.01.T01 | MTR_6g079730 | 53.704 | 108 | 50 | 0 | 277 | 384 | 13 | 120 | 3.42e-29 | 110 |
MsG0580029989.01.T01 | MTR_5g086780 | 53.774 | 106 | 46 | 1 | 279 | 384 | 120 | 222 | 1.76e-28 | 111 |
MsG0580029989.01.T01 | MTR_5g086780 | 64.286 | 56 | 16 | 2 | 18 | 69 | 7 | 62 | 1.15e-13 | 70.5 |
MsG0580029989.01.T01 | MTR_8g035690 | 34.457 | 267 | 114 | 10 | 156 | 384 | 30 | 273 | 2.19e-28 | 113 |
MsG0580029989.01.T01 | MTR_5g091150 | 38.197 | 233 | 74 | 10 | 112 | 322 | 2 | 186 | 1.18e-27 | 108 |
MsG0580029989.01.T01 | MTR_5g049560 | 41.566 | 166 | 82 | 6 | 63 | 215 | 1 | 164 | 5.66e-26 | 105 |
MsG0580029989.01.T01 | MTR_3g019290 | 36.842 | 209 | 84 | 7 | 23 | 223 | 11 | 179 | 1.40e-24 | 99.8 |
MsG0580029989.01.T01 | MTR_1g047080 | 33.716 | 261 | 124 | 12 | 63 | 315 | 1 | 220 | 1.78e-24 | 102 |
MsG0580029989.01.T01 | MTR_5g036250 | 64.000 | 75 | 27 | 0 | 310 | 384 | 8 | 82 | 2.44e-24 | 99.0 |
MsG0580029989.01.T01 | MTR_8g041440 | 55.670 | 97 | 23 | 1 | 21 | 117 | 10 | 86 | 3.24e-24 | 96.7 |
MsG0580029989.01.T01 | MTR_7g101200 | 33.333 | 231 | 116 | 9 | 144 | 371 | 33 | 228 | 3.48e-24 | 100 |
MsG0580029989.01.T01 | MTR_3g030620 | 37.423 | 163 | 78 | 4 | 230 | 384 | 5 | 151 | 1.56e-23 | 96.7 |
MsG0580029989.01.T01 | MTR_7g017150 | 41.875 | 160 | 79 | 4 | 204 | 363 | 70 | 215 | 6.02e-23 | 97.4 |
MsG0580029989.01.T01 | MTR_7g017120 | 42.675 | 157 | 76 | 5 | 207 | 363 | 72 | 214 | 6.19e-22 | 94.7 |
MsG0580029989.01.T01 | MTR_2g021150 | 27.356 | 329 | 198 | 12 | 25 | 349 | 13 | 304 | 8.72e-21 | 93.2 |
MsG0580029989.01.T01 | MTR_8g101580 | 25.740 | 338 | 196 | 11 | 20 | 349 | 40 | 330 | 2.25e-19 | 89.4 |
MsG0580029989.01.T01 | MTR_2g028140 | 24.479 | 384 | 233 | 14 | 29 | 384 | 8 | 362 | 1.27e-18 | 87.4 |
MsG0580029989.01.T01 | MTR_3g083010 | 24.745 | 392 | 228 | 15 | 29 | 384 | 9 | 369 | 3.09e-18 | 86.3 |
MsG0580029989.01.T01 | MTR_2g022020 | 49.383 | 81 | 41 | 0 | 304 | 384 | 12 | 92 | 3.17e-18 | 80.1 |
MsG0580029989.01.T01 | MTR_2g028160 | 24.548 | 387 | 232 | 13 | 29 | 384 | 8 | 365 | 3.51e-18 | 85.9 |
MsG0580029989.01.T01 | MTR_3g007410 | 27.647 | 340 | 161 | 13 | 34 | 349 | 60 | 338 | 6.46e-18 | 85.1 |
MsG0580029989.01.T01 | MTR_3g007360 | 27.647 | 340 | 161 | 13 | 34 | 349 | 60 | 338 | 1.27e-17 | 84.3 |
MsG0580029989.01.T01 | MTR_3g047580 | 34.932 | 146 | 62 | 4 | 23 | 164 | 11 | 127 | 1.32e-17 | 79.0 |
MsG0580029989.01.T01 | MTR_2g028130 | 24.439 | 401 | 213 | 18 | 29 | 384 | 8 | 363 | 2.80e-17 | 83.2 |
MsG0580029989.01.T01 | MTR_1g050305 | 59.459 | 74 | 25 | 2 | 315 | 383 | 21 | 94 | 4.31e-17 | 77.8 |
MsG0580029989.01.T01 | MTR_3g013740 | 25.272 | 368 | 208 | 14 | 6 | 349 | 18 | 342 | 4.47e-17 | 82.8 |
MsG0580029989.01.T01 | MTR_1g068835 | 24.798 | 371 | 219 | 15 | 29 | 384 | 7 | 332 | 1.77e-16 | 80.5 |
MsG0580029989.01.T01 | MTR_4g023080 | 25.620 | 363 | 212 | 15 | 25 | 380 | 8 | 319 | 2.43e-16 | 80.1 |
MsG0580029989.01.T01 | MTR_7g070440 | 24.528 | 371 | 217 | 13 | 21 | 369 | 2 | 331 | 2.58e-16 | 80.1 |
MsG0580029989.01.T01 | MTR_0044s0300 | 27.523 | 327 | 183 | 12 | 29 | 349 | 41 | 319 | 3.81e-16 | 79.7 |
MsG0580029989.01.T01 | MTR_3g014570 | 26.300 | 327 | 194 | 14 | 29 | 350 | 32 | 316 | 4.56e-16 | 79.3 |
MsG0580029989.01.T01 | MTR_7g013590 | 26.606 | 327 | 193 | 13 | 29 | 349 | 39 | 324 | 1.10e-15 | 78.6 |
MsG0580029989.01.T01 | MTR_3g009310 | 26.050 | 357 | 202 | 15 | 4 | 349 | 21 | 326 | 1.56e-15 | 77.8 |
MsG0580029989.01.T01 | MTR_4g021785 | 24.728 | 368 | 210 | 14 | 25 | 380 | 8 | 320 | 1.89e-15 | 77.4 |
MsG0580029989.01.T01 | MTR_3g036335 | 25.344 | 363 | 199 | 16 | 29 | 376 | 44 | 349 | 2.14e-15 | 77.4 |
MsG0580029989.01.T01 | MTR_3g024110 | 26.284 | 331 | 177 | 14 | 29 | 349 | 104 | 377 | 2.18e-15 | 77.8 |
MsG0580029989.01.T01 | MTR_3g097190 | 60.784 | 51 | 20 | 0 | 334 | 384 | 28 | 78 | 2.25e-15 | 73.9 |
MsG0580029989.01.T01 | MTR_2g029990 | 26.300 | 327 | 193 | 14 | 29 | 349 | 54 | 338 | 3.25e-15 | 77.0 |
MsG0580029989.01.T01 | MTR_4g023120 | 23.780 | 328 | 205 | 11 | 26 | 349 | 3 | 289 | 3.34e-15 | 76.6 |
MsG0580029989.01.T01 | MTR_3g014540 | 25.532 | 329 | 192 | 12 | 29 | 349 | 32 | 315 | 4.01e-15 | 76.6 |
MsG0580029989.01.T01 | MTR_0667s0010 | 23.691 | 401 | 220 | 17 | 22 | 384 | 2 | 354 | 5.14e-15 | 76.3 |
MsG0580029989.01.T01 | MTR_4g094365 | 24.857 | 350 | 216 | 11 | 25 | 368 | 7 | 315 | 5.49e-15 | 75.9 |
MsG0580029989.01.T01 | MTR_4g070550 | 24.747 | 396 | 210 | 18 | 29 | 383 | 8 | 356 | 6.00e-15 | 76.3 |
MsG0580029989.01.T01 | MTR_2g024110 | 23.622 | 381 | 225 | 15 | 26 | 384 | 4 | 340 | 6.03e-15 | 75.9 |
MsG0580029989.01.T01 | MTR_3g034130 | 23.901 | 364 | 237 | 14 | 25 | 380 | 8 | 339 | 6.14e-15 | 75.9 |
MsG0580029989.01.T01 | MTR_6g087660 | 41.509 | 106 | 57 | 2 | 23 | 126 | 15 | 117 | 6.56e-15 | 73.2 |
MsG0580029989.01.T01 | MTR_5g057790 | 24.847 | 326 | 196 | 12 | 29 | 349 | 49 | 330 | 6.97e-15 | 75.9 |
MsG0580029989.01.T01 | MTR_4g094400 | 35.000 | 140 | 68 | 3 | 240 | 372 | 2 | 125 | 7.33e-15 | 71.2 |
MsG0580029989.01.T01 | MTR_1g068860 | 24.267 | 375 | 218 | 16 | 29 | 384 | 7 | 334 | 7.99e-15 | 75.5 |
MsG0580029989.01.T01 | MTR_4g023090 | 24.859 | 354 | 216 | 14 | 25 | 370 | 15 | 326 | 8.48e-15 | 75.5 |
MsG0580029989.01.T01 | MTR_6g065980 | 24.074 | 324 | 183 | 11 | 29 | 347 | 19 | 284 | 9.55e-15 | 75.1 |
MsG0580029989.01.T01 | MTR_3g013770 | 25.610 | 328 | 197 | 12 | 29 | 349 | 36 | 323 | 1.31e-14 | 75.1 |
MsG0580029989.01.T01 | MTR_1g050542 | 25.203 | 369 | 214 | 14 | 26 | 382 | 58 | 376 | 1.70e-14 | 74.7 |
MsG0580029989.01.T01 | MTR_3g083640 | 24.528 | 318 | 196 | 7 | 29 | 346 | 58 | 331 | 1.83e-14 | 74.7 |
MsG0580029989.01.T01 | MTR_8g467140 | 25.982 | 331 | 195 | 12 | 25 | 349 | 31 | 317 | 2.71e-14 | 73.6 |
MsG0580029989.01.T01 | MTR_5g057710 | 25.153 | 326 | 195 | 12 | 29 | 349 | 49 | 330 | 6.59e-14 | 73.2 |
MsG0580029989.01.T01 | MTR_2g426070 | 24.156 | 385 | 212 | 16 | 34 | 383 | 14 | 353 | 1.09e-13 | 72.4 |
MsG0580029989.01.T01 | MTR_2g426060 | 25.455 | 385 | 218 | 18 | 29 | 384 | 9 | 353 | 1.71e-13 | 71.6 |
MsG0580029989.01.T01 | MTR_2g021050 | 24.538 | 379 | 204 | 18 | 29 | 384 | 8 | 327 | 3.14e-13 | 70.9 |
MsG0580029989.01.T01 | MTR_4g023070 | 22.699 | 326 | 211 | 9 | 26 | 349 | 3 | 289 | 3.30e-13 | 70.9 |
MsG0580029989.01.T01 | MTR_2g078900 | 25.970 | 335 | 177 | 17 | 29 | 349 | 36 | 313 | 3.73e-13 | 70.5 |
MsG0580029989.01.T01 | MTR_3g034180 | 24.119 | 369 | 238 | 13 | 9 | 368 | 106 | 441 | 4.54e-13 | 70.9 |
MsG0580029989.01.T01 | MTR_7g070830 | 23.577 | 369 | 197 | 17 | 26 | 349 | 21 | 349 | 4.59e-13 | 70.5 |
MsG0580029989.01.T01 | MTR_4g023150 | 23.977 | 342 | 212 | 9 | 39 | 376 | 23 | 320 | 5.84e-13 | 69.7 |
MsG0580029989.01.T01 | MTR_3g011060 | 26.426 | 333 | 194 | 14 | 29 | 349 | 31 | 324 | 1.09e-12 | 69.3 |
MsG0580029989.01.T01 | MTR_1g094210 | 24.576 | 354 | 201 | 14 | 5 | 349 | 36 | 332 | 1.43e-12 | 68.9 |
MsG0580029989.01.T01 | MTR_3g006670 | 26.554 | 354 | 216 | 13 | 29 | 379 | 52 | 364 | 1.45e-12 | 68.9 |
MsG0580029989.01.T01 | MTR_2g031720 | 24.468 | 376 | 220 | 18 | 29 | 384 | 9 | 340 | 1.50e-12 | 68.9 |
MsG0580029989.01.T01 | MTR_3g010590 | 25.220 | 341 | 163 | 14 | 29 | 349 | 42 | 310 | 1.93e-12 | 68.6 |
MsG0580029989.01.T01 | MTR_1g094210 | 24.576 | 354 | 201 | 14 | 5 | 349 | 36 | 332 | 1.93e-12 | 68.6 |
MsG0580029989.01.T01 | MTR_5g027370 | 23.467 | 375 | 204 | 16 | 6 | 347 | 7 | 331 | 2.46e-12 | 68.6 |
MsG0580029989.01.T01 | MTR_3g009240 | 25.680 | 331 | 185 | 13 | 29 | 350 | 39 | 317 | 2.61e-12 | 68.2 |
MsG0580029989.01.T01 | MTR_4g023200 | 24.781 | 343 | 206 | 10 | 40 | 376 | 24 | 320 | 2.64e-12 | 67.8 |
MsG0580029989.01.T01 | MTR_5g027330 | 23.467 | 375 | 204 | 16 | 6 | 347 | 18 | 342 | 2.72e-12 | 68.2 |
MsG0580029989.01.T01 | MTR_2g024100 | 24.937 | 397 | 213 | 16 | 27 | 384 | 8 | 358 | 3.37e-12 | 67.8 |
MsG0580029989.01.T01 | MTR_3g006570 | 23.304 | 339 | 185 | 14 | 29 | 349 | 24 | 305 | 5.40e-12 | 67.0 |
MsG0580029989.01.T01 | MTR_5g097730 | 60.465 | 43 | 17 | 0 | 336 | 378 | 15 | 57 | 6.40e-12 | 60.8 |
MsG0580029989.01.T01 | MTR_5g057020 | 23.292 | 322 | 191 | 11 | 29 | 349 | 49 | 315 | 8.67e-12 | 66.2 |
MsG0580029989.01.T01 | MTR_7g070880 | 23.577 | 369 | 197 | 17 | 26 | 349 | 21 | 349 | 8.85e-12 | 66.6 |
MsG0580029989.01.T01 | MTR_2g426020 | 24.623 | 398 | 219 | 19 | 22 | 384 | 2 | 353 | 1.40e-11 | 65.9 |
MsG0580029989.01.T01 | MTR_2g031640 | 24.147 | 381 | 211 | 18 | 29 | 384 | 9 | 336 | 1.91e-11 | 65.5 |
MsG0580029989.01.T01 | MTR_1g097490 | 23.885 | 381 | 239 | 15 | 7 | 382 | 30 | 364 | 1.99e-11 | 65.5 |
MsG0580029989.01.T01 | MTR_5g046300 | 25.758 | 330 | 185 | 14 | 29 | 350 | 7 | 284 | 1.99e-11 | 65.1 |
MsG0580029989.01.T01 | MTR_5g046290 | 25.758 | 330 | 185 | 14 | 29 | 350 | 7 | 284 | 1.99e-11 | 65.1 |
MsG0580029989.01.T01 | MTR_3g007270 | 23.423 | 333 | 212 | 11 | 29 | 353 | 50 | 347 | 2.15e-11 | 65.5 |
MsG0580029989.01.T01 | MTR_2g426090 | 25.000 | 380 | 222 | 16 | 29 | 383 | 9 | 350 | 2.65e-11 | 65.1 |
MsG0580029989.01.T01 | MTR_3g030250 | 25.153 | 326 | 184 | 12 | 29 | 349 | 40 | 310 | 2.98e-11 | 64.7 |
MsG0580029989.01.T01 | MTR_1g055070 | 23.673 | 245 | 157 | 7 | 29 | 259 | 52 | 280 | 3.48e-11 | 64.7 |
MsG0580029989.01.T01 | MTR_0115s0020 | 24.561 | 342 | 221 | 14 | 26 | 353 | 10 | 328 | 3.88e-11 | 64.7 |
MsG0580029989.01.T01 | MTR_7g007300 | 26.380 | 326 | 178 | 13 | 29 | 347 | 106 | 376 | 4.78e-11 | 64.3 |
MsG0580029989.01.T01 | MTR_2g025420 | 25.243 | 412 | 215 | 20 | 22 | 384 | 2 | 369 | 5.37e-11 | 64.3 |
MsG0580029989.01.T01 | MTR_4g109280 | 25.069 | 363 | 214 | 15 | 24 | 374 | 6 | 322 | 6.99e-11 | 63.5 |
MsG0580029989.01.T01 | MTR_3g010620 | 22.849 | 337 | 174 | 10 | 29 | 349 | 39 | 305 | 8.79e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029989.01.T01 | AT3G16210 | 26.335 | 281 | 144 | 10 | 22 | 296 | 1 | 224 | 9.41e-16 | 78.2 |
MsG0580029989.01.T01 | AT3G17490 | 26.649 | 379 | 204 | 14 | 25 | 384 | 5 | 328 | 2.45e-15 | 77.4 |
MsG0580029989.01.T01 | AT3G06240 | 23.274 | 391 | 226 | 14 | 29 | 383 | 39 | 391 | 6.01e-15 | 76.3 |
MsG0580029989.01.T01 | AT4G12560 | 23.784 | 370 | 236 | 13 | 29 | 384 | 7 | 344 | 5.72e-14 | 73.2 |
MsG0580029989.01.T01 | AT4G12560 | 23.784 | 370 | 236 | 13 | 29 | 384 | 7 | 344 | 5.72e-14 | 73.2 |
MsG0580029989.01.T01 | AT4G12560 | 23.784 | 370 | 236 | 13 | 29 | 384 | 7 | 344 | 5.72e-14 | 73.2 |
MsG0580029989.01.T01 | AT3G22730 | 25.890 | 309 | 173 | 11 | 26 | 328 | 6 | 264 | 3.67e-13 | 70.5 |
MsG0580029989.01.T01 | AT3G21120 | 25.442 | 283 | 166 | 9 | 25 | 299 | 2 | 247 | 1.26e-12 | 68.9 |
MsG0580029989.01.T01 | AT3G49980 | 24.540 | 326 | 195 | 11 | 33 | 349 | 12 | 295 | 1.04e-11 | 66.2 |
MsG0580029989.01.T01 | AT3G49980 | 25.000 | 264 | 149 | 9 | 33 | 288 | 13 | 235 | 1.14e-11 | 66.2 |
Find 84 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTGCCGCATGTTTCTTTC+TGG | 0.003055 | 5:-104770907 | MsG0580029989.01.T01:CDS |
TACATTTCACATTTCAATTT+TGG | 0.068041 | 5:-104770552 | MsG0580029989.01.T01:CDS |
CAAAGATTTGAGAGGAAGTT+TGG | 0.217485 | 5:+104771426 | None:intergenic |
CTAGGGATATTGATCCTAAT+TGG | 0.236550 | 5:-104771033 | MsG0580029989.01.T01:CDS |
TTGATCCTAATTGGTATGTT+TGG | 0.242256 | 5:-104771024 | MsG0580029989.01.T01:CDS |
AGGAATGATCTTGAATTTAT+TGG | 0.245404 | 5:+104771060 | None:intergenic |
AGACATTTGATGGTATTAAA+TGG | 0.264646 | 5:-104770611 | MsG0580029989.01.T01:CDS |
TCAAGATCATTCCTCCTTCT+AGG | 0.270512 | 5:-104771051 | MsG0580029989.01.T01:CDS |
CCATATCAATATTATGAATC+AGG | 0.284470 | 5:-104771169 | MsG0580029989.01.T01:CDS |
CTATTTCCAGTAAGAGGTTT+GGG | 0.307150 | 5:-104771228 | MsG0580029989.01.T01:CDS |
TCGATTCCCAAACCTCTTAC+TGG | 0.323203 | 5:+104771222 | None:intergenic |
TGATCCTAATTGGTATGTTT+GGG | 0.340602 | 5:-104771023 | MsG0580029989.01.T01:CDS |
GGCACTCTTTGTCTTGACTA+TGG | 0.345082 | 5:-104771115 | MsG0580029989.01.T01:CDS |
CCTGATTCATAATATTGATA+TGG | 0.345627 | 5:+104771169 | None:intergenic |
TTGTCTTGACTATGGCGATA+TGG | 0.352376 | 5:-104771107 | MsG0580029989.01.T01:CDS |
TGAAATAAGGGTTATCAAAA+AGG | 0.352804 | 5:+104771368 | None:intergenic |
CGGTGCATAGTCATGAAATA+AGG | 0.355053 | 5:+104771355 | None:intergenic |
ATCTTGAATTTATTGGTAGT+TGG | 0.361318 | 5:+104771067 | None:intergenic |
TTAGCCCAAACATACCAATT+AGG | 0.370141 | 5:+104771019 | None:intergenic |
TTGAATGCGCATGCAAATCT+TGG | 0.378009 | 5:-104771396 | MsG0580029989.01.T01:CDS |
TGCGCAATCATTTACGTAAG+AGG | 0.379908 | 5:+104770652 | None:intergenic |
GGACTAAGCTCTTCATTGTT+GGG | 0.383618 | 5:-104770505 | MsG0580029989.01.T01:CDS |
TGATTGCGCAAAGGATGATT+TGG | 0.385031 | 5:-104770639 | MsG0580029989.01.T01:CDS |
ACTGCCGCATGTTTCTTTCT+GGG | 0.390540 | 5:-104770906 | MsG0580029989.01.T01:CDS |
TCTTGAATTTATTGGTAGTT+GGG | 0.392140 | 5:+104771068 | None:intergenic |
GACTGCATCATCAAATGTTC+AGG | 0.394355 | 5:-104771515 | MsG0580029989.01.T01:CDS |
GAGTGTCTCATTGGTGGTGG+TGG | 0.395197 | 5:-104770784 | MsG0580029989.01.T01:CDS |
TTTGGTCAAGAGACATTTGA+TGG | 0.397847 | 5:-104770621 | MsG0580029989.01.T01:CDS |
ATCATTTACGTAAGAGGGTA+TGG | 0.401406 | 5:+104770658 | None:intergenic |
TACATAATTGCTAACCTCAT+TGG | 0.402555 | 5:+104771477 | None:intergenic |
TCTATTTCCAGTAAGAGGTT+TGG | 0.407876 | 5:-104771229 | MsG0580029989.01.T01:CDS |
TGTACTCTATTTCCAGTAAG+AGG | 0.408569 | 5:-104771234 | MsG0580029989.01.T01:CDS |
AGAAAGGCAATATATTGATT+AGG | 0.408810 | 5:-104770445 | MsG0580029989.01.T01:CDS |
TGGACTAAGCTCTTCATTGT+TGG | 0.415583 | 5:-104770506 | MsG0580029989.01.T01:CDS |
GGAATCGAGTTAAATTAGAT+TGG | 0.419484 | 5:-104771207 | MsG0580029989.01.T01:CDS |
AGAGTGCCATTAAAACTAAC+GGG | 0.435565 | 5:+104771130 | None:intergenic |
CCTTTCTTTCCTGCTCCAAT+CGG | 0.443210 | 5:+104770461 | None:intergenic |
ATAGCCTAAGCAGTAACTCT+TGG | 0.461019 | 5:-104770877 | MsG0580029989.01.T01:CDS |
TTGGTGGTGGTGGGATATAA+AGG | 0.462153 | 5:-104770774 | MsG0580029989.01.T01:CDS |
CAAGATCATTCCTCCTTCTA+GGG | 0.478095 | 5:-104771050 | MsG0580029989.01.T01:CDS |
TTAGGATCAATATCCCTAGA+AGG | 0.482417 | 5:+104771037 | None:intergenic |
TTTGGGTGAACTCGGTGTAA+AGG | 0.483103 | 5:-104770534 | MsG0580029989.01.T01:CDS |
CTCGAGTATCCGATTGGAGC+AGG | 0.486911 | 5:-104770470 | MsG0580029989.01.T01:CDS |
GCGCAATCATTTACGTAAGA+GGG | 0.487996 | 5:+104770653 | None:intergenic |
CCGATTGGAGCAGGAAAGAA+AGG | 0.488664 | 5:-104770461 | MsG0580029989.01.T01:CDS |
TGATATGGTAATGACGGATC+TGG | 0.499273 | 5:+104771184 | None:intergenic |
AAGATGACTATAAAATGCTT+CGG | 0.505062 | 5:-104770967 | MsG0580029989.01.T01:CDS |
AACTCGGTGTAAAGGAATCA+TGG | 0.507915 | 5:-104770526 | MsG0580029989.01.T01:CDS |
TGGGCTAATAATCATCAAGT+TGG | 0.509591 | 5:-104771004 | MsG0580029989.01.T01:CDS |
TGCCTTTGTTTGTTAAAAGT+AGG | 0.515594 | 5:+104771281 | None:intergenic |
CAGAAAGAAACATGCGGCAG+TGG | 0.519042 | 5:+104770908 | None:intergenic |
ACACAATCTCATCAATCATT+CGG | 0.522164 | 5:+104770385 | None:intergenic |
CATTGCCTCGAGTATCCGAT+TGG | 0.522334 | 5:-104770476 | MsG0580029989.01.T01:CDS |
ACATGGATGGAGTGTCTCAT+TGG | 0.526077 | 5:-104770793 | MsG0580029989.01.T01:CDS |
CTTTGTTTGTTAAAAGTAGG+AGG | 0.531556 | 5:+104771284 | None:intergenic |
GGTGCATAGTCATGAAATAA+GGG | 0.532570 | 5:+104771356 | None:intergenic |
TTCTCCAAGAGTTACTGCTT+AGG | 0.539638 | 5:+104770873 | None:intergenic |
AGTGTCTCATTGGTGGTGGT+GGG | 0.546234 | 5:-104770783 | MsG0580029989.01.T01:CDS |
ATGGAGTGTCTCATTGGTGG+TGG | 0.548095 | 5:-104770787 | MsG0580029989.01.T01:CDS |
TAATATTGATATGGTAATGA+CGG | 0.558367 | 5:+104771178 | None:intergenic |
AGGAGACAAATACATGGTGG+TGG | 0.558886 | 5:-104770754 | MsG0580029989.01.T01:CDS |
AATCGTTTCAAAGATTTGAG+AGG | 0.568094 | 5:+104771418 | None:intergenic |
AATGTGAAATGTAGATGTCT+TGG | 0.571579 | 5:+104770562 | None:intergenic |
TGGATGGAGTGTCTCATTGG+TGG | 0.578760 | 5:-104770790 | MsG0580029989.01.T01:CDS |
AATAGAGAAAGTAATATCAT+CGG | 0.585563 | 5:+104771453 | None:intergenic |
AAGAGTGCCATTAAAACTAA+CGG | 0.589253 | 5:+104771129 | None:intergenic |
GCATCATCAAATGTTCAGGT+TGG | 0.589338 | 5:-104771511 | MsG0580029989.01.T01:CDS |
GGATACTCGAGGCAATGTAA+AGG | 0.597086 | 5:+104770482 | None:intergenic |
TGCTGATGAATACGTGTACA+TGG | 0.597531 | 5:-104770810 | MsG0580029989.01.T01:CDS |
TCATTTACGTAAGAGGGTAT+GGG | 0.602912 | 5:+104770659 | None:intergenic |
GATGAATACGTGTACATGGA+TGG | 0.607946 | 5:-104770806 | MsG0580029989.01.T01:CDS |
TGGCAATTATATATCCAATG+AGG | 0.614009 | 5:-104771491 | MsG0580029989.01.T01:CDS |
ATTGATGTTGATGGTAAGCA+TGG | 0.618791 | 5:-104770848 | MsG0580029989.01.T01:CDS |
ATGACTATAAAATGCTTCGG+TGG | 0.620457 | 5:-104770964 | MsG0580029989.01.T01:CDS |
GCGATATGGAAGTTGTATTG+TGG | 0.639688 | 5:-104771093 | MsG0580029989.01.T01:CDS |
ACAAACAAAGGCAACTACGA+CGG | 0.658405 | 5:-104771271 | MsG0580029989.01.T01:CDS |
TTACGTAAATGATTGCGCAA+AGG | 0.659788 | 5:-104770648 | MsG0580029989.01.T01:CDS |
CTGCTCCAATCGGATACTCG+AGG | 0.666568 | 5:+104770471 | None:intergenic |
GGATCAATATCCCTAGAAGG+AGG | 0.667120 | 5:+104771040 | None:intergenic |
ATATAAAGGAGACAAATACA+TGG | 0.699243 | 5:-104770760 | MsG0580029989.01.T01:CDS |
ATCTCCCAGAAAGAAACATG+CGG | 0.700131 | 5:+104770902 | None:intergenic |
TAAAGGAGACAAATACATGG+TGG | 0.730178 | 5:-104770757 | MsG0580029989.01.T01:CDS |
TCGTTCTCCGAAAATTGACG+AGG | 0.737435 | 5:-104770936 | MsG0580029989.01.T01:CDS |
GAGTGCCATTAAAACTAACG+GGG | 0.745199 | 5:+104771131 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAGAGAAAGTAATATCAT+CGG | + | Chr5:104770482-104770501 | None:intergenic | 20.0% |
!!! | ACATTTCACATTTCAATTTT+GGG | - | Chr5:104771381-104771400 | MsG0580029989.01.T01:CDS | 20.0% |
!!! | TAATATTGATATGGTAATGA+CGG | + | Chr5:104770757-104770776 | None:intergenic | 20.0% |
!!! | TACATTTCACATTTCAATTT+TGG | - | Chr5:104771380-104771399 | MsG0580029989.01.T01:CDS | 20.0% |
!!! | TTTTATAGTCATCTTTAACA+TGG | + | Chr5:104770960-104770979 | None:intergenic | 20.0% |
! | AAAAAGATAATGAACTAGCT+TGG | - | Chr5:104771511-104771530 | MsG0580029989.01.T01:CDS | 25.0% |
! | AAGATGACTATAAAATGCTT+CGG | - | Chr5:104770965-104770984 | MsG0580029989.01.T01:CDS | 25.0% |
! | AGGAATGATCTTGAATTTAT+TGG | + | Chr5:104770875-104770894 | None:intergenic | 25.0% |
! | ATATAAAGGAGACAAATACA+TGG | - | Chr5:104771172-104771191 | MsG0580029989.01.T01:CDS | 25.0% |
! | CCATATCAATATTATGAATC+AGG | - | Chr5:104770763-104770782 | MsG0580029989.01.T01:CDS | 25.0% |
! | CCTGATTCATAATATTGATA+TGG | + | Chr5:104770766-104770785 | None:intergenic | 25.0% |
! | TGAAATAAGGGTTATCAAAA+AGG | + | Chr5:104770567-104770586 | None:intergenic | 25.0% |
!! | AGAAAGGCAATATATTGATT+AGG | - | Chr5:104771487-104771506 | MsG0580029989.01.T01:CDS | 25.0% |
!! | AGACATTTGATGGTATTAAA+TGG | - | Chr5:104771321-104771340 | MsG0580029989.01.T01:CDS | 25.0% |
!! | ATCTTGAATTTATTGGTAGT+TGG | + | Chr5:104770868-104770887 | None:intergenic | 25.0% |
!! | TCTTGAATTTATTGGTAGTT+GGG | + | Chr5:104770867-104770886 | None:intergenic | 25.0% |
AATAAGGGTTATCAAAAAGG+AGG | + | Chr5:104770564-104770583 | None:intergenic | 30.0% | |
AATCGTTTCAAAGATTTGAG+AGG | + | Chr5:104770517-104770536 | None:intergenic | 30.0% | |
AATGTGAAATGTAGATGTCT+TGG | + | Chr5:104771373-104771392 | None:intergenic | 30.0% | |
ATAAGGGTTATCAAAAAGGA+GGG | + | Chr5:104770563-104770582 | None:intergenic | 30.0% | |
GGAATCGAGTTAAATTAGAT+TGG | - | Chr5:104770725-104770744 | MsG0580029989.01.T01:CDS | 30.0% | |
TACATAATTGCTAACCTCAT+TGG | + | Chr5:104770458-104770477 | None:intergenic | 30.0% | |
TGATCCTAATTGGTATGTTT+GGG | - | Chr5:104770909-104770928 | MsG0580029989.01.T01:CDS | 30.0% | |
TGGAGAAAAATTGATGTTGA+TGG | - | Chr5:104771075-104771094 | MsG0580029989.01.T01:CDS | 30.0% | |
TGGCAATTATATATCCAATG+AGG | - | Chr5:104770441-104770460 | MsG0580029989.01.T01:CDS | 30.0% | |
TTGATCCTAATTGGTATGTT+TGG | - | Chr5:104770908-104770927 | MsG0580029989.01.T01:CDS | 30.0% | |
! | CTTTGTTTGTTAAAAGTAGG+AGG | + | Chr5:104770651-104770670 | None:intergenic | 30.0% |
! | TGCCTTTGTTTGTTAAAAGT+AGG | + | Chr5:104770654-104770673 | None:intergenic | 30.0% |
!! | AAGAGTGCCATTAAAACTAA+CGG | + | Chr5:104770806-104770825 | None:intergenic | 30.0% |
!! | ATTTCAATTTTGGGTGAACT+CGG | - | Chr5:104771390-104771409 | MsG0580029989.01.T01:CDS | 30.0% |
!! | CTCCTACTTTTAACAAACAA+AGG | - | Chr5:104770649-104770668 | MsG0580029989.01.T01:CDS | 30.0% |
ATCATTTACGTAAGAGGGTA+TGG | + | Chr5:104771277-104771296 | None:intergenic | 35.0% | |
ATGACTATAAAATGCTTCGG+TGG | - | Chr5:104770968-104770987 | MsG0580029989.01.T01:CDS | 35.0% | |
CAAAGATTTGAGAGGAAGTT+TGG | + | Chr5:104770509-104770528 | None:intergenic | 35.0% | |
CCTTCGTCAAAAAATAGTTG+CGG | + | Chr5:104770600-104770619 | None:intergenic | 35.0% | |
CTAGGGATATTGATCCTAAT+TGG | - | Chr5:104770899-104770918 | MsG0580029989.01.T01:CDS | 35.0% | |
CTATTTCCAGTAAGAGGTTT+GGG | - | Chr5:104770704-104770723 | MsG0580029989.01.T01:CDS | 35.0% | |
GGTGCATAGTCATGAAATAA+GGG | + | Chr5:104770579-104770598 | None:intergenic | 35.0% | |
TAAAGGAGACAAATACATGG+TGG | - | Chr5:104771175-104771194 | MsG0580029989.01.T01:CDS | 35.0% | |
TCTATTTCCAGTAAGAGGTT+TGG | - | Chr5:104770703-104770722 | MsG0580029989.01.T01:CDS | 35.0% | |
TGGGCTAATAATCATCAAGT+TGG | - | Chr5:104770928-104770947 | MsG0580029989.01.T01:CDS | 35.0% | |
TGTACTCTATTTCCAGTAAG+AGG | - | Chr5:104770698-104770717 | MsG0580029989.01.T01:CDS | 35.0% | |
TTACGTAAATGATTGCGCAA+AGG | - | Chr5:104771284-104771303 | MsG0580029989.01.T01:CDS | 35.0% | |
TTAGCCCAAACATACCAATT+AGG | + | Chr5:104770916-104770935 | None:intergenic | 35.0% | |
TTAGGATCAATATCCCTAGA+AGG | + | Chr5:104770898-104770917 | None:intergenic | 35.0% | |
TTTGGTCAAGAGACATTTGA+TGG | - | Chr5:104771311-104771330 | MsG0580029989.01.T01:CDS | 35.0% | |
! | AGAGTGCCATTAAAACTAAC+GGG | + | Chr5:104770805-104770824 | None:intergenic | 35.0% |
! | TCATTTACGTAAGAGGGTAT+GGG | + | Chr5:104771276-104771295 | None:intergenic | 35.0% |
!! | ATTGATGTTGATGGTAAGCA+TGG | - | Chr5:104771084-104771103 | MsG0580029989.01.T01:CDS | 35.0% |
!!! | TTTCTCCCCGTTAGTTTTAA+TGG | - | Chr5:104770796-104770815 | MsG0580029989.01.T01:CDS | 35.0% |
ACAAACAAAGGCAACTACGA+CGG | - | Chr5:104770661-104770680 | MsG0580029989.01.T01:CDS | 40.0% | |
ATAGCCTAAGCAGTAACTCT+TGG | - | Chr5:104771055-104771074 | MsG0580029989.01.T01:CDS | 40.0% | |
ATCTCCCAGAAAGAAACATG+CGG | + | Chr5:104771033-104771052 | None:intergenic | 40.0% | |
CAAGATCATTCCTCCTTCTA+GGG | - | Chr5:104770882-104770901 | MsG0580029989.01.T01:CDS | 40.0% | |
CGGTGCATAGTCATGAAATA+AGG | + | Chr5:104770580-104770599 | None:intergenic | 40.0% | |
GACTGCATCATCAAATGTTC+AGG | - | Chr5:104770417-104770436 | MsG0580029989.01.T01:CDS | 40.0% | |
GATGAATACGTGTACATGGA+TGG | - | Chr5:104771126-104771145 | MsG0580029989.01.T01:CDS | 40.0% | |
GCATCATCAAATGTTCAGGT+TGG | - | Chr5:104770421-104770440 | MsG0580029989.01.T01:CDS | 40.0% | |
GCGATATGGAAGTTGTATTG+TGG | - | Chr5:104770839-104770858 | MsG0580029989.01.T01:CDS | 40.0% | |
GCGCAATCATTTACGTAAGA+GGG | + | Chr5:104771282-104771301 | None:intergenic | 40.0% | |
GGACTAAGCTCTTCATTGTT+GGG | - | Chr5:104771427-104771446 | MsG0580029989.01.T01:CDS | 40.0% | |
TCAAGATCATTCCTCCTTCT+AGG | - | Chr5:104770881-104770900 | MsG0580029989.01.T01:CDS | 40.0% | |
TGATTGCGCAAAGGATGATT+TGG | - | Chr5:104771293-104771312 | MsG0580029989.01.T01:CDS | 40.0% | |
TGCGCAATCATTTACGTAAG+AGG | + | Chr5:104771283-104771302 | None:intergenic | 40.0% | |
TGCTGATGAATACGTGTACA+TGG | - | Chr5:104771122-104771141 | MsG0580029989.01.T01:CDS | 40.0% | |
TGGACTAAGCTCTTCATTGT+TGG | - | Chr5:104771426-104771445 | MsG0580029989.01.T01:CDS | 40.0% | |
TTCTCCAAGAGTTACTGCTT+AGG | + | Chr5:104771062-104771081 | None:intergenic | 40.0% | |
TTGAATGCGCATGCAAATCT+TGG | - | Chr5:104770536-104770555 | MsG0580029989.01.T01:CDS | 40.0% | |
TTGTCTTGACTATGGCGATA+TGG | - | Chr5:104770825-104770844 | MsG0580029989.01.T01:CDS | 40.0% | |
! | GAGTGCCATTAAAACTAACG+GGG | + | Chr5:104770804-104770823 | None:intergenic | 40.0% |
!! | AACTCGGTGTAAAGGAATCA+TGG | - | Chr5:104771406-104771425 | MsG0580029989.01.T01:CDS | 40.0% |
!! | TGATATGGTAATGACGGATC+TGG | + | Chr5:104770751-104770770 | None:intergenic | 40.0% |
!!! | CCGCAACTATTTTTTGACGA+AGG | - | Chr5:104770597-104770616 | MsG0580029989.01.T01:CDS | 40.0% |
ACTGCCGCATGTTTCTTTCT+GGG | - | Chr5:104771026-104771045 | MsG0580029989.01.T01:CDS | 45.0% | |
AGGAGACAAATACATGGTGG+TGG | - | Chr5:104771178-104771197 | MsG0580029989.01.T01:CDS | 45.0% | |
CCTTTCTTTCCTGCTCCAAT+CGG | + | Chr5:104771474-104771493 | None:intergenic | 45.0% | |
GGATACTCGAGGCAATGTAA+AGG | + | Chr5:104771453-104771472 | None:intergenic | 45.0% | |
GGATCAATATCCCTAGAAGG+AGG | + | Chr5:104770895-104770914 | None:intergenic | 45.0% | |
GGCACTCTTTGTCTTGACTA+TGG | - | Chr5:104770817-104770836 | MsG0580029989.01.T01:CDS | 45.0% | |
TCGATTCCCAAACCTCTTAC+TGG | + | Chr5:104770713-104770732 | None:intergenic | 45.0% | |
TCGTTCTCCGAAAATTGACG+AGG | - | Chr5:104770996-104771015 | MsG0580029989.01.T01:CDS | 45.0% | |
! | ACATGGATGGAGTGTCTCAT+TGG | - | Chr5:104771139-104771158 | MsG0580029989.01.T01:CDS | 45.0% |
! | GGCACATCCTCGTCAATTTT+CGG | + | Chr5:104771006-104771025 | None:intergenic | 45.0% |
!! | TTGGTGGTGGTGGGATATAA+AGG | - | Chr5:104771158-104771177 | MsG0580029989.01.T01:CDS | 45.0% |
!! | TTTGGGTGAACTCGGTGTAA+AGG | - | Chr5:104771398-104771417 | MsG0580029989.01.T01:CDS | 45.0% |
CACTGCCGCATGTTTCTTTC+TGG | - | Chr5:104771025-104771044 | MsG0580029989.01.T01:CDS | 50.0% | |
CAGAAAGAAACATGCGGCAG+TGG | + | Chr5:104771027-104771046 | None:intergenic | 50.0% | |
CATTGCCTCGAGTATCCGAT+TGG | - | Chr5:104771456-104771475 | MsG0580029989.01.T01:CDS | 50.0% | |
CCGATTGGAGCAGGAAAGAA+AGG | - | Chr5:104771471-104771490 | MsG0580029989.01.T01:CDS | 50.0% | |
! | ATGGAGTGTCTCATTGGTGG+TGG | - | Chr5:104771145-104771164 | MsG0580029989.01.T01:CDS | 50.0% |
! | TGGATGGAGTGTCTCATTGG+TGG | - | Chr5:104771142-104771161 | MsG0580029989.01.T01:CDS | 50.0% |
!! | AGTGTCTCATTGGTGGTGGT+GGG | - | Chr5:104771149-104771168 | MsG0580029989.01.T01:CDS | 50.0% |
CTCGAGTATCCGATTGGAGC+AGG | - | Chr5:104771462-104771481 | MsG0580029989.01.T01:CDS | 55.0% | |
CTGCTCCAATCGGATACTCG+AGG | + | Chr5:104771464-104771483 | None:intergenic | 55.0% | |
!! | GAGTGTCTCATTGGTGGTGG+TGG | - | Chr5:104771148-104771167 | MsG0580029989.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 104770400 | 104771554 | 104770400 | ID=MsG0580029989.01;Name=MsG0580029989.01 |
Chr5 | mRNA | 104770400 | 104771554 | 104770400 | ID=MsG0580029989.01.T01;Parent=MsG0580029989.01;Name=MsG0580029989.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|384 |
Chr5 | exon | 104770400 | 104771554 | 104770400 | ID=MsG0580029989.01.T01:exon:8982;Parent=MsG0580029989.01.T01 |
Chr5 | CDS | 104770400 | 104771554 | 104770400 | ID=MsG0580029989.01.T01:cds;Parent=MsG0580029989.01.T01 |
Gene Sequence |
Protein sequence |