Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043681.01.T01 | AET02355.2 | 89.017 | 346 | 33 | 1 | 1 | 341 | 1 | 346 | 0 | 629 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043681.01.T01 | Q9LU24 | 30.814 | 172 | 100 | 6 | 8 | 178 | 1 | 154 | 1.17E-14 | 77.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043681.01.T01 | G7LGR5 | 89.017 | 346 | 33 | 1 | 1 | 341 | 1 | 346 | 0.0 | 629 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043681.01.T01 | MTR_8g039500 | 89.017 | 346 | 33 | 1 | 1 | 341 | 1 | 346 | 0.0 | 629 |
MsG0880043681.01.T01 | MTR_2g066170 | 77.121 | 389 | 72 | 6 | 1 | 374 | 1 | 387 | 0.0 | 588 |
MsG0880043681.01.T01 | MTR_2g066200 | 74.872 | 390 | 81 | 6 | 1 | 374 | 1 | 389 | 0.0 | 566 |
MsG0880043681.01.T01 | MTR_2g066150 | 60.052 | 383 | 122 | 10 | 1 | 374 | 1 | 361 | 3.86e-146 | 418 |
MsG0880043681.01.T01 | MTR_2g065860 | 56.784 | 398 | 139 | 10 | 1 | 374 | 1 | 389 | 3.88e-143 | 411 |
MsG0880043681.01.T01 | MTR_2g065840 | 55.164 | 397 | 146 | 11 | 1 | 373 | 1 | 389 | 8.06e-130 | 378 |
MsG0880043681.01.T01 | MTR_1g050308 | 50.773 | 388 | 115 | 10 | 1 | 374 | 23 | 348 | 5.91e-113 | 333 |
MsG0880043681.01.T01 | MTR_3g011120 | 51.733 | 375 | 162 | 9 | 1 | 362 | 1 | 369 | 1.34e-112 | 333 |
MsG0880043681.01.T01 | MTR_8g063440 | 48.092 | 393 | 176 | 11 | 1 | 374 | 1 | 384 | 7.18e-109 | 324 |
MsG0880043681.01.T01 | MTR_8g464770 | 47.781 | 383 | 179 | 9 | 1 | 369 | 1 | 376 | 6.13e-106 | 317 |
MsG0880043681.01.T01 | MTR_8g467670 | 46.438 | 379 | 177 | 11 | 11 | 374 | 13 | 380 | 5.66e-99 | 299 |
MsG0880043681.01.T01 | MTR_8g064890 | 45.750 | 400 | 180 | 14 | 1 | 374 | 1 | 389 | 6.72e-99 | 299 |
MsG0880043681.01.T01 | MTR_2g038680 | 42.651 | 415 | 186 | 12 | 1 | 372 | 5 | 410 | 7.53e-97 | 294 |
MsG0880043681.01.T01 | MTR_8g012090 | 45.856 | 362 | 143 | 9 | 1 | 341 | 5 | 334 | 1.40e-95 | 288 |
MsG0880043681.01.T01 | MTR_0129s0070 | 44.557 | 395 | 185 | 12 | 6 | 374 | 11 | 397 | 7.85e-95 | 289 |
MsG0880043681.01.T01 | MTR_0129s0120 | 44.836 | 397 | 181 | 13 | 4 | 372 | 9 | 395 | 7.94e-95 | 289 |
MsG0880043681.01.T01 | MTR_5g024260 | 47.938 | 388 | 162 | 14 | 1 | 354 | 7 | 388 | 1.97e-94 | 288 |
MsG0880043681.01.T01 | MTR_0831s0010 | 43.921 | 403 | 176 | 16 | 2 | 373 | 38 | 421 | 1.69e-92 | 283 |
MsG0880043681.01.T01 | MTR_0129s0050 | 43.029 | 416 | 176 | 14 | 4 | 372 | 6 | 407 | 2.47e-92 | 283 |
MsG0880043681.01.T01 | MTR_1g050312 | 55.674 | 282 | 93 | 8 | 76 | 349 | 15 | 272 | 1.03e-91 | 277 |
MsG0880043681.01.T01 | MTR_5g097330 | 41.422 | 408 | 193 | 13 | 1 | 372 | 5 | 402 | 2.32e-91 | 280 |
MsG0880043681.01.T01 | MTR_2g021950 | 42.607 | 399 | 189 | 12 | 1 | 369 | 5 | 393 | 1.01e-90 | 278 |
MsG0880043681.01.T01 | MTR_2g022000 | 43.544 | 395 | 172 | 13 | 2 | 350 | 6 | 395 | 2.76e-90 | 278 |
MsG0880043681.01.T01 | MTR_4g102410 | 42.469 | 405 | 193 | 13 | 1 | 371 | 50 | 448 | 7.96e-90 | 278 |
MsG0880043681.01.T01 | MTR_2g034700 | 45.974 | 385 | 168 | 13 | 3 | 366 | 4 | 369 | 1.13e-88 | 272 |
MsG0880043681.01.T01 | MTR_2g021800 | 41.905 | 420 | 189 | 14 | 2 | 374 | 6 | 417 | 9.14e-88 | 271 |
MsG0880043681.01.T01 | MTR_4g014370 | 42.823 | 418 | 183 | 18 | 1 | 372 | 1 | 408 | 4.10e-87 | 269 |
MsG0880043681.01.T01 | MTR_0054s0090 | 42.092 | 411 | 190 | 12 | 2 | 374 | 7 | 407 | 3.21e-86 | 267 |
MsG0880043681.01.T01 | MTR_0054s0100 | 41.707 | 410 | 195 | 11 | 2 | 374 | 7 | 409 | 4.09e-86 | 267 |
MsG0880043681.01.T01 | MTR_4g117550 | 41.944 | 391 | 182 | 11 | 4 | 374 | 9 | 374 | 5.83e-86 | 265 |
MsG0880043681.01.T01 | MTR_1g007450 | 42.971 | 377 | 183 | 9 | 1 | 349 | 1 | 373 | 1.12e-85 | 266 |
MsG0880043681.01.T01 | MTR_7g017170 | 39.903 | 411 | 203 | 13 | 1 | 374 | 7 | 410 | 4.33e-85 | 264 |
MsG0880043681.01.T01 | MTR_7g017130 | 40.750 | 400 | 203 | 13 | 1 | 374 | 7 | 398 | 1.87e-84 | 262 |
MsG0880043681.01.T01 | MTR_5g059430 | 41.106 | 416 | 184 | 16 | 6 | 371 | 20 | 424 | 2.41e-84 | 263 |
MsG0880043681.01.T01 | MTR_5g096910 | 41.266 | 395 | 199 | 13 | 2 | 372 | 7 | 392 | 3.42e-84 | 261 |
MsG0880043681.01.T01 | MTR_6g079770 | 42.029 | 414 | 187 | 13 | 4 | 371 | 9 | 415 | 1.05e-83 | 261 |
MsG0880043681.01.T01 | MTR_6g086825 | 41.935 | 403 | 189 | 14 | 9 | 374 | 67 | 461 | 7.89e-83 | 260 |
MsG0880043681.01.T01 | MTR_6g080680 | 42.065 | 397 | 183 | 15 | 2 | 367 | 9 | 389 | 1.12e-82 | 258 |
MsG0880043681.01.T01 | MTR_5g069390 | 40.648 | 401 | 198 | 11 | 6 | 371 | 20 | 415 | 2.99e-82 | 259 |
MsG0880043681.01.T01 | MTR_4g055820 | 43.526 | 363 | 160 | 10 | 2 | 327 | 4 | 358 | 3.04e-82 | 255 |
MsG0880043681.01.T01 | MTR_4g028660 | 41.103 | 399 | 200 | 14 | 1 | 370 | 4 | 396 | 5.56e-82 | 256 |
MsG0880043681.01.T01 | MTR_4g027450 | 41.103 | 399 | 200 | 14 | 1 | 370 | 4 | 396 | 5.56e-82 | 256 |
MsG0880043681.01.T01 | MTR_8g063330 | 44.475 | 362 | 152 | 16 | 1 | 327 | 1 | 348 | 8.86e-82 | 258 |
MsG0880043681.01.T01 | MTR_4g028680 | 41.422 | 408 | 195 | 15 | 1 | 374 | 4 | 401 | 1.22e-81 | 255 |
MsG0880043681.01.T01 | MTR_4g028510 | 43.032 | 409 | 187 | 16 | 1 | 373 | 4 | 402 | 1.85e-81 | 256 |
MsG0880043681.01.T01 | MTR_2g021770 | 40.191 | 418 | 196 | 13 | 1 | 374 | 1 | 408 | 2.15e-81 | 254 |
MsG0880043681.01.T01 | MTR_8g064790 | 42.051 | 390 | 158 | 11 | 1 | 374 | 1 | 338 | 5.27e-81 | 251 |
MsG0880043681.01.T01 | MTR_2g104340 | 39.558 | 407 | 195 | 13 | 4 | 374 | 6 | 397 | 1.53e-80 | 252 |
MsG0880043681.01.T01 | MTR_5g096630 | 40.244 | 410 | 204 | 12 | 1 | 372 | 7 | 413 | 3.18e-80 | 252 |
MsG0880043681.01.T01 | MTR_5g097350 | 40.464 | 388 | 199 | 10 | 3 | 369 | 7 | 383 | 3.25e-80 | 251 |
MsG0880043681.01.T01 | MTR_7g069550 | 40.452 | 398 | 185 | 15 | 6 | 365 | 8 | 391 | 8.01e-80 | 250 |
MsG0880043681.01.T01 | MTR_8g033140 | 38.837 | 430 | 190 | 12 | 2 | 374 | 6 | 419 | 1.21e-79 | 250 |
MsG0880043681.01.T01 | MTR_1g053510 | 42.543 | 409 | 182 | 14 | 2 | 368 | 4 | 401 | 1.80e-79 | 249 |
MsG0880043681.01.T01 | MTR_4g028750 | 41.207 | 381 | 173 | 14 | 1 | 344 | 4 | 370 | 2.50e-78 | 246 |
MsG0880043681.01.T01 | MTR_6g079810 | 41.707 | 410 | 188 | 15 | 4 | 371 | 61 | 461 | 8.19e-78 | 247 |
MsG0880043681.01.T01 | MTR_7g017040 | 39.547 | 397 | 205 | 11 | 5 | 373 | 9 | 398 | 1.45e-77 | 244 |
MsG0880043681.01.T01 | MTR_0134s0060 | 38.242 | 421 | 205 | 13 | 1 | 374 | 1 | 413 | 3.45e-77 | 244 |
MsG0880043681.01.T01 | MTR_1g098180 | 40.100 | 399 | 168 | 15 | 1 | 367 | 1 | 360 | 4.66e-77 | 242 |
MsG0880043681.01.T01 | MTR_8g041270 | 39.192 | 421 | 195 | 15 | 1 | 374 | 1 | 407 | 5.92e-77 | 243 |
MsG0880043681.01.T01 | MTR_5g037680 | 40.842 | 404 | 170 | 19 | 7 | 367 | 3 | 380 | 1.27e-76 | 244 |
MsG0880043681.01.T01 | MTR_8g036970 | 43.590 | 351 | 138 | 9 | 16 | 353 | 2 | 305 | 1.34e-76 | 241 |
MsG0880043681.01.T01 | MTR_8g046310 | 41.837 | 392 | 182 | 17 | 2 | 368 | 3 | 373 | 1.96e-76 | 241 |
MsG0880043681.01.T01 | MTR_8g032980 | 39.767 | 430 | 191 | 16 | 2 | 374 | 4 | 422 | 4.42e-75 | 239 |
MsG0880043681.01.T01 | MTR_6g461660 | 40.967 | 393 | 198 | 12 | 4 | 369 | 11 | 396 | 6.04e-75 | 238 |
MsG0880043681.01.T01 | MTR_5g097220 | 41.032 | 407 | 192 | 14 | 7 | 372 | 8 | 407 | 6.08e-75 | 238 |
MsG0880043681.01.T01 | MTR_1g007410 | 40.704 | 398 | 193 | 13 | 1 | 365 | 11 | 398 | 6.95e-75 | 238 |
MsG0880043681.01.T01 | MTR_6g090180 | 39.461 | 408 | 199 | 13 | 2 | 370 | 37 | 435 | 2.49e-74 | 237 |
MsG0880043681.01.T01 | MTR_4g007940 | 44.476 | 353 | 142 | 17 | 62 | 374 | 4 | 342 | 5.22e-74 | 233 |
MsG0880043681.01.T01 | MTR_5g043605 | 40.323 | 372 | 153 | 11 | 8 | 368 | 21 | 334 | 7.71e-73 | 231 |
MsG0880043681.01.T01 | MTR_8g046200 | 40.909 | 418 | 176 | 15 | 10 | 369 | 14 | 418 | 1.14e-72 | 233 |
MsG0880043681.01.T01 | MTR_4g130330 | 39.747 | 395 | 201 | 13 | 9 | 373 | 4 | 391 | 1.30e-72 | 231 |
MsG0880043681.01.T01 | MTR_7g111700 | 38.806 | 402 | 163 | 15 | 9 | 374 | 12 | 366 | 9.99e-71 | 226 |
MsG0880043681.01.T01 | MTR_7g079640 | 38.997 | 359 | 182 | 11 | 11 | 349 | 12 | 353 | 2.33e-69 | 223 |
MsG0880043681.01.T01 | MTR_2g104280 | 38.049 | 410 | 196 | 15 | 7 | 372 | 9 | 404 | 3.61e-68 | 220 |
MsG0880043681.01.T01 | MTR_8g013000 | 39.665 | 358 | 173 | 12 | 6 | 329 | 4 | 352 | 8.80e-68 | 219 |
MsG0880043681.01.T01 | MTR_5g072060 | 39.286 | 392 | 167 | 15 | 10 | 359 | 4 | 366 | 9.15e-68 | 225 |
MsG0880043681.01.T01 | MTR_8g046220 | 38.534 | 423 | 182 | 14 | 2 | 369 | 3 | 402 | 9.65e-68 | 219 |
MsG0880043681.01.T01 | MTR_5g097680 | 37.028 | 424 | 204 | 16 | 5 | 372 | 10 | 426 | 6.86e-67 | 218 |
MsG0880043681.01.T01 | MTR_6g478230 | 38.424 | 406 | 189 | 15 | 9 | 374 | 24 | 408 | 1.24e-66 | 217 |
MsG0880043681.01.T01 | MTR_8g063370 | 39.459 | 370 | 201 | 12 | 10 | 364 | 22 | 383 | 1.40e-66 | 216 |
MsG0880043681.01.T01 | MTR_8g063310 | 34.949 | 392 | 207 | 15 | 4 | 364 | 14 | 388 | 5.20e-65 | 212 |
MsG0880043681.01.T01 | MTR_1g007430 | 42.308 | 338 | 143 | 12 | 23 | 329 | 7 | 323 | 1.98e-63 | 206 |
MsG0880043681.01.T01 | MTR_2g064950 | 37.374 | 396 | 192 | 17 | 6 | 364 | 4 | 380 | 2.11e-63 | 207 |
MsG0880043681.01.T01 | MTR_5g092850 | 37.065 | 402 | 194 | 16 | 11 | 370 | 15 | 399 | 3.06e-61 | 202 |
MsG0880043681.01.T01 | MTR_8g018110 | 34.390 | 410 | 217 | 11 | 1 | 372 | 1 | 396 | 6.69e-61 | 201 |
MsG0880043681.01.T01 | MTR_5g091140 | 36.528 | 386 | 194 | 12 | 1 | 356 | 37 | 401 | 6.94e-61 | 202 |
MsG0880043681.01.T01 | MTR_6g090250 | 36.869 | 396 | 188 | 15 | 32 | 370 | 31 | 421 | 7.71e-61 | 202 |
MsG0880043681.01.T01 | MTR_4g014370 | 38.560 | 389 | 158 | 15 | 1 | 372 | 12 | 336 | 1.33e-60 | 199 |
MsG0880043681.01.T01 | MTR_8g033110 | 35.129 | 427 | 209 | 16 | 1 | 372 | 1 | 414 | 9.36e-60 | 199 |
MsG0880043681.01.T01 | MTR_8g033090 | 34.906 | 424 | 211 | 15 | 1 | 372 | 1 | 411 | 1.21e-58 | 196 |
MsG0880043681.01.T01 | MTR_7g016930 | 38.700 | 323 | 147 | 10 | 5 | 303 | 9 | 304 | 1.62e-58 | 193 |
MsG0880043681.01.T01 | MTR_5g074800 | 37.644 | 348 | 172 | 15 | 51 | 365 | 1 | 336 | 7.68e-58 | 192 |
MsG0880043681.01.T01 | MTR_6g078010 | 38.968 | 349 | 165 | 14 | 49 | 368 | 1 | 330 | 1.43e-56 | 189 |
MsG0880043681.01.T01 | MTR_5g068490 | 43.197 | 294 | 139 | 11 | 86 | 374 | 8 | 278 | 1.34e-55 | 184 |
MsG0880043681.01.T01 | MTR_5g092860 | 37.921 | 356 | 160 | 14 | 31 | 350 | 21 | 351 | 9.30e-55 | 184 |
MsG0880043681.01.T01 | MTR_5g096900 | 39.634 | 328 | 140 | 16 | 1 | 289 | 1 | 309 | 2.73e-53 | 179 |
MsG0880043681.01.T01 | MTR_8g063350 | 33.773 | 379 | 189 | 12 | 3 | 365 | 5 | 337 | 6.10e-53 | 179 |
MsG0880043681.01.T01 | MTR_5g022850 | 34.250 | 400 | 187 | 13 | 1 | 374 | 5 | 354 | 9.20e-52 | 176 |
MsG0880043681.01.T01 | MTR_5g074850 | 36.111 | 396 | 192 | 18 | 2 | 352 | 25 | 404 | 6.34e-51 | 183 |
MsG0880043681.01.T01 | MTR_8g033000 | 35.829 | 374 | 180 | 15 | 49 | 373 | 1 | 363 | 2.42e-50 | 172 |
MsG0880043681.01.T01 | MTR_7g104710 | 38.487 | 304 | 134 | 10 | 4 | 286 | 9 | 280 | 1.43e-49 | 169 |
MsG0880043681.01.T01 | MTR_2g021920 | 41.772 | 237 | 110 | 7 | 157 | 369 | 37 | 269 | 1.61e-49 | 168 |
MsG0880043681.01.T01 | MTR_5g097820 | 38.403 | 263 | 133 | 9 | 5 | 245 | 14 | 269 | 5.05e-48 | 164 |
MsG0880043681.01.T01 | MTR_7g023800 | 35.277 | 343 | 156 | 11 | 51 | 366 | 1 | 304 | 2.02e-47 | 164 |
MsG0880043681.01.T01 | MTR_1g076810 | 42.437 | 238 | 113 | 9 | 4 | 223 | 10 | 241 | 1.44e-46 | 169 |
MsG0880043681.01.T01 | MTR_5g075370 | 35.840 | 399 | 187 | 21 | 3 | 352 | 2 | 380 | 1.55e-46 | 169 |
MsG0880043681.01.T01 | MTR_5g086590 | 43.933 | 239 | 109 | 11 | 127 | 354 | 14 | 238 | 1.11e-45 | 157 |
MsG0880043681.01.T01 | MTR_5g023970 | 44.737 | 190 | 100 | 3 | 189 | 374 | 9 | 197 | 2.71e-44 | 152 |
MsG0880043681.01.T01 | MTR_6g004450 | 40.343 | 233 | 121 | 7 | 151 | 372 | 43 | 268 | 1.19e-42 | 150 |
MsG0880043681.01.T01 | MTR_5g094350 | 36.806 | 288 | 123 | 10 | 8 | 259 | 9 | 273 | 2.14e-42 | 149 |
MsG0880043681.01.T01 | MTR_6g087620 | 34.740 | 308 | 151 | 9 | 77 | 363 | 1 | 279 | 2.24e-42 | 149 |
MsG0880043681.01.T01 | MTR_6g070880 | 40.756 | 238 | 109 | 9 | 1 | 208 | 21 | 256 | 2.42e-42 | 149 |
MsG0880043681.01.T01 | MTR_6g071420 | 40.756 | 238 | 109 | 9 | 1 | 208 | 21 | 256 | 2.42e-42 | 149 |
MsG0880043681.01.T01 | MTR_5g064700 | 33.923 | 339 | 175 | 15 | 77 | 372 | 35 | 367 | 5.15e-42 | 151 |
MsG0880043681.01.T01 | MTR_5g037190 | 35.769 | 260 | 140 | 7 | 1 | 247 | 5 | 250 | 5.32e-42 | 147 |
MsG0880043681.01.T01 | MTR_8g073570 | 47.399 | 173 | 79 | 5 | 4 | 168 | 2 | 170 | 1.67e-41 | 144 |
MsG0880043681.01.T01 | MTR_6g079790 | 33.544 | 316 | 173 | 10 | 89 | 374 | 2 | 310 | 1.93e-40 | 145 |
MsG0880043681.01.T01 | MTR_4g016000 | 45.370 | 216 | 67 | 12 | 131 | 322 | 2 | 190 | 2.96e-40 | 142 |
MsG0880043681.01.T01 | MTR_6g465360 | 40.000 | 195 | 97 | 4 | 1 | 176 | 51 | 244 | 8.15e-40 | 143 |
MsG0880043681.01.T01 | MTR_5g076490 | 34.699 | 366 | 168 | 14 | 49 | 373 | 1 | 336 | 1.33e-39 | 144 |
MsG0880043681.01.T01 | MTR_3g018750 | 40.164 | 244 | 114 | 10 | 156 | 372 | 2 | 240 | 1.29e-38 | 138 |
MsG0880043681.01.T01 | MTR_6g090260 | 43.299 | 194 | 95 | 6 | 188 | 370 | 72 | 261 | 4.41e-38 | 137 |
MsG0880043681.01.T01 | MTR_6g090260 | 51.613 | 62 | 29 | 1 | 1 | 61 | 8 | 69 | 8.46e-12 | 65.5 |
MsG0880043681.01.T01 | MTR_5g097850 | 35.616 | 292 | 117 | 11 | 98 | 372 | 7 | 244 | 4.83e-38 | 137 |
MsG0880043681.01.T01 | MTR_6g009350 | 42.424 | 198 | 97 | 7 | 151 | 335 | 2 | 195 | 5.34e-37 | 132 |
MsG0880043681.01.T01 | MTR_1g115205 | 36.032 | 247 | 102 | 9 | 4 | 229 | 25 | 236 | 1.21e-35 | 131 |
MsG0880043681.01.T01 | MTR_2g104260 | 34.050 | 279 | 144 | 9 | 6 | 253 | 8 | 277 | 1.62e-35 | 131 |
MsG0880043681.01.T01 | MTR_3g047580 | 46.528 | 144 | 56 | 3 | 1 | 140 | 1 | 127 | 1.88e-35 | 126 |
MsG0880043681.01.T01 | MTR_7g019250 | 43.868 | 212 | 82 | 9 | 155 | 349 | 222 | 413 | 2.71e-35 | 135 |
MsG0880043681.01.T01 | MTR_3g019290 | 38.498 | 213 | 80 | 10 | 1 | 197 | 1 | 178 | 2.79e-31 | 117 |
MsG0880043681.01.T01 | MTR_5g098950 | 40.465 | 215 | 84 | 8 | 128 | 329 | 90 | 273 | 3.29e-31 | 120 |
MsG0880043681.01.T01 | MTR_1g047080 | 30.746 | 335 | 172 | 12 | 49 | 374 | 1 | 284 | 1.66e-28 | 113 |
MsG0880043681.01.T01 | MTR_5g096070 | 41.104 | 163 | 70 | 4 | 6 | 165 | 20 | 159 | 2.09e-27 | 106 |
MsG0880043681.01.T01 | MTR_5g097650 | 40.602 | 133 | 75 | 2 | 9 | 141 | 19 | 147 | 5.03e-26 | 102 |
MsG0880043681.01.T01 | MTR_1g097560 | 27.446 | 368 | 224 | 14 | 9 | 358 | 33 | 375 | 1.61e-24 | 103 |
MsG0880043681.01.T01 | MTR_3g030620 | 38.650 | 163 | 86 | 5 | 220 | 371 | 21 | 180 | 1.99e-24 | 99.0 |
MsG0880043681.01.T01 | MTR_7g017150 | 38.743 | 191 | 106 | 6 | 191 | 374 | 82 | 268 | 3.36e-24 | 100 |
MsG0880043681.01.T01 | MTR_7g101200 | 37.321 | 209 | 104 | 8 | 128 | 329 | 40 | 228 | 3.57e-24 | 99.8 |
MsG0880043681.01.T01 | MTR_7g017120 | 38.743 | 191 | 106 | 6 | 191 | 374 | 81 | 267 | 4.02e-24 | 100 |
MsG0880043681.01.T01 | MTR_1g050305 | 65.060 | 83 | 22 | 2 | 275 | 350 | 21 | 103 | 6.17e-23 | 94.0 |
MsG0880043681.01.T01 | MTR_8g035690 | 34.146 | 287 | 129 | 14 | 132 | 372 | 30 | 302 | 1.20e-22 | 97.1 |
MsG0880043681.01.T01 | MTR_5g097540 | 40.972 | 144 | 72 | 6 | 191 | 329 | 97 | 232 | 4.04e-22 | 95.5 |
MsG0880043681.01.T01 | MTR_6g079730 | 44.056 | 143 | 64 | 7 | 236 | 368 | 9 | 145 | 1.24e-21 | 90.5 |
MsG0880043681.01.T01 | MTR_2g021155 | 26.061 | 330 | 230 | 9 | 15 | 344 | 39 | 354 | 3.52e-21 | 95.9 |
MsG0880043681.01.T01 | MTR_5g096920 | 36.538 | 156 | 87 | 6 | 222 | 371 | 1 | 150 | 8.98e-21 | 88.2 |
MsG0880043681.01.T01 | MTR_1g068835 | 27.139 | 339 | 213 | 14 | 12 | 339 | 4 | 319 | 1.83e-20 | 92.0 |
MsG0880043681.01.T01 | MTR_5g066420 | 39.310 | 145 | 65 | 6 | 222 | 350 | 1 | 138 | 2.22e-20 | 87.0 |
MsG0880043681.01.T01 | MTR_2g028160 | 26.911 | 327 | 198 | 12 | 8 | 305 | 1 | 315 | 2.56e-20 | 92.0 |
MsG0880043681.01.T01 | MTR_4g055060 | 28.247 | 308 | 201 | 10 | 12 | 311 | 30 | 325 | 2.65e-20 | 91.7 |
MsG0880043681.01.T01 | MTR_5g091150 | 36.898 | 187 | 83 | 8 | 107 | 290 | 40 | 194 | 5.31e-20 | 87.4 |
MsG0880043681.01.T01 | MTR_3g036290 | 28.182 | 330 | 197 | 14 | 12 | 334 | 22 | 318 | 5.50e-20 | 90.5 |
MsG0880043681.01.T01 | MTR_2g031720 | 28.205 | 312 | 190 | 13 | 12 | 307 | 6 | 299 | 5.85e-20 | 90.9 |
MsG0880043681.01.T01 | MTR_3g014540 | 25.882 | 340 | 227 | 11 | 12 | 344 | 29 | 350 | 6.60e-20 | 90.5 |
MsG0880043681.01.T01 | MTR_4g133170 | 27.586 | 348 | 201 | 16 | 12 | 336 | 4 | 323 | 1.48e-19 | 89.7 |
MsG0880043681.01.T01 | MTR_5g057710 | 26.452 | 310 | 195 | 11 | 12 | 310 | 46 | 333 | 4.97e-19 | 88.2 |
MsG0880043681.01.T01 | MTR_0667s0010 | 25.478 | 314 | 205 | 10 | 9 | 305 | 3 | 304 | 6.71e-19 | 87.8 |
MsG0880043681.01.T01 | MTR_3g006670 | 28.869 | 336 | 203 | 14 | 12 | 334 | 49 | 361 | 7.80e-19 | 87.8 |
MsG0880043681.01.T01 | MTR_2g426060 | 27.523 | 327 | 192 | 14 | 9 | 307 | 3 | 312 | 1.18e-18 | 87.0 |
MsG0880043681.01.T01 | MTR_2g028130 | 26.765 | 340 | 215 | 13 | 8 | 323 | 1 | 330 | 1.46e-18 | 87.0 |
MsG0880043681.01.T01 | MTR_2g046900 | 27.577 | 359 | 210 | 15 | 12 | 338 | 28 | 368 | 1.70e-18 | 86.7 |
MsG0880043681.01.T01 | MTR_1g097490 | 28.065 | 310 | 196 | 10 | 2 | 305 | 39 | 327 | 1.75e-18 | 86.7 |
MsG0880043681.01.T01 | MTR_2g425980 | 28.701 | 331 | 186 | 16 | 8 | 307 | 1 | 312 | 2.44e-18 | 86.3 |
MsG0880043681.01.T01 | MTR_2g022020 | 42.718 | 103 | 54 | 2 | 269 | 369 | 17 | 116 | 2.94e-18 | 80.1 |
MsG0880043681.01.T01 | MTR_1g094210 | 27.483 | 302 | 183 | 13 | 12 | 305 | 57 | 330 | 3.29e-18 | 85.9 |
MsG0880043681.01.T01 | MTR_2g426070 | 25.676 | 370 | 219 | 14 | 13 | 345 | 7 | 357 | 3.94e-18 | 85.5 |
MsG0880043681.01.T01 | MTR_1g094210 | 27.483 | 302 | 183 | 13 | 12 | 305 | 57 | 330 | 4.75e-18 | 85.5 |
MsG0880043681.01.T01 | MTR_8g041440 | 45.055 | 91 | 39 | 1 | 4 | 94 | 7 | 86 | 5.75e-18 | 79.3 |
MsG0880043681.01.T01 | MTR_2g426020 | 26.875 | 320 | 198 | 13 | 9 | 307 | 3 | 307 | 6.38e-18 | 85.1 |
MsG0880043681.01.T01 | MTR_5g097660 | 46.296 | 108 | 48 | 5 | 269 | 370 | 14 | 117 | 7.24e-18 | 79.3 |
MsG0880043681.01.T01 | MTR_3g014570 | 25.459 | 381 | 225 | 14 | 12 | 360 | 29 | 382 | 7.89e-18 | 84.3 |
MsG0880043681.01.T01 | MTR_7g070440 | 26.462 | 325 | 186 | 13 | 12 | 308 | 7 | 306 | 8.18e-18 | 84.3 |
MsG0880043681.01.T01 | MTR_4g021785 | 24.731 | 372 | 240 | 12 | 11 | 371 | 8 | 350 | 8.41e-18 | 84.0 |
MsG0880043681.01.T01 | MTR_5g036250 | 54.878 | 82 | 33 | 2 | 284 | 365 | 26 | 103 | 1.26e-17 | 80.5 |
MsG0880043681.01.T01 | MTR_2g025420 | 27.744 | 328 | 190 | 13 | 12 | 305 | 6 | 320 | 1.84e-17 | 83.6 |
MsG0880043681.01.T01 | MTR_3g013770 | 25.797 | 345 | 223 | 10 | 5 | 334 | 22 | 348 | 4.40e-17 | 82.4 |
MsG0880043681.01.T01 | MTR_2g029990 | 25.081 | 307 | 214 | 9 | 13 | 315 | 52 | 346 | 4.50e-17 | 82.4 |
MsG0880043681.01.T01 | MTR_3g006570 | 24.595 | 309 | 202 | 11 | 12 | 310 | 21 | 308 | 9.41e-17 | 81.3 |
MsG0880043681.01.T01 | MTR_0044s0300 | 26.727 | 333 | 207 | 13 | 12 | 334 | 38 | 343 | 1.04e-16 | 81.3 |
MsG0880043681.01.T01 | MTR_2g028110 | 27.401 | 354 | 217 | 14 | 12 | 345 | 4 | 337 | 1.10e-16 | 81.3 |
MsG0880043681.01.T01 | MTR_3g009310 | 25.076 | 327 | 223 | 11 | 12 | 334 | 42 | 350 | 1.11e-16 | 81.3 |
MsG0880043681.01.T01 | MTR_3g083010 | 26.888 | 331 | 192 | 13 | 12 | 307 | 6 | 321 | 1.41e-16 | 80.9 |
MsG0880043681.01.T01 | MTR_5g057790 | 26.518 | 313 | 191 | 13 | 12 | 310 | 46 | 333 | 1.89e-16 | 80.5 |
MsG0880043681.01.T01 | MTR_4g023120 | 24.579 | 297 | 205 | 8 | 12 | 303 | 3 | 285 | 2.63e-16 | 79.7 |
MsG0880043681.01.T01 | MTR_1g050542 | 27.011 | 348 | 216 | 13 | 12 | 345 | 58 | 381 | 2.79e-16 | 80.1 |
MsG0880043681.01.T01 | MTR_3g036335 | 24.026 | 308 | 206 | 10 | 12 | 310 | 41 | 329 | 3.13e-16 | 79.7 |
MsG0880043681.01.T01 | MTR_4g023070 | 25.081 | 307 | 210 | 9 | 12 | 313 | 3 | 294 | 6.69e-16 | 78.6 |
MsG0880043681.01.T01 | MTR_0115s0020 | 25.959 | 339 | 203 | 16 | 11 | 315 | 9 | 333 | 6.91e-16 | 79.0 |
MsG0880043681.01.T01 | MTR_2g031640 | 26.979 | 341 | 193 | 16 | 12 | 323 | 6 | 319 | 1.43e-15 | 77.8 |
MsG0880043681.01.T01 | MTR_5g022420 | 26.756 | 299 | 191 | 12 | 12 | 307 | 27 | 300 | 1.50e-15 | 77.8 |
MsG0880043681.01.T01 | MTR_2g021150 | 27.451 | 306 | 197 | 11 | 12 | 307 | 14 | 304 | 1.85e-15 | 77.4 |
MsG0880043681.01.T01 | MTR_3g023930 | 23.724 | 333 | 216 | 11 | 12 | 342 | 34 | 330 | 2.05e-15 | 77.4 |
MsG0880043681.01.T01 | MTR_4g061340 | 27.358 | 318 | 201 | 13 | 12 | 317 | 26 | 325 | 2.40e-15 | 77.0 |
MsG0880043681.01.T01 | MTR_5g057690 | 25.166 | 302 | 199 | 8 | 12 | 310 | 46 | 323 | 3.40e-15 | 76.6 |
MsG0880043681.01.T01 | MTR_2g046830 | 27.070 | 314 | 198 | 13 | 2 | 304 | 12 | 305 | 3.74e-15 | 76.6 |
MsG0880043681.01.T01 | MTR_6g048120 | 24.932 | 365 | 219 | 15 | 12 | 345 | 36 | 376 | 4.40e-15 | 76.6 |
MsG0880043681.01.T01 | MTR_3g013740 | 26.462 | 325 | 194 | 13 | 7 | 307 | 39 | 342 | 5.55e-15 | 76.3 |
MsG0880043681.01.T01 | MTR_4g023080 | 24.211 | 380 | 241 | 14 | 6 | 371 | 3 | 349 | 5.80e-15 | 75.9 |
MsG0880043681.01.T01 | MTR_4g023190 | 25.000 | 380 | 242 | 13 | 6 | 371 | 4 | 354 | 1.08e-14 | 75.1 |
MsG0880043681.01.T01 | MTR_4g116330 | 26.453 | 344 | 219 | 14 | 6 | 337 | 17 | 338 | 1.40e-14 | 74.7 |
MsG0880043681.01.T01 | MTR_1g054575 | 26.349 | 315 | 194 | 13 | 1 | 304 | 41 | 328 | 1.60e-14 | 75.5 |
MsG0880043681.01.T01 | MTR_1g097330 | 28.846 | 312 | 172 | 16 | 12 | 305 | 16 | 295 | 1.72e-14 | 74.7 |
MsG0880043681.01.T01 | MTR_3g436150 | 27.302 | 315 | 197 | 12 | 12 | 308 | 32 | 332 | 3.39e-14 | 73.9 |
MsG0880043681.01.T01 | MTR_3g030250 | 24.620 | 329 | 209 | 13 | 12 | 334 | 37 | 332 | 3.46e-14 | 73.6 |
MsG0880043681.01.T01 | MTR_3g007410 | 27.036 | 307 | 189 | 15 | 15 | 308 | 55 | 339 | 3.64e-14 | 73.6 |
MsG0880043681.01.T01 | MTR_2g024100 | 25.938 | 320 | 196 | 13 | 26 | 318 | 21 | 326 | 3.78e-14 | 73.6 |
MsG0880043681.01.T01 | MTR_5g057020 | 24.252 | 301 | 198 | 8 | 12 | 310 | 46 | 318 | 4.18e-14 | 73.2 |
MsG0880043681.01.T01 | MTR_2g055970 | 27.937 | 315 | 189 | 15 | 4 | 304 | 203 | 493 | 7.35e-14 | 73.2 |
MsG0880043681.01.T01 | MTR_7g028660 | 24.282 | 383 | 231 | 15 | 12 | 358 | 11 | 370 | 1.16e-13 | 72.0 |
MsG0880043681.01.T01 | MTR_4g023090 | 26.036 | 338 | 214 | 13 | 6 | 328 | 10 | 326 | 1.27e-13 | 72.0 |
MsG0880043681.01.T01 | MTR_3g007270 | 26.879 | 346 | 221 | 14 | 12 | 342 | 47 | 375 | 1.64e-13 | 71.6 |
MsG0880043681.01.T01 | MTR_3g009260 | 23.939 | 330 | 210 | 14 | 15 | 334 | 44 | 342 | 2.08e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_3g007330 | 25.080 | 311 | 205 | 11 | 12 | 316 | 48 | 336 | 2.09e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_3g010870 | 25.948 | 343 | 210 | 17 | 12 | 342 | 37 | 347 | 2.26e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_3g047540 | 44.318 | 88 | 42 | 4 | 187 | 273 | 2 | 83 | 2.30e-13 | 65.9 |
MsG0880043681.01.T01 | MTR_0064s0160 | 25.281 | 356 | 220 | 15 | 11 | 333 | 41 | 383 | 2.56e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_3g036430 | 23.899 | 318 | 192 | 12 | 1 | 310 | 1 | 276 | 2.85e-13 | 70.5 |
MsG0880043681.01.T01 | MTR_4g030830 | 23.620 | 326 | 201 | 11 | 12 | 307 | 9 | 316 | 3.89e-13 | 70.5 |
MsG0880043681.01.T01 | MTR_3g011100 | 26.045 | 311 | 201 | 13 | 12 | 310 | 235 | 528 | 4.01e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_6g053260 | 27.673 | 318 | 200 | 15 | 2 | 307 | 325 | 624 | 4.19e-13 | 71.2 |
MsG0880043681.01.T01 | MTR_3g030330 | 24.847 | 326 | 208 | 13 | 1 | 313 | 1 | 302 | 5.59e-13 | 70.1 |
MsG0880043681.01.T01 | MTR_5g070080 | 27.500 | 320 | 188 | 15 | 11 | 303 | 9 | 311 | 6.47e-13 | 69.7 |
MsG0880043681.01.T01 | MTR_5g086780 | 63.265 | 49 | 18 | 0 | 4 | 52 | 8 | 56 | 6.52e-13 | 68.2 |
MsG0880043681.01.T01 | MTR_5g086780 | 42.529 | 87 | 44 | 2 | 266 | 348 | 144 | 228 | 1.38e-11 | 64.3 |
MsG0880043681.01.T01 | MTR_2g078850 | 24.923 | 325 | 174 | 13 | 15 | 310 | 33 | 316 | 1.19e-12 | 68.9 |
MsG0880043681.01.T01 | MTR_8g099460 | 25.397 | 315 | 194 | 13 | 12 | 305 | 5 | 299 | 1.33e-12 | 68.9 |
MsG0880043681.01.T01 | MTR_3g011060 | 25.625 | 320 | 197 | 11 | 12 | 310 | 28 | 327 | 1.69e-12 | 68.6 |
MsG0880043681.01.T01 | MTR_3g058440 | 28.000 | 250 | 152 | 12 | 12 | 249 | 35 | 268 | 2.12e-12 | 67.8 |
MsG0880043681.01.T01 | MTR_5g070130 | 27.160 | 324 | 187 | 15 | 4 | 303 | 3 | 301 | 2.33e-12 | 68.2 |
MsG0880043681.01.T01 | MTR_2g078900 | 23.256 | 301 | 206 | 9 | 12 | 307 | 33 | 313 | 2.75e-12 | 67.8 |
MsG0880043681.01.T01 | MTR_3g030350 | 22.892 | 332 | 215 | 13 | 12 | 331 | 35 | 337 | 2.81e-12 | 67.8 |
MsG0880043681.01.T01 | MTR_4g030090 | 24.047 | 341 | 211 | 12 | 6 | 317 | 8 | 329 | 2.94e-12 | 67.8 |
MsG0880043681.01.T01 | MTR_5g048160 | 24.324 | 407 | 247 | 17 | 11 | 373 | 3 | 392 | 3.47e-12 | 67.8 |
MsG0880043681.01.T01 | MTR_4g023440 | 26.991 | 226 | 136 | 9 | 11 | 228 | 17 | 221 | 3.55e-12 | 67.4 |
MsG0880043681.01.T01 | MTR_2g048580 | 24.847 | 326 | 179 | 12 | 6 | 309 | 2 | 283 | 5.10e-12 | 66.6 |
MsG0880043681.01.T01 | MTR_3g007430 | 25.000 | 328 | 208 | 10 | 15 | 328 | 46 | 349 | 5.55e-12 | 67.0 |
MsG0880043681.01.T01 | MTR_3g024150 | 22.801 | 307 | 203 | 12 | 15 | 311 | 38 | 320 | 7.01e-12 | 66.6 |
MsG0880043681.01.T01 | MTR_4g116330 | 27.074 | 229 | 144 | 8 | 6 | 228 | 17 | 228 | 7.87e-12 | 66.2 |
MsG0880043681.01.T01 | MTR_2g021190 | 25.575 | 391 | 247 | 19 | 1 | 367 | 1 | 371 | 1.21e-11 | 65.9 |
MsG0880043681.01.T01 | MTR_0128s0020 | 26.207 | 290 | 149 | 15 | 12 | 265 | 18 | 278 | 2.09e-11 | 65.1 |
MsG0880043681.01.T01 | MTR_2g031680 | 25.000 | 316 | 194 | 14 | 9 | 307 | 3 | 292 | 2.80e-11 | 64.7 |
MsG0880043681.01.T01 | MTR_4g109280 | 25.879 | 313 | 197 | 13 | 10 | 313 | 6 | 292 | 3.06e-11 | 64.7 |
MsG0880043681.01.T01 | MTR_2g021252 | 23.926 | 326 | 210 | 10 | 15 | 334 | 50 | 343 | 4.34e-11 | 64.3 |
MsG0880043681.01.T01 | MTR_4g117750 | 27.187 | 320 | 169 | 14 | 12 | 303 | 3 | 286 | 4.73e-11 | 64.3 |
MsG0880043681.01.T01 | MTR_0128s0070 | 26.224 | 286 | 155 | 15 | 11 | 265 | 21 | 281 | 4.84e-11 | 64.3 |
MsG0880043681.01.T01 | MTR_4g118370 | 29.524 | 210 | 110 | 11 | 125 | 325 | 30 | 210 | 5.51e-11 | 62.8 |
MsG0880043681.01.T01 | MTR_5g096050 | 40.566 | 106 | 44 | 5 | 222 | 310 | 1 | 104 | 6.37e-11 | 59.7 |
MsG0880043681.01.T01 | MTR_2g031700 | 26.190 | 252 | 155 | 9 | 9 | 250 | 3 | 233 | 9.32e-11 | 62.4 |
MsG0880043681.01.T01 | MTR_6g016285 | 24.850 | 334 | 189 | 15 | 12 | 305 | 21 | 332 | 9.44e-11 | 63.5 |
MsG0880043681.01.T01 | MTR_6g048140 | 23.975 | 317 | 192 | 13 | 12 | 307 | 39 | 327 | 9.88e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880043681.01.T01 | AT3G06240 | 25.393 | 382 | 223 | 15 | 12 | 349 | 36 | 399 | 1.32e-19 | 90.1 |
MsG0880043681.01.T01 | AT3G16210 | 30.814 | 172 | 100 | 6 | 8 | 178 | 1 | 154 | 1.20e-15 | 77.8 |
MsG0880043681.01.T01 | AT4G12560 | 23.204 | 362 | 242 | 13 | 12 | 350 | 4 | 352 | 8.47e-14 | 72.8 |
MsG0880043681.01.T01 | AT4G12560 | 23.204 | 362 | 242 | 13 | 12 | 350 | 4 | 352 | 8.47e-14 | 72.8 |
MsG0880043681.01.T01 | AT4G12560 | 23.204 | 362 | 242 | 13 | 12 | 350 | 4 | 352 | 8.47e-14 | 72.8 |
MsG0880043681.01.T01 | AT3G21410 | 22.995 | 374 | 220 | 17 | 5 | 351 | 31 | 363 | 2.09e-11 | 65.5 |
Find 66 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAAACATGTTCATAAAATA+AGG | 0.140768 | 8:+29066052 | None:intergenic |
GGTTCTATGGTGTACTTAAA+TGG | 0.198117 | 8:-29065539 | MsG0880043681.01.T01:CDS |
TGGAAGTTGTATTTGCTTTC+TGG | 0.198875 | 8:-29065965 | MsG0880043681.01.T01:CDS |
CCACATATCAATATCAGTTT+TGG | 0.203667 | 8:-29065333 | MsG0880043681.01.T01:CDS |
TTGAATCGGTTTACTTGTTT+AGG | 0.276288 | 8:-29066103 | MsG0880043681.01.T01:CDS |
AATCAGAGGAATAAAGAATT+AGG | 0.292019 | 8:-29065084 | None:intergenic |
GAACATGGTTACTAATCTTT+TGG | 0.292868 | 8:+29066173 | None:intergenic |
AGACACTTGACAGTGTTAAA+TGG | 0.299248 | 8:-29065386 | MsG0880043681.01.T01:CDS |
TAATTCTTTATTCCTCTGAT+TGG | 0.312071 | 8:+29065086 | None:intergenic |
TTGATTCGCACAGTTCAAAA+TGG | 0.338704 | 8:-29065415 | MsG0880043681.01.T01:CDS |
TATGACTTCGGAAGGTTCTA+TGG | 0.341136 | 8:-29065552 | MsG0880043681.01.T01:CDS |
ACTTCCATTCATAGTTTAGA+AGG | 0.350954 | 8:+29065981 | None:intergenic |
GTTCTATGGTGTACTTAAAT+GGG | 0.355733 | 8:-29065538 | MsG0880043681.01.T01:CDS |
TTCTTGTAAATTACTGTTTG+AGG | 0.370329 | 8:+29065119 | None:intergenic |
TTGGTTATATTGAAGATGAT+TGG | 0.388046 | 8:-29065667 | MsG0880043681.01.T01:CDS |
GACACCACAAATGTTTCAAT+TGG | 0.391169 | 8:+29065482 | None:intergenic |
GCTTGTCTTGATTTAACTAC+TGG | 0.397331 | 8:-29065185 | MsG0880043681.01.T01:CDS |
AAAACATGTTCATAAAATAA+GGG | 0.412820 | 8:+29066053 | None:intergenic |
TACCTTTGAAATCTTTGAAT+CGG | 0.417435 | 8:-29066117 | MsG0880043681.01.T01:CDS |
TTCGATGTTGGACCTATGTC+CGG | 0.421122 | 8:-29065275 | MsG0880043681.01.T01:CDS |
TTACTTGTTTAGGTAAGTCT+TGG | 0.425909 | 8:-29066093 | MsG0880043681.01.T01:CDS |
AGAGGTTCATGTTCATATAT+CGG | 0.426129 | 8:+29065752 | None:intergenic |
TCCGGCATCGACCGTCCTAT+TGG | 0.429742 | 8:-29065257 | MsG0880043681.01.T01:CDS |
TCACGTTAGAGATGATTATA+AGG | 0.438137 | 8:-29065702 | MsG0880043681.01.T01:CDS |
AAGGGAAAGAGAGTGGTAAC+AGG | 0.443693 | 8:+29065437 | None:intergenic |
TAAATGGGGTTTGCCATTGG+TGG | 0.446728 | 8:-29065523 | MsG0880043681.01.T01:CDS |
TAGACTATATATATCCCAAT+GGG | 0.446831 | 8:+29065622 | None:intergenic |
ACCTTCTTCCCTGCTCCAAT+AGG | 0.455077 | 8:+29065242 | None:intergenic |
AAATGGGGTTTGCCATTGGT+GGG | 0.458430 | 8:-29065522 | MsG0880043681.01.T01:CDS |
GTCTCCTTCTAAACTATGAA+TGG | 0.465509 | 8:-29065985 | MsG0880043681.01.T01:CDS |
ATCGACCGTCCTATTGGAGC+AGG | 0.470642 | 8:-29065251 | MsG0880043681.01.T01:CDS |
ACTTAAATGGGGTTTGCCAT+TGG | 0.484681 | 8:-29065526 | MsG0880043681.01.T01:CDS |
ATAGAGAAGACGATATCTTC+AGG | 0.486644 | 8:+29066151 | None:intergenic |
AGAACAAAGTTCAAATGAAG+TGG | 0.489818 | 8:-29065931 | MsG0880043681.01.T01:CDS |
TCCAATAGGACGGTCGATGC+CGG | 0.515869 | 8:+29065256 | None:intergenic |
TTTGAACTGTGCGAATCAAA+GGG | 0.516619 | 8:+29065419 | None:intergenic |
TCCTATTGGAGCAGGGAAGA+AGG | 0.519539 | 8:-29065243 | MsG0880043681.01.T01:CDS |
AGTGGTAACAGGAACCTCAT+TGG | 0.527664 | 8:+29065448 | None:intergenic |
AACCCGGTGTCAATGAATCA+TGG | 0.530407 | 8:-29065307 | MsG0880043681.01.T01:CDS |
TCGACCAATTGAAACATTTG+TGG | 0.531111 | 8:-29065486 | MsG0880043681.01.T01:CDS |
AATGGGGTTTGCCATTGGTG+GGG | 0.540748 | 8:-29065521 | MsG0880043681.01.T01:CDS |
CCAAAACTGATATTGATATG+TGG | 0.547153 | 8:+29065333 | None:intergenic |
ATAGTCTACGAAGCAACTGT+TGG | 0.555895 | 8:-29065607 | MsG0880043681.01.T01:CDS |
TATAAGGTCCTTCTGCATGT+TGG | 0.556222 | 8:-29065686 | MsG0880043681.01.T01:CDS |
GGACGGTCGATGCCGGACAT+AGG | 0.557007 | 8:+29065263 | None:intergenic |
AACCGATTCAAAGATTTCAA+AGG | 0.563964 | 8:+29066115 | None:intergenic |
AGTCCATGATTCATTGACAC+CGG | 0.564772 | 8:+29065304 | None:intergenic |
TAACAGGAACCTCATTGGCC+AGG | 0.567874 | 8:+29065453 | None:intergenic |
TTCTATGGTGTACTTAAATG+GGG | 0.582197 | 8:-29065537 | MsG0880043681.01.T01:CDS |
GCACGTTATATGACTTCGGA+AGG | 0.591015 | 8:-29065560 | MsG0880043681.01.T01:CDS |
ATACGTCAACTACTGTGTTG+TGG | 0.592950 | 8:-29065820 | MsG0880043681.01.T01:CDS |
GACTATATATATCCCAATGG+GGG | 0.594109 | 8:+29065624 | None:intergenic |
GTCCATGATTCATTGACACC+GGG | 0.603279 | 8:+29065305 | None:intergenic |
GTAGACTATATATATCCCAA+TGG | 0.606497 | 8:+29065621 | None:intergenic |
AGACGATATCTTCAGGAACA+TGG | 0.612978 | 8:+29066158 | None:intergenic |
TCTTCCCTGCTCCAATAGGA+CGG | 0.616942 | 8:+29065246 | None:intergenic |
CAATATAACCAACATGCAGA+AGG | 0.625088 | 8:+29065678 | None:intergenic |
TGAAGATGATTGGATTCCAG+TGG | 0.628561 | 8:-29065657 | MsG0880043681.01.T01:CDS |
GCGAGCACGTTATATGACTT+CGG | 0.628681 | 8:-29065564 | MsG0880043681.01.T01:CDS |
CGAATCAAAGGGAAAGAGAG+TGG | 0.639771 | 8:+29065430 | None:intergenic |
ACTGGAGTAATTGAGAACAT+TGG | 0.662781 | 8:-29065167 | MsG0880043681.01.T01:CDS |
ATACTTGAACCTAAAATACA+CGG | 0.666950 | 8:+29065875 | None:intergenic |
TCGACCGTCCTATTGGAGCA+GGG | 0.676854 | 8:-29065250 | MsG0880043681.01.T01:CDS |
AGACTATATATATCCCAATG+GGG | 0.681820 | 8:+29065623 | None:intergenic |
ACTATATATATCCCAATGGG+GGG | 0.682418 | 8:+29065625 | None:intergenic |
GTTGTGGAATCCAGCTACCG+AGG | 0.683231 | 8:-29065804 | MsG0880043681.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACATGTTCATAAAATAA+GGG | + | Chr8:29065222-29065241 | None:intergenic | 15.0% |
!! | TAAAACATGTTCATAAAATA+AGG | + | Chr8:29065223-29065242 | None:intergenic | 15.0% |
!! | AAAAATATTATTCCAATCAG+AGG | - | Chr8:29066174-29066193 | MsG0880043681.01.T01:CDS | 20.0% |
!! | AAAAATTATTCCCGAAAATA+AGG | - | Chr8:29065495-29065514 | MsG0880043681.01.T01:CDS | 20.0% |
!! | AATCCATGAATATTAAAAAG+AGG | + | Chr8:29065541-29065560 | None:intergenic | 20.0% |
!!! | ATATTTTTGAGAAAAGATGA+TGG | - | Chr8:29066057-29066076 | MsG0880043681.01.T01:CDS | 20.0% |
!!! | ATTTTAGGTTCAAGTATTAA+TGG | - | Chr8:29065403-29065422 | MsG0880043681.01.T01:CDS | 20.0% |
!!! | CTTTTTAATATTCATGGATT+TGG | - | Chr8:29065541-29065560 | MsG0880043681.01.T01:CDS | 20.0% |
! | ATACTTGAACCTAAAATACA+CGG | + | Chr8:29065400-29065419 | None:intergenic | 25.0% |
! | TAATTCTTTATTCCTCTGAT+TGG | + | Chr8:29066189-29066208 | None:intergenic | 25.0% |
! | TAGACTATATATATCCCAAT+GGG | + | Chr8:29065653-29065672 | None:intergenic | 25.0% |
! | TTCTTGTAAATTACTGTTTG+AGG | + | Chr8:29066156-29066175 | None:intergenic | 25.0% |
! | TTGGTTATATTGAAGATGAT+TGG | - | Chr8:29065605-29065624 | MsG0880043681.01.T01:CDS | 25.0% |
!! | CACATATCAATATCAGTTTT+GGG | - | Chr8:29065940-29065959 | MsG0880043681.01.T01:CDS | 25.0% |
!! | GAACCTCTTTTTAATATTCA+TGG | - | Chr8:29065535-29065554 | MsG0880043681.01.T01:CDS | 25.0% |
!!! | GGGAATAATTTTTAATTCCT+CGG | + | Chr8:29065488-29065507 | None:intergenic | 25.0% |
!!! | TACCTTTGAAATCTTTGAAT+CGG | - | Chr8:29065155-29065174 | MsG0880043681.01.T01:CDS | 25.0% |
!!! | TTACTAATCTTTTGGTTTGT+TGG | + | Chr8:29065094-29065113 | None:intergenic | 25.0% |
ACTTCCATTCATAGTTTAGA+AGG | + | Chr8:29065294-29065313 | None:intergenic | 30.0% | |
AGAACAAAGTTCAAATGAAG+TGG | - | Chr8:29065341-29065360 | MsG0880043681.01.T01:CDS | 30.0% | |
AGACTATATATATCCCAATG+GGG | + | Chr8:29065652-29065671 | None:intergenic | 30.0% | |
AGAGGTTCATGTTCATATAT+CGG | + | Chr8:29065523-29065542 | None:intergenic | 30.0% | |
CCAAAACTGATATTGATATG+TGG | + | Chr8:29065942-29065961 | None:intergenic | 30.0% | |
GTAGACTATATATATCCCAA+TGG | + | Chr8:29065654-29065673 | None:intergenic | 30.0% | |
GTTCTATGGTGTACTTAAAT+GGG | - | Chr8:29065734-29065753 | MsG0880043681.01.T01:CDS | 30.0% | |
TCACGTTAGAGATGATTATA+AGG | - | Chr8:29065570-29065589 | MsG0880043681.01.T01:CDS | 30.0% | |
TTACTTGTTTAGGTAAGTCT+TGG | - | Chr8:29065179-29065198 | MsG0880043681.01.T01:CDS | 30.0% | |
TTCTATGGTGTACTTAAATG+GGG | - | Chr8:29065735-29065754 | MsG0880043681.01.T01:CDS | 30.0% | |
! | AACCGATTCAAAGATTTCAA+AGG | + | Chr8:29065160-29065179 | None:intergenic | 30.0% |
! | CCACATATCAATATCAGTTT+TGG | - | Chr8:29065939-29065958 | MsG0880043681.01.T01:CDS | 30.0% |
! | GAACATGGTTACTAATCTTT+TGG | + | Chr8:29065102-29065121 | None:intergenic | 30.0% |
! | TGCTATTATCCGTGTATTTT+AGG | - | Chr8:29065388-29065407 | MsG0880043681.01.T01:CDS | 30.0% |
! | TTGAATCGGTTTACTTGTTT+AGG | - | Chr8:29065169-29065188 | MsG0880043681.01.T01:CDS | 30.0% |
!!! | ATATATCGGAGCCTTATTTT+CGG | + | Chr8:29065509-29065528 | None:intergenic | 30.0% |
!!! | TAGCAACCTTTTTTGTCAAA+AGG | + | Chr8:29065373-29065392 | None:intergenic | 30.0% |
ACTATATATATCCCAATGGG+GGG | + | Chr8:29065650-29065669 | None:intergenic | 35.0% | |
ACTGGAGTAATTGAGAACAT+TGG | - | Chr8:29066105-29066124 | MsG0880043681.01.T01:CDS | 35.0% | |
AGACACTTGACAGTGTTAAA+TGG | - | Chr8:29065886-29065905 | MsG0880043681.01.T01:CDS | 35.0% | |
ATAGAGAAGACGATATCTTC+AGG | + | Chr8:29065124-29065143 | None:intergenic | 35.0% | |
CAATATAACCAACATGCAGA+AGG | + | Chr8:29065597-29065616 | None:intergenic | 35.0% | |
GACACCACAAATGTTTCAAT+TGG | + | Chr8:29065793-29065812 | None:intergenic | 35.0% | |
GACTATATATATCCCAATGG+GGG | + | Chr8:29065651-29065670 | None:intergenic | 35.0% | |
GCTTGTCTTGATTTAACTAC+TGG | - | Chr8:29066087-29066106 | MsG0880043681.01.T01:CDS | 35.0% | |
GGTTCTATGGTGTACTTAAA+TGG | - | Chr8:29065733-29065752 | MsG0880043681.01.T01:CDS | 35.0% | |
GTCTCCTTCTAAACTATGAA+TGG | - | Chr8:29065287-29065306 | MsG0880043681.01.T01:CDS | 35.0% | |
TCGACCAATTGAAACATTTG+TGG | - | Chr8:29065786-29065805 | MsG0880043681.01.T01:CDS | 35.0% | |
TGGAAGTTGTATTTGCTTTC+TGG | - | Chr8:29065307-29065326 | MsG0880043681.01.T01:CDS | 35.0% | |
TTTGAACTGTGCGAATCAAA+GGG | + | Chr8:29065856-29065875 | None:intergenic | 35.0% | |
! | CCACATCCTTTTGACAAAAA+AGG | - | Chr8:29065364-29065383 | MsG0880043681.01.T01:CDS | 35.0% |
! | TTGATTCGCACAGTTCAAAA+TGG | - | Chr8:29065857-29065876 | MsG0880043681.01.T01:CDS | 35.0% |
! | TTTTGAACTGTGCGAATCAA+AGG | + | Chr8:29065857-29065876 | None:intergenic | 35.0% |
!! | ATTTTTAATTCCTCGGTAGC+TGG | + | Chr8:29065481-29065500 | None:intergenic | 35.0% |
!!! | CCTTTTTTGTCAAAAGGATG+TGG | + | Chr8:29065367-29065386 | None:intergenic | 35.0% |
!!! | TATATCGGAGCCTTATTTTC+GGG | + | Chr8:29065508-29065527 | None:intergenic | 35.0% |
ACTTAAATGGGGTTTGCCAT+TGG | - | Chr8:29065746-29065765 | MsG0880043681.01.T01:CDS | 40.0% | |
AGACGATATCTTCAGGAACA+TGG | + | Chr8:29065117-29065136 | None:intergenic | 40.0% | |
AGTCCATGATTCATTGACAC+CGG | + | Chr8:29065971-29065990 | None:intergenic | 40.0% | |
ATACGTCAACTACTGTGTTG+TGG | - | Chr8:29065452-29065471 | MsG0880043681.01.T01:CDS | 40.0% | |
ATAGTCTACGAAGCAACTGT+TGG | - | Chr8:29065665-29065684 | MsG0880043681.01.T01:CDS | 40.0% | |
TATAAGGTCCTTCTGCATGT+TGG | - | Chr8:29065586-29065605 | MsG0880043681.01.T01:CDS | 40.0% | |
TATGACTTCGGAAGGTTCTA+TGG | - | Chr8:29065720-29065739 | MsG0880043681.01.T01:CDS | 40.0% | |
TGAAGATGATTGGATTCCAG+TGG | - | Chr8:29065615-29065634 | MsG0880043681.01.T01:CDS | 40.0% | |
! | AACATGTTTTTCCCCACCAA+TGG | + | Chr8:29065765-29065784 | None:intergenic | 40.0% |
! | ATTTGTGGTGTCTTTTGACC+TGG | - | Chr8:29065801-29065820 | MsG0880043681.01.T01:CDS | 40.0% |
! | TGGACTAAGCTTTTCGATGT+TGG | - | Chr8:29065985-29066004 | MsG0880043681.01.T01:CDS | 40.0% |
!!! | ATATCAGTTTTGGGAGAACC+CGG | - | Chr8:29065949-29065968 | MsG0880043681.01.T01:CDS | 40.0% |
AAATGGGGTTTGCCATTGGT+GGG | - | Chr8:29065750-29065769 | MsG0880043681.01.T01:CDS | 45.0% | |
AAGGGAAAGAGAGTGGTAAC+AGG | + | Chr8:29065838-29065857 | None:intergenic | 45.0% | |
AGTGGTAACAGGAACCTCAT+TGG | + | Chr8:29065827-29065846 | None:intergenic | 45.0% | |
ATATATATCCCAATGGGGGG+CGG | + | Chr8:29065647-29065666 | None:intergenic | 45.0% | |
CGAATCAAAGGGAAAGAGAG+TGG | + | Chr8:29065845-29065864 | None:intergenic | 45.0% | |
GCACGTTATATGACTTCGGA+AGG | - | Chr8:29065712-29065731 | MsG0880043681.01.T01:CDS | 45.0% | |
GCGAGCACGTTATATGACTT+CGG | - | Chr8:29065708-29065727 | MsG0880043681.01.T01:CDS | 45.0% | |
GTCCATGATTCATTGACACC+GGG | + | Chr8:29065970-29065989 | None:intergenic | 45.0% | |
TAAATGGGGTTTGCCATTGG+TGG | - | Chr8:29065749-29065768 | MsG0880043681.01.T01:CDS | 45.0% | |
TTCGATGTTGGACCTATGTC+CGG | - | Chr8:29065997-29066016 | MsG0880043681.01.T01:CDS | 45.0% | |
! | AACCCGGTGTCAATGAATCA+TGG | - | Chr8:29065965-29065984 | MsG0880043681.01.T01:CDS | 45.0% |
AATGGGGTTTGCCATTGGTG+GGG | - | Chr8:29065751-29065770 | MsG0880043681.01.T01:CDS | 50.0% | |
ACCTTCTTCCCTGCTCCAAT+AGG | + | Chr8:29066033-29066052 | None:intergenic | 50.0% | |
TAACAGGAACCTCATTGGCC+AGG | + | Chr8:29065822-29065841 | None:intergenic | 50.0% | |
TATATATCCCAATGGGGGGC+GGG | + | Chr8:29065646-29065665 | None:intergenic | 50.0% | |
TCCTATTGGAGCAGGGAAGA+AGG | - | Chr8:29066029-29066048 | MsG0880043681.01.T01:CDS | 50.0% | |
TCTTCCCTGCTCCAATAGGA+CGG | + | Chr8:29066029-29066048 | None:intergenic | 50.0% | |
! | GTCTTTTGACCTGGCCAATG+AGG | - | Chr8:29065810-29065829 | MsG0880043681.01.T01:CDS | 50.0% |
ATCGACCGTCCTATTGGAGC+AGG | - | Chr8:29066021-29066040 | MsG0880043681.01.T01:CDS | 55.0% | |
GTTGTGGAATCCAGCTACCG+AGG | - | Chr8:29065468-29065487 | MsG0880043681.01.T01:CDS | 55.0% | |
TCCAATAGGACGGTCGATGC+CGG | + | Chr8:29066019-29066038 | None:intergenic | 55.0% | |
TCGACCGTCCTATTGGAGCA+GGG | - | Chr8:29066022-29066041 | MsG0880043681.01.T01:CDS | 55.0% | |
!! | TCCGGCATCGACCGTCCTAT+TGG | - | Chr8:29066015-29066034 | MsG0880043681.01.T01:CDS | 60.0% |
ATATCCCAATGGGGGGCGGG+TGG | + | Chr8:29065643-29065662 | None:intergenic | 65.0% | |
GGACGGTCGATGCCGGACAT+AGG | + | Chr8:29066012-29066031 | None:intergenic | 65.0% | |
GGCACCACCCGCCCCCCATT+GGG | - | Chr8:29065636-29065655 | MsG0880043681.01.T01:CDS | 75.0% | |
TGGCACCACCCGCCCCCCAT+TGG | - | Chr8:29065635-29065654 | MsG0880043681.01.T01:CDS | 75.0% | |
!!! | TGGGGGGCGGGTGGTGCCAC+TGG | + | Chr8:29065634-29065653 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 29065085 | 29066209 | 29065085 | ID=MsG0880043681.01;Name=MsG0880043681.01 |
Chr8 | mRNA | 29065085 | 29066209 | 29065085 | ID=MsG0880043681.01.T01;Parent=MsG0880043681.01;Name=MsG0880043681.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|374 |
Chr8 | exon | 29065085 | 29066209 | 29065085 | ID=MsG0880043681.01.T01:exon:4472;Parent=MsG0880043681.01.T01 |
Chr8 | CDS | 29065085 | 29066209 | 29065085 | ID=MsG0880043681.01.T01:cds;Parent=MsG0880043681.01.T01 |
Gene Sequence |
Protein sequence |