AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007462.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007462.01.T01 MTR_2g024110 58.182 385 136 9 1 370 1 375 2.63e-139 402
MsG0280007462.01.T01 MTR_4g006270 55.670 388 144 10 1 377 1 371 1.02e-136 396
MsG0280007462.01.T01 MTR_2g026010 59.091 396 115 13 1 372 1 373 2.21e-136 395
MsG0280007462.01.T01 MTR_2g031640 53.769 398 139 11 4 379 6 380 8.83e-129 375
MsG0280007462.01.T01 MTR_2g031720 52.956 406 143 13 1 380 1 384 1.75e-126 370
MsG0280007462.01.T01 MTR_2g031680 53.535 396 141 11 4 380 6 377 5.13e-124 363
MsG0280007462.01.T01 MTR_2g028110 52.393 397 139 10 1 373 1 371 2.37e-123 361
MsG0280007462.01.T01 MTR_1g068835 52.956 389 142 10 1 370 1 367 2.42e-123 361
MsG0280007462.01.T01 MTR_1g068875 54.103 390 133 11 1 372 1 362 1.35e-119 352
MsG0280007462.01.T01 MTR_2g425980 50.244 410 144 12 2 373 3 390 5.25e-118 348
MsG0280007462.01.T01 MTR_2g426090 48.515 404 147 12 7 373 9 388 4.62e-116 343
MsG0280007462.01.T01 MTR_1g068860 52.658 395 136 13 1 373 1 366 1.36e-114 338
MsG0280007462.01.T01 MTR_0667s0010 49.500 400 157 12 4 373 6 390 2.19e-114 339
MsG0280007462.01.T01 MTR_2g028130 49.034 414 156 12 2 374 3 402 5.00e-114 338
MsG0280007462.01.T01 MTR_8g099460 50.246 406 151 12 2 379 3 385 5.08e-114 338
MsG0280007462.01.T01 MTR_2g426020 49.136 405 151 13 4 373 6 390 3.40e-112 333
MsG0280007462.01.T01 MTR_2g426070 47.837 416 153 13 5 380 7 398 2.23e-111 331
MsG0280007462.01.T01 MTR_2g025420 49.165 419 145 13 4 373 6 405 1.05e-110 330
MsG0280007462.01.T01 MTR_3g083010 47.183 426 166 14 1 379 1 414 2.01e-108 324
MsG0280007462.01.T01 MTR_2g426060 49.161 417 147 15 4 380 6 397 1.68e-107 322
MsG0280007462.01.T01 MTR_2g024100 48.737 396 151 13 19 379 22 400 1.45e-103 311
MsG0280007462.01.T01 MTR_2g021050 46.154 416 148 13 2 380 3 379 1.16e-100 303
MsG0280007462.01.T01 MTR_2g028140 44.630 419 164 12 2 374 3 399 7.95e-98 297
MsG0280007462.01.T01 MTR_2g028160 43.961 414 177 10 2 373 3 403 2.84e-97 296
MsG0280007462.01.T01 MTR_4g070550 44.862 399 159 12 2 359 3 381 1.01e-89 276
MsG0280007462.01.T01 MTR_4g133170 41.878 394 184 10 1 373 1 370 5.91e-84 261
MsG0280007462.01.T01 MTR_1g068905 43.896 385 122 12 1 371 1 305 4.71e-80 248
MsG0280007462.01.T01 MTR_5g083940 47.953 342 107 9 1 340 1 273 7.63e-80 248
MsG0280007462.01.T01 MTR_2g031700 57.826 230 81 6 4 219 6 233 5.61e-78 242
MsG0280007462.01.T01 MTR_2g031700 56.140 57 24 1 323 379 234 289 4.77e-12 66.6
MsG0280007462.01.T01 MTR_2g025960 45.426 317 130 10 83 373 1 300 1.12e-77 242
MsG0280007462.01.T01 MTR_2g040050 41.987 312 96 9 1 298 1 241 9.00e-60 194
MsG0280007462.01.T01 MTR_3g086960 61.905 168 47 5 197 362 1 153 4.21e-54 176
MsG0280007462.01.T01 MTR_2g022170 66.667 126 38 2 1 123 1 125 2.55e-47 157
MsG0280007462.01.T01 MTR_2g037520 53.179 173 61 5 185 351 1 159 1.56e-45 154
MsG0280007462.01.T01 MTR_3g086970 49.744 195 69 6 1 192 1 169 1.11e-43 149
MsG0280007462.01.T01 MTR_1g097560 27.371 369 225 12 4 359 36 374 1.54e-35 134
MsG0280007462.01.T01 MTR_2g021190 32.776 299 165 12 4 279 21 306 3.77e-35 133
MsG0280007462.01.T01 MTR_2g025440 49.286 140 56 3 234 373 1 125 6.25e-35 128
MsG0280007462.01.T01 MTR_2g046920 30.990 384 203 18 4 359 24 373 2.71e-34 130
MsG0280007462.01.T01 MTR_7g110360 47.929 169 68 4 1 150 36 203 3.00e-34 129
MsG0280007462.01.T01 MTR_7g110360 47.328 131 58 2 230 360 200 319 9.70e-29 114
MsG0280007462.01.T01 MTR_2g046900 31.458 391 200 19 4 359 28 385 1.23e-32 126
MsG0280007462.01.T01 MTR_7g013590 31.879 298 168 12 7 281 39 324 3.70e-32 125
MsG0280007462.01.T01 MTR_3g010390 31.233 365 202 12 1 334 30 376 6.25e-32 124
MsG0280007462.01.T01 MTR_2g046830 30.997 371 193 17 4 345 25 361 1.41e-31 124
MsG0280007462.01.T01 MTR_3g007330 30.667 300 172 8 1 281 45 327 2.21e-30 120
MsG0280007462.01.T01 MTR_3g006670 31.908 304 165 9 4 281 49 336 2.42e-30 120
MsG0280007462.01.T01 MTR_5g046300 28.012 332 194 15 1 310 1 309 3.18e-30 119
MsG0280007462.01.T01 MTR_5g046290 28.012 332 194 15 1 310 1 309 3.18e-30 119
MsG0280007462.01.T01 MTR_2g021150 30.519 308 167 11 4 281 14 304 6.60e-30 118
MsG0280007462.01.T01 MTR_7g407070 28.882 322 175 10 1 281 29 337 1.27e-29 118
MsG0280007462.01.T01 MTR_5g057710 29.703 303 170 9 4 281 46 330 2.98e-29 117
MsG0280007462.01.T01 MTR_6g065980 29.310 290 174 11 4 281 16 286 3.25e-29 116
MsG0280007462.01.T01 MTR_0044s0300 27.273 385 225 15 1 359 35 390 7.45e-29 116
MsG0280007462.01.T01 MTR_2g029990 30.405 296 174 10 5 279 52 336 1.11e-28 115
MsG0280007462.01.T01 MTR_4g061340 29.126 309 175 10 1 281 23 315 1.21e-28 115
MsG0280007462.01.T01 MTR_2g047832 28.351 388 193 18 4 341 29 381 1.29e-28 115
MsG0280007462.01.T01 MTR_3g009310 29.275 345 200 12 1 320 39 364 2.11e-28 115
MsG0280007462.01.T01 MTR_3g024130 29.876 241 145 4 82 312 55 281 2.22e-28 113
MsG0280007462.01.T01 MTR_3g083640 30.678 339 176 15 1 308 52 362 3.30e-28 114
MsG0280007462.01.T01 MTR_3g014540 29.605 304 171 13 4 281 29 315 3.39e-28 114
MsG0280007462.01.T01 MTR_3g006570 29.563 389 215 19 1 359 18 377 6.32e-28 113
MsG0280007462.01.T01 MTR_3g030250 27.179 390 210 16 1 359 34 380 9.10e-28 112
MsG0280007462.01.T01 MTR_1g097490 29.915 351 208 13 4 335 49 380 9.21e-28 113
MsG0280007462.01.T01 MTR_3g007360 30.537 298 170 9 7 281 55 338 1.15e-27 113
MsG0280007462.01.T01 MTR_5g057790 29.934 304 168 10 4 281 46 330 1.35e-27 112
MsG0280007462.01.T01 MTR_3g010590 27.865 384 219 17 1 359 36 386 1.83e-27 112
MsG0280007462.01.T01 MTR_3g007410 30.537 298 170 9 7 281 55 338 1.83e-27 112
MsG0280007462.01.T01 MTR_3g013740 29.022 317 168 12 4 281 44 342 1.90e-27 112
MsG0280007462.01.T01 MTR_2g078900 30.931 333 189 15 4 313 33 347 4.04e-27 110
MsG0280007462.01.T01 MTR_3g036430 29.041 365 215 15 1 359 17 343 5.03e-27 110
MsG0280007462.01.T01 MTR_1g097330 30.422 332 194 14 4 315 16 330 1.34e-26 110
MsG0280007462.01.T01 MTR_4g031770 27.411 394 226 13 1 359 1 369 1.41e-26 109
MsG0280007462.01.T01 MTR_6g053240 29.412 391 205 17 1 352 25 383 1.68e-26 109
MsG0280007462.01.T01 MTR_3g010920 26.804 388 209 17 1 359 41 382 1.75e-26 109
MsG0280007462.01.T01 MTR_7g007300 28.462 390 199 17 4 359 103 446 1.91e-26 110
MsG0280007462.01.T01 MTR_3g014570 26.822 343 204 12 1 315 26 349 2.28e-26 108
MsG0280007462.01.T01 MTR_3g007270 29.618 314 168 10 4 281 47 343 3.26e-26 108
MsG0280007462.01.T01 MTR_3g058470 29.769 346 161 14 1 311 34 332 5.09e-26 107
MsG0280007462.01.T01 MTR_5g022420 27.273 330 202 8 4 314 27 337 6.79e-26 107
MsG0280007462.01.T01 MTR_4g107820 28.852 305 175 12 2 283 34 319 1.60e-25 106
MsG0280007462.01.T01 MTR_4g107780 28.852 305 175 12 2 283 34 319 1.60e-25 106
MsG0280007462.01.T01 MTR_5g011200 27.949 390 216 16 4 359 17 375 1.64e-25 106
MsG0280007462.01.T01 MTR_5g057690 29.000 300 166 10 4 281 46 320 1.87e-25 106
MsG0280007462.01.T01 MTR_4g107820 28.852 305 175 12 2 283 34 319 2.22e-25 106
MsG0280007462.01.T01 MTR_3g036290 28.000 325 194 9 4 311 22 323 2.23e-25 105
MsG0280007462.01.T01 MTR_3g013770 26.582 316 175 11 1 281 30 323 2.28e-25 106
MsG0280007462.01.T01 MTR_4g107780 28.852 305 175 12 2 283 34 319 2.50e-25 106
MsG0280007462.01.T01 MTR_4g055060 29.762 336 188 11 4 308 30 348 2.55e-25 106
MsG0280007462.01.T01 MTR_1g050542 28.920 287 180 8 4 278 58 332 2.60e-25 106
MsG0280007462.01.T01 MTR_3g030240 27.368 380 217 17 1 359 37 378 2.68e-25 105
MsG0280007462.01.T01 MTR_3g009240 30.132 302 166 11 4 281 36 316 6.30e-25 105
MsG0280007462.01.T01 MTR_8g101580 29.236 301 181 10 1 281 42 330 7.76e-25 105
MsG0280007462.01.T01 MTR_2g021155 29.518 332 197 12 4 311 33 351 1.26e-24 106
MsG0280007462.01.T01 MTR_2g021155 31.111 225 128 9 68 279 674 884 3.24e-16 80.9
MsG0280007462.01.T01 MTR_6g053260 28.756 386 209 16 1 352 334 687 1.30e-24 106
MsG0280007462.01.T01 MTR_1g056710 25.000 348 209 13 1 317 31 357 2.50e-24 103
MsG0280007462.01.T01 MTR_1g094210 27.796 313 186 12 4 296 57 349 3.17e-24 103
MsG0280007462.01.T01 MTR_3g036335 26.546 388 224 18 1 363 38 389 3.31e-24 103
MsG0280007462.01.T01 MTR_1g094210 27.796 313 186 12 4 296 57 349 4.40e-24 103
MsG0280007462.01.T01 MTR_3g009300 31.359 287 150 12 7 281 37 288 4.63e-24 102
MsG0280007462.01.T01 MTR_5g046260 27.986 293 159 12 1 281 1 253 5.37e-24 100
MsG0280007462.01.T01 MTR_6g048120 27.431 401 222 17 4 361 36 410 5.83e-24 102
MsG0280007462.01.T01 MTR_3g007300 29.655 290 162 10 1 281 46 302 6.32e-24 102
MsG0280007462.01.T01 MTR_1g054575 27.336 289 184 8 4 278 52 328 9.16e-24 103
MsG0280007462.01.T01 MTR_3g436150 29.206 315 177 13 1 281 29 331 1.02e-23 101
MsG0280007462.01.T01 MTR_6g021880 26.053 380 218 16 15 359 31 382 1.18e-23 101
MsG0280007462.01.T01 MTR_3g007430 30.565 301 165 11 7 281 46 328 1.21e-23 101
MsG0280007462.01.T01 MTR_6g004660 27.742 310 181 13 4 281 16 314 1.29e-23 101
MsG0280007462.01.T01 MTR_3g011100 27.665 394 221 15 4 359 235 602 2.18e-23 102
MsG0280007462.01.T01 MTR_3g010520 27.586 377 211 18 4 359 25 360 2.26e-23 100
MsG0280007462.01.T01 MTR_3g011060 27.457 346 194 13 1 308 25 351 2.46e-23 100
MsG0280007462.01.T01 MTR_3g006500 25.635 394 215 17 4 359 17 370 2.76e-23 100
MsG0280007462.01.T01 MTR_3g024040 28.435 313 195 14 11 311 38 333 2.82e-23 100
MsG0280007462.01.T01 MTR_1g115160 28.421 380 214 21 4 359 22 367 2.94e-23 100
MsG0280007462.01.T01 MTR_3g030350 26.316 304 176 10 4 281 35 316 3.21e-23 100
MsG0280007462.01.T01 MTR_7g110370 57.303 89 31 1 219 307 16 97 4.70e-23 96.7
MsG0280007462.01.T01 MTR_3g030330 25.515 388 222 16 4 359 20 372 5.60e-23 99.4
MsG0280007462.01.T01 MTR_3g024150 25.916 382 221 16 7 359 38 386 6.35e-23 99.4
MsG0280007462.01.T01 MTR_2g021210 30.195 308 150 13 4 279 84 358 6.42e-23 99.8
MsG0280007462.01.T01 MTR_6g013270 28.977 352 204 16 4 325 29 364 6.85e-23 99.4
MsG0280007462.01.T01 MTR_3g024110 25.526 380 233 16 1 359 98 448 9.63e-23 99.8
MsG0280007462.01.T01 MTR_4g108820 26.596 282 168 10 4 281 42 288 1.93e-22 97.1
MsG0280007462.01.T01 MTR_1g054725 27.990 393 216 20 1 359 17 376 2.26e-22 97.8
MsG0280007462.01.T01 MTR_6g004210 26.415 318 168 12 15 281 36 338 3.49e-22 97.8
MsG0280007462.01.T01 MTR_4g030830 27.950 322 174 13 4 281 9 316 3.56e-22 97.4
MsG0280007462.01.T01 MTR_5g057020 27.946 297 168 10 4 281 46 315 3.60e-22 96.7
MsG0280007462.01.T01 MTR_0760s0010 26.216 370 219 13 11 359 54 390 4.00e-22 97.1
MsG0280007462.01.T01 MTR_3g010970 25.916 382 214 18 7 359 51 392 4.20e-22 97.1
MsG0280007462.01.T01 MTR_4g116330 27.946 297 183 9 4 281 23 307 4.25e-22 97.1
MsG0280007462.01.T01 MTR_1g055375 27.431 401 215 22 1 359 1 367 1.02e-21 95.9
MsG0280007462.01.T01 MTR_3g023930 26.596 376 215 18 4 359 34 368 1.09e-21 95.5
MsG0280007462.01.T01 MTR_6g027910 26.000 400 213 21 7 359 12 375 2.11e-21 95.1
MsG0280007462.01.T01 MTR_4g023070 26.513 347 203 14 3 314 2 331 2.31e-21 94.7
MsG0280007462.01.T01 MTR_2g055970 26.586 331 209 13 4 314 211 527 2.77e-21 95.9
MsG0280007462.01.T01 MTR_5g007610 26.433 314 183 9 1 281 38 336 4.49e-21 94.4
MsG0280007462.01.T01 MTR_6g014720 29.200 250 157 10 82 325 111 346 4.77e-21 94.0
MsG0280007462.01.T01 MTR_4g024890 27.673 318 178 16 1 281 7 309 6.12e-21 93.6
MsG0280007462.01.T01 MTR_4g023120 26.513 347 203 15 3 314 2 331 6.72e-21 93.6
MsG0280007462.01.T01 MTR_7g077070 26.531 343 183 15 4 285 16 350 8.44e-21 93.6
MsG0280007462.01.T01 MTR_3g010620 25.945 397 219 18 3 359 32 393 8.95e-21 93.2
MsG0280007462.01.T01 MTR_2g461450 26.531 343 204 12 1 313 15 339 1.88e-20 92.0
MsG0280007462.01.T01 MTR_3g030310 26.645 304 179 10 4 279 21 308 2.95e-20 91.7
MsG0280007462.01.T01 MTR_3g009260 28.716 296 181 8 1 281 38 318 5.35e-20 90.9
MsG0280007462.01.T01 MTR_8g467140 25.763 295 187 10 4 278 32 314 5.80e-20 90.1
MsG0280007462.01.T01 MTR_4g013180 25.697 323 179 11 4 281 11 317 6.45e-20 91.3
MsG0280007462.01.T01 MTR_1g055135 29.245 318 162 14 4 282 13 306 7.17e-20 90.5
MsG0280007462.01.T01 MTR_3g010430 27.020 396 217 15 1 359 33 393 7.48e-20 90.9
MsG0280007462.01.T01 MTR_1g088120 27.020 396 188 18 1 318 1 373 7.71e-20 90.9
MsG0280007462.01.T01 MTR_3g030320 28.421 285 160 14 88 359 46 299 8.08e-20 89.4
MsG0280007462.01.T01 MTR_6g027890 27.401 354 196 15 37 359 2 325 1.16e-19 89.4
MsG0280007462.01.T01 MTR_5g009060 27.976 336 174 12 1 282 22 343 1.17e-19 90.1
MsG0280007462.01.T01 MTR_1g055055 27.457 346 178 14 4 317 26 330 1.18e-19 89.4
MsG0280007462.01.T01 MTR_7g070440 25.826 333 211 13 11 314 14 339 1.41e-19 89.7
MsG0280007462.01.T01 MTR_3g006530 25.163 306 180 9 4 279 40 326 4.34e-19 88.6
MsG0280007462.01.T01 MTR_2g078870 27.419 310 178 16 60 359 36 308 4.76e-19 87.0
MsG0280007462.01.T01 MTR_3g058480 28.794 257 138 10 1 222 36 282 6.85e-19 87.0
MsG0280007462.01.T01 MTR_5g046280 25.214 234 142 11 86 309 1 211 6.92e-19 85.9
MsG0280007462.01.T01 MTR_5g070080 27.273 319 178 12 4 281 10 315 8.37e-19 87.4
MsG0280007462.01.T01 MTR_2g021252 28.116 345 194 15 7 327 50 364 8.44e-19 87.4
MsG0280007462.01.T01 MTR_7g078900 26.176 340 167 14 6 281 14 333 9.77e-19 87.8
MsG0280007462.01.T01 MTR_2g046860 29.368 269 154 13 85 342 7 250 1.08e-18 86.3
MsG0280007462.01.T01 MTR_5g048160 24.924 329 193 10 1 281 1 323 1.39e-18 87.0
MsG0280007462.01.T01 MTR_6g055210 26.346 353 196 15 4 308 22 358 1.82e-18 87.0
MsG0280007462.01.T01 MTR_3g034180 24.684 316 181 10 4 281 123 419 2.16e-18 87.0
MsG0280007462.01.T01 MTR_3g010870 25.197 381 228 16 4 359 37 385 2.39e-18 86.3
MsG0280007462.01.T01 MTR_7g070830 24.198 343 181 13 4 281 21 349 3.19e-18 86.3
MsG0280007462.01.T01 MTR_7g070880 24.198 343 181 13 4 281 21 349 3.38e-18 85.9
MsG0280007462.01.T01 MTR_3g072470 25.000 336 171 12 4 281 19 331 3.68e-18 85.9
MsG0280007462.01.T01 MTR_4g023080 25.850 294 185 10 4 281 9 285 4.56e-18 85.1
MsG0280007462.01.T01 MTR_0115s0020 24.929 353 196 12 1 306 7 337 5.05e-18 85.5
MsG0280007462.01.T01 MTR_7g078840 25.798 376 179 17 4 304 10 360 5.86e-18 85.5
MsG0280007462.01.T01 MTR_4g109270 27.358 318 163 13 2 281 6 293 7.08e-18 84.7
MsG0280007462.01.T01 MTR_7g066840 25.000 348 206 11 4 309 23 357 7.36e-18 84.7
MsG0280007462.01.T01 MTR_7g056290 26.706 337 165 15 4 281 22 335 7.59e-18 85.1
MsG0280007462.01.T01 MTR_4g019990 23.969 388 217 16 2 337 4 365 8.10e-18 84.7
MsG0280007462.01.T01 MTR_8g054320 28.421 285 124 11 1 281 29 237 8.54e-18 83.6
MsG0280007462.01.T01 MTR_4g030090 25.397 378 227 14 2 337 12 376 9.75e-18 84.3
MsG0280007462.01.T01 MTR_0054s0100 24.878 410 207 19 12 345 25 409 1.19e-17 84.3
MsG0280007462.01.T01 MTR_1g115185 26.910 301 182 10 7 283 42 328 1.44e-17 84.0
MsG0280007462.01.T01 MTR_3g058440 28.514 249 139 11 1 218 32 272 1.57e-17 82.8
MsG0280007462.01.T01 MTR_2g046800 27.027 333 169 13 4 281 14 327 2.15e-17 83.6
MsG0280007462.01.T01 MTR_6g016285 24.706 340 190 14 4 293 21 344 2.23e-17 83.6
MsG0280007462.01.T01 MTR_7g056003 25.000 328 170 15 7 281 18 322 2.53e-17 83.2
MsG0280007462.01.T01 MTR_3g034160 25.484 310 186 11 4 281 9 305 2.53e-17 83.2
MsG0280007462.01.T01 MTR_6g007135 23.333 390 240 15 4 359 26 390 3.39e-17 82.8
MsG0280007462.01.T01 MTR_0128s0010 25.989 354 194 14 4 307 21 356 3.65e-17 82.8
MsG0280007462.01.T01 MTR_2g047892 25.312 320 177 13 4 279 22 323 3.66e-17 82.8
MsG0280007462.01.T01 MTR_2g022000 23.902 410 196 18 4 313 16 409 6.52e-17 82.4
MsG0280007462.01.T01 MTR_7g066000 24.814 403 230 17 4 358 25 402 9.26e-17 81.6
MsG0280007462.01.T01 MTR_2g043410 25.455 330 173 13 4 281 22 330 1.11e-16 81.3
MsG0280007462.01.T01 MTR_7g077990 24.571 350 178 16 4 295 17 338 1.21e-16 81.3
MsG0280007462.01.T01 MTR_7g445890 23.684 304 184 12 4 278 16 300 1.25e-16 80.9
MsG0280007462.01.T01 MTR_2g043400 24.699 332 173 12 4 281 23 331 1.26e-16 81.3
MsG0280007462.01.T01 MTR_8g046310 25.074 339 204 13 12 318 24 344 1.28e-16 80.9
MsG0280007462.01.T01 MTR_6g060650 27.707 314 172 13 4 281 8 302 1.53e-16 80.9
MsG0280007462.01.T01 MTR_7g028660 26.301 346 197 15 4 308 11 339 1.87e-16 80.5
MsG0280007462.01.T01 MTR_7g056390 26.409 337 166 16 4 281 18 331 2.05e-16 80.5
MsG0280007462.01.T01 MTR_0054s0090 27.410 332 164 16 12 281 25 341 2.21e-16 80.5
MsG0280007462.01.T01 MTR_4g023090 25.000 296 195 9 4 281 16 302 2.29e-16 80.1
MsG0280007462.01.T01 MTR_2g437190 60.526 76 24 3 46 117 56 129 3.03e-16 76.3
MsG0280007462.01.T01 MTR_3g011020 25.949 316 164 11 1 281 25 305 3.51e-16 79.7
MsG0280007462.01.T01 MTR_7g066100 23.134 402 241 15 4 357 11 392 3.64e-16 79.7
MsG0280007462.01.T01 MTR_7g056820 24.848 330 167 12 4 281 7 307 3.71e-16 79.7
MsG0280007462.01.T01 MTR_4g109280 26.531 294 186 10 4 281 8 287 4.44e-16 79.3
MsG0280007462.01.T01 MTR_4g117780 27.483 302 185 12 1 281 8 296 5.47e-16 79.0
MsG0280007462.01.T01 MTR_1g113900 26.740 273 168 10 92 359 1 246 5.54e-16 77.4
MsG0280007462.01.T01 MTR_2g066200 26.646 319 186 14 4 281 12 323 1.25e-15 78.2
MsG0280007462.01.T01 MTR_6g007150 25.503 298 175 12 83 359 67 338 1.44e-15 77.4
MsG0280007462.01.T01 MTR_8g073550 33.684 190 100 10 4 172 30 214 1.53e-15 75.9
MsG0280007462.01.T01 MTR_5g097210 27.097 310 169 13 4 281 9 293 1.70e-15 77.4
MsG0280007462.01.T01 MTR_4g116330 24.662 296 155 8 4 281 23 268 1.85e-15 77.0
MsG0280007462.01.T01 MTR_7g056710 26.603 312 177 14 4 281 18 311 1.92e-15 77.4
MsG0280007462.01.T01 MTR_3g010440 27.703 296 134 12 1 281 23 253 2.17e-15 77.0
MsG0280007462.01.T01 MTR_5g056990 30.726 179 104 6 108 281 12 175 2.20e-15 75.5
MsG0280007462.01.T01 MTR_8g464770 23.229 353 215 13 4 318 12 346 2.33e-15 77.0
MsG0280007462.01.T01 MTR_7g056570 28.125 320 163 16 4 281 18 312 2.79e-15 77.4
MsG0280007462.01.T01 MTR_7g056737 27.389 314 173 15 4 281 22 316 3.12e-15 77.0
MsG0280007462.01.T01 MTR_4g117770 26.014 296 191 10 4 281 11 296 3.35e-15 76.6
MsG0280007462.01.T01 MTR_4g117810 26.014 296 191 10 4 281 11 296 3.35e-15 76.6
MsG0280007462.01.T01 MTR_7g091630 27.160 324 178 13 4 281 32 343 3.49e-15 77.0
MsG0280007462.01.T01 MTR_3g034130 23.824 319 180 11 4 281 9 305 4.51e-15 76.3
MsG0280007462.01.T01 MTR_1004s0010 25.091 275 170 10 88 359 119 360 4.96e-15 76.3
MsG0280007462.01.T01 MTR_1g112930 26.039 361 193 19 4 325 25 350 5.24e-15 76.3
MsG0280007462.01.T01 MTR_1g442850 24.416 385 210 16 7 334 8 368 5.40e-15 76.3
MsG0280007462.01.T01 MTR_2g021800 23.645 406 199 17 4 311 16 408 7.01e-15 75.9
MsG0280007462.01.T01 MTR_1g114700 25.193 389 235 18 1 359 26 388 7.30e-15 75.9
MsG0280007462.01.T01 MTR_1g057890 28.986 276 151 13 47 317 90 325 7.49e-15 75.5
MsG0280007462.01.T01 MTR_3g013950 26.479 355 197 19 7 311 9 349 7.62e-15 75.9
MsG0280007462.01.T01 MTR_7g061060 25.234 321 178 14 4 281 13 314 7.82e-15 75.9
MsG0280007462.01.T01 MTR_3g023940 24.747 396 213 17 4 359 34 384 1.01e-14 75.5
MsG0280007462.01.T01 MTR_7g060940 25.000 368 176 16 4 308 22 352 1.08e-14 75.5
MsG0280007462.01.T01 MTR_4g011660 26.554 354 181 18 4 295 19 355 1.32e-14 75.1
MsG0280007462.01.T01 MTR_3g006640 23.567 314 165 14 82 357 15 291 1.53e-14 73.9
MsG0280007462.01.T01 MTR_8g064890 25.419 358 189 18 12 318 24 354 1.76e-14 74.7
MsG0280007462.01.T01 MTR_5g070130 25.962 312 180 11 4 281 11 305 1.88e-14 74.7
MsG0280007462.01.T01 MTR_7g055930 24.928 349 174 16 4 281 13 344 1.98e-14 74.7
MsG0280007462.01.T01 MTR_7g055987 26.557 305 165 14 7 275 23 304 2.21e-14 74.3
MsG0280007462.01.T01 MTR_0128s0070 23.580 352 207 15 2 307 20 355 2.39e-14 74.3
MsG0280007462.01.T01 MTR_4g023130 24.823 282 162 9 4 281 9 244 2.69e-14 73.6
MsG0280007462.01.T01 MTR_3g010450 29.224 219 138 9 8 214 1 214 2.81e-14 72.4
MsG0280007462.01.T01 MTR_2g065860 22.928 362 213 17 4 318 12 354 2.96e-14 73.9
MsG0280007462.01.T01 MTR_1g007410 25.455 330 185 14 4 282 22 341 3.34e-14 73.9
MsG0280007462.01.T01 MTR_1g055065 26.351 296 170 13 86 359 19 288 3.47e-14 72.8
MsG0280007462.01.T01 MTR_4g030790 25.000 300 163 13 4 279 19 280 4.20e-14 73.2
MsG0280007462.01.T01 MTR_1g100763 23.795 332 187 14 9 317 3 291 4.66e-14 72.4
MsG0280007462.01.T01 MTR_5g074850 24.352 386 202 19 12 338 43 397 4.88e-14 74.3
MsG0280007462.01.T01 MTR_4g129190 23.460 341 166 15 3 281 5 312 5.09e-14 73.2
MsG0280007462.01.T01 MTR_8g062660 23.323 313 186 13 4 281 22 315 5.17e-14 73.9
MsG0280007462.01.T01 MTR_4g134560 25.581 215 133 8 79 282 165 363 5.51e-14 73.6
MsG0280007462.01.T01 MTR_4g037465 26.543 324 169 14 4 281 21 321 5.62e-14 73.2
MsG0280007462.01.T01 MTR_4g030760 28.846 312 157 17 4 281 73 353 5.66e-14 73.2
MsG0280007462.01.T01 MTR_3g011120 26.101 318 181 13 4 282 14 316 5.69e-14 72.8
MsG0280007462.01.T01 MTR_5g092850 22.113 407 224 17 12 358 24 397 8.07e-14 72.8
MsG0280007462.01.T01 MTR_2g435950 28.270 237 143 10 85 311 46 265 8.43e-14 72.0
MsG0280007462.01.T01 MTR_0267s0050 25.234 321 191 15 1 281 3 314 8.57e-14 72.4
MsG0280007462.01.T01 MTR_4g130330 23.739 337 184 13 2 281 5 325 8.93e-14 72.4
MsG0280007462.01.T01 MTR_2g047200 23.547 327 182 14 4 282 20 326 9.55e-14 72.4
MsG0280007462.01.T01 MTR_0064s0160 25.000 340 176 12 1 281 39 358 9.58e-14 72.8
MsG0280007462.01.T01 MTR_7g067680 27.152 302 163 10 1 279 46 313 1.03e-13 72.4
MsG0280007462.01.T01 MTR_3g013470 23.920 301 162 11 23 281 14 289 1.05e-13 72.0
MsG0280007462.01.T01 MTR_2g034700 25.157 318 176 14 4 281 14 309 1.13e-13 72.0
MsG0280007462.01.T01 MTR_5g057643 30.366 191 104 7 4 172 46 229 1.31e-13 70.9
MsG0280007462.01.T01 MTR_7g017130 25.602 332 178 14 3 281 17 332 1.33e-13 72.0
MsG0280007462.01.T01 MTR_7g055870 24.277 346 180 14 4 281 13 344 1.34e-13 72.0
MsG0280007462.01.T01 MTR_7g017170 25.602 332 178 14 3 281 17 332 1.50e-13 72.0
MsG0280007462.01.T01 MTR_7g066030 22.807 342 194 15 4 293 21 344 1.51e-13 72.0
MsG0280007462.01.T01 MTR_5g068490 26.066 211 139 7 74 281 18 214 1.57e-13 70.9
MsG0280007462.01.T01 MTR_8g013010 26.250 240 139 8 4 214 54 284 1.61e-13 71.2
MsG0280007462.01.T01 MTR_0097s0030 25.161 310 182 13 4 278 14 308 1.93e-13 71.6
MsG0280007462.01.T01 MTR_2g047240 25.161 310 182 13 4 278 14 308 1.93e-13 71.6
MsG0280007462.01.T01 MTR_0128s0020 23.511 319 182 11 4 279 18 317 2.13e-13 71.2
MsG0280007462.01.T01 MTR_7g061050 24.786 351 196 15 4 307 13 342 2.40e-13 71.2
MsG0280007462.01.T01 MTR_3g464500 24.024 333 197 12 2 294 25 341 2.80e-13 71.2
MsG0280007462.01.T01 MTR_4g132560 25.899 278 165 12 100 359 5 259 2.83e-13 69.7
MsG0280007462.01.T01 MTR_4g116340 31.111 225 125 12 4 210 36 248 2.99e-13 69.3
MsG0280007462.01.T01 MTR_4g013175 25.000 352 178 15 1 281 1 337 3.18e-13 70.9
MsG0280007462.01.T01 MTR_7g061090 25.449 334 173 17 4 281 22 335 3.28e-13 70.9
MsG0280007462.01.T01 MTR_5g057040 30.159 189 103 7 4 170 46 227 3.50e-13 71.6
MsG0280007462.01.T01 MTR_5g069760 25.000 316 180 14 4 282 6 301 3.89e-13 70.5
MsG0280007462.01.T01 MTR_7g050480 22.956 318 184 12 4 282 22 317 5.71e-13 70.1
MsG0280007462.01.T01 MTR_7g091640 23.077 325 186 13 4 281 35 342 5.76e-13 70.1
MsG0280007462.01.T01 MTR_4g118370 28.141 199 88 10 101 281 30 191 6.64e-13 68.6
MsG0280007462.01.T01 MTR_5g075370 25.904 332 169 19 12 280 16 333 7.04e-13 70.5
MsG0280007462.01.T01 MTR_6g079810 22.222 423 227 18 4 358 70 458 7.23e-13 70.1
MsG0280007462.01.T01 MTR_7g066850 23.885 314 189 11 4 281 23 322 7.70e-13 70.1
MsG0280007462.01.T01 MTR_0242s0060 25.532 329 181 15 4 281 9 324 8.93e-13 69.7
MsG0280007462.01.T01 MTR_0242s0040 25.532 329 181 15 4 281 9 324 8.93e-13 69.7
MsG0280007462.01.T01 MTR_1g097370 31.034 174 99 7 119 281 121 284 1.12e-12 69.7
MsG0280007462.01.T01 MTR_6g086825 23.032 343 182 11 4 281 70 395 1.13e-12 69.3
MsG0280007462.01.T01 MTR_4g117850 26.333 300 173 15 4 275 23 302 1.22e-12 68.9
MsG0280007462.01.T01 MTR_4g094365 25.338 296 186 11 4 277 8 290 1.48e-12 68.6
MsG0280007462.01.T01 MTR_7g016930 25.083 303 184 12 4 277 16 304 1.57e-12 68.2
MsG0280007462.01.T01 MTR_2g065840 22.636 349 213 15 12 318 20 353 1.66e-12 68.6
MsG0280007462.01.T01 MTR_3g096270 29.464 224 113 10 4 221 45 229 2.44e-12 67.4
MsG0280007462.01.T01 MTR_4g033495 23.547 344 191 13 2 295 25 346 2.48e-12 68.2
MsG0280007462.01.T01 MTR_7g057270 25.210 357 203 13 4 307 26 371 3.02e-12 68.2
MsG0280007462.01.T01 MTR_4g008790 23.659 410 192 17 1 319 30 409 3.06e-12 68.2
MsG0280007462.01.T01 MTR_7g055977 23.659 317 185 13 4 281 7 305 3.26e-12 67.8
MsG0280007462.01.T01 MTR_8g467670 24.921 317 179 15 4 279 14 312 3.37e-12 67.8
MsG0280007462.01.T01 MTR_6g092560 25.532 329 172 17 4 281 12 318 4.48e-12 67.4
MsG0280007462.01.T01 MTR_5g010660 24.921 317 184 13 3 290 33 324 4.65e-12 67.4
MsG0280007462.01.T01 MTR_4g122850 26.756 299 170 16 15 281 12 293 4.89e-12 67.0
MsG0280007462.01.T01 MTR_5g010610 23.032 343 192 11 3 282 33 366 5.52e-12 67.4
MsG0280007462.01.T01 MTR_2g010950 23.824 319 197 8 2 281 18 329 5.61e-12 67.0
MsG0280007462.01.T01 MTR_5g069390 22.715 383 207 17 2 318 24 383 7.33e-12 67.0
MsG0280007462.01.T01 MTR_5g043605 24.150 294 164 10 4 281 25 275 7.62e-12 66.6
MsG0280007462.01.T01 MTR_5g010550 23.919 347 187 12 3 282 43 379 7.67e-12 67.0
MsG0280007462.01.T01 MTR_5g010550 23.919 347 187 12 3 282 57 393 8.24e-12 67.0
MsG0280007462.01.T01 MTR_3g464470 23.492 315 192 11 2 281 5 305 8.50e-12 66.6
MsG0280007462.01.T01 MTR_4g102410 22.762 391 236 15 4 342 61 437 9.46e-12 66.6
MsG0280007462.01.T01 MTR_3g011650 28.431 204 132 4 7 198 82 283 1.06e-11 65.5
MsG0280007462.01.T01 MTR_5g010560 23.256 344 191 11 3 282 43 377 1.10e-11 66.6
MsG0280007462.01.T01 MTR_5g069930 24.606 317 183 15 4 281 6 305 1.22e-11 65.9
MsG0280007462.01.T01 MTR_5g070088 24.138 319 190 12 4 281 7 314 1.25e-11 65.9
MsG0280007462.01.T01 MTR_5g027370 25.153 326 185 14 2 284 27 336 1.32e-11 66.2
MsG0280007462.01.T01 MTR_5g097350 22.930 314 183 9 13 281 25 324 1.79e-11 65.5
MsG0280007462.01.T01 MTR_7g050520 22.327 318 186 12 4 282 22 317 1.89e-11 65.5
MsG0280007462.01.T01 MTR_4g024870 31.156 199 100 11 5 175 45 234 1.89e-11 65.5
MsG0280007462.01.T01 MTR_7g056503 23.782 349 208 15 4 307 21 356 1.96e-11 65.5
MsG0280007462.01.T01 MTR_8g032390 26.027 292 177 12 4 281 40 306 2.01e-11 65.1
MsG0280007462.01.T01 MTR_4g023440 25.581 301 146 15 4 281 18 263 2.03e-11 65.1
MsG0280007462.01.T01 MTR_4g080200 24.260 338 210 15 4 318 3 317 2.12e-11 65.1
MsG0280007462.01.T01 MTR_7g052670 23.856 306 167 15 56 312 100 388 2.40e-11 65.5
MsG0280007462.01.T01 MTR_5g027330 25.076 327 184 15 2 284 38 347 2.78e-11 65.1
MsG0280007462.01.T01 MTR_1g037540 23.631 347 191 14 4 287 5 340 2.91e-11 65.1
MsG0280007462.01.T01 MTR_2g028120 41.860 86 33 3 295 379 7 76 3.12e-11 59.3
MsG0280007462.01.T01 MTR_2g066150 23.490 298 193 11 4 281 12 294 3.45e-11 64.3
MsG0280007462.01.T01 MTR_4g023150 25.000 300 183 12 4 281 10 289 4.31e-11 64.3
MsG0280007462.01.T01 MTR_2g021770 21.345 342 192 11 6 282 14 343 5.43e-11 63.9
MsG0280007462.01.T01 MTR_5g056020 23.184 358 199 15 4 297 17 362 5.43e-11 64.3
MsG0280007462.01.T01 MTR_4g023190 26.797 306 169 16 4 281 10 288 5.49e-11 63.9
MsG0280007462.01.T01 MTR_3g007390 27.673 159 93 4 133 283 3 147 5.53e-11 62.0
MsG0280007462.01.T01 MTR_3g009250 29.524 210 133 6 1 198 38 244 5.56e-11 62.8
MsG0280007462.01.T01 MTR_3g083660 24.294 177 117 6 134 310 79 238 5.70e-11 63.2
MsG0280007462.01.T01 MTR_8g101940 22.408 299 199 8 4 278 2 291 5.99e-11 63.9
MsG0280007462.01.T01 MTR_4g118380 25.680 331 172 16 4 282 8 316 6.58e-11 63.5
MsG0280007462.01.T01 MTR_2g021950 21.752 331 178 15 12 281 24 334 7.77e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007462.01.T01 AT4G12560 31.127 408 227 13 1 375 1 387 5.89e-48 168
MsG0280007462.01.T01 AT4G12560 31.127 408 227 13 1 375 1 387 5.89e-48 168
MsG0280007462.01.T01 AT4G12560 31.127 408 227 13 1 375 1 387 5.89e-48 168
MsG0280007462.01.T01 AT3G06240 27.751 418 209 15 4 360 36 421 5.31e-30 120
MsG0280007462.01.T01 AT4G22390 28.108 370 208 14 1 338 1 344 1.45e-28 115
MsG0280007462.01.T01 AT4G22390 28.108 370 208 14 1 338 1 344 1.55e-28 115
MsG0280007462.01.T01 AT3G23880 26.846 298 190 7 3 281 13 301 5.73e-24 102
MsG0280007462.01.T01 AT3G16210 26.667 285 182 11 4 281 5 269 5.37e-21 93.6
MsG0280007462.01.T01 AT3G10430 29.870 231 145 11 2 219 3 229 1.44e-18 86.7
MsG0280007462.01.T01 AT1G12170 30.508 236 130 11 4 216 6 230 2.77e-17 82.8
MsG0280007462.01.T01 AT3G07870 23.472 409 234 16 1 356 25 407 4.11e-16 79.7
MsG0280007462.01.T01 AT3G08750 27.111 225 155 7 1 219 9 230 5.21e-14 73.2
MsG0280007462.01.T01 AT2G14710 33.005 203 111 10 1 196 4 188 9.89e-14 72.4
MsG0280007462.01.T01 AT3G21410 27.609 297 180 15 4 281 38 318 3.50e-13 70.9
MsG0280007462.01.T01 AT1G47390 27.431 288 160 15 4 267 7 269 6.82e-13 69.7
MsG0280007462.01.T01 AT5G50220 23.050 282 177 10 4 279 33 280 7.17e-13 69.7
MsG0280007462.01.T01 AT1G33530 26.333 300 165 10 2 275 95 364 6.22e-12 67.0
MsG0280007462.01.T01 AT5G47300 23.333 240 160 7 1 222 43 276 6.64e-12 67.0
MsG0280007462.01.T01 AT4G10190 22.581 310 192 12 1 282 6 295 1.78e-11 65.5
MsG0280007462.01.T01 AT3G16880 27.541 305 178 16 1 282 4 288 3.68e-11 64.3
MsG0280007462.01.T01 AT4G21240 25.000 240 156 8 4 222 36 272 8.35e-11 63.5

Find 89 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTATAATCACTCTTAA+AGG 0.184248 2:+15821872 None:intergenic
CCCACTCTTCCTCATTCTTA+TGG 0.195501 2:-15822473 MsG0280007462.01.T01:CDS
GGTGAGCGGGAAAGAATTTC+AGG 0.226391 2:+15822800 None:intergenic
CTAAATTTATTGTTATTAAT+AGG 0.257189 2:+15821744 None:intergenic
TACAATTGATGTTTCGCATT+TGG 0.258610 2:-15822132 MsG0280007462.01.T01:CDS
TGAGATATGAAACTAATTCT+AGG 0.294824 2:-15822088 MsG0280007462.01.T01:CDS
TAATCAATAAAGTTGATGTT+TGG 0.297855 2:-15822058 MsG0280007462.01.T01:CDS
CTATTAATAACAATAAATTT+AGG 0.307142 2:-15821743 MsG0280007462.01.T01:CDS
GTTTGGGTGATGAAAGAATA+TGG 0.311373 2:-15822041 MsG0280007462.01.T01:CDS
TTGAGATCTTTGAAGCCTTT+AGG 0.323643 2:-15821960 MsG0280007462.01.T01:CDS
ACAATTGATGTTTCGCATTT+GGG 0.333192 2:-15822131 MsG0280007462.01.T01:CDS
TCTCTTCATTGGGTAGTAGC+TGG 0.343067 2:-15822254 MsG0280007462.01.T01:CDS
GAATCGGAGGAGTGATTGTT+TGG 0.343298 2:+15822778 None:intergenic
GGTTAGGGAAATCGAGTTGA+TGG 0.345006 2:+15822645 None:intergenic
AATGAGGAAGAGTGGGATAA+GGG 0.353681 2:+15822480 None:intergenic
GGAATTGCAGCGGTTAGGTT+AGG 0.355033 2:+15822629 None:intergenic
GTGATTATAAGAAGTTGTTT+TGG 0.366450 2:-15821863 MsG0280007462.01.T01:CDS
ATCATAGCTTCATCGAAATT+AGG 0.366570 2:+15821798 None:intergenic
AATCAATAAAGTTGATGTTT+GGG 0.367209 2:-15822057 MsG0280007462.01.T01:CDS
CTCTTCATTGGGTAGTAGCT+GGG 0.369090 2:-15822253 MsG0280007462.01.T01:CDS
GAAGTTGTGGGAATCGATTA+AGG 0.373141 2:+15822730 None:intergenic
TAGAATCTGCGAAGCTGTCT+TGG 0.380268 2:-15821902 MsG0280007462.01.T01:CDS
AATCGATGTTTACGGATGAT+AGG 0.385298 2:+15822506 None:intergenic
TCGTTGAGAATTCTCTTCAT+TGG 0.385529 2:-15822265 MsG0280007462.01.T01:CDS
GAATGAGGAAGAGTGGGATA+AGG 0.386448 2:+15822479 None:intergenic
TCATCGAAATTAGGAATTCC+TGG 0.392031 2:+15821807 None:intergenic
CGTTGAGAATTCTCTTCATT+GGG 0.395069 2:-15822264 MsG0280007462.01.T01:CDS
CTTAATAGTGTCCGACAGAC+TGG 0.402352 2:+15822310 None:intergenic
AAGACAAAACTGCTGCTCTC+TGG 0.432170 2:-15822532 MsG0280007462.01.T01:CDS
AAGGGATGAATCGATGTTTA+CGG 0.433999 2:+15822498 None:intergenic
GAGTGATTGTTTGGGTGAGC+GGG 0.452450 2:+15822787 None:intergenic
GAATTGCAGCGGTTAGGTTA+GGG 0.452533 2:+15822630 None:intergenic
GAAATCGAGTTGATGGAGAT+TGG 0.458493 2:+15822652 None:intergenic
TTAAGTTTACTCAAACCATA+GGG 0.467001 2:-15822292 MsG0280007462.01.T01:CDS
TAGGCAAGGAAGGTGGTAGA+AGG 0.468844 2:+15821763 None:intergenic
AATATGGATTAAACGATAGT+TGG 0.475943 2:-15822025 MsG0280007462.01.T01:CDS
AGAATCTGCGAAGCTGTCTT+GGG 0.480104 2:-15821901 MsG0280007462.01.T01:CDS
GGAGGATGAGGTTGAAATTG+AGG 0.481196 2:+15822684 None:intergenic
GGCAACCTCTTTGTCGCTCG+TGG 0.488346 2:-15822452 MsG0280007462.01.T01:CDS
ATTAAGTTTACTCAAACCAT+AGG 0.498522 2:-15822293 MsG0280007462.01.T01:CDS
TGATAGAAGTAAAGTTCTGT+TGG 0.500109 2:-15821928 MsG0280007462.01.T01:CDS
AATCGGAGGAGTGATTGTTT+GGG 0.500661 2:+15822779 None:intergenic
AAGAAATATATCTCTCTCCT+TGG 0.508976 2:-15822590 MsG0280007462.01.T01:CDS
TCTTCATTGGGTAGTAGCTG+GGG 0.509847 2:-15822252 MsG0280007462.01.T01:CDS
GCTACTTCTATTTCAGGAAG+AGG 0.513374 2:+15822170 None:intergenic
GAGAGATATATTTCTTCAGA+GGG 0.513711 2:+15822597 None:intergenic
TTGTTATTAATAGGCAAGGA+AGG 0.514020 2:+15821753 None:intergenic
AGAGAGATATATTTCTTCAG+AGG 0.514537 2:+15822596 None:intergenic
TGGAGTTGTGACGGAGGATG+AGG 0.518508 2:+15822672 None:intergenic
TTGAACGAGTTTGTAATCAT+CGG 0.524234 2:+15822409 None:intergenic
TTTATTGTTATTAATAGGCA+AGG 0.524414 2:+15821749 None:intergenic
GAGGATGAGGTTGAAATTGA+GGG 0.526244 2:+15822685 None:intergenic
TGAGTGGAATTGCAGCGGTT+AGG 0.530769 2:+15822624 None:intergenic
ATTCTCAACGAAAACCCCTA+TGG 0.532275 2:+15822277 None:intergenic
TCTCTCCTTGGTTCATGTAA+CGG 0.532456 2:-15822578 MsG0280007462.01.T01:CDS
TTCTTCAGAGGGTGTTTGAG+TGG 0.532870 2:+15822608 None:intergenic
CTTCATTGGGTAGTAGCTGG+GGG 0.538016 2:-15822251 MsG0280007462.01.T01:CDS
CTACGACGCTTACCGTTCAC+AGG 0.538828 2:-15822375 MsG0280007462.01.T01:CDS
GTGAAGGTTGGTGAAGTTGT+GGG 0.548394 2:+15822718 None:intergenic
AATTGTTCACTCTGGATGAA+TGG 0.558996 2:-15821998 MsG0280007462.01.T01:CDS
GCCATAAGAATGAGGAAGAG+TGG 0.563455 2:+15822472 None:intergenic
GGAGTGATTGTTTGGGTGAG+CGG 0.563996 2:+15822786 None:intergenic
GGTGAAGGTTGGTGAAGTTG+TGG 0.565045 2:+15822717 None:intergenic
GATGAAGCTATGATTTACGT+TGG 0.567235 2:-15821789 MsG0280007462.01.T01:CDS
GTGAGCGGGAAAGAATTTCA+GGG 0.569971 2:+15822801 None:intergenic
ACGGTAAGCGTCGTAGAGAG+AGG 0.571597 2:+15822382 None:intergenic
CCATAAGAATGAGGAAGAGT+GGG 0.579027 2:+15822473 None:intergenic
TAATAACAATAAATTTAGGA+AGG 0.580820 2:-15821739 MsG0280007462.01.T01:CDS
TTGAAATTGATCGGAATCGG+AGG 0.585364 2:+15822765 None:intergenic
AGTTTGTAATCATCGGCAAA+CGG 0.585407 2:+15822416 None:intergenic
AAGAGGTTGCCATAAGAATG+AGG 0.588429 2:+15822464 None:intergenic
CTATCACTAGAATAACCTAA+AGG 0.588683 2:+15821945 None:intergenic
CGTCCTTGGAGATGCAGAGG+AGG 0.593549 2:+15822555 None:intergenic
TTGGTGTAAATTGTTCACTC+TGG 0.594645 2:-15822006 MsG0280007462.01.T01:CDS
CGGCCTCCTCTGCATCTCCA+AGG 0.595016 2:-15822558 MsG0280007462.01.T01:CDS
CTTCGTCCTTGGAGATGCAG+AGG 0.599550 2:+15822552 None:intergenic
TTAATAGTGTCCGACAGACT+GGG 0.600667 2:+15822311 None:intergenic
CGAAGCCACGAGCGACAAAG+AGG 0.603771 2:+15822447 None:intergenic
GACGATGGCTGATCTTCCGT+CGG 0.612119 2:-15822831 None:intergenic
CTTGTGTTATGTTAAATGCG+AGG 0.614774 2:+15822210 None:intergenic
GATGGAGATTGGAGTTGTGA+CGG 0.617047 2:+15822663 None:intergenic
TTATTAATAGGCAAGGAAGG+TGG 0.625480 2:+15821756 None:intergenic
GAAAGCACTTCCCAGTCTGT+CGG 0.636372 2:-15822321 MsG0280007462.01.T01:CDS
TGAACAGTCTCACCTGTGAA+CGG 0.637737 2:+15822363 None:intergenic
GGAGATTGGAGTTGTGACGG+AGG 0.639817 2:+15822666 None:intergenic
ATTTCAGGGAACAGTTCCGA+CGG 0.650590 2:+15822815 None:intergenic
GTGTTTGAGTGGAATTGCAG+CGG 0.652205 2:+15822619 None:intergenic
TAAGTTTACTCAAACCATAG+GGG 0.654538 2:-15822291 MsG0280007462.01.T01:CDS
GGAGGCCGTTACATGAACCA+AGG 0.696444 2:+15822573 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATTAATAACAATAAATTT+AGG - Chr2:15822791-15822810 MsG0280007462.01.T01:CDS 10.0%
!!! CTAAATTTATTGTTATTAAT+AGG + Chr2:15822793-15822812 None:intergenic 10.0%
!! TAATAACAATAAATTTAGGA+AGG - Chr2:15822795-15822814 MsG0280007462.01.T01:CDS 15.0%
!!! AATCAATAAAGTTGATGTTT+GGG - Chr2:15822477-15822496 MsG0280007462.01.T01:CDS 20.0%
!!! TAAGTGATTTTGAAATTGAT+CGG + Chr2:15821781-15821800 None:intergenic 20.0%
!!! TAATCAATAAAGTTGATGTT+TGG - Chr2:15822476-15822495 MsG0280007462.01.T01:CDS 20.0%
!!! TTACTTTCGTATTTTAAACT+GGG + Chr2:15822830-15822849 None:intergenic 20.0%
!!! TTTATTGTTATTAATAGGCA+AGG + Chr2:15822788-15822807 None:intergenic 20.0%
! ATTAAGTTTACTCAAACCAT+AGG - Chr2:15822241-15822260 MsG0280007462.01.T01:CDS 25.0%
! CTTCTTATAATCACTCTTAA+AGG + Chr2:15822665-15822684 None:intergenic 25.0%
! TGAGATATGAAACTAATTCT+AGG - Chr2:15822446-15822465 MsG0280007462.01.T01:CDS 25.0%
! TTAAGTTTACTCAAACCATA+GGG - Chr2:15822242-15822261 MsG0280007462.01.T01:CDS 25.0%
!! AATATGGATTAAACGATAGT+TGG - Chr2:15822509-15822528 MsG0280007462.01.T01:CDS 25.0%
!! GTGATTATAAGAAGTTGTTT+TGG - Chr2:15822671-15822690 MsG0280007462.01.T01:CDS 25.0%
!!! ATTTTGAAATTGATCGGAAT+CGG + Chr2:15821775-15821794 None:intergenic 25.0%
!!! TACTTTCGTATTTTAAACTG+GGG + Chr2:15822829-15822848 None:intergenic 25.0%
AAGAAATATATCTCTCTCCT+TGG - Chr2:15821944-15821963 MsG0280007462.01.T01:CDS 30.0%
ACAATTGATGTTTCGCATTT+GGG - Chr2:15822403-15822422 MsG0280007462.01.T01:CDS 30.0%
AGAGAGATATATTTCTTCAG+AGG + Chr2:15821941-15821960 None:intergenic 30.0%
ATCATAGCTTCATCGAAATT+AGG + Chr2:15822739-15822758 None:intergenic 30.0%
CTATCACTAGAATAACCTAA+AGG + Chr2:15822592-15822611 None:intergenic 30.0%
GAGAGATATATTTCTTCAGA+GGG + Chr2:15821940-15821959 None:intergenic 30.0%
TAAGTTTACTCAAACCATAG+GGG - Chr2:15822243-15822262 MsG0280007462.01.T01:CDS 30.0%
TACAATTGATGTTTCGCATT+TGG - Chr2:15822402-15822421 MsG0280007462.01.T01:CDS 30.0%
TGATAGAAGTAAAGTTCTGT+TGG - Chr2:15822606-15822625 MsG0280007462.01.T01:CDS 30.0%
TTGAACGAGTTTGTAATCAT+CGG + Chr2:15822128-15822147 None:intergenic 30.0%
! TTGTTATTAATAGGCAAGGA+AGG + Chr2:15822784-15822803 None:intergenic 30.0%
!! CTTTTAGCTACTTCTATTTC+AGG + Chr2:15822373-15822392 None:intergenic 30.0%
AAGGGATGAATCGATGTTTA+CGG + Chr2:15822039-15822058 None:intergenic 35.0%
AATCGATGTTTACGGATGAT+AGG + Chr2:15822031-15822050 None:intergenic 35.0%
AATTGTTCACTCTGGATGAA+TGG - Chr2:15822536-15822555 MsG0280007462.01.T01:CDS 35.0%
AGTTTGTAATCATCGGCAAA+CGG + Chr2:15822121-15822140 None:intergenic 35.0%
CGTTGAGAATTCTCTTCATT+GGG - Chr2:15822270-15822289 MsG0280007462.01.T01:CDS 35.0%
CTTGTGTTATGTTAAATGCG+AGG + Chr2:15822327-15822346 None:intergenic 35.0%
GAAAAAGTTACTTGTGTTCC+AGG - Chr2:15822709-15822728 MsG0280007462.01.T01:CDS 35.0%
GATGAAGCTATGATTTACGT+TGG - Chr2:15822745-15822764 MsG0280007462.01.T01:CDS 35.0%
GTTTGGGTGATGAAAGAATA+TGG - Chr2:15822493-15822512 MsG0280007462.01.T01:CDS 35.0%
TCATCGAAATTAGGAATTCC+TGG + Chr2:15822730-15822749 None:intergenic 35.0%
TCGTTGAGAATTCTCTTCAT+TGG - Chr2:15822269-15822288 MsG0280007462.01.T01:CDS 35.0%
TTATTAATAGGCAAGGAAGG+TGG + Chr2:15822781-15822800 None:intergenic 35.0%
TTGGTGTAAATTGTTCACTC+TGG - Chr2:15822528-15822547 MsG0280007462.01.T01:CDS 35.0%
! AACACAAGAGATTTTCAACG+AGG - Chr2:15822339-15822358 MsG0280007462.01.T01:CDS 35.0%
! TGAAATTGAGGGAGTTTTTG+AGG + Chr2:15821841-15821860 None:intergenic 35.0%
!! TTGAGATCTTTGAAGCCTTT+AGG - Chr2:15822574-15822593 MsG0280007462.01.T01:CDS 35.0%
AAGAGGTTGCCATAAGAATG+AGG + Chr2:15822073-15822092 None:intergenic 40.0%
AATCGGAGGAGTGATTGTTT+GGG + Chr2:15821758-15821777 None:intergenic 40.0%
AATGAGGAAGAGTGGGATAA+GGG + Chr2:15822057-15822076 None:intergenic 40.0%
ATTCTCAACGAAAACCCCTA+TGG + Chr2:15822260-15822279 None:intergenic 40.0%
CCATAAGAATGAGGAAGAGT+GGG + Chr2:15822064-15822083 None:intergenic 40.0%
GAAGTTGTGGGAATCGATTA+AGG + Chr2:15821807-15821826 None:intergenic 40.0%
GAGGATGAGGTTGAAATTGA+GGG + Chr2:15821852-15821871 None:intergenic 40.0%
GCTACTTCTATTTCAGGAAG+AGG + Chr2:15822367-15822386 None:intergenic 40.0%
TCTCTCCTTGGTTCATGTAA+CGG - Chr2:15821956-15821975 MsG0280007462.01.T01:CDS 40.0%
TTAATAGTGTCCGACAGACT+GGG + Chr2:15822226-15822245 None:intergenic 40.0%
TTGAAATTGATCGGAATCGG+AGG + Chr2:15821772-15821791 None:intergenic 40.0%
!! GAAATCGAGTTGATGGAGAT+TGG + Chr2:15821885-15821904 None:intergenic 40.0%
!! TTCGTATTTTAAACTGGGGC+TGG + Chr2:15822825-15822844 None:intergenic 40.0%
AAGACAAAACTGCTGCTCTC+TGG - Chr2:15822002-15822021 MsG0280007462.01.T01:CDS 45.0%
AGAATCTGCGAAGCTGTCTT+GGG - Chr2:15822633-15822652 MsG0280007462.01.T01:CDS 45.0%
ATTTCAGGGAACAGTTCCGA+CGG + Chr2:15821722-15821741 None:intergenic 45.0%
CCCACTCTTCCTCATTCTTA+TGG - Chr2:15822061-15822080 MsG0280007462.01.T01:CDS 45.0%
CTCTTCATTGGGTAGTAGCT+GGG - Chr2:15822281-15822300 MsG0280007462.01.T01:CDS 45.0%
CTTAATAGTGTCCGACAGAC+TGG + Chr2:15822227-15822246 None:intergenic 45.0%
GAATCGGAGGAGTGATTGTT+TGG + Chr2:15821759-15821778 None:intergenic 45.0%
GAATGAGGAAGAGTGGGATA+AGG + Chr2:15822058-15822077 None:intergenic 45.0%
GAATTGCAGCGGTTAGGTTA+GGG + Chr2:15821907-15821926 None:intergenic 45.0%
GATGGAGATTGGAGTTGTGA+CGG + Chr2:15821874-15821893 None:intergenic 45.0%
GCCATAAGAATGAGGAAGAG+TGG + Chr2:15822065-15822084 None:intergenic 45.0%
GGAGGATGAGGTTGAAATTG+AGG + Chr2:15821853-15821872 None:intergenic 45.0%
GTGAGCGGGAAAGAATTTCA+GGG + Chr2:15821736-15821755 None:intergenic 45.0%
GTGTTTGAGTGGAATTGCAG+CGG + Chr2:15821918-15821937 None:intergenic 45.0%
TAGAATCTGCGAAGCTGTCT+TGG - Chr2:15822632-15822651 MsG0280007462.01.T01:CDS 45.0%
TCAGCTCAAAAACGAACTCG+TGG - Chr2:15822191-15822210 MsG0280007462.01.T01:CDS 45.0%
TCTCTTCATTGGGTAGTAGC+TGG - Chr2:15822280-15822299 MsG0280007462.01.T01:CDS 45.0%
TCTTCATTGGGTAGTAGCTG+GGG - Chr2:15822282-15822301 MsG0280007462.01.T01:CDS 45.0%
TGAACAGTCTCACCTGTGAA+CGG + Chr2:15822174-15822193 None:intergenic 45.0%
!! AGCAGTTTTGTCTTCGTCCT+TGG + Chr2:15821996-15822015 None:intergenic 45.0%
!! GGTTAGGGAAATCGAGTTGA+TGG + Chr2:15821892-15821911 None:intergenic 45.0%
!! GTGAAGGTTGGTGAAGTTGT+GGG + Chr2:15821819-15821838 None:intergenic 45.0%
!! TTCTTCAGAGGGTGTTTGAG+TGG + Chr2:15821929-15821948 None:intergenic 45.0%
!!! GGAGTTTTTGAGGTGAAGGT+TGG + Chr2:15821831-15821850 None:intergenic 45.0%
!!! TGAGGGAGTTTTTGAGGTGA+AGG + Chr2:15821835-15821854 None:intergenic 45.0%
CTTCATTGGGTAGTAGCTGG+GGG - Chr2:15822283-15822302 MsG0280007462.01.T01:CDS 50.0%
GAGTGATTGTTTGGGTGAGC+GGG + Chr2:15821750-15821769 None:intergenic 50.0%
GGAATTGCAGCGGTTAGGTT+AGG + Chr2:15821908-15821927 None:intergenic 50.0%
GGAGTGATTGTTTGGGTGAG+CGG + Chr2:15821751-15821770 None:intergenic 50.0%
GGTGAGCGGGAAAGAATTTC+AGG + Chr2:15821737-15821756 None:intergenic 50.0%
TAGGCAAGGAAGGTGGTAGA+AGG + Chr2:15822774-15822793 None:intergenic 50.0%
TGAGTGGAATTGCAGCGGTT+AGG + Chr2:15821913-15821932 None:intergenic 50.0%
!! GAAAGCACTTCCCAGTCTGT+CGG - Chr2:15822213-15822232 MsG0280007462.01.T01:CDS 50.0%
!! GGTGAAGGTTGGTGAAGTTG+TGG + Chr2:15821820-15821839 None:intergenic 50.0%
CTACGACGCTTACCGTTCAC+AGG - Chr2:15822159-15822178 MsG0280007462.01.T01:CDS 55.0%
CTTCGTCCTTGGAGATGCAG+AGG + Chr2:15821985-15822004 None:intergenic 55.0%
GGAGATTGGAGTTGTGACGG+AGG + Chr2:15821871-15821890 None:intergenic 55.0%
GGAGGCCGTTACATGAACCA+AGG + Chr2:15821964-15821983 None:intergenic 55.0%
! ACGGTAAGCGTCGTAGAGAG+AGG + Chr2:15822155-15822174 None:intergenic 55.0%
! TGGAGTTGTGACGGAGGATG+AGG + Chr2:15821865-15821884 None:intergenic 55.0%
CGAAGCCACGAGCGACAAAG+AGG + Chr2:15822090-15822109 None:intergenic 60.0%
CGTCCTTGGAGATGCAGAGG+AGG + Chr2:15821982-15822001 None:intergenic 60.0%
GGCAACCTCTTTGTCGCTCG+TGG - Chr2:15822082-15822101 MsG0280007462.01.T01:CDS 60.0%
CGGCCTCCTCTGCATCTCCA+AGG - Chr2:15821976-15821995 MsG0280007462.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15821707 15822849 15821707 ID=MsG0280007462.01;Name=MsG0280007462.01
Chr2 mRNA 15821707 15822849 15821707 ID=MsG0280007462.01.T01;Parent=MsG0280007462.01;Name=MsG0280007462.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|380
Chr2 exon 15821707 15822849 15821707 ID=MsG0280007462.01.T01:exon:3448;Parent=MsG0280007462.01.T01
Chr2 CDS 15821707 15822849 15821707 ID=MsG0280007462.01.T01:cds;Parent=MsG0280007462.01.T01
Gene Sequence

>MsG0280007462.01.T01

ATGGCTGATCTTCCGTCGGAACTGTTCCCTGAAATTCTTTCCCGCTCACCCAAACAATCACTCCTCCGATTCCGATCAATTTCAAAATCACTTAAATCCTTAATCGATTCCCACAACTTCACCAACCTTCACCTCAAAAACTCCCTCAATTTCAACCTCATCCTCCGTCACAACTCCAATCTCCATCAACTCGATTTCCCTAACCTAACCGCTGCAATTCCACTCAAACACCCTCTGAAGAAATATATCTCTCTCCTTGGTTCATGTAACGGCCTCCTCTGCATCTCCAAGGACGAAGACAAAACTGCTGCTCTCTGGAATCCTATCATCCGTAAACATCGATTCATCCCTTATCCCACTCTTCCTCATTCTTATGGCAACCTCTTTGTCGCTCGTGGCTTCGCTTTTGATCCGTTTGCCGATGATTACAAACTCGTTCAAATCTCCTCTCTCTACGACGCTTACCGTTCACAGGTGAGACTGTTCAGCTCAAAAACGAACTCGTGGAAAGCACTTCCCAGTCTGTCGGACACTATTAAGTTTACTCAAACCATAGGGGTTTTCGTTGAGAATTCTCTTCATTGGGTAGTAGCTGGGGGCTGCAGTAAGTATATAATCCTCGCATTTAACATAACACAAGAGATTTTCAACGAGGTTCCTCTTCCTGAAATAGAAGTAGCTAAAAGAAAGATATTTACAATTGATGTTTCGCATTTGGGAAGTTGTCTTTGTATCACTGTGAGATATGAAACTAATTCTAGGAGATACATAATCAATAAAGTTGATGTTTGGGTGATGAAAGAATATGGATTAAACGATAGTTGGTGTAAATTGTTCACTCTGGATGAATGGTATTTTAATACATCTTTGAGATCTTTGAAGCCTTTAGGTTATTCTAGTGATAGAAGTAAAGTTCTGTTGGAAATAGAATCTGCGAAGCTGTCTTGGGCTGATGCCTTTAAGAGTGATTATAAGAAGTTGTTTTGGTATGATCTCAAGAGTGAAAAAGTTACTTGTGTTCCAGGAATTCCTAATTTCGATGAAGCTATGATTTACGTTGGAAGCCTTCTACCACCTTCCTTGCCTATTAATAACAATAAATTTAGGAAGGAGAACCAGCCCCAGTTTAAAATACGAAAGTAA

Protein sequence

>MsG0280007462.01.T01

MADLPSELFPEILSRSPKQSLLRFRSISKSLKSLIDSHNFTNLHLKNSLNFNLILRHNSNLHQLDFPNLTAAIPLKHPLKKYISLLGSCNGLLCISKDEDKTAALWNPIIRKHRFIPYPTLPHSYGNLFVARGFAFDPFADDYKLVQISSLYDAYRSQVRLFSSKTNSWKALPSLSDTIKFTQTIGVFVENSLHWVVAGGCSKYIILAFNITQEIFNEVPLPEIEVAKRKIFTIDVSHLGSCLCITVRYETNSRRYIINKVDVWVMKEYGLNDSWCKLFTLDEWYFNTSLRSLKPLGYSSDRSKVLLEIESAKLSWADAFKSDYKKLFWYDLKSEKVTCVPGIPNFDEAMIYVGSLLPPSLPINNNKFRKENQPQFKIRK*