AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027961.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027961.01.T01 MTR_5g037680 51.399 393 159 8 20 391 3 384 1.06e-125 370
MsG0580027961.01.T01 MTR_5g059430 50.481 416 156 10 20 394 21 427 9.96e-125 367
MsG0580027961.01.T01 MTR_5g069390 48.878 401 164 11 20 388 21 412 3.16e-115 345
MsG0580027961.01.T01 MTR_0054s0100 40.625 416 200 12 10 390 2 405 3.77e-88 273
MsG0580027961.01.T01 MTR_4g102410 42.965 398 182 14 24 388 60 445 1.54e-87 272
MsG0580027961.01.T01 MTR_0054s0090 40.625 416 198 12 10 390 2 403 3.61e-87 270
MsG0580027961.01.T01 MTR_4g130330 43.781 402 178 14 19 388 1 386 4.42e-87 269
MsG0580027961.01.T01 MTR_6g086825 41.935 403 184 11 24 390 69 457 6.46e-87 271
MsG0580027961.01.T01 MTR_2g038680 40.476 420 193 9 11 388 2 406 2.60e-86 268
MsG0580027961.01.T01 MTR_5g096630 41.106 416 195 15 14 390 7 411 7.13e-86 267
MsG0580027961.01.T01 MTR_2g021800 42.716 405 180 12 24 386 15 409 4.33e-85 265
MsG0580027961.01.T01 MTR_0129s0070 41.960 398 176 12 24 388 16 391 2.05e-84 263
MsG0580027961.01.T01 MTR_5g096910 41.795 390 185 11 24 388 16 388 3.07e-84 262
MsG0580027961.01.T01 MTR_6g090180 40.334 419 203 13 6 390 30 435 3.74e-84 263
MsG0580027961.01.T01 MTR_6g079810 40.610 426 200 12 2 388 47 458 7.82e-84 263
MsG0580027961.01.T01 MTR_0134s0060 40.048 417 196 12 14 387 1 406 3.55e-83 260
MsG0580027961.01.T01 MTR_5g097220 40.191 418 191 10 16 390 4 405 3.96e-83 260
MsG0580027961.01.T01 MTR_6g079770 41.707 410 181 12 24 388 16 412 2.84e-82 258
MsG0580027961.01.T01 MTR_0129s0120 41.000 400 181 12 24 390 16 393 3.67e-82 257
MsG0580027961.01.T01 MTR_4g028510 42.857 392 186 11 25 388 16 397 4.81e-82 258
MsG0580027961.01.T01 MTR_2g021770 38.903 401 198 7 25 388 12 402 5.38e-82 257
MsG0580027961.01.T01 MTR_4g028680 41.667 408 194 13 8 388 5 395 6.69e-82 256
MsG0580027961.01.T01 MTR_2g022000 41.089 404 185 12 24 385 15 407 1.24e-81 257
MsG0580027961.01.T01 MTR_5g066420 81.208 149 28 0 234 382 1 149 1.39e-81 246
MsG0580027961.01.T01 MTR_8g063440 39.394 396 201 9 14 388 1 378 2.83e-81 254
MsG0580027961.01.T01 MTR_8g012090 42.779 367 155 10 14 362 5 334 5.05e-80 249
MsG0580027961.01.T01 MTR_6g080680 40.389 411 199 12 1 387 1 389 1.43e-79 250
MsG0580027961.01.T01 MTR_5g097330 41.045 402 186 13 24 390 15 400 3.21e-78 247
MsG0580027961.01.T01 MTR_5g097680 39.953 428 201 12 10 388 2 422 5.94e-78 247
MsG0580027961.01.T01 MTR_4g028660 39.853 409 203 12 8 390 5 396 3.77e-77 244
MsG0580027961.01.T01 MTR_4g027450 39.853 409 203 12 8 390 5 396 3.77e-77 244
MsG0580027961.01.T01 MTR_2g021950 38.875 409 208 11 4 388 2 392 4.45e-77 244
MsG0580027961.01.T01 MTR_0129s0050 39.312 407 187 12 24 387 13 402 6.70e-77 244
MsG0580027961.01.T01 MTR_3g011120 39.523 377 192 11 24 383 13 370 1.83e-76 241
MsG0580027961.01.T01 MTR_7g069550 40.897 379 172 12 25 368 14 375 4.46e-75 239
MsG0580027961.01.T01 MTR_6g478230 39.048 420 207 12 2 390 3 404 1.73e-74 238
MsG0580027961.01.T01 MTR_7g079640 41.287 373 178 17 16 370 4 353 5.62e-74 235
MsG0580027961.01.T01 MTR_7g017040 37.500 392 205 9 24 388 15 393 1.16e-73 235
MsG0580027961.01.T01 MTR_0831s0010 37.713 411 199 11 8 388 33 416 1.78e-73 235
MsG0580027961.01.T01 MTR_6g461660 40.342 409 197 13 10 388 4 395 4.39e-73 234
MsG0580027961.01.T01 MTR_8g464770 38.381 383 198 9 24 387 11 374 4.50e-73 233
MsG0580027961.01.T01 MTR_5g091140 40.256 390 178 15 9 370 32 394 1.73e-72 233
MsG0580027961.01.T01 MTR_7g017130 38.918 388 200 10 25 388 18 392 5.40e-72 231
MsG0580027961.01.T01 MTR_4g055820 40.323 372 169 12 15 349 4 359 8.73e-72 229
MsG0580027961.01.T01 MTR_4g028750 39.844 384 191 13 14 368 1 373 2.13e-71 229
MsG0580027961.01.T01 MTR_2g066200 37.437 398 211 14 14 388 1 383 3.48e-71 228
MsG0580027961.01.T01 MTR_8g046310 40.369 379 192 12 24 388 15 373 4.24e-71 228
MsG0580027961.01.T01 MTR_4g117550 39.541 392 169 13 24 387 16 367 9.12e-71 227
MsG0580027961.01.T01 MTR_7g017170 38.000 400 199 11 25 388 18 404 1.05e-70 228
MsG0580027961.01.T01 MTR_6g090250 38.060 402 186 12 43 390 29 421 1.06e-69 226
MsG0580027961.01.T01 MTR_2g104340 38.614 404 194 13 18 387 7 390 2.91e-69 224
MsG0580027961.01.T01 MTR_5g097350 39.948 388 174 15 34 390 25 384 3.56e-69 223
MsG0580027961.01.T01 MTR_5g097820 44.853 272 117 9 11 260 9 269 5.62e-68 216
MsG0580027961.01.T01 MTR_2g034700 39.842 379 190 14 24 386 13 369 8.12e-68 219
MsG0580027961.01.T01 MTR_5g092850 37.349 415 196 14 15 388 6 397 8.80e-68 220
MsG0580027961.01.T01 MTR_1g007450 37.656 401 194 16 14 379 3 382 1.28e-67 220
MsG0580027961.01.T01 MTR_5g074850 40.657 396 176 16 15 370 25 401 2.63e-67 229
MsG0580027961.01.T01 MTR_2g066170 36.776 397 215 14 14 389 1 382 5.12e-67 218
MsG0580027961.01.T01 MTR_8g039500 37.912 364 193 11 14 362 1 346 2.06e-66 214
MsG0580027961.01.T01 MTR_8g467670 36.842 380 203 11 24 386 13 372 1.42e-65 214
MsG0580027961.01.T01 MTR_2g064950 36.409 401 209 11 14 386 1 383 1.93e-65 214
MsG0580027961.01.T01 MTR_6g078010 40.000 345 176 11 62 389 1 331 2.27e-65 212
MsG0580027961.01.T01 MTR_8g064890 37.592 407 200 13 7 388 6 383 2.37e-65 213
MsG0580027961.01.T01 MTR_8g041270 37.897 409 199 12 18 387 8 400 3.11e-65 213
MsG0580027961.01.T01 MTR_4g014370 35.194 412 207 12 24 390 10 406 2.46e-64 211
MsG0580027961.01.T01 MTR_8g046220 36.232 414 187 10 24 388 16 401 8.86e-64 209
MsG0580027961.01.T01 MTR_5g092860 39.106 358 161 14 43 370 20 350 9.32e-64 208
MsG0580027961.01.T01 MTR_1g007410 35.885 418 210 18 5 385 2 398 1.15e-63 209
MsG0580027961.01.T01 MTR_5g075370 39.744 390 177 16 24 372 7 379 1.95e-62 214
MsG0580027961.01.T01 MTR_2g065860 35.162 401 216 13 14 388 1 383 2.04e-62 206
MsG0580027961.01.T01 MTR_1g053510 37.352 423 195 18 14 388 1 401 8.42e-62 204
MsG0580027961.01.T01 MTR_2g104280 36.232 414 199 13 18 387 7 399 1.40e-61 204
MsG0580027961.01.T01 MTR_5g024260 36.896 393 194 16 10 370 13 383 4.58e-61 202
MsG0580027961.01.T01 MTR_8g046200 37.002 427 183 16 24 388 15 417 5.66e-61 203
MsG0580027961.01.T01 MTR_5g072060 39.554 359 187 12 24 368 5 347 2.13e-60 206
MsG0580027961.01.T01 MTR_8g032980 35.446 426 200 12 18 387 9 415 5.99e-59 197
MsG0580027961.01.T01 MTR_8g013000 36.533 375 176 12 17 351 1 353 7.54e-59 197
MsG0580027961.01.T01 MTR_2g065840 34.336 399 223 13 14 388 1 384 1.07e-58 196
MsG0580027961.01.T01 MTR_8g064790 35.904 376 173 11 24 388 14 332 5.91e-58 192
MsG0580027961.01.T01 MTR_8g063330 33.671 395 195 13 18 377 7 369 1.10e-57 196
MsG0580027961.01.T01 MTR_8g036970 38.122 362 164 13 29 380 2 313 1.47e-57 192
MsG0580027961.01.T01 MTR_2g066150 36.176 387 203 13 14 388 1 355 4.29e-57 191
MsG0580027961.01.T01 MTR_8g033140 34.192 427 198 14 18 387 12 412 6.16e-56 189
MsG0580027961.01.T01 MTR_7g111700 36.856 388 181 15 24 388 14 360 1.25e-54 184
MsG0580027961.01.T01 MTR_4g014370 33.780 373 182 9 24 390 21 334 2.71e-54 183
MsG0580027961.01.T01 MTR_4g007940 35.311 354 175 12 63 385 4 334 4.75e-54 182
MsG0580027961.01.T01 MTR_1g098180 32.642 386 207 9 18 387 12 360 2.91e-53 181
MsG0580027961.01.T01 MTR_5g074800 37.079 356 170 13 64 385 1 336 4.67e-53 180
MsG0580027961.01.T01 MTR_1g007430 38.439 346 155 15 36 351 7 324 1.38e-52 178
MsG0580027961.01.T01 MTR_5g097850 41.549 284 108 10 117 388 3 240 2.00e-52 175
MsG0580027961.01.T01 MTR_8g033110 32.319 427 220 12 15 390 4 412 6.26e-52 179
MsG0580027961.01.T01 MTR_5g096900 40.867 323 151 14 19 316 6 313 1.16e-51 176
MsG0580027961.01.T01 MTR_5g064700 36.216 370 180 14 66 388 3 363 3.46e-51 176
MsG0580027961.01.T01 MTR_6g090260 46.154 195 95 4 198 390 75 261 3.42e-50 170
MsG0580027961.01.T01 MTR_6g090260 49.275 69 35 0 6 74 1 69 1.59e-12 67.8
MsG0580027961.01.T01 MTR_8g018110 30.660 424 221 11 15 394 4 398 1.33e-49 172
MsG0580027961.01.T01 MTR_6g004450 43.697 238 108 4 165 390 43 266 1.36e-49 169
MsG0580027961.01.T01 MTR_7g023800 35.976 328 177 10 64 384 1 302 1.87e-49 169
MsG0580027961.01.T01 MTR_6g079790 38.014 292 142 9 128 388 21 304 7.28e-48 165
MsG0580027961.01.T01 MTR_5g086590 43.644 236 108 8 141 365 10 231 4.32e-47 161
MsG0580027961.01.T01 MTR_8g063350 34.737 380 172 16 24 383 13 336 9.79e-47 163
MsG0580027961.01.T01 MTR_6g087620 37.987 308 141 9 96 383 2 279 1.50e-46 161
MsG0580027961.01.T01 MTR_8g033090 30.824 425 208 13 24 390 13 409 1.04e-45 162
MsG0580027961.01.T01 MTR_8g063370 35.526 380 199 16 29 385 28 384 2.06e-45 161
MsG0580027961.01.T01 MTR_7g016930 35.312 320 158 11 24 324 15 304 5.72e-44 155
MsG0580027961.01.T01 MTR_5g022850 31.496 381 171 9 20 370 11 331 3.16e-43 154
MsG0580027961.01.T01 MTR_8g063310 31.888 392 226 16 18 385 15 389 3.28e-43 155
MsG0580027961.01.T01 MTR_2g021920 39.241 237 116 4 173 388 39 268 2.91e-42 149
MsG0580027961.01.T01 MTR_5g043605 31.000 400 198 14 1 388 1 334 1.13e-41 150
MsG0580027961.01.T01 MTR_7g104710 37.586 290 153 9 24 306 16 284 1.88e-41 149
MsG0580027961.01.T01 MTR_5g023970 42.647 204 105 6 188 390 1 193 7.64e-41 143
MsG0580027961.01.T01 MTR_1g050312 36.129 310 143 12 94 385 15 287 1.33e-40 145
MsG0580027961.01.T01 MTR_5g097660 62.185 119 43 2 277 394 4 121 3.21e-40 139
MsG0580027961.01.T01 MTR_5g068490 34.615 286 165 8 104 388 8 272 6.74e-40 143
MsG0580027961.01.T01 MTR_5g096920 46.452 155 73 4 234 387 1 146 1.38e-38 136
MsG0580027961.01.T01 MTR_5g097650 52.349 149 58 4 16 162 13 150 1.93e-38 135
MsG0580027961.01.T01 MTR_6g070880 37.449 243 112 7 9 214 16 255 7.19e-38 137
MsG0580027961.01.T01 MTR_6g071420 37.449 243 112 7 9 214 16 255 7.19e-38 137
MsG0580027961.01.T01 MTR_3g018750 37.500 240 118 8 173 388 5 236 2.65e-37 135
MsG0580027961.01.T01 MTR_6g079730 45.270 148 80 1 243 390 1 147 3.45e-37 132
MsG0580027961.01.T01 MTR_1g076810 41.315 213 98 8 24 214 17 224 4.82e-37 142
MsG0580027961.01.T01 MTR_1g050308 40.343 233 111 10 2 214 11 235 1.12e-36 137
MsG0580027961.01.T01 MTR_1g050308 47.170 106 51 2 285 388 240 342 7.59e-19 87.4
MsG0580027961.01.T01 MTR_5g094350 35.294 289 122 9 24 274 12 273 2.80e-36 134
MsG0580027961.01.T01 MTR_5g076490 34.571 350 187 13 62 388 1 331 2.84e-36 135
MsG0580027961.01.T01 MTR_8g033000 30.649 385 180 12 62 387 1 357 3.52e-36 135
MsG0580027961.01.T01 MTR_8g073570 42.169 166 85 4 24 182 9 170 7.11e-35 127
MsG0580027961.01.T01 MTR_5g097540 34.884 301 117 9 62 351 1 233 1.30e-34 130
MsG0580027961.01.T01 MTR_6g009350 40.816 196 94 5 173 356 10 195 4.48e-33 123
MsG0580027961.01.T01 MTR_2g022020 57.692 104 42 1 284 387 13 114 5.37e-31 114
MsG0580027961.01.T01 MTR_8g035690 32.550 298 136 9 136 387 19 297 6.98e-31 120
MsG0580027961.01.T01 MTR_7g019250 38.009 221 85 6 173 372 226 415 5.42e-30 120
MsG0580027961.01.T01 MTR_3g030620 42.331 163 86 5 229 387 18 176 2.32e-29 112
MsG0580027961.01.T01 MTR_6g465360 38.579 197 96 7 10 185 47 239 3.20e-29 115
MsG0580027961.01.T01 MTR_5g037190 31.559 263 130 10 25 269 16 246 9.46e-29 113
MsG0580027961.01.T01 MTR_4g016000 34.247 219 90 7 149 343 2 190 3.22e-27 108
MsG0580027961.01.T01 MTR_7g017150 41.379 174 91 4 198 371 82 244 9.49e-27 108
MsG0580027961.01.T01 MTR_1g115205 35.294 238 107 9 25 243 29 238 3.09e-26 106
MsG0580027961.01.T01 MTR_7g017120 40.571 175 93 4 198 372 81 244 3.60e-26 106
MsG0580027961.01.T01 MTR_5g036250 61.250 80 30 1 306 385 25 103 5.17e-26 103
MsG0580027961.01.T01 MTR_5g096070 38.857 175 72 6 12 178 11 158 4.07e-25 100
MsG0580027961.01.T01 MTR_1g047080 27.273 341 171 11 62 388 1 278 2.56e-24 102
MsG0580027961.01.T01 MTR_4g116330 26.536 407 236 17 2 387 7 371 4.63e-24 102
MsG0580027961.01.T01 MTR_5g098950 33.778 225 90 6 146 351 90 274 5.94e-24 100
MsG0580027961.01.T01 MTR_5g086780 47.170 106 55 1 264 369 124 228 6.95e-24 99.4
MsG0580027961.01.T01 MTR_5g086780 54.386 57 24 1 9 65 2 56 1.39e-11 64.3
MsG0580027961.01.T01 MTR_1g097560 27.926 376 221 16 27 390 38 375 4.38e-23 100
MsG0580027961.01.T01 MTR_3g103020 25.255 392 251 16 9 387 7 369 4.80e-23 99.8
MsG0580027961.01.T01 MTR_4g023090 26.509 381 233 14 4 376 3 344 7.34e-22 96.7
MsG0580027961.01.T01 MTR_2g104260 32.867 286 140 13 18 267 7 276 8.13e-22 94.7
MsG0580027961.01.T01 MTR_4g021785 25.707 389 228 14 17 387 1 346 2.02e-21 94.7
MsG0580027961.01.T01 MTR_4g094365 25.464 377 246 11 21 387 4 355 2.11e-21 95.1
MsG0580027961.01.T01 MTR_4g023080 26.455 378 238 13 17 387 1 345 2.30e-21 94.7
MsG0580027961.01.T01 MTR_8g101580 26.648 349 210 13 29 361 50 368 3.87e-21 94.7
MsG0580027961.01.T01 MTR_1g094210 27.586 348 213 13 27 365 59 376 4.26e-21 94.7
MsG0580027961.01.T01 MTR_1g094210 27.954 347 211 13 27 364 59 375 6.39e-21 94.0
MsG0580027961.01.T01 MTR_8g041440 44.860 107 41 2 14 120 6 94 7.24e-21 87.4
MsG0580027961.01.T01 MTR_5g096050 46.903 113 46 3 234 336 1 109 1.27e-20 87.0
MsG0580027961.01.T01 MTR_2g021150 28.080 349 213 15 24 361 13 334 2.10e-20 92.0
MsG0580027961.01.T01 MTR_2g055970 26.786 392 251 16 10 390 196 562 2.20e-20 93.6
MsG0580027961.01.T01 MTR_2g046830 23.598 428 257 16 1 394 1 392 2.54e-20 92.4
MsG0580027961.01.T01 MTR_2g046920 26.183 317 200 11 19 328 18 307 3.52e-20 91.7
MsG0580027961.01.T01 MTR_1g097490 27.838 370 225 14 28 387 52 389 3.88e-20 91.7
MsG0580027961.01.T01 MTR_3g013740 26.171 363 220 14 14 356 33 367 6.30e-20 91.3
MsG0580027961.01.T01 MTR_2g046900 26.346 353 201 14 1 328 1 319 6.31e-20 90.9
MsG0580027961.01.T01 MTR_4g116330 24.372 398 212 15 8 387 6 332 2.14e-19 89.0
MsG0580027961.01.T01 MTR_1g097330 29.677 310 180 14 27 328 18 297 2.40e-19 89.7
MsG0580027961.01.T01 MTR_5g091150 31.481 216 94 7 107 300 2 185 4.07e-19 85.1
MsG0580027961.01.T01 MTR_2g046800 26.488 336 203 10 20 328 9 327 6.36e-19 88.2
MsG0580027961.01.T01 MTR_1g054575 25.628 398 248 14 9 391 36 400 1.67e-18 87.8
MsG0580027961.01.T01 MTR_7g101200 33.645 214 108 10 146 350 40 228 2.25e-18 84.0
MsG0580027961.01.T01 MTR_2g029990 25.595 336 216 14 28 356 54 362 2.29e-18 86.7
MsG0580027961.01.T01 MTR_1g068835 24.800 375 230 16 28 381 7 350 2.69e-18 86.3
MsG0580027961.01.T01 MTR_8g467140 29.520 271 161 14 3 266 13 260 3.55e-18 85.1
MsG0580027961.01.T01 MTR_5g070080 24.041 391 255 13 20 387 5 376 1.67e-17 84.0
MsG0580027961.01.T01 MTR_7g070440 25.291 344 180 11 19 326 1 303 1.86e-17 83.6
MsG0580027961.01.T01 MTR_2g047832 26.703 367 195 17 1 328 1 332 4.41e-17 82.8
MsG0580027961.01.T01 MTR_4g023440 24.093 386 219 12 8 387 6 323 4.95e-17 82.0
MsG0580027961.01.T01 MTR_3g019290 31.285 179 76 4 16 185 5 145 6.32e-17 78.6
MsG0580027961.01.T01 MTR_3g014540 26.404 356 201 16 28 361 32 348 9.71e-17 81.6
MsG0580027961.01.T01 MTR_5g022420 25.410 366 236 12 14 375 15 347 9.75e-17 81.6
MsG0580027961.01.T01 MTR_4g117850 24.734 376 237 16 28 387 26 371 1.14e-16 81.3
MsG0580027961.01.T01 MTR_4g107820 27.826 345 195 16 27 356 38 343 2.01e-16 80.5
MsG0580027961.01.T01 MTR_4g107780 27.826 345 195 16 27 356 38 343 2.01e-16 80.5
MsG0580027961.01.T01 MTR_4g107820 27.826 345 195 16 27 356 38 343 2.29e-16 80.5
MsG0580027961.01.T01 MTR_4g107780 27.826 345 195 16 27 356 38 343 2.94e-16 80.5
MsG0580027961.01.T01 MTR_4g023130 24.267 375 209 14 17 387 1 304 3.03e-16 79.3
MsG0580027961.01.T01 MTR_1g050542 26.225 347 214 13 27 361 60 376 3.31e-16 80.1
MsG0580027961.01.T01 MTR_3g013770 26.349 315 191 13 28 328 36 323 4.19e-16 79.7
MsG0580027961.01.T01 MTR_1g055135 25.377 398 250 18 15 392 3 373 5.71e-16 79.3
MsG0580027961.01.T01 MTR_3g034130 25.798 376 225 12 17 367 1 347 7.56e-16 78.6
MsG0580027961.01.T01 MTR_0667s0010 24.129 373 223 16 28 365 9 356 1.05e-15 78.6
MsG0580027961.01.T01 MTR_1g050305 52.439 82 34 2 294 370 21 102 1.41e-15 73.6
MsG0580027961.01.T01 MTR_7g056820 26.781 351 213 14 28 354 10 340 1.77e-15 77.8
MsG0580027961.01.T01 MTR_4g117770 24.675 385 233 15 24 387 10 358 4.33e-15 76.6
MsG0580027961.01.T01 MTR_4g117810 24.675 385 233 15 24 387 10 358 4.33e-15 76.6
MsG0580027961.01.T01 MTR_5g070130 24.422 389 246 14 20 387 6 367 5.59e-15 76.3
MsG0580027961.01.T01 MTR_4g024890 24.225 355 226 13 24 352 9 346 6.18e-15 76.3
MsG0580027961.01.T01 MTR_2g028130 22.835 381 228 18 28 365 8 365 6.30e-15 76.3
MsG0580027961.01.T01 MTR_4g117780 25.135 370 242 13 28 387 14 358 1.05e-14 75.5
MsG0580027961.01.T01 MTR_4g023120 23.360 381 246 14 28 387 6 361 1.07e-14 75.5
MsG0580027961.01.T01 MTR_3g034180 24.688 401 253 18 17 394 115 489 1.51e-14 75.5
MsG0580027961.01.T01 MTR_3g011060 24.586 362 215 13 28 365 31 358 1.94e-14 74.7
MsG0580027961.01.T01 MTR_2g021252 31.313 198 114 10 28 214 50 236 1.97e-14 74.7
MsG0580027961.01.T01 MTR_4g094400 40.952 105 49 3 233 326 9 111 2.02e-14 70.1
MsG0580027961.01.T01 MTR_2g031720 24.274 379 233 18 28 381 9 358 2.66e-14 74.3
MsG0580027961.01.T01 MTR_3g014570 26.332 319 184 14 28 329 32 316 3.36e-14 73.9
MsG0580027961.01.T01 MTR_4g023200 25.762 361 223 16 39 387 24 351 3.98e-14 73.6
MsG0580027961.01.T01 MTR_1g009110 24.332 374 233 16 28 377 17 364 4.19e-14 73.6
MsG0580027961.01.T01 MTR_4g023070 23.097 381 247 15 28 387 6 361 4.78e-14 73.2
MsG0580027961.01.T01 MTR_4g133170 22.222 360 220 15 28 363 7 330 5.78e-14 73.2
MsG0580027961.01.T01 MTR_2g048580 24.528 318 196 12 20 330 3 283 6.50e-14 72.8
MsG0580027961.01.T01 MTR_8g433040 24.688 401 237 14 6 387 1 355 1.09e-13 72.0
MsG0580027961.01.T01 MTR_8g032380 24.688 401 237 14 6 387 1 355 1.09e-13 72.0
MsG0580027961.01.T01 MTR_4g117750 26.121 379 219 18 38 392 16 357 1.17e-13 72.8
MsG0580027961.01.T01 MTR_2g028140 22.977 383 240 14 28 373 8 372 1.29e-13 72.4
MsG0580027961.01.T01 MTR_2g021190 24.706 340 214 15 28 356 24 332 2.37e-13 71.2
MsG0580027961.01.T01 MTR_4g023380 23.138 376 225 11 39 387 30 368 3.12e-13 70.9
MsG0580027961.01.T01 MTR_3g047580 32.117 137 69 3 24 158 13 127 3.33e-13 66.6
MsG0580027961.01.T01 MTR_8g073550 28.017 232 132 10 1 213 1 216 3.57e-13 68.9
MsG0580027961.01.T01 MTR_7g066000 25.862 348 212 16 7 329 7 333 4.14e-13 70.9
MsG0580027961.01.T01 MTR_7g079400 26.715 277 171 13 127 389 68 326 5.77e-13 69.7
MsG0580027961.01.T01 MTR_5g057790 24.189 339 214 15 28 357 49 353 5.87e-13 70.1
MsG0580027961.01.T01 MTR_5g068040 25.588 340 171 15 23 329 14 304 5.93e-13 70.1
MsG0580027961.01.T01 MTR_3g013950 22.622 389 228 14 33 376 14 374 6.18e-13 70.1
MsG0580027961.01.T01 MTR_2g021155 28.571 308 184 16 28 326 39 319 7.73e-13 70.9
MsG0580027961.01.T01 MTR_4g023150 24.930 357 233 13 38 387 23 351 7.98e-13 69.7
MsG0580027961.01.T01 MTR_3g010590 25.000 308 185 10 28 328 42 310 1.03e-12 69.3
MsG0580027961.01.T01 MTR_2g026010 22.678 366 223 17 44 381 23 356 1.07e-12 69.3
MsG0580027961.01.T01 MTR_7g050520 23.739 337 214 11 6 325 3 313 1.25e-12 69.3
MsG0580027961.01.T01 MTR_6g087660 44.872 78 41 1 9 84 2 79 1.30e-12 66.6
MsG0580027961.01.T01 MTR_7g407070 26.687 326 191 15 28 328 35 337 1.43e-12 68.9
MsG0580027961.01.T01 MTR_2g031680 23.529 374 235 16 28 381 9 351 1.56e-12 68.9
MsG0580027961.01.T01 MTR_5g070088 24.365 394 255 12 19 387 1 376 2.04e-12 68.6
MsG0580027961.01.T01 MTR_2g461450 24.397 373 232 14 11 363 4 346 2.64e-12 67.8
MsG0580027961.01.T01 MTR_2g024110 24.074 378 227 17 25 373 4 350 3.36e-12 67.8
MsG0580027961.01.T01 MTR_2g028110 24.933 373 218 19 28 373 7 344 3.81e-12 67.8
MsG0580027961.01.T01 MTR_2g043400 25.291 344 210 14 9 326 7 329 4.69e-12 67.4
MsG0580027961.01.T01 MTR_7g061050 21.944 319 222 7 22 329 10 312 4.93e-12 67.4
MsG0580027961.01.T01 MTR_3g097190 50.000 54 27 0 313 366 28 81 5.17e-12 64.7
MsG0580027961.01.T01 MTR_7g055930 23.389 419 202 16 17 353 6 387 6.33e-12 67.0
MsG0580027961.01.T01 MTR_2g426070 23.514 370 221 16 33 366 14 357 6.39e-12 67.0
MsG0580027961.01.T01 MTR_5g097730 71.795 39 11 0 315 353 15 53 6.41e-12 60.8
MsG0580027961.01.T01 MTR_6g027910 23.632 402 231 19 25 387 9 373 6.54e-12 67.0
MsG0580027961.01.T01 MTR_7g055977 24.650 357 218 12 23 349 5 340 6.62e-12 67.0
MsG0580027961.01.T01 MTR_4g109280 24.934 381 224 15 28 387 11 350 6.95e-12 66.6
MsG0580027961.01.T01 MTR_1g061330 23.529 374 246 14 28 387 7 354 9.24e-12 66.6
MsG0580027961.01.T01 MTR_1g054725 23.901 364 212 14 10 352 8 327 9.27e-12 66.2
MsG0580027961.01.T01 MTR_3g058470 30.846 201 114 8 28 211 40 232 9.97e-12 66.2
MsG0580027961.01.T01 MTR_3g436150 26.032 315 201 11 28 328 35 331 1.01e-11 66.2
MsG0580027961.01.T01 MTR_1g055195 26.545 275 176 11 120 387 214 469 1.35e-11 66.2
MsG0580027961.01.T01 MTR_5g057690 22.941 340 207 13 28 357 49 343 1.37e-11 65.9
MsG0580027961.01.T01 MTR_7g050480 23.547 344 208 13 5 325 2 313 1.49e-11 65.9
MsG0580027961.01.T01 MTR_3g007360 24.762 315 182 15 33 328 60 338 1.79e-11 65.9
MsG0580027961.01.T01 MTR_8g013010 27.386 241 130 9 21 241 50 265 1.83e-11 65.1
MsG0580027961.01.T01 MTR_3g024110 24.047 341 204 15 28 356 104 401 2.14e-11 65.5
MsG0580027961.01.T01 MTR_2g031640 23.120 359 222 15 28 363 9 336 2.23e-11 65.5
MsG0580027961.01.T01 MTR_0267s0050 22.165 388 229 15 33 376 14 372 2.28e-11 65.5
MsG0580027961.01.T01 MTR_7g055870 22.947 414 210 15 17 353 6 387 2.46e-11 65.5
MsG0580027961.01.T01 MTR_3g009310 24.679 312 196 11 28 329 45 327 2.51e-11 65.1
MsG0580027961.01.T01 MTR_7g007300 25.073 343 209 16 28 357 106 413 2.83e-11 65.1
MsG0580027961.01.T01 MTR_4g023190 25.000 364 223 16 38 387 23 350 3.05e-11 64.7
MsG0580027961.01.T01 MTR_4g129190 22.222 342 191 13 27 329 8 313 3.39e-11 64.7
MsG0580027961.01.T01 MTR_7g056710 25.157 318 186 12 33 329 26 312 3.96e-11 64.7
MsG0580027961.01.T01 MTR_0044s0300 23.684 342 209 14 28 356 41 343 3.96e-11 64.7
MsG0580027961.01.T01 MTR_3g007410 25.078 319 178 14 33 329 60 339 3.99e-11 64.7
MsG0580027961.01.T01 MTR_3g030250 24.281 313 183 12 28 328 40 310 4.18e-11 64.3
MsG0580027961.01.T01 MTR_5g027330 23.249 357 209 15 8 326 13 342 4.44e-11 64.7
MsG0580027961.01.T01 MTR_5g027370 23.249 357 209 15 8 326 2 331 5.87e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027961.01.T01 AT3G06240 24.594 431 244 20 2 382 16 415 1.04e-16 81.6
MsG0580027961.01.T01 AT3G16210 32.447 188 101 9 24 208 4 168 2.96e-16 80.1
MsG0580027961.01.T01 AT3G17490 27.405 343 197 14 24 349 5 312 1.79e-15 77.8
MsG0580027961.01.T01 AT1G24881 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G25055 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G24800 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G25150 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G25150 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G25211 25.000 352 219 15 29 361 33 358 1.13e-12 69.7
MsG0580027961.01.T01 AT1G67450 26.071 280 159 14 27 292 10 255 8.38e-11 63.5
MsG0580027961.01.T01 AT3G21120 24.224 322 200 13 23 325 1 297 9.03e-11 63.5

Find 71 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCAATATCTTCCTATA+TGG 0.154706 5:-71941284 None:intergenic
AGTCATTTGGTGCTATTAAA+TGG 0.173418 5:+71941695 MsG0580027961.01.T01:CDS
GCGGTAGATGTTCATGAAAA+TGG 0.239441 5:-71941012 None:intergenic
ATAGTTTAAGAAGTAATTCT+TGG 0.264187 5:+71941438 MsG0580027961.01.T01:CDS
AATCGCTTGAAAGATTTAAT+AGG 0.281695 5:-71940948 None:intergenic
TACAATTCACATTTCAATCT+TGG 0.288955 5:+71941754 MsG0580027961.01.T01:CDS
TTCAGCACTGTCAAGTCATT+TGG 0.320160 5:+71941682 MsG0580027961.01.T01:CDS
CGCTGGTCTAACTTGATACT+TGG 0.326513 5:-71941170 None:intergenic
CACCAAGGTCCTCCATCATT+TGG 0.335826 5:-71941922 None:intergenic
TAGTGAGAAGTTTCAGAATA+GGG 0.353697 5:+71941133 MsG0580027961.01.T01:CDS
TATGTTTCTCATCGTAAGTT+TGG 0.354346 5:+71941335 MsG0580027961.01.T01:CDS
ATAGATTTATCCTGGTAATA+AGG 0.354739 5:-71941059 None:intergenic
CTAGTGAGAAGTTTCAGAAT+AGG 0.385143 5:+71941132 MsG0580027961.01.T01:CDS
ACAATTCACATTTCAATCTT+GGG 0.385408 5:+71941755 MsG0580027961.01.T01:CDS
ACCAAGGTCCTCCATCATTT+GGG 0.410615 5:-71941921 None:intergenic
TGGACTAAATTCTTCGTTGT+AGG 0.413716 5:+71941800 MsG0580027961.01.T01:CDS
ACCCTTCTTTCCTGCTCCGA+TGG 0.415040 5:-71941846 None:intergenic
ATTTCAATCTTGGGTGAACT+TGG 0.415705 5:+71941764 MsG0580027961.01.T01:CDS
ACTTCAATATCTTCCTATAT+GGG 0.417180 5:-71941283 None:intergenic
GTCATTTGGTGCTATTAAAT+GGG 0.423930 5:+71941696 MsG0580027961.01.T01:CDS
ATTAAATGGGTATATTGCTC+TGG 0.431181 5:+71941709 MsG0580027961.01.T01:CDS
ACCTAGTATTATTCTTTCGC+TGG 0.431900 5:-71941187 None:intergenic
CGGTAGATGTTCATGAAAAT+GGG 0.434157 5:-71941011 None:intergenic
ATCAACTGTGTTTGAGGGTG+TGG 0.434552 5:-71941645 None:intergenic
AAGATAATCAACTGTGTTTG+AGG 0.448232 5:-71941651 None:intergenic
CCCTTCTTTCCTGCTCCGAT+GGG 0.451234 5:-71941845 None:intergenic
AATGCTGCTTGTCATTTGAC+TGG 0.460212 5:+71941597 MsG0580027961.01.T01:CDS
CTTTACTATCCCATCGGAGC+AGG 0.464250 5:+71941836 MsG0580027961.01.T01:CDS
AGAATAGGGTCAAATTAGAA+TGG 0.466775 5:+71941147 MsG0580027961.01.T01:CDS
GTGTACTGTGGAACCCATAT+AGG 0.477868 5:+71941270 MsG0580027961.01.T01:CDS
ACATGGATGGACTCTCTCAC+TGG 0.479010 5:+71941534 MsG0580027961.01.T01:CDS
AGAAAGACGGCAGACTAGTC+TGG 0.479394 5:+71941885 MsG0580027961.01.T01:CDS
GAAATGTGAATTGTAGTTGT+TGG 0.481284 5:-71941746 None:intergenic
ACATAGAAATTTAAATCATG+TGG 0.485258 5:+71941088 MsG0580027961.01.T01:CDS
CTTGGGTGAACTTGGTGTAA+AGG 0.486647 5:+71941772 MsG0580027961.01.T01:CDS
AACTTGGTGTAAAGGAATCA+TGG 0.496239 5:+71941780 MsG0580027961.01.T01:CDS
TCCCATCGGAGCAGGAAAGA+AGG 0.499681 5:+71941844 MsG0580027961.01.T01:CDS
TTGAATGCGTATGTAAATCA+TGG 0.505647 5:+71940970 MsG0580027961.01.T01:CDS
CTTCCATGTATATGTTCCTA+AGG 0.506640 5:-71941411 None:intergenic
CGACTTAAATACCCAAATGA+TGG 0.513304 5:+71941910 MsG0580027961.01.T01:CDS
GTAAGAGAATAGATTTATCC+TGG 0.525904 5:-71941067 None:intergenic
ACCAGCGAAAGAATAATACT+AGG 0.527712 5:+71941186 MsG0580027961.01.T01:CDS
CTTTATAGTCGTCGTTAACA+TGG 0.532765 5:-71941364 None:intergenic
AACTCGCGTCTGTAGAGGTA+AGG 0.533211 5:+71940874 MsG0580027961.01.T01:CDS
AGATAATCAACTGTGTTTGA+GGG 0.538166 5:-71941650 None:intergenic
CCGATGGGATAGTAAAGGTA+AGG 0.549124 5:-71941830 None:intergenic
CCCATCGGAGCAGGAAAGAA+GGG 0.556157 5:+71941845 MsG0580027961.01.T01:CDS
GGATAGTAAAGGTAAGGTAA+TGG 0.556956 5:-71941824 None:intergenic
CCTTACCTTTACTATCCCAT+CGG 0.558245 5:+71941830 MsG0580027961.01.T01:CDS
CATAGAAATTTAAATCATGT+GGG 0.574327 5:+71941089 MsG0580027961.01.T01:CDS
CCGCAAGACTTTCTTAACAA+AGG 0.574396 5:+71941031 MsG0580027961.01.T01:CDS
TGTATAGCTAAAACACATGA+AGG 0.574592 5:+71941560 MsG0580027961.01.T01:CDS
ACAGAAACTCGCGTCTGTAG+AGG 0.578520 5:+71940869 MsG0580027961.01.T01:CDS
CTGCTCCGATGGGATAGTAA+AGG 0.578747 5:-71941835 None:intergenic
ACTCCTTAGGAACATATACA+TGG 0.582867 5:+71941408 MsG0580027961.01.T01:CDS
ATATTGAAGTGCATTTCACC+TGG 0.586004 5:+71941296 MsG0580027961.01.T01:CDS
ATCTTGTTCATGAAGAAAGA+CGG 0.594050 5:+71941872 MsG0580027961.01.T01:CDS
ACCCAAATGATGGAGGACCT+TGG 0.598884 5:+71941920 MsG0580027961.01.T01:CDS
AAAGGATCATCCTTATTACC+AGG 0.601465 5:+71941049 MsG0580027961.01.T01:CDS
TCAACTGTGTTTGAGGGTGT+GGG 0.606277 5:-71941644 None:intergenic
GACCTTGGTGTTATAAGCAA+CGG 0.607014 5:+71941935 MsG0580027961.01.T01:CDS
GTCATTTGACTGGAGCAAAG+AGG 0.608487 5:+71941607 MsG0580027961.01.T01:CDS
ATGACAAGCAGCATTCTCCA+TGG 0.611505 5:-71941589 None:intergenic
AAATGGGATCATCAAACAAG+AGG 0.614973 5:-71940995 None:intergenic
AATGGGATCATCAAACAAGA+GGG 0.625751 5:-71940994 None:intergenic
CTTAAATACCCAAATGATGG+AGG 0.628335 5:+71941913 MsG0580027961.01.T01:CDS
ACACATGAAGGTGTAAACCA+TGG 0.643234 5:+71941572 MsG0580027961.01.T01:CDS
ATAAATGTAATAGTGTACTG+TGG 0.678275 5:+71941258 MsG0580027961.01.T01:CDS
CAGACAAAGAGTTCCATGAG+CGG 0.691549 5:-71941225 None:intergenic
GTCCGTTGCTTATAACACCA+AGG 0.697079 5:-71941937 None:intergenic
CCTTTGTTAAGAAAGTCTTG+CGG 0.733483 5:-71941031 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACATAAAAATCATTTCTA+GGG - Chr5:71941322-71941341 None:intergenic 15.0%
!!! AATACTAGGTTTAATATTTT+AGG + Chr5:71941200-71941219 MsG0580027961.01.T01:CDS 15.0%
!!! ATTTAATAGGTAATTTTAAG+AGG - Chr5:71940938-71940957 None:intergenic 15.0%
!! ACATAGAAATTTAAATCATG+TGG + Chr5:71941088-71941107 MsG0580027961.01.T01:CDS 20.0%
!! ATAGTTTAAGAAGTAATTCT+TGG + Chr5:71941438-71941457 MsG0580027961.01.T01:CDS 20.0%
!! CATAGAAATTTAAATCATGT+GGG + Chr5:71941089-71941108 MsG0580027961.01.T01:CDS 20.0%
!! GAAACATAAAAATCATTTCT+AGG - Chr5:71941323-71941342 None:intergenic 20.0%
! AATCGCTTGAAAGATTTAAT+AGG - Chr5:71940951-71940970 None:intergenic 25.0%
! ACAATTCACATTTCAATCTT+GGG + Chr5:71941755-71941774 MsG0580027961.01.T01:CDS 25.0%
! ACTTCAATATCTTCCTATAT+GGG - Chr5:71941286-71941305 None:intergenic 25.0%
! ATAAATGTAATAGTGTACTG+TGG + Chr5:71941258-71941277 MsG0580027961.01.T01:CDS 25.0%
! ATAGATTTATCCTGGTAATA+AGG - Chr5:71941062-71941081 None:intergenic 25.0%
! TACAATTCACATTTCAATCT+TGG + Chr5:71941754-71941773 MsG0580027961.01.T01:CDS 25.0%
!! TAAATACTTTTCACTTCAGA+TGG - Chr5:71942001-71942020 None:intergenic 25.0%
!!! AATAGGTAATTTTAAGAGGA+TGG - Chr5:71940934-71940953 None:intergenic 25.0%
AAGATAATCAACTGTGTTTG+AGG - Chr5:71941654-71941673 None:intergenic 30.0%
AATCAAAAATGGTACATGGA+TGG + Chr5:71941521-71941540 MsG0580027961.01.T01:CDS 30.0%
AGAATAGGGTCAAATTAGAA+TGG + Chr5:71941147-71941166 MsG0580027961.01.T01:CDS 30.0%
AGATAATCAACTGTGTTTGA+GGG - Chr5:71941653-71941672 None:intergenic 30.0%
ATCTTGTTCATGAAGAAAGA+CGG + Chr5:71941872-71941891 MsG0580027961.01.T01:CDS 30.0%
ATTAAATGGGTATATTGCTC+TGG + Chr5:71941709-71941728 MsG0580027961.01.T01:CDS 30.0%
CACTTCAATATCTTCCTATA+TGG - Chr5:71941287-71941306 None:intergenic 30.0%
CTTGTTGAAAAATACTCCTT+AGG + Chr5:71941395-71941414 MsG0580027961.01.T01:CDS 30.0%
GAAATGTGAATTGTAGTTGT+TGG - Chr5:71941749-71941768 None:intergenic 30.0%
GTAAGAGAATAGATTTATCC+TGG - Chr5:71941070-71941089 None:intergenic 30.0%
TAGCAATCAAAAATGGTACA+TGG + Chr5:71941517-71941536 MsG0580027961.01.T01:CDS 30.0%
TAGTGAGAAGTTTCAGAATA+GGG + Chr5:71941133-71941152 MsG0580027961.01.T01:CDS 30.0%
TATGTTTCTCATCGTAAGTT+TGG + Chr5:71941335-71941354 MsG0580027961.01.T01:CDS 30.0%
TGTATAGCTAAAACACATGA+AGG + Chr5:71941560-71941579 MsG0580027961.01.T01:CDS 30.0%
TTGAATGCGTATGTAAATCA+TGG + Chr5:71940970-71940989 MsG0580027961.01.T01:CDS 30.0%
!! AGTCATTTGGTGCTATTAAA+TGG + Chr5:71941695-71941714 MsG0580027961.01.T01:CDS 30.0%
!! GTCATTTGGTGCTATTAAAT+GGG + Chr5:71941696-71941715 MsG0580027961.01.T01:CDS 30.0%
!!! CTAAGGAGTATTTTTCAACA+AGG - Chr5:71941397-71941416 None:intergenic 30.0%
AAAGGATCATCCTTATTACC+AGG + Chr5:71941049-71941068 MsG0580027961.01.T01:CDS 35.0%
AAATGGGATCATCAAACAAG+AGG - Chr5:71940998-71941017 None:intergenic 35.0%
AATGGGATCATCAAACAAGA+GGG - Chr5:71940997-71941016 None:intergenic 35.0%
ACCAGCGAAAGAATAATACT+AGG + Chr5:71941186-71941205 MsG0580027961.01.T01:CDS 35.0%
ACCTAGTATTATTCTTTCGC+TGG - Chr5:71941190-71941209 None:intergenic 35.0%
ACTCCTTAGGAACATATACA+TGG + Chr5:71941408-71941427 MsG0580027961.01.T01:CDS 35.0%
ATATTGAAGTGCATTTCACC+TGG + Chr5:71941296-71941315 MsG0580027961.01.T01:CDS 35.0%
ATTTCAATCTTGGGTGAACT+TGG + Chr5:71941764-71941783 MsG0580027961.01.T01:CDS 35.0%
CCTTTGTTAAGAAAGTCTTG+CGG - Chr5:71941034-71941053 None:intergenic 35.0%
CGACTTAAATACCCAAATGA+TGG + Chr5:71941910-71941929 MsG0580027961.01.T01:CDS 35.0%
CGGTAGATGTTCATGAAAAT+GGG - Chr5:71941014-71941033 None:intergenic 35.0%
CTAGTGAGAAGTTTCAGAAT+AGG + Chr5:71941132-71941151 MsG0580027961.01.T01:CDS 35.0%
CTTAAATACCCAAATGATGG+AGG + Chr5:71941913-71941932 MsG0580027961.01.T01:CDS 35.0%
CTTCCATGTATATGTTCCTA+AGG - Chr5:71941414-71941433 None:intergenic 35.0%
CTTTATAGTCGTCGTTAACA+TGG - Chr5:71941367-71941386 None:intergenic 35.0%
GGATAGTAAAGGTAAGGTAA+TGG - Chr5:71941827-71941846 None:intergenic 35.0%
TGGACTAAATTCTTCGTTGT+AGG + Chr5:71941800-71941819 MsG0580027961.01.T01:CDS 35.0%
TTAGCGCTAGCAATCAAAAA+TGG + Chr5:71941510-71941529 MsG0580027961.01.T01:CDS 35.0%
!! AACTTGGTGTAAAGGAATCA+TGG + Chr5:71941780-71941799 MsG0580027961.01.T01:CDS 35.0%
!! TAAAAATCATTTCTAGGGCC+AGG - Chr5:71941317-71941336 None:intergenic 35.0%
CCGCAAGACTTTCTTAACAA+AGG + Chr5:71941031-71941050 MsG0580027961.01.T01:CDS 40.0%
CCTTACCTTTACTATCCCAT+CGG + Chr5:71941830-71941849 MsG0580027961.01.T01:CDS 40.0%
GCGGTAGATGTTCATGAAAA+TGG - Chr5:71941015-71941034 None:intergenic 40.0%
TTCAGCACTGTCAAGTCATT+TGG + Chr5:71941682-71941701 MsG0580027961.01.T01:CDS 40.0%
! AATGCTGCTTGTCATTTGAC+TGG + Chr5:71941597-71941616 MsG0580027961.01.T01:CDS 40.0%
! ACACATGAAGGTGTAAACCA+TGG + Chr5:71941572-71941591 MsG0580027961.01.T01:CDS 40.0%
!! AATATTTTAGGCTCCGCTCA+TGG + Chr5:71941212-71941231 MsG0580027961.01.T01:CDS 40.0%
!! GACCTTGGTGTTATAAGCAA+CGG + Chr5:71941935-71941954 MsG0580027961.01.T01:CDS 40.0%
ACCAAGGTCCTCCATCATTT+GGG - Chr5:71941924-71941943 None:intergenic 45.0%
ATCAACTGTGTTTGAGGGTG+TGG - Chr5:71941648-71941667 None:intergenic 45.0%
ATGACAAGCAGCATTCTCCA+TGG - Chr5:71941592-71941611 None:intergenic 45.0%
CAGACAAAGAGTTCCATGAG+CGG - Chr5:71941228-71941247 None:intergenic 45.0%
CCGATGGGATAGTAAAGGTA+AGG - Chr5:71941833-71941852 None:intergenic 45.0%
GTCATTTGACTGGAGCAAAG+AGG + Chr5:71941607-71941626 MsG0580027961.01.T01:CDS 45.0%
GTCCGTTGCTTATAACACCA+AGG - Chr5:71941940-71941959 None:intergenic 45.0%
GTGTACTGTGGAACCCATAT+AGG + Chr5:71941270-71941289 MsG0580027961.01.T01:CDS 45.0%
! CGCTGGTCTAACTTGATACT+TGG - Chr5:71941173-71941192 None:intergenic 45.0%
! TCAACTGTGTTTGAGGGTGT+GGG - Chr5:71941647-71941666 None:intergenic 45.0%
!! CTTGGGTGAACTTGGTGTAA+AGG + Chr5:71941772-71941791 MsG0580027961.01.T01:CDS 45.0%
AACTCGCGTCTGTAGAGGTA+AGG + Chr5:71940874-71940893 MsG0580027961.01.T01:CDS 50.0%
ACAGAAACTCGCGTCTGTAG+AGG + Chr5:71940869-71940888 MsG0580027961.01.T01:CDS 50.0%
CACCAAGGTCCTCCATCATT+TGG - Chr5:71941925-71941944 None:intergenic 50.0%
CTGCTCCGATGGGATAGTAA+AGG - Chr5:71941838-71941857 None:intergenic 50.0%
CTTTACTATCCCATCGGAGC+AGG + Chr5:71941836-71941855 MsG0580027961.01.T01:CDS 50.0%
! ACATGGATGGACTCTCTCAC+TGG + Chr5:71941534-71941553 MsG0580027961.01.T01:CDS 50.0%
! ACCCAAATGATGGAGGACCT+TGG + Chr5:71941920-71941939 MsG0580027961.01.T01:CDS 50.0%
! AGAAAGACGGCAGACTAGTC+TGG + Chr5:71941885-71941904 MsG0580027961.01.T01:CDS 50.0%
ACCCTTCTTTCCTGCTCCGA+TGG - Chr5:71941849-71941868 None:intergenic 55.0%
CCCATCGGAGCAGGAAAGAA+GGG + Chr5:71941845-71941864 MsG0580027961.01.T01:CDS 55.0%
CCCTTCTTTCCTGCTCCGAT+GGG - Chr5:71941848-71941867 None:intergenic 55.0%
TCCCATCGGAGCAGGAAAGA+AGG + Chr5:71941844-71941863 MsG0580027961.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 71940837 71942021 71940837 ID=MsG0580027961.01;Name=MsG0580027961.01
Chr5 mRNA 71940837 71942021 71940837 ID=MsG0580027961.01.T01;Parent=MsG0580027961.01;Name=MsG0580027961.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|394
Chr5 exon 71940837 71942021 71940837 ID=MsG0580027961.01.T01:exon:4564;Parent=MsG0580027961.01.T01
Chr5 CDS 71940837 71942021 71940837 ID=MsG0580027961.01.T01:cds;Parent=MsG0580027961.01.T01
Gene Sequence

>MsG0580027961.01.T01

ATGAAGAAAGAGCAGCTGCAGAAGAAGAAGAAACAGAAACTCGCGTCTGTAGAGGTAAGGAAACAACTATATGTACATGATGATATTGCTTTCTCCATCCTCTTAAAATTACCTATTAAATCTTTCAAGCGATTTGAATGCGTATGTAAATCATGGTCCCTCTTGTTTGATGATCCCATTTTCATGAACATCTACCGCAAGACTTTCTTAACAAAGGATCATCCTTATTACCAGGATAAATCTATTCTCTTACATAGAAATTTAAATCATGTGGGCTATGAGTTTTATTCTCTTTCTAGTGAGAAGTTTCAGAATAGGGTCAAATTAGAATGGCCAAGTATCAAGTTAGACCAGCGAAAGAATAATACTAGGTTTAATATTTTAGGCTCCGCTCATGGAACTCTTTGTCTGCTTTCTAGAAATAAATGTAATAGTGTACTGTGGAACCCATATAGGAAGATATTGAAGTGCATTTCACCTGGCCCTAGAAATGATTTTTATGTTTCTCATCGTAAGTTTGGTTATGACCATGTTAACGACGACTATAAAGTGTTGTGCCTTGTTGAAAAATACTCCTTAGGAACATATACATGGAAGATATATAGTTTAAGAAGTAATTCTTGGAGAAAACTTGATGTTGATGACAATATGCATAATTTATATTTTAAAGAAATTAGCGCTAGCAATCAAAAATGGTACATGGATGGACTCTCTCACTGGCTGTGTATAGCTAAAACACATGAAGGTGTAAACCATGGAGAATGCTGCTTGTCATTTGACTGGAGCAAAGAGGTTTTCATTATAACACCCACACCCTCAAACACAGTTGATTATCTTTCTATTTCTTCAGCACTGTCAAGTCATTTGGTGCTATTAAATGGGTATATTGCTCTGGTTGTAGTTTACAAACCAACAACTACAATTCACATTTCAATCTTGGGTGAACTTGGTGTAAAGGAATCATGGACTAAATTCTTCGTTGTAGGACCATTACCTTACCTTTACTATCCCATCGGAGCAGGAAAGAAGGGTGATATCTTGTTCATGAAGAAAGACGGCAGACTAGTCTGGTTCGACTTAAATACCCAAATGATGGAGGACCTTGGTGTTATAAGCAACGGACTTCGTTGTCAAATAGTAATTCATAAAGAAAGCTTTCTTCCATCTGAAGTGAAAAGTATTTAA
Protein sequence

>MsG0580027961.01.T01

MKKEQLQKKKKQKLASVEVRKQLYVHDDIAFSILLKLPIKSFKRFECVCKSWSLLFDDPIFMNIYRKTFLTKDHPYYQDKSILLHRNLNHVGYEFYSLSSEKFQNRVKLEWPSIKLDQRKNNTRFNILGSAHGTLCLLSRNKCNSVLWNPYRKILKCISPGPRNDFYVSHRKFGYDHVNDDYKVLCLVEKYSLGTYTWKIYSLRSNSWRKLDVDDNMHNLYFKEISASNQKWYMDGLSHWLCIAKTHEGVNHGECCLSFDWSKEVFIITPTPSNTVDYLSISSALSSHLVLLNGYIALVVVYKPTTTIHISILGELGVKESWTKFFVVGPLPYLYYPIGAGKKGDILFMKKDGRLVWFDLNTQMMEDLGVISNGLRCQIVIHKESFLPSEVKSI*