Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035290.01.T01 | KEH16624.1 | 71.084 | 415 | 85 | 9 | 7 | 395 | 4 | 409 | 0 | 533 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035290.01.T01 | Q8GXC7 | 24.747 | 396 | 227 | 15 | 20 | 375 | 39 | 403 | 2.63E-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035290.01.T01 | A0A072TGC3 | 71.084 | 415 | 85 | 9 | 7 | 395 | 4 | 409 | 0.0 | 533 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035290.01.T01 | MTR_0129s0050 | 71.084 | 415 | 85 | 9 | 7 | 395 | 4 | 409 | 0.0 | 533 |
MsG0680035290.01.T01 | MTR_0129s0070 | 57.908 | 411 | 141 | 6 | 1 | 394 | 1 | 396 | 6.01e-153 | 438 |
MsG0680035290.01.T01 | MTR_0129s0120 | 56.341 | 410 | 147 | 6 | 1 | 393 | 1 | 395 | 3.63e-144 | 415 |
MsG0680035290.01.T01 | MTR_4g117550 | 54.167 | 408 | 138 | 10 | 1 | 394 | 1 | 373 | 5.61e-135 | 391 |
MsG0680035290.01.T01 | MTR_8g063440 | 47.537 | 406 | 167 | 10 | 9 | 394 | 4 | 383 | 1.01e-109 | 327 |
MsG0680035290.01.T01 | MTR_2g021800 | 45.412 | 425 | 191 | 12 | 2 | 394 | 1 | 416 | 5.81e-104 | 313 |
MsG0680035290.01.T01 | MTR_2g038680 | 44.444 | 423 | 191 | 12 | 2 | 393 | 1 | 410 | 3.55e-103 | 311 |
MsG0680035290.01.T01 | MTR_5g097330 | 44.601 | 426 | 180 | 12 | 2 | 394 | 1 | 403 | 1.31e-102 | 310 |
MsG0680035290.01.T01 | MTR_6g079810 | 44.444 | 423 | 190 | 10 | 1 | 392 | 53 | 461 | 7.56e-102 | 310 |
MsG0680035290.01.T01 | MTR_2g022000 | 44.712 | 416 | 190 | 12 | 2 | 386 | 1 | 407 | 2.90e-100 | 305 |
MsG0680035290.01.T01 | MTR_1g007450 | 47.089 | 395 | 174 | 9 | 7 | 380 | 2 | 382 | 9.93e-99 | 300 |
MsG0680035290.01.T01 | MTR_6g086825 | 43.826 | 413 | 181 | 10 | 14 | 394 | 67 | 460 | 8.71e-98 | 299 |
MsG0680035290.01.T01 | MTR_8g464770 | 46.134 | 388 | 184 | 11 | 7 | 386 | 2 | 372 | 1.99e-97 | 295 |
MsG0680035290.01.T01 | MTR_0134s0060 | 44.181 | 421 | 186 | 11 | 9 | 393 | 4 | 411 | 2.63e-95 | 291 |
MsG0680035290.01.T01 | MTR_4g014370 | 42.069 | 435 | 175 | 11 | 10 | 395 | 4 | 410 | 3.02e-95 | 291 |
MsG0680035290.01.T01 | MTR_4g102410 | 43.447 | 412 | 193 | 13 | 7 | 392 | 51 | 448 | 5.00e-95 | 291 |
MsG0680035290.01.T01 | MTR_6g079770 | 45.673 | 416 | 179 | 11 | 12 | 392 | 12 | 415 | 6.18e-95 | 290 |
MsG0680035290.01.T01 | MTR_8g012090 | 46.612 | 369 | 141 | 8 | 9 | 363 | 8 | 334 | 2.73e-94 | 286 |
MsG0680035290.01.T01 | MTR_2g104340 | 44.118 | 408 | 193 | 13 | 7 | 394 | 4 | 396 | 6.58e-93 | 285 |
MsG0680035290.01.T01 | MTR_6g090180 | 42.718 | 412 | 206 | 9 | 1 | 390 | 31 | 434 | 8.51e-92 | 283 |
MsG0680035290.01.T01 | MTR_5g097680 | 41.333 | 450 | 185 | 15 | 1 | 394 | 1 | 427 | 4.08e-91 | 281 |
MsG0680035290.01.T01 | MTR_0054s0090 | 41.784 | 426 | 198 | 9 | 1 | 395 | 1 | 407 | 7.17e-91 | 280 |
MsG0680035290.01.T01 | MTR_7g069550 | 42.308 | 416 | 188 | 17 | 7 | 394 | 4 | 395 | 1.75e-90 | 278 |
MsG0680035290.01.T01 | MTR_2g021770 | 42.169 | 415 | 207 | 11 | 5 | 394 | 1 | 407 | 5.81e-90 | 277 |
MsG0680035290.01.T01 | MTR_5g097220 | 42.890 | 429 | 185 | 12 | 5 | 394 | 1 | 408 | 1.72e-89 | 276 |
MsG0680035290.01.T01 | MTR_2g021950 | 42.716 | 405 | 204 | 14 | 2 | 390 | 1 | 393 | 4.95e-89 | 275 |
MsG0680035290.01.T01 | MTR_8g041270 | 43.405 | 417 | 198 | 13 | 4 | 394 | 2 | 406 | 9.03e-89 | 274 |
MsG0680035290.01.T01 | MTR_5g059430 | 40.633 | 411 | 219 | 8 | 6 | 392 | 15 | 424 | 1.59e-88 | 274 |
MsG0680035290.01.T01 | MTR_6g461660 | 42.651 | 415 | 186 | 13 | 8 | 394 | 10 | 400 | 1.77e-88 | 273 |
MsG0680035290.01.T01 | MTR_2g066170 | 43.066 | 411 | 179 | 14 | 9 | 393 | 4 | 385 | 2.68e-88 | 272 |
MsG0680035290.01.T01 | MTR_7g017130 | 44.691 | 405 | 184 | 13 | 11 | 394 | 12 | 397 | 8.27e-88 | 271 |
MsG0680035290.01.T01 | MTR_5g037680 | 43.655 | 394 | 185 | 15 | 12 | 386 | 3 | 378 | 2.14e-87 | 272 |
MsG0680035290.01.T01 | MTR_4g055820 | 45.961 | 359 | 174 | 8 | 6 | 348 | 3 | 357 | 2.57e-87 | 269 |
MsG0680035290.01.T01 | MTR_7g017040 | 43.614 | 415 | 175 | 12 | 12 | 394 | 11 | 398 | 4.07e-87 | 270 |
MsG0680035290.01.T01 | MTR_6g478230 | 42.373 | 413 | 193 | 11 | 7 | 395 | 17 | 408 | 4.41e-87 | 270 |
MsG0680035290.01.T01 | MTR_0054s0100 | 40.706 | 425 | 204 | 10 | 1 | 394 | 1 | 408 | 6.09e-87 | 270 |
MsG0680035290.01.T01 | MTR_5g096630 | 42.157 | 408 | 207 | 13 | 11 | 394 | 12 | 414 | 9.82e-87 | 269 |
MsG0680035290.01.T01 | MTR_8g046310 | 42.157 | 408 | 180 | 15 | 5 | 390 | 1 | 374 | 9.84e-87 | 268 |
MsG0680035290.01.T01 | MTR_6g080680 | 44.304 | 395 | 199 | 10 | 4 | 388 | 6 | 389 | 1.81e-86 | 268 |
MsG0680035290.01.T01 | MTR_2g104280 | 41.687 | 415 | 200 | 14 | 8 | 394 | 5 | 405 | 2.25e-85 | 265 |
MsG0680035290.01.T01 | MTR_2g066200 | 41.827 | 416 | 183 | 16 | 7 | 393 | 2 | 387 | 3.30e-85 | 265 |
MsG0680035290.01.T01 | MTR_7g017170 | 43.645 | 417 | 183 | 14 | 11 | 394 | 12 | 409 | 3.93e-85 | 265 |
MsG0680035290.01.T01 | MTR_5g069390 | 40.399 | 401 | 221 | 8 | 10 | 394 | 19 | 417 | 3.91e-84 | 265 |
MsG0680035290.01.T01 | MTR_7g111700 | 42.155 | 427 | 152 | 15 | 1 | 394 | 1 | 365 | 4.75e-84 | 261 |
MsG0680035290.01.T01 | MTR_8g033140 | 40.521 | 422 | 195 | 14 | 13 | 395 | 15 | 419 | 7.78e-84 | 262 |
MsG0680035290.01.T01 | MTR_0831s0010 | 41.439 | 403 | 184 | 15 | 14 | 393 | 47 | 420 | 1.53e-83 | 261 |
MsG0680035290.01.T01 | MTR_4g028680 | 41.606 | 411 | 211 | 11 | 2 | 394 | 1 | 400 | 2.02e-83 | 260 |
MsG0680035290.01.T01 | MTR_2g034700 | 41.772 | 395 | 190 | 12 | 5 | 386 | 1 | 368 | 9.15e-83 | 258 |
MsG0680035290.01.T01 | MTR_3g011120 | 41.310 | 397 | 182 | 13 | 7 | 383 | 4 | 369 | 2.69e-82 | 256 |
MsG0680035290.01.T01 | MTR_4g028510 | 41.019 | 412 | 214 | 10 | 2 | 394 | 1 | 402 | 1.28e-81 | 258 |
MsG0680035290.01.T01 | MTR_5g097350 | 42.893 | 401 | 179 | 13 | 12 | 390 | 11 | 383 | 1.93e-81 | 254 |
MsG0680035290.01.T01 | MTR_1g007410 | 42.892 | 408 | 196 | 15 | 2 | 387 | 7 | 399 | 2.01e-81 | 255 |
MsG0680035290.01.T01 | MTR_2g065840 | 41.007 | 417 | 186 | 13 | 7 | 393 | 2 | 388 | 6.30e-81 | 253 |
MsG0680035290.01.T01 | MTR_5g096910 | 39.765 | 425 | 191 | 13 | 1 | 393 | 1 | 392 | 6.85e-81 | 253 |
MsG0680035290.01.T01 | MTR_2g066150 | 40.609 | 394 | 189 | 11 | 9 | 394 | 4 | 360 | 3.52e-80 | 251 |
MsG0680035290.01.T01 | MTR_8g064890 | 39.372 | 414 | 189 | 10 | 11 | 395 | 9 | 389 | 9.83e-80 | 250 |
MsG0680035290.01.T01 | MTR_4g028660 | 40.295 | 407 | 213 | 12 | 2 | 390 | 1 | 395 | 3.02e-79 | 249 |
MsG0680035290.01.T01 | MTR_4g027450 | 40.295 | 407 | 213 | 12 | 2 | 390 | 1 | 395 | 3.02e-79 | 249 |
MsG0680035290.01.T01 | MTR_4g130330 | 42.716 | 405 | 191 | 14 | 14 | 394 | 4 | 391 | 3.35e-79 | 249 |
MsG0680035290.01.T01 | MTR_8g467670 | 40.750 | 400 | 208 | 12 | 5 | 395 | 1 | 380 | 2.40e-78 | 247 |
MsG0680035290.01.T01 | MTR_2g065860 | 40.342 | 409 | 191 | 12 | 11 | 393 | 6 | 387 | 2.24e-77 | 244 |
MsG0680035290.01.T01 | MTR_8g039500 | 41.799 | 378 | 162 | 12 | 9 | 363 | 4 | 346 | 5.67e-77 | 242 |
MsG0680035290.01.T01 | MTR_8g046200 | 40.000 | 440 | 188 | 18 | 5 | 390 | 1 | 418 | 1.85e-76 | 243 |
MsG0680035290.01.T01 | MTR_8g046220 | 38.551 | 428 | 195 | 14 | 5 | 390 | 1 | 402 | 5.74e-76 | 241 |
MsG0680035290.01.T01 | MTR_7g079640 | 42.175 | 377 | 181 | 16 | 7 | 372 | 4 | 354 | 3.35e-74 | 236 |
MsG0680035290.01.T01 | MTR_5g072060 | 41.667 | 384 | 172 | 14 | 15 | 377 | 4 | 356 | 9.34e-74 | 241 |
MsG0680035290.01.T01 | MTR_4g014370 | 39.552 | 402 | 166 | 12 | 2 | 395 | 6 | 338 | 2.35e-73 | 232 |
MsG0680035290.01.T01 | MTR_5g091140 | 41.237 | 388 | 196 | 15 | 1 | 375 | 30 | 398 | 3.54e-73 | 234 |
MsG0680035290.01.T01 | MTR_1g007430 | 43.275 | 342 | 151 | 7 | 28 | 351 | 7 | 323 | 4.15e-73 | 231 |
MsG0680035290.01.T01 | MTR_5g092850 | 39.568 | 417 | 198 | 15 | 6 | 390 | 4 | 398 | 1.46e-72 | 233 |
MsG0680035290.01.T01 | MTR_8g064790 | 37.403 | 385 | 176 | 8 | 15 | 394 | 13 | 337 | 1.07e-71 | 228 |
MsG0680035290.01.T01 | MTR_8g032980 | 37.671 | 438 | 207 | 15 | 6 | 395 | 3 | 422 | 2.71e-71 | 229 |
MsG0680035290.01.T01 | MTR_8g036970 | 39.353 | 371 | 148 | 12 | 25 | 381 | 6 | 313 | 3.96e-71 | 228 |
MsG0680035290.01.T01 | MTR_4g028750 | 39.948 | 388 | 204 | 13 | 2 | 372 | 1 | 376 | 4.50e-71 | 228 |
MsG0680035290.01.T01 | MTR_8g013000 | 41.417 | 367 | 177 | 14 | 8 | 351 | 1 | 352 | 4.90e-71 | 229 |
MsG0680035290.01.T01 | MTR_2g064950 | 40.148 | 406 | 189 | 18 | 8 | 385 | 1 | 380 | 8.31e-71 | 228 |
MsG0680035290.01.T01 | MTR_1g053510 | 38.717 | 421 | 202 | 15 | 5 | 389 | 1 | 401 | 2.26e-70 | 227 |
MsG0680035290.01.T01 | MTR_8g033090 | 36.145 | 415 | 218 | 13 | 14 | 394 | 11 | 412 | 2.56e-69 | 224 |
MsG0680035290.01.T01 | MTR_4g007940 | 41.284 | 327 | 151 | 10 | 91 | 391 | 28 | 339 | 3.22e-68 | 219 |
MsG0680035290.01.T01 | MTR_8g063330 | 39.612 | 361 | 182 | 8 | 9 | 349 | 4 | 348 | 6.88e-67 | 220 |
MsG0680035290.01.T01 | MTR_5g074800 | 38.904 | 365 | 172 | 17 | 56 | 394 | 1 | 340 | 3.17e-66 | 214 |
MsG0680035290.01.T01 | MTR_7g016930 | 43.544 | 333 | 144 | 11 | 10 | 330 | 9 | 309 | 4.49e-66 | 213 |
MsG0680035290.01.T01 | MTR_8g033110 | 36.077 | 413 | 224 | 10 | 14 | 394 | 11 | 415 | 4.69e-66 | 216 |
MsG0680035290.01.T01 | MTR_5g024260 | 39.474 | 380 | 195 | 15 | 14 | 372 | 19 | 384 | 8.23e-66 | 215 |
MsG0680035290.01.T01 | MTR_8g018110 | 36.691 | 417 | 198 | 12 | 14 | 394 | 11 | 397 | 6.81e-65 | 212 |
MsG0680035290.01.T01 | MTR_5g022850 | 39.118 | 363 | 185 | 11 | 54 | 394 | 5 | 353 | 9.86e-65 | 211 |
MsG0680035290.01.T01 | MTR_6g079790 | 41.270 | 315 | 155 | 11 | 103 | 394 | 2 | 309 | 1.86e-63 | 206 |
MsG0680035290.01.T01 | MTR_6g090250 | 38.366 | 404 | 187 | 13 | 35 | 389 | 29 | 419 | 1.02e-62 | 207 |
MsG0680035290.01.T01 | MTR_5g064700 | 37.405 | 393 | 167 | 15 | 56 | 394 | 1 | 368 | 5.27e-62 | 204 |
MsG0680035290.01.T01 | MTR_5g074850 | 36.908 | 401 | 203 | 15 | 2 | 371 | 20 | 401 | 7.84e-62 | 214 |
MsG0680035290.01.T01 | MTR_6g078010 | 39.193 | 347 | 183 | 9 | 54 | 389 | 1 | 330 | 1.48e-61 | 202 |
MsG0680035290.01.T01 | MTR_1g098180 | 34.940 | 415 | 186 | 12 | 4 | 391 | 6 | 363 | 4.83e-61 | 201 |
MsG0680035290.01.T01 | MTR_5g023970 | 53.125 | 192 | 84 | 3 | 204 | 394 | 10 | 196 | 6.77e-61 | 195 |
MsG0680035290.01.T01 | MTR_7g104710 | 42.638 | 326 | 129 | 12 | 2 | 309 | 1 | 286 | 1.88e-59 | 196 |
MsG0680035290.01.T01 | MTR_5g076490 | 40.599 | 367 | 161 | 16 | 54 | 394 | 1 | 336 | 5.32e-59 | 195 |
MsG0680035290.01.T01 | MTR_5g096900 | 42.771 | 332 | 139 | 13 | 12 | 317 | 7 | 313 | 2.14e-58 | 193 |
MsG0680035290.01.T01 | MTR_1g050312 | 39.610 | 308 | 142 | 10 | 89 | 386 | 14 | 287 | 2.06e-56 | 187 |
MsG0680035290.01.T01 | MTR_5g075370 | 36.667 | 390 | 198 | 14 | 14 | 371 | 5 | 377 | 9.29e-56 | 196 |
MsG0680035290.01.T01 | MTR_7g023800 | 37.941 | 340 | 163 | 9 | 56 | 385 | 1 | 302 | 3.38e-55 | 184 |
MsG0680035290.01.T01 | MTR_6g004450 | 44.444 | 234 | 102 | 6 | 164 | 393 | 59 | 268 | 6.10e-55 | 182 |
MsG0680035290.01.T01 | MTR_5g043605 | 34.074 | 405 | 178 | 13 | 3 | 394 | 11 | 339 | 1.02e-53 | 182 |
MsG0680035290.01.T01 | MTR_6g087620 | 37.086 | 302 | 159 | 7 | 91 | 384 | 1 | 279 | 4.04e-53 | 178 |
MsG0680035290.01.T01 | MTR_8g063370 | 31.250 | 400 | 224 | 11 | 6 | 386 | 17 | 384 | 5.57e-53 | 181 |
MsG0680035290.01.T01 | MTR_5g092860 | 36.986 | 365 | 168 | 14 | 35 | 371 | 20 | 350 | 3.56e-52 | 178 |
MsG0680035290.01.T01 | MTR_5g068490 | 38.721 | 297 | 155 | 11 | 100 | 395 | 8 | 278 | 5.39e-52 | 175 |
MsG0680035290.01.T01 | MTR_6g090260 | 48.677 | 189 | 89 | 3 | 205 | 389 | 75 | 259 | 5.89e-52 | 174 |
MsG0680035290.01.T01 | MTR_8g063310 | 32.840 | 405 | 227 | 14 | 4 | 386 | 8 | 389 | 2.30e-50 | 174 |
MsG0680035290.01.T01 | MTR_2g021920 | 45.106 | 235 | 113 | 8 | 162 | 390 | 45 | 269 | 8.24e-50 | 169 |
MsG0680035290.01.T01 | MTR_5g086590 | 42.149 | 242 | 97 | 8 | 138 | 363 | 14 | 228 | 5.68e-49 | 166 |
MsG0680035290.01.T01 | MTR_8g033000 | 34.456 | 386 | 185 | 15 | 54 | 394 | 1 | 363 | 3.04e-47 | 165 |
MsG0680035290.01.T01 | MTR_5g097850 | 36.972 | 284 | 116 | 10 | 120 | 393 | 14 | 244 | 3.49e-47 | 162 |
MsG0680035290.01.T01 | MTR_8g063350 | 32.468 | 385 | 181 | 14 | 17 | 384 | 14 | 336 | 2.15e-45 | 160 |
MsG0680035290.01.T01 | MTR_5g094350 | 37.627 | 295 | 115 | 9 | 13 | 270 | 9 | 271 | 7.99e-44 | 154 |
MsG0680035290.01.T01 | MTR_5g097820 | 40.000 | 285 | 122 | 14 | 1 | 258 | 7 | 269 | 2.16e-43 | 152 |
MsG0680035290.01.T01 | MTR_3g018750 | 41.850 | 227 | 101 | 7 | 188 | 394 | 26 | 241 | 2.32e-42 | 149 |
MsG0680035290.01.T01 | MTR_8g073570 | 50.000 | 166 | 75 | 4 | 8 | 172 | 1 | 159 | 2.46e-41 | 144 |
MsG0680035290.01.T01 | MTR_1g076810 | 40.551 | 254 | 104 | 9 | 9 | 237 | 10 | 241 | 2.74e-39 | 149 |
MsG0680035290.01.T01 | MTR_6g070880 | 38.934 | 244 | 114 | 9 | 12 | 228 | 27 | 262 | 1.57e-37 | 137 |
MsG0680035290.01.T01 | MTR_6g071420 | 38.934 | 244 | 114 | 9 | 12 | 228 | 27 | 262 | 1.57e-37 | 137 |
MsG0680035290.01.T01 | MTR_7g019250 | 36.140 | 285 | 142 | 8 | 95 | 371 | 161 | 413 | 3.64e-37 | 140 |
MsG0680035290.01.T01 | MTR_5g066420 | 44.079 | 152 | 78 | 2 | 236 | 383 | 1 | 149 | 1.69e-36 | 130 |
MsG0680035290.01.T01 | MTR_4g016000 | 39.352 | 216 | 87 | 6 | 142 | 342 | 2 | 188 | 1.78e-36 | 132 |
MsG0680035290.01.T01 | MTR_6g009350 | 40.299 | 201 | 94 | 6 | 162 | 357 | 16 | 195 | 9.98e-36 | 130 |
MsG0680035290.01.T01 | MTR_3g030620 | 45.342 | 161 | 85 | 3 | 234 | 392 | 21 | 180 | 1.07e-35 | 129 |
MsG0680035290.01.T01 | MTR_1g050308 | 40.889 | 225 | 119 | 6 | 3 | 222 | 21 | 236 | 1.25e-35 | 134 |
MsG0680035290.01.T01 | MTR_1g050308 | 48.246 | 114 | 54 | 2 | 284 | 395 | 238 | 348 | 5.81e-24 | 102 |
MsG0680035290.01.T01 | MTR_5g037190 | 38.214 | 280 | 124 | 10 | 2 | 261 | 1 | 251 | 1.29e-35 | 131 |
MsG0680035290.01.T01 | MTR_6g079730 | 47.059 | 136 | 68 | 1 | 254 | 389 | 14 | 145 | 9.70e-35 | 125 |
MsG0680035290.01.T01 | MTR_1g115205 | 36.704 | 267 | 98 | 8 | 1 | 243 | 17 | 236 | 7.34e-34 | 127 |
MsG0680035290.01.T01 | MTR_5g098950 | 35.470 | 234 | 88 | 5 | 135 | 351 | 86 | 273 | 8.44e-34 | 127 |
MsG0680035290.01.T01 | MTR_8g035690 | 35.857 | 251 | 124 | 9 | 164 | 393 | 68 | 302 | 1.18e-33 | 127 |
MsG0680035290.01.T01 | MTR_2g104260 | 36.972 | 284 | 141 | 9 | 7 | 264 | 4 | 275 | 5.72e-33 | 125 |
MsG0680035290.01.T01 | MTR_7g101200 | 37.333 | 225 | 91 | 9 | 138 | 349 | 39 | 226 | 2.12e-32 | 122 |
MsG0680035290.01.T01 | MTR_6g465360 | 40.000 | 245 | 101 | 12 | 3 | 213 | 49 | 281 | 3.84e-32 | 123 |
MsG0680035290.01.T01 | MTR_5g036250 | 62.195 | 82 | 30 | 1 | 305 | 386 | 23 | 103 | 1.33e-31 | 119 |
MsG0680035290.01.T01 | MTR_7g017150 | 42.500 | 200 | 103 | 7 | 199 | 394 | 76 | 267 | 6.30e-30 | 116 |
MsG0680035290.01.T01 | MTR_5g096920 | 40.506 | 158 | 85 | 3 | 236 | 392 | 1 | 150 | 1.68e-29 | 112 |
MsG0680035290.01.T01 | MTR_7g017120 | 40.455 | 220 | 110 | 9 | 188 | 394 | 55 | 266 | 2.66e-29 | 115 |
MsG0680035290.01.T01 | MTR_5g086780 | 44.361 | 133 | 70 | 2 | 241 | 370 | 97 | 228 | 1.33e-28 | 112 |
MsG0680035290.01.T01 | MTR_5g086780 | 52.500 | 80 | 31 | 2 | 1 | 80 | 1 | 73 | 1.36e-15 | 75.9 |
MsG0680035290.01.T01 | MTR_5g097540 | 43.243 | 148 | 71 | 5 | 205 | 351 | 97 | 232 | 2.96e-27 | 110 |
MsG0680035290.01.T01 | MTR_2g022020 | 50.980 | 102 | 48 | 1 | 289 | 390 | 17 | 116 | 8.19e-27 | 103 |
MsG0680035290.01.T01 | MTR_5g097660 | 45.455 | 110 | 59 | 1 | 282 | 390 | 7 | 116 | 1.90e-26 | 102 |
MsG0680035290.01.T01 | MTR_1g047080 | 29.700 | 367 | 148 | 18 | 54 | 394 | 1 | 283 | 1.18e-25 | 105 |
MsG0680035290.01.T01 | MTR_5g096070 | 39.306 | 173 | 67 | 6 | 8 | 173 | 14 | 155 | 8.11e-23 | 94.4 |
MsG0680035290.01.T01 | MTR_3g047580 | 38.312 | 154 | 61 | 5 | 5 | 151 | 1 | 127 | 5.16e-22 | 91.3 |
MsG0680035290.01.T01 | MTR_5g097650 | 38.854 | 157 | 76 | 5 | 10 | 160 | 13 | 155 | 7.21e-22 | 91.7 |
MsG0680035290.01.T01 | MTR_4g133170 | 24.317 | 366 | 234 | 12 | 19 | 373 | 6 | 339 | 1.04e-20 | 93.2 |
MsG0680035290.01.T01 | MTR_2g024110 | 23.604 | 394 | 246 | 16 | 17 | 389 | 4 | 363 | 7.38e-19 | 87.8 |
MsG0680035290.01.T01 | MTR_1g068835 | 25.330 | 379 | 230 | 18 | 20 | 382 | 7 | 348 | 1.55e-18 | 87.0 |
MsG0680035290.01.T01 | MTR_1g097560 | 27.132 | 387 | 219 | 17 | 14 | 386 | 33 | 370 | 1.60e-18 | 86.7 |
MsG0680035290.01.T01 | MTR_1g097490 | 26.738 | 374 | 226 | 18 | 3 | 367 | 35 | 369 | 4.26e-18 | 85.5 |
MsG0680035290.01.T01 | MTR_4g094400 | 42.308 | 104 | 50 | 2 | 234 | 327 | 8 | 111 | 7.06e-18 | 79.7 |
MsG0680035290.01.T01 | MTR_1g050305 | 51.220 | 82 | 35 | 2 | 296 | 372 | 22 | 103 | 1.12e-17 | 79.7 |
MsG0680035290.01.T01 | MTR_3g019290 | 35.593 | 177 | 58 | 5 | 14 | 172 | 11 | 149 | 1.41e-17 | 80.5 |
MsG0680035290.01.T01 | MTR_5g096050 | 43.519 | 108 | 46 | 2 | 236 | 332 | 1 | 104 | 6.94e-17 | 76.6 |
MsG0680035290.01.T01 | MTR_1g061330 | 25.676 | 370 | 211 | 17 | 5 | 357 | 1 | 323 | 1.11e-16 | 81.3 |
MsG0680035290.01.T01 | MTR_5g048160 | 25.882 | 425 | 231 | 19 | 5 | 386 | 1 | 384 | 1.69e-16 | 80.9 |
MsG0680035290.01.T01 | MTR_3g097190 | 62.963 | 54 | 20 | 0 | 314 | 367 | 28 | 81 | 1.88e-16 | 77.4 |
MsG0680035290.01.T01 | MTR_6g065980 | 26.019 | 319 | 172 | 15 | 20 | 327 | 19 | 284 | 2.05e-16 | 80.5 |
MsG0680035290.01.T01 | MTR_2g028110 | 24.722 | 360 | 220 | 13 | 25 | 367 | 12 | 337 | 8.02e-16 | 79.0 |
MsG0680035290.01.T01 | MTR_1g097330 | 26.738 | 374 | 211 | 18 | 20 | 373 | 19 | 349 | 5.43e-15 | 76.6 |
MsG0680035290.01.T01 | MTR_5g057790 | 24.845 | 322 | 200 | 10 | 20 | 334 | 49 | 335 | 8.72e-15 | 75.9 |
MsG0680035290.01.T01 | MTR_3g009240 | 25.714 | 315 | 188 | 11 | 20 | 327 | 39 | 314 | 2.00e-14 | 74.7 |
MsG0680035290.01.T01 | MTR_5g057710 | 25.758 | 330 | 193 | 13 | 20 | 337 | 49 | 338 | 4.29e-14 | 73.6 |
MsG0680035290.01.T01 | MTR_3g047540 | 50.000 | 72 | 33 | 2 | 205 | 276 | 6 | 74 | 1.15e-13 | 66.6 |
MsG0680035290.01.T01 | MTR_4g023080 | 24.685 | 397 | 238 | 16 | 11 | 394 | 3 | 351 | 2.89e-13 | 70.9 |
MsG0680035290.01.T01 | MTR_0667s0010 | 23.177 | 384 | 236 | 16 | 13 | 366 | 2 | 356 | 3.13e-13 | 71.2 |
MsG0680035290.01.T01 | MTR_2g046830 | 26.667 | 315 | 194 | 13 | 19 | 329 | 27 | 308 | 3.31e-13 | 70.9 |
MsG0680035290.01.T01 | MTR_0760s0010 | 26.667 | 315 | 170 | 13 | 25 | 327 | 55 | 320 | 3.90e-13 | 70.9 |
MsG0680035290.01.T01 | MTR_3g083640 | 25.733 | 307 | 185 | 12 | 25 | 326 | 63 | 331 | 4.63e-13 | 70.5 |
MsG0680035290.01.T01 | MTR_5g091150 | 30.734 | 218 | 92 | 10 | 85 | 300 | 24 | 184 | 5.06e-13 | 67.8 |
MsG0680035290.01.T01 | MTR_8g041440 | 52.174 | 69 | 31 | 1 | 8 | 74 | 6 | 74 | 6.38e-13 | 65.5 |
MsG0680035290.01.T01 | MTR_3g009260 | 26.837 | 313 | 184 | 16 | 20 | 327 | 44 | 316 | 1.56e-12 | 68.9 |
MsG0680035290.01.T01 | MTR_4g031770 | 26.911 | 327 | 192 | 16 | 20 | 337 | 7 | 295 | 2.02e-12 | 68.6 |
MsG0680035290.01.T01 | MTR_3g013770 | 25.185 | 405 | 218 | 18 | 20 | 388 | 36 | 391 | 2.43e-12 | 68.2 |
MsG0680035290.01.T01 | MTR_7g407070 | 26.087 | 322 | 203 | 11 | 20 | 327 | 35 | 335 | 2.56e-12 | 68.2 |
MsG0680035290.01.T01 | MTR_2g021190 | 25.459 | 381 | 235 | 17 | 20 | 386 | 24 | 369 | 2.59e-12 | 68.2 |
MsG0680035290.01.T01 | MTR_3g014540 | 24.190 | 401 | 227 | 18 | 17 | 388 | 29 | 381 | 2.72e-12 | 68.2 |
MsG0680035290.01.T01 | MTR_2g026010 | 23.592 | 373 | 232 | 19 | 36 | 389 | 23 | 361 | 4.44e-12 | 67.4 |
MsG0680035290.01.T01 | MTR_1g068875 | 22.798 | 386 | 244 | 17 | 20 | 389 | 7 | 354 | 4.73e-12 | 67.4 |
MsG0680035290.01.T01 | MTR_2g028160 | 26.331 | 338 | 193 | 16 | 20 | 329 | 8 | 317 | 5.67e-12 | 67.4 |
MsG0680035290.01.T01 | MTR_1g009110 | 22.989 | 348 | 218 | 15 | 5 | 333 | 1 | 317 | 6.34e-12 | 67.0 |
MsG0680035290.01.T01 | MTR_3g030250 | 25.220 | 341 | 206 | 16 | 20 | 357 | 40 | 334 | 7.99e-12 | 66.6 |
MsG0680035290.01.T01 | MTR_2g046920 | 24.713 | 348 | 210 | 15 | 19 | 350 | 26 | 337 | 1.12e-11 | 66.2 |
MsG0680035290.01.T01 | MTR_7g070440 | 26.866 | 335 | 189 | 15 | 17 | 330 | 7 | 306 | 1.16e-11 | 66.2 |
MsG0680035290.01.T01 | MTR_7g055870 | 24.368 | 435 | 247 | 19 | 5 | 378 | 1 | 414 | 1.74e-11 | 65.9 |
MsG0680035290.01.T01 | MTR_3g006570 | 24.090 | 357 | 201 | 17 | 20 | 357 | 24 | 329 | 2.05e-11 | 65.5 |
MsG0680035290.01.T01 | MTR_3g024150 | 26.667 | 315 | 186 | 14 | 20 | 327 | 38 | 314 | 2.72e-11 | 65.1 |
MsG0680035290.01.T01 | MTR_7g055930 | 24.368 | 435 | 247 | 19 | 5 | 378 | 1 | 414 | 2.90e-11 | 65.1 |
MsG0680035290.01.T01 | MTR_3g007270 | 27.950 | 322 | 194 | 15 | 20 | 330 | 50 | 344 | 4.78e-11 | 64.3 |
MsG0680035290.01.T01 | MTR_1g068860 | 25.410 | 366 | 214 | 17 | 20 | 364 | 7 | 334 | 5.70e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680035290.01.T01 | AT3G06240 | 24.747 | 396 | 227 | 15 | 20 | 375 | 39 | 403 | 2.68e-13 | 71.6 |
MsG0680035290.01.T01 | AT3G22730 | 26.437 | 261 | 149 | 10 | 20 | 270 | 9 | 236 | 4.52e-12 | 67.4 |
MsG0680035290.01.T01 | AT4G12560 | 25.700 | 393 | 211 | 17 | 17 | 372 | 4 | 352 | 3.04e-11 | 65.1 |
MsG0680035290.01.T01 | AT4G12560 | 25.700 | 393 | 211 | 17 | 17 | 372 | 4 | 352 | 3.04e-11 | 65.1 |
MsG0680035290.01.T01 | AT4G12560 | 25.700 | 393 | 211 | 17 | 17 | 372 | 4 | 352 | 3.04e-11 | 65.1 |
Find 80 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAGTGTTGTATTTGCTTTC+TGG | 0.092591 | 6:-101551452 | MsG0680035290.01.T01:CDS |
CGATACATGTTCATGAAAAT+AGG | 0.168623 | 6:+101551566 | None:intergenic |
TCCAACTATCGACGAATTTA+AGG | 0.198800 | 6:-101551291 | MsG0680035290.01.T01:CDS |
CTTCCTATTGGAGGAATAAA+TGG | 0.205054 | 6:-101550499 | MsG0680035290.01.T01:CDS |
TTGATTGATAATTTAGATTC+TGG | 0.269341 | 6:-101550844 | MsG0680035290.01.T01:CDS |
TGGACTAAACTCTTCATTCT+TGG | 0.283281 | 6:-101550694 | MsG0680035290.01.T01:CDS |
GTTGGACAGATGTTGTATTA+TGG | 0.287675 | 6:-101551316 | MsG0680035290.01.T01:CDS |
TTATGATAATGACGCATATT+TGG | 0.300363 | 6:-101550920 | MsG0680035290.01.T01:CDS |
CTCTTGGAGGAAACTTGATT+TGG | 0.301948 | 6:-101551022 | MsG0680035290.01.T01:CDS |
CCTGGCGTTGATCATCCTAT+TGG | 0.302083 | 6:-101550664 | MsG0680035290.01.T01:CDS |
TCCTCCAAGAGTTGCTTCTT+AGG | 0.317121 | 6:+101551034 | None:intergenic |
ATTCTGGATGTGAGATTAGA+TGG | 0.320670 | 6:-101550828 | MsG0680035290.01.T01:CDS |
CCTATTGGAGTGGGAAATAA+TGG | 0.322048 | 6:-101550649 | MsG0680035290.01.T01:CDS |
AAGGAAAGCCATCTTCCTAT+TGG | 0.343665 | 6:-101550511 | MsG0680035290.01.T01:CDS |
AATCATATTCATAATGATAT+TGG | 0.348507 | 6:-101551674 | MsG0680035290.01.T01:CDS |
TTTGAGAATAAAGTCAAGTT+AGG | 0.352146 | 6:-101551422 | MsG0680035290.01.T01:CDS |
GGACTAAACTCTTCATTCTT+GGG | 0.353699 | 6:-101550693 | MsG0680035290.01.T01:CDS |
GATACATGTTCATGAAAATA+GGG | 0.354057 | 6:+101551567 | None:intergenic |
ACCTTAAATTCGTCGATAGT+TGG | 0.366435 | 6:+101551290 | None:intergenic |
CCATTATTTCCCACTCCAAT+AGG | 0.368274 | 6:+101550649 | None:intergenic |
TAACCATTTATTCCTCCAAT+AGG | 0.370916 | 6:+101550496 | None:intergenic |
TAGAGGCAATTTCGAGAGAA+TGG | 0.406497 | 6:+101551646 | None:intergenic |
ATTTGAATGGAGTGTGTCAT+TGG | 0.422750 | 6:-101550957 | MsG0680035290.01.T01:CDS |
TTGTTTGTCTTTACCGTAGT+TGG | 0.424898 | 6:-101551334 | MsG0680035290.01.T01:CDS |
GGATTCTCTTTCAACTGAAA+AGG | 0.426487 | 6:-101551702 | MsG0680035290.01.T01:CDS |
GAGATGATGACGAACTGGTT+TGG | 0.427092 | 6:-101550609 | MsG0680035290.01.T01:CDS |
CCTCCATCTTCTGAGTTCTC+AGG | 0.431623 | 6:+101550581 | None:intergenic |
GATCTCATATTATGACAAAT+CGG | 0.443760 | 6:-101550764 | MsG0680035290.01.T01:CDS |
GCCTAAGAAGCAACTCTTGG+AGG | 0.448550 | 6:-101551035 | MsG0680035290.01.T01:CDS |
ATGTTAGAGATATGACTATA+AGG | 0.448586 | 6:-101551184 | MsG0680035290.01.T01:intron |
CAGAAGAGATGATGACGAAC+TGG | 0.451171 | 6:-101550614 | MsG0680035290.01.T01:CDS |
TGGATATGCCTTGTGGTATG+AGG | 0.455110 | 6:-101551002 | MsG0680035290.01.T01:CDS |
ATATTAGGTTCCGTTATTAA+CGG | 0.455989 | 6:-101551359 | MsG0680035290.01.T01:CDS |
AACTTGGTGTGAAGGAGTCT+TGG | 0.456259 | 6:-101550714 | MsG0680035290.01.T01:CDS |
GGATGATCAACGCCAGGAAA+AGG | 0.457144 | 6:+101550670 | None:intergenic |
TAAATTATCAATCAAAGCTA+AGG | 0.470808 | 6:+101550852 | None:intergenic |
TTATTCCTCCAATAGGAAGA+TGG | 0.473798 | 6:+101550503 | None:intergenic |
GCAGATCTAGAGTCTGTTGT+AGG | 0.478229 | 6:+101551495 | None:intergenic |
ACCCTGGGCTCTAACTCAGC+AGG | 0.490821 | 6:+101551254 | None:intergenic |
GGTGTCTATGTGTATTTGAA+TGG | 0.491909 | 6:-101550970 | MsG0680035290.01.T01:CDS |
ACAGCCTAAGAAGCAACTCT+TGG | 0.496883 | 6:-101551038 | MsG0680035290.01.T01:CDS |
AACACTCGAAGATCATCAAA+TGG | 0.517712 | 6:+101551467 | None:intergenic |
ATGGAAGATGAGACACTTGA+CGG | 0.518099 | 6:-101550809 | MsG0680035290.01.T01:CDS |
TTGTCAGGTAGTCATTTACA+AGG | 0.523582 | 6:-101550530 | MsG0680035290.01.T01:CDS |
TTACGCTCTTTAAAAGGAGG+TGG | 0.527362 | 6:+101551395 | None:intergenic |
ACAAACAATTCCGTTAATAA+CGG | 0.528249 | 6:+101551349 | None:intergenic |
ATGGAGGAGCTTGGTATCAA+AGG | 0.529476 | 6:-101550565 | MsG0680035290.01.T01:CDS |
GCCCTGCTGAGTTAGAGCCC+AGG | 0.539941 | 6:-101551256 | MsG0680035290.01.T01:CDS |
GAATGGAGTGTGTCATTGGT+GGG | 0.545341 | 6:-101550953 | MsG0680035290.01.T01:CDS |
TGAATGGAGTGTGTCATTGG+TGG | 0.549408 | 6:-101550954 | MsG0680035290.01.T01:CDS |
GAAAGCCATCTTCCTATTGG+AGG | 0.550432 | 6:-101550508 | MsG0680035290.01.T01:CDS |
TGTATTTGCTTTCTGGTGAG+AGG | 0.553262 | 6:-101551445 | MsG0680035290.01.T01:CDS |
CCCTGCTGAGTTAGAGCCCA+GGG | 0.555105 | 6:-101551255 | MsG0680035290.01.T01:intron |
ACTCAGAAGATGGAGGAGCT+TGG | 0.556213 | 6:-101550574 | MsG0680035290.01.T01:CDS |
TAACCTGAGAACTCAGAAGA+TGG | 0.557931 | 6:-101550584 | MsG0680035290.01.T01:CDS |
CACCTCCTTGCTTAAGTCAA+AGG | 0.558121 | 6:+101550894 | None:intergenic |
CGCTACGATGATGAAATCGA+TGG | 0.564261 | 6:-101551723 | None:intergenic |
TGCGTCATTATCATAATCAT+CGG | 0.565021 | 6:+101550927 | None:intergenic |
TTAGATCCGCAAGTAAATCA+TGG | 0.569653 | 6:-101551607 | MsG0680035290.01.T01:CDS |
CCAATAGGATGATCAACGCC+AGG | 0.570347 | 6:+101550664 | None:intergenic |
GATCTAGAGTCTGTTGTAGG+AGG | 0.576661 | 6:+101551498 | None:intergenic |
ATACAACATCTGTCCAACTA+CGG | 0.581071 | 6:+101551321 | None:intergenic |
GGTGTCCTTTGACTTAAGCA+AGG | 0.592013 | 6:-101550899 | MsG0680035290.01.T01:CDS |
TTTGGGTGAACTTGGTGTGA+AGG | 0.593697 | 6:-101550722 | MsG0680035290.01.T01:CDS |
CGTTGATCATCCTATTGGAG+TGG | 0.597720 | 6:-101550659 | MsG0680035290.01.T01:CDS |
GCGTGTCACGTGACGATGTG+TGG | 0.603092 | 6:-101551068 | MsG0680035290.01.T01:CDS |
GCATGACCATGATTTACTTG+CGG | 0.609080 | 6:+101551601 | None:intergenic |
AAATTATCAATCAAAGCTAA+GGG | 0.609135 | 6:+101550853 | None:intergenic |
GTTGATCATCCTATTGGAGT+GGG | 0.610536 | 6:-101550658 | MsG0680035290.01.T01:CDS |
CCCTGGGCTCTAACTCAGCA+GGG | 0.619909 | 6:+101551255 | None:intergenic |
GACTATGAAATTGAAAGTGA+TGG | 0.624850 | 6:-101551126 | MsG0680035290.01.T01:CDS |
TTTCATATCTGATGCTTACG+AGG | 0.632612 | 6:-101551537 | MsG0680035290.01.T01:CDS |
TGTGGTATGAGGATTAATGT+AGG | 0.648248 | 6:-101550991 | MsG0680035290.01.T01:CDS |
CTTGATTTGGATATGCCTTG+TGG | 0.655058 | 6:-101551009 | MsG0680035290.01.T01:CDS |
CGTGTCACGTGACGATGTGT+GGG | 0.658175 | 6:-101551067 | MsG0680035290.01.T01:CDS |
CCTGAGAACTCAGAAGATGG+AGG | 0.675309 | 6:-101550581 | MsG0680035290.01.T01:CDS |
AGCTTGGTATCAAAGGCAGT+AGG | 0.678598 | 6:-101550558 | MsG0680035290.01.T01:CDS |
GTCCTTTGACTTAAGCAAGG+AGG | 0.681294 | 6:-101550896 | MsG0680035290.01.T01:CDS |
TCTGATGCTTACGAGGACGA+TGG | 0.691804 | 6:-101551530 | MsG0680035290.01.T01:CDS |
ACATTAATCCTCATACCACA+AGG | 0.704516 | 6:+101550994 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCATATTCATAATGATAT+TGG | - | Chr6:101550537-101550556 | MsG0680035290.01.T01:CDS | 15.0% |
!! | AAATTATCAATCAAAGCTAA+GGG | + | Chr6:101551361-101551380 | None:intergenic | 20.0% |
!! | TAAATTATCAATCAAAGCTA+AGG | + | Chr6:101551362-101551381 | None:intergenic | 20.0% |
!!! | AAAAACTCTGGTTTTATATT+AGG | - | Chr6:101550837-101550856 | MsG0680035290.01.T01:CDS | 20.0% |
!!! | TTGATTGATAATTTAGATTC+TGG | - | Chr6:101551367-101551386 | MsG0680035290.01.T01:CDS | 20.0% |
! | ACAAACAATTCCGTTAATAA+CGG | + | Chr6:101550865-101550884 | None:intergenic | 25.0% |
! | ATATTAGGTTCCGTTATTAA+CGG | - | Chr6:101550852-101550871 | MsG0680035290.01.T01:CDS | 25.0% |
! | ATGTTAGAGATATGACTATA+AGG | - | Chr6:101551027-101551046 | MsG0680035290.01.T01:CDS | 25.0% |
! | GATACATGTTCATGAAAATA+GGG | + | Chr6:101550647-101550666 | None:intergenic | 25.0% |
! | GATCTCATATTATGACAAAT+CGG | - | Chr6:101551447-101551466 | MsG0680035290.01.T01:CDS | 25.0% |
! | TTTGAGAATAAAGTCAAGTT+AGG | - | Chr6:101550789-101550808 | MsG0680035290.01.T01:CDS | 25.0% |
!! | AATCTCTTCAAAGATTTTAG+AGG | + | Chr6:101550585-101550604 | None:intergenic | 25.0% |
!! | GCTTTTCACATATCAATTTT+GGG | - | Chr6:101551472-101551491 | MsG0680035290.01.T01:CDS | 25.0% |
!! | TGCTTTTCACATATCAATTT+TGG | - | Chr6:101551471-101551490 | MsG0680035290.01.T01:CDS | 25.0% |
!! | TTATGATAATGACGCATATT+TGG | - | Chr6:101551291-101551310 | MsG0680035290.01.T01:CDS | 25.0% |
CGATACATGTTCATGAAAAT+AGG | + | Chr6:101550648-101550667 | None:intergenic | 30.0% | |
GACTATGAAATTGAAAGTGA+TGG | - | Chr6:101551085-101551104 | MsG0680035290.01.T01:CDS | 30.0% | |
TAACCATTTATTCCTCCAAT+AGG | + | Chr6:101551718-101551737 | None:intergenic | 30.0% | |
TGCGTCATTATCATAATCAT+CGG | + | Chr6:101551287-101551306 | None:intergenic | 30.0% | |
! | GAGTTTTTACGCTCTTTAAA+AGG | + | Chr6:101550825-101550844 | None:intergenic | 30.0% |
! | TTTAAAGAGCGTAAAAACTC+TGG | - | Chr6:101550825-101550844 | MsG0680035290.01.T01:CDS | 30.0% |
!! | ATATCAATTTTGGGTGAACT+TGG | - | Chr6:101551481-101551500 | MsG0680035290.01.T01:CDS | 30.0% |
!! | TTTTTACGCTCTTTAAAAGG+AGG | + | Chr6:101550822-101550841 | None:intergenic | 30.0% |
AACACTCGAAGATCATCAAA+TGG | + | Chr6:101550747-101550766 | None:intergenic | 35.0% | |
ACATTAATCCTCATACCACA+AGG | + | Chr6:101551220-101551239 | None:intergenic | 35.0% | |
ACCTTAAATTCGTCGATAGT+TGG | + | Chr6:101550924-101550943 | None:intergenic | 35.0% | |
ATACAACATCTGTCCAACTA+CGG | + | Chr6:101550893-101550912 | None:intergenic | 35.0% | |
ATTCTGGATGTGAGATTAGA+TGG | - | Chr6:101551383-101551402 | MsG0680035290.01.T01:CDS | 35.0% | |
ATTTGAATGGAGTGTGTCAT+TGG | - | Chr6:101551254-101551273 | MsG0680035290.01.T01:intron | 35.0% | |
CGATATATGCTTCATGGATT+TGG | - | Chr6:101550996-101551015 | MsG0680035290.01.T01:CDS | 35.0% | |
CTTCCTATTGGAGGAATAAA+TGG | - | Chr6:101551712-101551731 | MsG0680035290.01.T01:CDS | 35.0% | |
GGACTAAACTCTTCATTCTT+GGG | - | Chr6:101551518-101551537 | MsG0680035290.01.T01:CDS | 35.0% | |
GGATTCTCTTTCAACTGAAA+AGG | - | Chr6:101550509-101550528 | MsG0680035290.01.T01:CDS | 35.0% | |
GGTGTCTATGTGTATTTGAA+TGG | - | Chr6:101551241-101551260 | MsG0680035290.01.T01:intron | 35.0% | |
GTTGGACAGATGTTGTATTA+TGG | - | Chr6:101550895-101550914 | MsG0680035290.01.T01:CDS | 35.0% | |
TCCAACTATCGACGAATTTA+AGG | - | Chr6:101550920-101550939 | MsG0680035290.01.T01:CDS | 35.0% | |
TGGACTAAACTCTTCATTCT+TGG | - | Chr6:101551517-101551536 | MsG0680035290.01.T01:CDS | 35.0% | |
TGTGGTATGAGGATTAATGT+AGG | - | Chr6:101551220-101551239 | MsG0680035290.01.T01:intron | 35.0% | |
TTAGATCCGCAAGTAAATCA+TGG | - | Chr6:101550604-101550623 | MsG0680035290.01.T01:CDS | 35.0% | |
TTATTCCTCCAATAGGAAGA+TGG | + | Chr6:101551711-101551730 | None:intergenic | 35.0% | |
TTGTCAGGTAGTCATTTACA+AGG | - | Chr6:101551681-101551700 | MsG0680035290.01.T01:CDS | 35.0% | |
TTGTTTGTCTTTACCGTAGT+TGG | - | Chr6:101550877-101550896 | MsG0680035290.01.T01:CDS | 35.0% | |
TTTCATATCTGATGCTTACG+AGG | - | Chr6:101550674-101550693 | MsG0680035290.01.T01:CDS | 35.0% | |
TTTGCTCGATATATGCTTCA+TGG | - | Chr6:101550990-101551009 | MsG0680035290.01.T01:CDS | 35.0% | |
AAGGAAAGCCATCTTCCTAT+TGG | - | Chr6:101551700-101551719 | MsG0680035290.01.T01:CDS | 40.0% | |
ATGGAAGATGAGACACTTGA+CGG | - | Chr6:101551402-101551421 | MsG0680035290.01.T01:CDS | 40.0% | |
CCATTATTTCCCACTCCAAT+AGG | + | Chr6:101551565-101551584 | None:intergenic | 40.0% | |
CCTATTGGAGTGGGAAATAA+TGG | - | Chr6:101551562-101551581 | MsG0680035290.01.T01:CDS | 40.0% | |
CTCTTGGAGGAAACTTGATT+TGG | - | Chr6:101551189-101551208 | MsG0680035290.01.T01:intron | 40.0% | |
GCATGACCATGATTTACTTG+CGG | + | Chr6:101550613-101550632 | None:intergenic | 40.0% | |
GTTGATCATCCTATTGGAGT+GGG | - | Chr6:101551553-101551572 | MsG0680035290.01.T01:CDS | 40.0% | |
TAACCTGAGAACTCAGAAGA+TGG | - | Chr6:101551627-101551646 | MsG0680035290.01.T01:CDS | 40.0% | |
TAGAGGCAATTTCGAGAGAA+TGG | + | Chr6:101550568-101550587 | None:intergenic | 40.0% | |
! | CGAGTGTTGTATTTGCTTTC+TGG | - | Chr6:101550759-101550778 | MsG0680035290.01.T01:CDS | 40.0% |
! | TGTATTTGCTTTCTGGTGAG+AGG | - | Chr6:101550766-101550785 | MsG0680035290.01.T01:CDS | 40.0% |
! | TTACGCTCTTTAAAAGGAGG+TGG | + | Chr6:101550819-101550838 | None:intergenic | 40.0% |
!! | CTTGATTTGGATATGCCTTG+TGG | - | Chr6:101551202-101551221 | MsG0680035290.01.T01:intron | 40.0% |
ACAGCCTAAGAAGCAACTCT+TGG | - | Chr6:101551173-101551192 | MsG0680035290.01.T01:CDS | 45.0% | |
AGCAAACTCATAACGTACCC+TGG | + | Chr6:101550976-101550995 | None:intergenic | 45.0% | |
AGCTTGGTATCAAAGGCAGT+AGG | - | Chr6:101551653-101551672 | MsG0680035290.01.T01:CDS | 45.0% | |
ATGGAGGAGCTTGGTATCAA+AGG | - | Chr6:101551646-101551665 | MsG0680035290.01.T01:CDS | 45.0% | |
CACCTCCTTGCTTAAGTCAA+AGG | + | Chr6:101551320-101551339 | None:intergenic | 45.0% | |
CGTTGATCATCCTATTGGAG+TGG | - | Chr6:101551552-101551571 | MsG0680035290.01.T01:CDS | 45.0% | |
GAAAGCCATCTTCCTATTGG+AGG | - | Chr6:101551703-101551722 | MsG0680035290.01.T01:CDS | 45.0% | |
GCAAACTCATAACGTACCCT+GGG | + | Chr6:101550975-101550994 | None:intergenic | 45.0% | |
TCCTCCAAGAGTTGCTTCTT+AGG | + | Chr6:101551180-101551199 | None:intergenic | 45.0% | |
TGGATATGCCTTGTGGTATG+AGG | - | Chr6:101551209-101551228 | MsG0680035290.01.T01:intron | 45.0% | |
! | AGGCAGTAGGCATTTTTGTC+AGG | - | Chr6:101551666-101551685 | MsG0680035290.01.T01:CDS | 45.0% |
! | CAGAAGAGATGATGACGAAC+TGG | - | Chr6:101551597-101551616 | MsG0680035290.01.T01:CDS | 45.0% |
! | GAATGGAGTGTGTCATTGGT+GGG | - | Chr6:101551258-101551277 | MsG0680035290.01.T01:CDS | 45.0% |
! | GAGATGATGACGAACTGGTT+TGG | - | Chr6:101551602-101551621 | MsG0680035290.01.T01:CDS | 45.0% |
! | GATCTAGAGTCTGTTGTAGG+AGG | + | Chr6:101550716-101550735 | None:intergenic | 45.0% |
! | GCAGATCTAGAGTCTGTTGT+AGG | + | Chr6:101550719-101550738 | None:intergenic | 45.0% |
! | GGTGTCCTTTGACTTAAGCA+AGG | - | Chr6:101551312-101551331 | MsG0680035290.01.T01:CDS | 45.0% |
! | GTCCTTTGACTTAAGCAAGG+AGG | - | Chr6:101551315-101551334 | MsG0680035290.01.T01:CDS | 45.0% |
! | TCTAACTCAGCAGGGCTTTT+AGG | + | Chr6:101550951-101550970 | None:intergenic | 45.0% |
! | TGAATGGAGTGTGTCATTGG+TGG | - | Chr6:101551257-101551276 | MsG0680035290.01.T01:CDS | 45.0% |
! | TTCATTCTTGGGCCTTTTCC+TGG | - | Chr6:101551529-101551548 | MsG0680035290.01.T01:CDS | 45.0% |
!! | AACTTGGTGTGAAGGAGTCT+TGG | - | Chr6:101551497-101551516 | MsG0680035290.01.T01:CDS | 45.0% |
!! | TTTGGGTGAACTTGGTGTGA+AGG | - | Chr6:101551489-101551508 | MsG0680035290.01.T01:CDS | 45.0% |
ACTCAGAAGATGGAGGAGCT+TGG | - | Chr6:101551637-101551656 | MsG0680035290.01.T01:CDS | 50.0% | |
CCAATAGGATGATCAACGCC+AGG | + | Chr6:101551550-101551569 | None:intergenic | 50.0% | |
CCTCCATCTTCTGAGTTCTC+AGG | + | Chr6:101551633-101551652 | None:intergenic | 50.0% | |
CCTGAGAACTCAGAAGATGG+AGG | - | Chr6:101551630-101551649 | MsG0680035290.01.T01:CDS | 50.0% | |
GCCTAAGAAGCAACTCTTGG+AGG | - | Chr6:101551176-101551195 | MsG0680035290.01.T01:CDS | 50.0% | |
GGATGATCAACGCCAGGAAA+AGG | + | Chr6:101551544-101551563 | None:intergenic | 50.0% | |
TCTGATGCTTACGAGGACGA+TGG | - | Chr6:101550681-101550700 | MsG0680035290.01.T01:CDS | 50.0% | |
!! | ACTCAGCAGGGCTTTTAGGA+AGG | + | Chr6:101550947-101550966 | None:intergenic | 50.0% |
!! | CCTGGCGTTGATCATCCTAT+TGG | - | Chr6:101551547-101551566 | MsG0680035290.01.T01:CDS | 50.0% |
CGTGTCACGTGACGATGTGT+GGG | - | Chr6:101551144-101551163 | MsG0680035290.01.T01:CDS | 55.0% | |
CCCTGCTGAGTTAGAGCCCA+GGG | - | Chr6:101550956-101550975 | MsG0680035290.01.T01:CDS | 60.0% | |
GCGTGTCACGTGACGATGTG+TGG | - | Chr6:101551143-101551162 | MsG0680035290.01.T01:CDS | 60.0% | |
! | ACCCTGGGCTCTAACTCAGC+AGG | + | Chr6:101550960-101550979 | None:intergenic | 60.0% |
! | CCCTGGGCTCTAACTCAGCA+GGG | + | Chr6:101550959-101550978 | None:intergenic | 60.0% |
GCCCTGCTGAGTTAGAGCCC+AGG | - | Chr6:101550955-101550974 | MsG0680035290.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 101550495 | 101551738 | 101550495 | ID=MsG0680035290.01;Name=MsG0680035290.01 |
Chr6 | mRNA | 101550495 | 101551738 | 101550495 | ID=MsG0680035290.01.T01;Parent=MsG0680035290.01;Name=MsG0680035290.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|2|0|395 |
Chr6 | exon | 101551256 | 101551738 | 101551256 | ID=MsG0680035290.01.T01:exon:10760;Parent=MsG0680035290.01.T01 |
Chr6 | exon | 101550495 | 101551199 | 101550495 | ID=MsG0680035290.01.T01:exon:10759;Parent=MsG0680035290.01.T01 |
Chr6 | CDS | 101551256 | 101551738 | 101551256 | ID=MsG0680035290.01.T01:cds;Parent=MsG0680035290.01.T01 |
Chr6 | CDS | 101550495 | 101551199 | 101550495 | ID=MsG0680035290.01.T01:cds;Parent=MsG0680035290.01.T01 |
Gene Sequence |
Protein sequence |