AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007470.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007470.01.T01 MTR_2g028110 53.367 401 136 10 1 386 1 365 2.88e-123 361
MsG0280007470.01.T01 MTR_2g024110 52.882 399 141 11 1 383 1 368 3.10e-121 356
MsG0280007470.01.T01 MTR_1g068835 53.333 390 141 11 1 381 1 358 3.36e-120 353
MsG0280007470.01.T01 MTR_1g068875 55.216 393 128 12 1 381 1 357 4.41e-120 353
MsG0280007470.01.T01 MTR_2g026010 54.177 395 136 10 1 381 1 364 6.24e-118 348
MsG0280007470.01.T01 MTR_2g031640 53.000 400 139 12 4 388 6 371 9.12e-118 347
MsG0280007470.01.T01 MTR_4g006270 51.741 402 129 9 1 383 1 356 1.12e-115 343
MsG0280007470.01.T01 MTR_2g031720 52.393 397 142 12 1 381 1 366 5.11e-113 336
MsG0280007470.01.T01 MTR_1g068860 54.359 390 139 11 1 381 1 360 1.62e-112 334
MsG0280007470.01.T01 MTR_8g099460 52.778 396 142 11 2 381 3 369 2.68e-112 334
MsG0280007470.01.T01 MTR_2g031680 52.332 386 144 9 4 381 6 359 4.17e-112 333
MsG0280007470.01.T01 MTR_2g425980 48.900 409 148 10 2 381 3 379 8.81e-112 333
MsG0280007470.01.T01 MTR_2g426090 50.250 400 143 12 7 381 9 377 8.04e-110 328
MsG0280007470.01.T01 MTR_0667s0010 48.762 404 151 11 4 381 6 379 2.55e-109 327
MsG0280007470.01.T01 MTR_2g028130 48.104 422 153 12 2 386 3 395 3.92e-109 326
MsG0280007470.01.T01 MTR_2g426020 49.015 406 147 10 4 381 6 379 1.80e-107 322
MsG0280007470.01.T01 MTR_2g426070 49.140 407 144 12 5 381 7 380 3.70e-107 321
MsG0280007470.01.T01 MTR_2g426060 50.123 405 144 13 4 381 6 379 1.69e-106 320
MsG0280007470.01.T01 MTR_2g028140 47.381 420 157 11 2 386 3 393 8.49e-102 308
MsG0280007470.01.T01 MTR_2g028160 46.523 417 154 13 2 379 3 389 8.71e-100 303
MsG0280007470.01.T01 MTR_2g025420 46.190 420 150 15 4 379 6 393 2.03e-98 299
MsG0280007470.01.T01 MTR_4g070550 47.420 407 157 12 2 379 3 381 3.30e-98 298
MsG0280007470.01.T01 MTR_2g021050 47.970 394 156 12 2 381 3 361 1.10e-96 293
MsG0280007470.01.T01 MTR_3g083010 46.370 427 148 17 1 379 1 394 1.17e-95 292
MsG0280007470.01.T01 MTR_2g024100 47.179 390 148 11 19 379 22 382 8.76e-93 284
MsG0280007470.01.T01 MTR_4g133170 40.153 391 199 7 1 385 1 362 3.49e-83 259
MsG0280007470.01.T01 MTR_2g025960 44.514 319 125 8 85 381 1 289 2.06e-74 234
MsG0280007470.01.T01 MTR_2g031700 55.602 241 94 3 4 244 6 233 2.52e-74 233
MsG0280007470.01.T01 MTR_1g068905 41.039 385 133 12 1 381 1 295 6.90e-66 212
MsG0280007470.01.T01 MTR_5g083940 41.623 382 129 14 1 377 1 293 7.78e-62 202
MsG0280007470.01.T01 MTR_2g040050 47.177 248 89 8 60 299 11 224 5.52e-56 184
MsG0280007470.01.T01 MTR_2g022170 75.410 122 29 1 1 121 1 122 1.99e-55 179
MsG0280007470.01.T01 MTR_2g037520 47.159 176 71 6 207 370 1 166 1.81e-36 131
MsG0280007470.01.T01 MTR_7g110360 48.503 167 75 4 1 156 36 202 2.87e-35 132
MsG0280007470.01.T01 MTR_7g110360 40.800 125 51 3 266 382 212 321 4.42e-19 87.8
MsG0280007470.01.T01 MTR_4g061340 31.290 310 179 10 4 299 26 315 3.05e-35 133
MsG0280007470.01.T01 MTR_3g006670 32.704 318 162 15 4 299 49 336 5.74e-33 128
MsG0280007470.01.T01 MTR_3g086960 47.904 167 61 5 224 381 3 152 1.30e-32 120
MsG0280007470.01.T01 MTR_3g086970 42.326 215 79 8 1 215 1 170 3.10e-32 120
MsG0280007470.01.T01 MTR_3g007330 29.677 310 174 13 4 299 48 327 9.06e-32 124
MsG0280007470.01.T01 MTR_3g007430 29.747 316 186 10 7 308 46 339 2.87e-31 122
MsG0280007470.01.T01 MTR_1g097560 27.456 397 211 17 4 380 36 375 2.10e-30 120
MsG0280007470.01.T01 MTR_2g046900 29.551 379 202 19 4 354 28 369 2.16e-29 117
MsG0280007470.01.T01 MTR_1g097490 30.137 365 191 15 4 349 49 368 1.20e-28 115
MsG0280007470.01.T01 MTR_3g010390 28.941 387 215 15 4 357 33 392 2.06e-28 115
MsG0280007470.01.T01 MTR_3g014540 27.960 397 220 20 4 380 29 379 2.46e-28 114
MsG0280007470.01.T01 MTR_8g101580 31.013 316 174 15 1 299 42 330 2.56e-28 115
MsG0280007470.01.T01 MTR_2g021190 26.531 343 210 12 4 333 21 334 3.34e-28 114
MsG0280007470.01.T01 MTR_1g097330 32.248 307 172 11 4 299 16 297 7.87e-28 114
MsG0280007470.01.T01 MTR_0044s0300 30.081 369 189 16 4 352 38 357 1.18e-27 113
MsG0280007470.01.T01 MTR_3g036290 27.318 399 204 13 4 379 22 357 1.30e-27 112
MsG0280007470.01.T01 MTR_3g009310 29.907 321 164 13 4 299 42 326 2.51e-27 112
MsG0280007470.01.T01 MTR_5g046300 28.846 312 180 12 1 299 1 283 5.68e-27 110
MsG0280007470.01.T01 MTR_5g046290 28.846 312 180 12 1 299 1 283 5.68e-27 110
MsG0280007470.01.T01 MTR_7g407070 28.483 323 187 11 4 299 32 337 7.46e-27 110
MsG0280007470.01.T01 MTR_3g007270 27.414 321 184 8 4 299 47 343 1.71e-26 110
MsG0280007470.01.T01 MTR_3g011100 26.500 400 238 13 4 379 235 602 2.52e-26 111
MsG0280007470.01.T01 MTR_2g021155 28.333 360 215 13 4 349 33 363 2.73e-26 111
MsG0280007470.01.T01 MTR_2g021155 28.000 250 149 10 91 334 695 919 3.59e-15 77.8
MsG0280007470.01.T01 MTR_2g021150 29.653 317 176 14 4 299 14 304 3.13e-26 108
MsG0280007470.01.T01 MTR_1g050542 30.818 318 170 12 4 301 58 345 3.26e-26 109
MsG0280007470.01.T01 MTR_3g014570 26.263 396 229 15 4 380 29 380 3.69e-26 108
MsG0280007470.01.T01 MTR_7g013590 27.612 402 226 19 7 379 39 404 5.78e-26 108
MsG0280007470.01.T01 MTR_2g046830 29.288 379 197 19 4 355 25 359 7.02e-26 108
MsG0280007470.01.T01 MTR_5g022420 26.972 393 229 16 4 379 27 378 7.83e-26 107
MsG0280007470.01.T01 MTR_2g021210 28.529 340 196 10 4 333 84 386 9.87e-26 108
MsG0280007470.01.T01 MTR_2g046920 27.273 396 226 17 4 381 24 375 1.46e-25 107
MsG0280007470.01.T01 MTR_3g009240 29.032 310 177 11 4 299 36 316 1.66e-25 107
MsG0280007470.01.T01 MTR_4g031770 29.073 313 184 12 1 299 1 289 3.20e-25 105
MsG0280007470.01.T01 MTR_5g057710 27.554 323 169 11 4 299 46 330 3.84e-25 105
MsG0280007470.01.T01 MTR_3g436150 29.206 315 189 10 4 299 32 331 3.87e-25 105
MsG0280007470.01.T01 MTR_1g055135 30.376 372 191 18 4 349 13 342 4.52e-25 105
MsG0280007470.01.T01 MTR_5g007610 29.154 319 180 11 4 299 41 336 4.96e-25 105
MsG0280007470.01.T01 MTR_1g056710 28.611 360 216 13 1 347 31 362 5.87e-25 105
MsG0280007470.01.T01 MTR_5g057790 25.857 321 177 10 4 299 46 330 6.07e-25 105
MsG0280007470.01.T01 MTR_3g011060 28.037 321 182 12 4 299 28 324 1.05e-24 104
MsG0280007470.01.T01 MTR_2g029990 25.937 347 205 13 5 333 52 364 1.11e-24 104
MsG0280007470.01.T01 MTR_3g007360 28.155 309 181 9 7 299 55 338 1.59e-24 104
MsG0280007470.01.T01 MTR_3g083640 27.619 315 174 10 1 296 52 331 2.35e-24 103
MsG0280007470.01.T01 MTR_3g013770 26.866 402 224 18 4 380 33 389 2.63e-24 103
MsG0280007470.01.T01 MTR_6g053240 29.091 330 165 17 1 297 25 318 2.64e-24 103
MsG0280007470.01.T01 MTR_6g065980 27.124 306 178 10 4 299 16 286 2.73e-24 103
MsG0280007470.01.T01 MTR_3g007410 28.155 309 181 9 7 299 55 338 3.27e-24 103
MsG0280007470.01.T01 MTR_6g053260 26.478 423 221 19 1 384 334 705 4.00e-24 104
MsG0280007470.01.T01 MTR_3g034160 27.327 333 191 12 4 310 9 316 4.55e-24 102
MsG0280007470.01.T01 MTR_3g013740 27.469 324 182 14 4 299 44 342 7.05e-24 102
MsG0280007470.01.T01 MTR_3g024130 30.556 216 124 7 87 299 58 250 9.12e-24 100
MsG0280007470.01.T01 MTR_4g055060 26.286 350 207 10 4 333 30 348 1.40e-23 101
MsG0280007470.01.T01 MTR_5g011200 25.559 313 192 11 4 299 17 305 4.32e-23 99.8
MsG0280007470.01.T01 MTR_4g107820 26.032 315 185 8 2 299 34 317 5.60e-23 99.8
MsG0280007470.01.T01 MTR_4g107780 26.032 315 185 8 2 299 34 317 5.60e-23 99.8
MsG0280007470.01.T01 MTR_4g107820 26.032 315 185 8 2 299 34 317 5.70e-23 100
MsG0280007470.01.T01 MTR_7g070830 26.453 344 190 13 4 299 21 349 5.72e-23 100
MsG0280007470.01.T01 MTR_3g024040 27.528 356 202 16 10 355 37 346 6.49e-23 99.4
MsG0280007470.01.T01 MTR_4g116330 29.283 321 166 14 4 299 23 307 7.42e-23 99.4
MsG0280007470.01.T01 MTR_4g107780 26.032 315 185 8 2 299 34 317 7.45e-23 99.8
MsG0280007470.01.T01 MTR_1g055375 26.891 357 208 12 1 335 1 326 1.06e-22 98.6
MsG0280007470.01.T01 MTR_1g094210 26.359 368 203 14 4 350 57 377 1.08e-22 99.0
MsG0280007470.01.T01 MTR_1g094210 26.575 365 200 14 4 347 57 374 1.56e-22 99.0
MsG0280007470.01.T01 MTR_6g079810 29.080 337 194 14 4 301 70 400 2.28e-22 99.0
MsG0280007470.01.T01 MTR_1g054725 28.571 315 182 16 1 296 17 307 2.72e-22 97.8
MsG0280007470.01.T01 MTR_3g009260 28.479 309 177 10 4 299 41 318 4.04e-22 97.4
MsG0280007470.01.T01 MTR_5g046260 27.597 308 159 14 1 299 1 253 5.21e-22 95.5
MsG0280007470.01.T01 MTR_2g025440 42.857 133 51 4 256 381 1 115 7.74e-22 93.6
MsG0280007470.01.T01 MTR_4g117780 27.129 317 185 11 1 299 8 296 8.24e-22 96.3
MsG0280007470.01.T01 MTR_3g034180 26.727 333 193 12 4 310 123 430 9.20e-22 97.1
MsG0280007470.01.T01 MTR_7g078840 29.261 352 163 18 4 293 10 337 9.26e-22 96.7
MsG0280007470.01.T01 MTR_0054s0090 28.696 345 181 17 4 301 17 343 1.09e-21 96.3
MsG0280007470.01.T01 MTR_8g054320 29.293 297 118 9 4 299 32 237 1.12e-21 94.7
MsG0280007470.01.T01 MTR_2g047832 27.551 392 203 18 4 353 29 381 1.22e-21 96.3
MsG0280007470.01.T01 MTR_3g006570 26.994 326 182 12 4 307 21 312 1.34e-21 95.9
MsG0280007470.01.T01 MTR_5g057690 25.879 313 177 12 4 299 46 320 1.37e-21 95.9
MsG0280007470.01.T01 MTR_7g070880 26.453 344 190 13 4 299 21 349 1.97e-21 95.5
MsG0280007470.01.T01 MTR_4g108820 26.246 301 163 13 4 299 42 288 2.81e-21 94.0
MsG0280007470.01.T01 MTR_4g023120 28.481 316 179 10 3 299 2 289 3.75e-21 94.4
MsG0280007470.01.T01 MTR_2g055970 26.667 360 211 13 4 346 211 534 4.79e-21 95.5
MsG0280007470.01.T01 MTR_4g024890 27.463 335 175 14 1 299 7 309 6.71e-21 93.6
MsG0280007470.01.T01 MTR_6g060650 28.834 326 171 13 4 299 8 302 8.26e-21 93.2
MsG0280007470.01.T01 MTR_5g057020 25.161 310 178 10 4 299 46 315 8.45e-21 92.8
MsG0280007470.01.T01 MTR_5g096630 25.740 338 212 11 3 307 17 348 9.08e-21 93.6
MsG0280007470.01.T01 MTR_3g010590 25.852 352 188 16 4 332 39 340 1.01e-20 93.2
MsG0280007470.01.T01 MTR_1g054575 26.140 329 188 11 4 313 52 344 1.45e-20 94.0
MsG0280007470.01.T01 MTR_4g130330 26.647 334 200 13 2 301 5 327 1.67e-20 92.8
MsG0280007470.01.T01 MTR_2g461450 28.302 318 172 13 1 299 15 295 1.95e-20 92.0
MsG0280007470.01.T01 MTR_7g007300 27.042 355 179 17 4 332 103 403 2.46e-20 92.8
MsG0280007470.01.T01 MTR_3g024110 28.707 317 161 14 4 297 101 375 2.66e-20 92.4
MsG0280007470.01.T01 MTR_4g023080 27.184 309 180 10 4 299 9 285 2.71e-20 91.7
MsG0280007470.01.T01 MTR_3g010920 26.571 350 179 12 4 333 44 335 2.94e-20 91.7
MsG0280007470.01.T01 MTR_3g030240 25.063 399 216 17 4 379 40 378 3.70e-20 91.7
MsG0280007470.01.T01 MTR_3g009300 27.213 305 157 11 7 299 37 288 4.03e-20 91.3
MsG0280007470.01.T01 MTR_3g007300 26.774 310 163 12 1 299 46 302 4.35e-20 91.3
MsG0280007470.01.T01 MTR_2g021252 24.422 389 226 16 7 382 50 383 5.24e-20 91.3
MsG0280007470.01.T01 MTR_4g129190 27.385 325 191 14 3 299 5 312 5.63e-20 91.3
MsG0280007470.01.T01 MTR_7g067680 26.606 327 171 11 1 307 46 323 8.57e-20 90.5
MsG0280007470.01.T01 MTR_8g467140 26.384 307 188 10 4 296 32 314 1.13e-19 89.4
MsG0280007470.01.T01 MTR_7g066060 28.614 332 180 14 4 299 23 333 1.16e-19 90.9
MsG0280007470.01.T01 MTR_4g023070 28.165 316 180 10 3 299 2 289 1.25e-19 89.7
MsG0280007470.01.T01 MTR_6g016285 28.097 331 182 15 4 297 21 332 1.32e-19 90.5
MsG0280007470.01.T01 MTR_3g034130 24.289 387 241 14 4 366 9 367 1.65e-19 89.4
MsG0280007470.01.T01 MTR_6g004660 27.607 326 179 16 4 299 16 314 2.40e-19 89.4
MsG0280007470.01.T01 MTR_7g077070 27.247 356 169 14 4 299 16 341 2.55e-19 89.7
MsG0280007470.01.T01 MTR_7g017130 25.882 340 189 13 3 301 17 334 2.75e-19 89.4
MsG0280007470.01.T01 MTR_3g010430 26.667 330 180 11 4 307 36 329 2.95e-19 89.4
MsG0280007470.01.T01 MTR_7g017170 25.882 340 189 13 3 301 17 334 3.03e-19 89.0
MsG0280007470.01.T01 MTR_7g070440 26.875 320 185 15 6 299 9 305 3.73e-19 88.6
MsG0280007470.01.T01 MTR_4g013180 26.590 346 183 14 4 308 11 326 3.85e-19 89.4
MsG0280007470.01.T01 MTR_2g078900 27.692 325 158 16 4 297 33 311 4.35e-19 88.2
MsG0280007470.01.T01 MTR_3g103020 29.141 326 163 15 4 299 20 307 4.54e-19 88.2
MsG0280007470.01.T01 MTR_7g110370 54.348 92 29 3 244 332 16 97 5.47e-19 85.5
MsG0280007470.01.T01 MTR_4g030830 24.405 336 186 11 4 299 9 316 6.71e-19 87.8
MsG0280007470.01.T01 MTR_3g036335 29.503 322 165 15 4 299 41 326 7.23e-19 87.8
MsG0280007470.01.T01 MTR_6g007135 26.161 409 225 18 4 379 26 390 7.95e-19 87.8
MsG0280007470.01.T01 MTR_3g010520 26.899 316 176 10 4 307 25 297 8.39e-19 87.4
MsG0280007470.01.T01 MTR_3g030350 25.559 313 185 10 4 299 35 316 9.66e-19 87.4
MsG0280007470.01.T01 MTR_6g092560 27.711 332 179 16 4 299 12 318 1.34e-18 87.4
MsG0280007470.01.T01 MTR_6g027910 23.288 365 212 16 1 334 6 333 1.42e-18 87.0
MsG0280007470.01.T01 MTR_4g023090 26.752 314 185 11 4 299 16 302 1.45e-18 87.0
MsG0280007470.01.T01 MTR_4g028680 24.260 338 200 12 4 301 16 337 1.66e-18 87.0
MsG0280007470.01.T01 MTR_6g086825 27.485 342 190 15 4 301 70 397 1.88e-18 87.0
MsG0280007470.01.T01 MTR_4g102410 24.773 331 211 12 4 301 61 386 2.00e-18 87.0
MsG0280007470.01.T01 MTR_1g055070 25.279 269 168 8 1 247 46 303 2.00e-18 86.7
MsG0280007470.01.T01 MTR_5g070080 26.586 331 183 10 4 299 10 315 2.13e-18 86.3
MsG0280007470.01.T01 MTR_2g046860 27.240 279 167 12 82 354 2 250 2.47e-18 85.5
MsG0280007470.01.T01 MTR_8g467670 29.538 325 178 18 4 300 14 315 3.34e-18 85.9
MsG0280007470.01.T01 MTR_1g007410 26.478 389 213 17 4 350 22 379 3.59e-18 85.9
MsG0280007470.01.T01 MTR_6g048120 27.247 356 200 15 4 333 36 358 3.65e-18 85.9
MsG0280007470.01.T01 MTR_4g023130 26.087 299 155 9 4 299 9 244 4.56e-18 84.7
MsG0280007470.01.T01 MTR_3g058470 25.366 410 204 18 1 379 34 372 4.59e-18 85.5
MsG0280007470.01.T01 MTR_3g011020 25.552 317 176 10 4 299 28 305 4.73e-18 85.1
MsG0280007470.01.T01 MTR_5g009060 26.822 343 185 14 4 302 25 345 8.21e-18 84.7
MsG0280007470.01.T01 MTR_6g004210 25.153 326 184 10 13 299 34 338 8.35e-18 85.1
MsG0280007470.01.T01 MTR_3g010620 24.755 408 219 14 7 379 39 393 9.04e-18 84.7
MsG0280007470.01.T01 MTR_0134s0060 24.365 394 225 16 4 347 12 382 9.52e-18 84.7
MsG0280007470.01.T01 MTR_4g030090 25.507 345 184 14 2 308 12 321 9.53e-18 84.7
MsG0280007470.01.T01 MTR_7g079160 27.688 372 174 18 4 306 8 353 1.13e-17 84.7
MsG0280007470.01.T01 MTR_8g433040 28.205 312 175 14 4 299 18 296 1.36e-17 84.0
MsG0280007470.01.T01 MTR_8g032380 28.205 312 175 14 4 299 18 296 1.36e-17 84.0
MsG0280007470.01.T01 MTR_5g097220 25.707 389 219 13 3 346 12 375 1.37e-17 84.3
MsG0280007470.01.T01 MTR_7g060960 24.765 319 177 9 4 305 32 304 1.40e-17 84.0
MsG0280007470.01.T01 MTR_4g028750 25.826 333 195 12 4 299 16 333 1.45e-17 84.0
MsG0280007470.01.T01 MTR_2g021800 25.843 356 186 16 4 299 16 353 1.64e-17 84.0
MsG0280007470.01.T01 MTR_4g019990 25.000 344 187 14 2 302 4 319 1.80e-17 83.6
MsG0280007470.01.T01 MTR_2g034700 25.982 331 179 16 4 301 14 311 1.84e-17 83.6
MsG0280007470.01.T01 MTR_8g063370 24.922 321 186 13 12 302 32 327 1.93e-17 83.6
MsG0280007470.01.T01 MTR_6g027890 25.090 279 156 13 81 340 47 291 2.07e-17 82.8
MsG0280007470.01.T01 MTR_8g013010 28.720 289 149 13 4 264 54 313 2.50e-17 82.4
MsG0280007470.01.T01 MTR_0760s0010 27.302 315 157 14 9 297 52 320 2.93e-17 83.2
MsG0280007470.01.T01 MTR_8g464770 26.852 324 193 13 4 301 12 317 3.04e-17 82.8
MsG0280007470.01.T01 MTR_2g022000 25.070 359 188 12 4 301 16 354 3.08e-17 83.2
MsG0280007470.01.T01 MTR_8g064890 25.387 323 203 11 4 301 16 325 3.16e-17 82.8
MsG0280007470.01.T01 MTR_3g036430 26.510 298 175 11 1 297 17 271 3.23e-17 82.4
MsG0280007470.01.T01 MTR_7g077990 25.145 346 163 13 4 299 17 316 3.80e-17 82.8
MsG0280007470.01.T01 MTR_6g007150 26.421 299 171 13 55 333 29 298 4.37e-17 82.0
MsG0280007470.01.T01 MTR_7g056710 28.614 332 163 16 4 299 18 311 4.62e-17 82.4
MsG0280007470.01.T01 MTR_7g078040 27.606 355 172 16 4 299 9 337 4.93e-17 82.8
MsG0280007470.01.T01 MTR_4g021785 27.358 318 169 12 4 299 9 286 5.60e-17 82.0
MsG0280007470.01.T01 MTR_7g061090 27.566 341 175 14 4 299 22 335 7.62e-17 82.0
MsG0280007470.01.T01 MTR_6g021880 25.806 403 214 21 13 379 29 382 8.23e-17 81.6
MsG0280007470.01.T01 MTR_0128s0020 24.695 328 183 11 4 296 18 316 8.47e-17 81.6
MsG0280007470.01.T01 MTR_4g014370 25.862 348 196 16 4 301 11 346 8.58e-17 82.0
MsG0280007470.01.T01 MTR_1g053510 26.012 346 201 12 2 304 13 346 9.27e-17 81.6
MsG0280007470.01.T01 MTR_5g097210 29.781 319 167 16 4 299 9 293 1.35e-16 80.9
MsG0280007470.01.T01 MTR_2g043410 26.225 347 167 14 4 299 22 330 1.94e-16 80.9
MsG0280007470.01.T01 MTR_5g070088 25.373 335 184 10 4 299 7 314 1.95e-16 80.5
MsG0280007470.01.T01 MTR_3g030310 24.217 351 191 15 4 320 21 330 1.96e-16 80.5
MsG0280007470.01.T01 MTR_6g055210 26.567 335 185 13 4 299 22 334 2.52e-16 80.5
MsG0280007470.01.T01 MTR_5g092850 26.398 322 204 14 7 300 19 335 3.31e-16 80.1
MsG0280007470.01.T01 MTR_3g010970 23.824 319 177 8 7 304 51 324 3.46e-16 79.7
MsG0280007470.01.T01 MTR_2g047892 25.298 336 181 13 4 300 22 326 3.68e-16 79.7
MsG0280007470.01.T01 MTR_2g038680 23.038 395 241 12 3 354 15 389 4.15e-16 79.7
MsG0280007470.01.T01 MTR_5g096910 27.273 341 190 16 4 308 17 335 4.45e-16 79.7
MsG0280007470.01.T01 MTR_0115s0020 26.100 341 191 16 1 301 7 326 4.67e-16 79.7
MsG0280007470.01.T01 MTR_8g032390 27.063 303 178 13 4 299 40 306 4.84e-16 79.3
MsG0280007470.01.T01 MTR_0831s0010 28.086 324 192 13 4 301 50 358 4.86e-16 79.7
MsG0280007470.01.T01 MTR_8g063440 25.857 321 203 11 4 301 12 320 5.00e-16 79.3
MsG0280007470.01.T01 MTR_1g115160 26.300 327 184 15 4 312 22 309 6.23e-16 79.0
MsG0280007470.01.T01 MTR_8g046310 25.610 328 191 12 1 301 13 314 7.10e-16 79.0
MsG0280007470.01.T01 MTR_1g055065 25.610 246 162 9 88 332 19 244 7.21e-16 77.8
MsG0280007470.01.T01 MTR_3g023930 25.159 314 183 11 4 307 34 305 7.28e-16 78.6
MsG0280007470.01.T01 MTR_4g117550 24.806 387 204 15 4 354 17 352 7.95e-16 78.6
MsG0280007470.01.T01 MTR_5g097330 26.347 334 196 13 6 301 18 339 7.96e-16 79.0
MsG0280007470.01.T01 MTR_4g006350 26.513 347 180 17 2 308 492 803 9.26e-16 79.7
MsG0280007470.01.T01 MTR_2g078850 27.019 322 161 18 7 297 33 311 1.00e-15 78.2
MsG0280007470.01.T01 MTR_5g046280 24.883 213 128 8 90 299 3 186 1.29e-15 76.6
MsG0280007470.01.T01 MTR_7g066080 27.976 336 177 16 4 299 16 326 1.29e-15 78.6
MsG0280007470.01.T01 MTR_7g017040 26.727 333 196 14 4 301 16 335 1.33e-15 78.2
MsG0280007470.01.T01 MTR_4g109280 25.833 360 208 15 4 347 8 324 1.41e-15 77.8
MsG0280007470.01.T01 MTR_3g010870 25.556 360 196 15 4 334 37 353 1.55e-15 77.8
MsG0280007470.01.T01 MTR_6g017280 22.626 358 234 12 4 335 9 349 1.62e-15 77.8
MsG0280007470.01.T01 MTR_2g025995 48.936 94 46 2 4 96 6 98 2.21e-15 75.5
MsG0280007470.01.T01 MTR_3g024150 25.079 315 178 11 7 299 38 316 2.37e-15 77.4
MsG0280007470.01.T01 MTR_5g057040 31.361 169 91 5 4 155 46 206 2.58e-15 78.6
MsG0280007470.01.T01 MTR_7g056260 23.739 337 181 8 4 299 14 315 2.68e-15 76.6
MsG0280007470.01.T01 MTR_6g080680 27.381 336 184 17 4 301 19 332 3.19e-15 77.0
MsG0280007470.01.T01 MTR_7g056570 29.412 340 151 18 4 299 18 312 3.25e-15 77.4
MsG0280007470.01.T01 MTR_3g030320 24.815 270 154 11 90 350 46 275 3.92e-15 75.9
MsG0280007470.01.T01 MTR_4g117770 26.667 315 183 12 4 299 11 296 4.88e-15 76.3
MsG0280007470.01.T01 MTR_4g117810 26.667 315 183 12 4 299 11 296 4.88e-15 76.3
MsG0280007470.01.T01 MTR_3g023940 24.857 350 205 11 4 333 34 345 4.97e-15 76.3
MsG0280007470.01.T01 MTR_7g060940 24.286 350 175 12 4 305 22 329 6.28e-15 76.3
MsG0280007470.01.T01 MTR_8g073550 30.622 209 103 8 4 194 30 214 6.31e-15 73.9
MsG0280007470.01.T01 MTR_7g056820 27.217 327 175 14 4 296 7 304 6.83e-15 75.9
MsG0280007470.01.T01 MTR_2g021950 24.850 334 202 12 4 301 16 336 6.88e-15 75.9
MsG0280007470.01.T01 MTR_0128s0070 23.242 327 192 10 2 296 20 319 7.73e-15 75.9
MsG0280007470.01.T01 MTR_4g129160 26.050 357 183 18 4 307 7 335 8.29e-15 75.5
MsG0280007470.01.T01 MTR_1g029650 24.642 349 188 14 2 308 6 321 8.52e-15 75.9
MsG0280007470.01.T01 MTR_5g057643 30.178 169 93 5 4 155 46 206 9.34e-15 74.3
MsG0280007470.01.T01 MTR_2g046800 26.801 347 170 15 4 299 14 327 1.04e-14 75.5
MsG0280007470.01.T01 MTR_4g011660 25.000 364 179 15 4 307 19 348 1.13e-14 75.5
MsG0280007470.01.T01 MTR_6g048140 24.648 426 216 19 1 379 36 403 1.24e-14 75.5
MsG0280007470.01.T01 MTR_4g030790 25.000 340 146 14 4 308 19 284 1.69e-14 74.3
MsG0280007470.01.T01 MTR_1g007450 24.372 398 249 16 4 368 12 390 1.72e-14 75.1
MsG0280007470.01.T01 MTR_3g010450 27.500 240 140 8 8 239 1 214 2.31e-14 72.8
MsG0280007470.01.T01 MTR_2g437190 59.494 79 27 4 46 121 56 132 2.44e-14 70.9
MsG0280007470.01.T01 MTR_4g013175 26.471 374 181 13 1 308 1 346 2.94e-14 74.3
MsG0280007470.01.T01 MTR_7g055930 25.743 404 204 17 4 338 13 389 3.21e-14 74.3
MsG0280007470.01.T01 MTR_5g056020 25.434 346 190 13 4 299 17 344 3.24e-14 74.3
MsG0280007470.01.T01 MTR_7g055870 24.877 406 205 15 4 338 13 389 3.74e-14 73.9
MsG0280007470.01.T01 MTR_5g059430 23.153 406 220 17 1 347 23 395 4.84e-14 73.6
MsG0280007470.01.T01 MTR_5g074850 24.740 384 225 14 7 350 38 397 4.91e-14 74.3
MsG0280007470.01.T01 MTR_7g091630 25.948 343 176 16 4 299 32 343 6.60e-14 73.2
MsG0280007470.01.T01 MTR_4g030760 26.814 317 175 14 4 299 73 353 6.95e-14 73.2
MsG0280007470.01.T01 MTR_3g058480 28.311 219 112 9 1 194 36 234 7.00e-14 72.4
MsG0280007470.01.T01 MTR_5g096710 27.523 327 175 15 4 296 23 321 7.25e-14 72.8
MsG0280007470.01.T01 MTR_7g016930 27.476 313 200 14 4 303 16 314 7.44e-14 72.4
MsG0280007470.01.T01 MTR_2g047200 26.822 343 167 14 4 299 20 325 7.69e-14 72.8
MsG0280007470.01.T01 MTR_7g079370 26.667 225 137 9 89 301 82 290 9.42e-14 72.4
MsG0280007470.01.T01 MTR_3g464500 24.556 338 181 12 2 299 25 328 9.95e-14 72.4
MsG0280007470.01.T01 MTR_5g075370 25.373 335 205 13 2 298 6 333 1.00e-13 73.2
MsG0280007470.01.T01 MTR_0129s0070 23.952 334 197 13 6 301 19 333 1.05e-13 72.4
MsG0280007470.01.T01 MTR_5g069390 23.018 391 231 14 1 347 23 387 1.18e-13 72.8
MsG0280007470.01.T01 MTR_5g068040 26.126 333 164 15 4 299 16 303 1.23e-13 72.0
MsG0280007470.01.T01 MTR_3g437520 26.765 340 189 15 4 299 23 346 1.25e-13 72.4
MsG0280007470.01.T01 MTR_2g066150 24.127 315 192 11 4 301 12 296 1.39e-13 72.0
MsG0280007470.01.T01 MTR_7g066850 25.225 333 179 15 4 299 23 322 2.21e-13 71.6
MsG0280007470.01.T01 MTR_7g079640 24.478 335 180 12 4 301 13 311 2.37e-13 71.2
MsG0280007470.01.T01 MTR_4g008790 28.291 357 165 18 1 296 30 356 2.88e-13 71.2
MsG0280007470.01.T01 MTR_6g461660 24.198 343 205 14 4 311 19 341 3.12e-13 70.9
MsG0280007470.01.T01 MTR_7g056503 24.100 361 217 13 4 332 21 356 3.15e-13 70.9
MsG0280007470.01.T01 MTR_7g061050 25.617 324 188 11 4 299 13 311 3.24e-13 70.9
MsG0280007470.01.T01 MTR_7g066840 22.703 370 212 9 4 334 23 357 3.77e-13 70.9
MsG0280007470.01.T01 MTR_7g069550 24.561 342 196 14 4 301 14 337 3.97e-13 70.9
MsG0280007470.01.T01 MTR_3g080370 24.765 319 186 13 18 300 35 335 5.07e-13 70.5
MsG0280007470.01.T01 MTR_3g464470 23.939 330 190 11 2 299 5 305 5.65e-13 70.1
MsG0280007470.01.T01 MTR_7g077970 24.000 350 182 14 4 299 7 326 9.55e-13 69.7
MsG0280007470.01.T01 MTR_1g055165 33.113 151 78 5 4 142 10 149 1.13e-12 68.6
MsG0280007470.01.T01 MTR_6g478230 24.638 345 186 13 4 301 27 344 1.14e-12 69.3
MsG0280007470.01.T01 MTR_2g048580 23.871 310 174 11 4 293 8 275 1.30e-12 68.6
MsG0280007470.01.T01 MTR_4g118380 25.767 326 184 10 4 295 8 309 1.31e-12 68.9
MsG0280007470.01.T01 MTR_7g056003 22.969 357 189 13 4 311 15 334 1.37e-12 68.9
MsG0280007470.01.T01 MTR_6g078010 27.869 244 128 12 76 301 59 272 1.44e-12 68.6
MsG0280007470.01.T01 MTR_2g066200 26.048 334 191 14 4 301 12 325 1.50e-12 68.9
MsG0280007470.01.T01 MTR_7g055987 25.159 314 176 13 7 293 23 304 1.79e-12 68.6
MsG0280007470.01.T01 MTR_7g066000 24.390 328 196 12 4 299 25 332 1.81e-12 68.6
MsG0280007470.01.T01 MTR_4g116330 25.705 319 141 13 4 299 23 268 2.29e-12 68.2
MsG0280007470.01.T01 MTR_7g061010 26.727 333 182 12 4 305 22 323 2.89e-12 68.2
MsG0280007470.01.T01 MTR_4g023440 24.127 315 151 10 4 299 18 263 2.90e-12 67.8
MsG0280007470.01.T01 MTR_5g069760 24.620 329 181 15 4 299 6 300 2.95e-12 67.8
MsG0280007470.01.T01 MTR_3g096250 29.341 167 98 4 4 156 47 207 2.97e-12 67.8
MsG0280007470.01.T01 MTR_7g062100 26.140 329 175 14 4 296 24 320 3.13e-12 67.8
MsG0280007470.01.T01 MTR_4g117750 29.538 325 163 16 4 299 3 290 3.37e-12 68.2
MsG0280007470.01.T01 MTR_8g013000 25.217 345 188 14 4 301 10 331 3.62e-12 67.8
MsG0280007470.01.T01 MTR_4g007940 27.451 255 148 10 68 301 41 279 3.77e-12 67.4
MsG0280007470.01.T01 MTR_7g056760 23.653 334 194 15 4 299 23 333 4.26e-12 67.4
MsG0280007470.01.T01 MTR_7g052150 23.353 334 182 12 4 299 22 319 4.88e-12 67.4
MsG0280007470.01.T01 MTR_4g121580 27.245 323 166 15 4 302 11 288 5.13e-12 67.4
MsG0280007470.01.T01 MTR_5g048160 23.977 342 198 11 1 299 1 323 8.05e-12 66.6
MsG0280007470.01.T01 MTR_5g097680 23.249 357 203 11 7 301 20 367 9.38e-12 66.6
MsG0280007470.01.T01 MTR_3g096280 23.856 306 163 11 16 300 17 273 9.65e-12 66.2
MsG0280007470.01.T01 MTR_2g104340 24.924 329 208 13 4 301 14 334 1.16e-11 66.2
MsG0280007470.01.T01 MTR_8g062660 23.810 357 210 14 4 335 22 341 1.17e-11 66.6
MsG0280007470.01.T01 MTR_0064s0160 23.796 353 186 12 1 301 39 360 1.27e-11 66.2
MsG0280007470.01.T01 MTR_6g017295 25.172 290 160 16 77 335 31 294 1.51e-11 66.2
MsG0280007470.01.T01 MTR_0129s0120 23.220 323 213 11 6 301 19 333 1.54e-11 65.9
MsG0280007470.01.T01 MTR_3g011650 27.753 227 130 7 7 222 82 285 1.78e-11 64.7
MsG0280007470.01.T01 MTR_4g134560 25.532 235 128 11 78 300 164 363 1.96e-11 65.9
MsG0280007470.01.T01 MTR_7g066010 24.722 360 221 14 4 347 21 346 2.04e-11 65.5
MsG0280007470.01.T01 MTR_4g116340 29.612 206 119 8 4 206 36 218 2.22e-11 63.9
MsG0280007470.01.T01 MTR_8g066440 26.301 365 180 20 4 316 23 350 2.45e-11 65.1
MsG0280007470.01.T01 MTR_2g078870 23.585 212 123 8 90 297 58 234 2.53e-11 64.7
MsG0280007470.01.T01 MTR_0097s0030 26.543 324 192 14 4 303 14 315 3.43e-11 64.7
MsG0280007470.01.T01 MTR_2g047240 26.543 324 192 14 4 303 14 315 3.43e-11 64.7
MsG0280007470.01.T01 MTR_3g058440 25.843 267 148 8 1 243 32 272 4.88e-11 63.5
MsG0280007470.01.T01 MTR_0128s0010 25.926 324 185 14 4 296 21 320 4.91e-11 64.3
MsG0280007470.01.T01 MTR_3g010440 33.824 136 71 5 4 123 26 158 5.66e-11 63.5
MsG0280007470.01.T01 MTR_7g111700 23.750 320 181 10 7 299 18 301 8.02e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007470.01.T01 AT4G12560 32.440 373 203 11 1 350 1 347 3.45e-50 174
MsG0280007470.01.T01 AT4G12560 32.440 373 203 11 1 350 1 347 3.45e-50 174
MsG0280007470.01.T01 AT4G12560 32.440 373 203 11 1 350 1 347 3.45e-50 174
MsG0280007470.01.T01 AT4G22390 30.189 371 211 13 1 350 1 344 1.14e-36 138
MsG0280007470.01.T01 AT4G22390 30.189 371 211 13 1 350 1 344 1.22e-36 137
MsG0280007470.01.T01 AT3G06240 26.389 432 217 18 4 380 36 421 2.78e-24 103
MsG0280007470.01.T01 AT3G23880 25.312 320 185 14 3 299 13 301 2.64e-17 83.2
MsG0280007470.01.T01 AT1G12870 24.458 323 193 15 2 299 31 327 3.64e-14 73.9
MsG0280007470.01.T01 AT3G17710 26.646 319 178 14 4 299 6 291 9.50e-13 69.3
MsG0280007470.01.T01 AT3G16210 24.026 308 185 11 4 302 5 272 1.23e-11 65.9
MsG0280007470.01.T01 AT3G23260 26.282 312 188 15 4 300 6 290 2.89e-11 64.7
MsG0280007470.01.T01 AT3G21410 25.000 308 201 11 4 303 38 323 5.32e-11 64.3

Find 90 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAATGAAATTGCTTTA+TGG 0.123031 2:-15901014 MsG0280007470.01.T01:CDS
CGAAATTAATGTTTCGCTTT+TGG 0.148533 2:-15900551 MsG0280007470.01.T01:CDS
GAGGCCATCTTTGAGGAAAT+TGG 0.200262 2:-15900416 MsG0280007470.01.T01:CDS
CTATCACCTTCCTTAATTAT+AGG 0.206381 2:-15900184 MsG0280007470.01.T01:CDS
AGGTTAATACGGCTGATATT+TGG 0.213456 2:-15900489 MsG0280007470.01.T01:CDS
AATTTATCACAGTGTATTTC+AGG 0.250797 2:+15900574 None:intergenic
TAAATCAATTTGGTAGAATT+CGG 0.271996 2:+15901137 None:intergenic
TACTTTCCATGAGTTCCTTT+TGG 0.282018 2:+15900756 None:intergenic
GGTTCTCCTTCCTATAATTA+AGG 0.282536 2:+15900174 None:intergenic
ATTTGGGTGATGAAAGAATA+TGG 0.299849 2:-15900472 MsG0280007470.01.T01:CDS
ACGATTAAACACTGTTGAAT+TGG 0.312325 2:+15900640 None:intergenic
ATTCCTGGAACAACACTAAT+AGG 0.328507 2:+15900247 None:intergenic
GGTTAATACGGCTGATATTT+GGG 0.334410 2:-15900488 MsG0280007470.01.T01:CDS
GTTTGATGTTTATTGATGTT+AGG 0.339718 2:+15900988 None:intergenic
TGTCAGTTATCAAACTAAAA+AGG 0.340587 2:-15900509 MsG0280007470.01.T01:CDS
TAGATTGTAGTAATCTGTTT+TGG 0.342341 2:-15900312 MsG0280007470.01.T01:CDS
AAGAAATTTAGTGGTGTTCC+AGG 0.348174 2:-15900274 MsG0280007470.01.T01:CDS
TGTTGAGAATTCTCTCCATT+TGG 0.365309 2:-15900683 MsG0280007470.01.T01:CDS
GAAGTTGTGGGAATCGATTA+AGG 0.373141 2:+15901215 None:intergenic
TTTGATGTTTATTGATGTTA+GGG 0.377598 2:+15900989 None:intergenic
TAAAGAGCGTATGGCATATT+GGG 0.379285 2:+15900730 None:intergenic
AAGTACCTAGATTCAGGAAA+AGG 0.388359 2:+15900952 None:intergenic
TTATCGAAACTAGGAATTCC+TGG 0.388951 2:+15900232 None:intergenic
CGAGAAAAGTACCTAGATTC+AGG 0.389002 2:+15900946 None:intergenic
TGATAGAAGTAAAATTCTAT+TGG 0.392570 2:-15900338 MsG0280007470.01.T01:CDS
AGGTAAACGGGAGAGAATTT+CGG 0.396869 2:+15901284 None:intergenic
AAACATGACGTAGTTCTTCT+CGG 0.398267 2:-15901069 MsG0280007470.01.T01:CDS
ATTCCTATTAGTGTTGTTCC+AGG 0.398338 2:-15900250 MsG0280007470.01.T01:CDS
AAATCAATTTGGTAGAATTC+GGG 0.398527 2:+15901138 None:intergenic
GTAAAGAGCGTATGGCATAT+TGG 0.401392 2:+15900729 None:intergenic
AGCAATTTCATTGAAGATGT+TGG 0.401928 2:+15901020 None:intergenic
AGGCCATCTTTGAGGAAATT+GGG 0.402461 2:-15900415 MsG0280007470.01.T01:CDS
AGTGTCCGGTTGTTGATTCA+TGG 0.407811 2:+15900807 None:intergenic
ATTTCACTCAACCATCATAT+AGG 0.408550 2:-15901096 MsG0280007470.01.T01:CDS
GATCTTCTGATGAGTTTGTA+AGG 0.414620 2:+15900841 None:intergenic
TTAGGTTAGGTAAATCAATT+TGG 0.414815 2:+15901127 None:intergenic
CTCAATAGTAAGAAATTTAG+TGG 0.425429 2:-15900283 MsG0280007470.01.T01:CDS
GGAGTGATTGTACAGGTAAA+CGG 0.434943 2:+15901271 None:intergenic
AACCTTGGACACCATCTTTG+AGG 0.435220 2:-15900378 MsG0280007470.01.T01:CDS
ATTCAGGAAAAGGGAGATAA+GGG 0.435546 2:+15900962 None:intergenic
ACAACACTAATAGGAATTCC+TGG 0.449048 2:+15900256 None:intergenic
TTACTTTGAGGCCATCTTTG+AGG 0.453122 2:-15900423 MsG0280007470.01.T01:CDS
AGAGAATGAGGTTGAGATTG+AGG 0.454309 2:+15901169 None:intergenic
GAAATGGTGGTGGTTAGGTT+AGG 0.458043 2:+15901114 None:intergenic
GTTCTTCTCGGTTCATGTAA+CGG 0.459510 2:-15901057 MsG0280007470.01.T01:CDS
TGAGTGAAATGGTGGTGGTT+AGG 0.460301 2:+15901109 None:intergenic
TCAATCTCAACCTCATTCTC+TGG 0.462743 2:-15901167 MsG0280007470.01.T01:CDS
GATTCAGGAAAAGGGAGATA+AGG 0.467022 2:+15900961 None:intergenic
AAGGAAGGTGATAGAAGGCT+TGG 0.467848 2:+15900193 None:intergenic
GAGTGATTGTACAGGTAAAC+GGG 0.482784 2:+15901272 None:intergenic
CTCTCCATTTGGTTGTGAGT+CGG 0.484476 2:-15900672 MsG0280007470.01.T01:CDS
GAGAATGAGGTTGAGATTGA+GGG 0.489156 2:+15901170 None:intergenic
GTTACACACCTTCGAAACCT+TGG 0.493527 2:-15900393 MsG0280007470.01.T01:CDS
TCAGCTCCAAAAGGAACTCA+TGG 0.494791 2:-15900762 MsG0280007470.01.T01:CDS
TCACAGTGTATTTCAGGAAG+AGG 0.499964 2:+15900580 None:intergenic
TAATTAAGGAAGGTGATAGA+AGG 0.506508 2:+15900188 None:intergenic
CGGTTGTTGATTCATGGTCA+CGG 0.512718 2:+15900813 None:intergenic
GGTGTAAATTGTTTACTTTG+AGG 0.512881 2:-15900435 MsG0280007470.01.T01:CDS
AGTACCTAGATTCAGGAAAA+GGG 0.513500 2:+15900953 None:intergenic
CGTGACCATGAATCAACAAC+CGG 0.514245 2:-15900812 MsG0280007470.01.T01:CDS
CGGGTCTGCGCCAGAGAATG+AGG 0.519856 2:+15901157 None:intergenic
CACCTTCCTTAATTATAGGA+AGG 0.522104 2:-15900180 MsG0280007470.01.T01:CDS
TTAATTATAGGAAGGAGAAC+CGG 0.524705 2:-15900172 MsG0280007470.01.T01:CDS
TAACCCAATTTCCTCAAAGA+TGG 0.526849 2:+15900412 None:intergenic
TTGGTTGTGAGTCGGAGACC+TGG 0.527770 2:-15900664 MsG0280007470.01.T01:CDS
ATTTCGGTTAACAAATCAGA+TGG 0.530445 2:+15901300 None:intergenic
TGAGACTCTTCAGCTCCAAA+AGG 0.532459 2:-15900771 MsG0280007470.01.T01:CDS
ACCTGCGATTCAAAAGTGTC+CGG 0.535403 2:+15900793 None:intergenic
GTCTCCGACTCACAACCAAA+TGG 0.538434 2:+15900668 None:intergenic
TATTGCATTTCAACTTGTGC+CGG 0.538780 2:+15900153 None:intergenic
TAACATAAAAGCCTCAAAGA+TGG 0.539277 2:+15900367 None:intergenic
GGTTGTTGATTCATGGTCAC+GGG 0.540303 2:+15900814 None:intergenic
GTGAAGGTTGGTGAAGTTGT+GGG 0.548394 2:+15901203 None:intergenic
GATGGTGTCCAAGGTTTCGA+AGG 0.556596 2:+15900385 None:intergenic
CTCCTTCCTATAATTAAGGA+AGG 0.556923 2:+15900178 None:intergenic
TCATCATTGTAAAGAGCGTA+TGG 0.558878 2:+15900721 None:intergenic
AGCCTCAAAGATGGTGTCCA+AGG 0.564395 2:+15900376 None:intergenic
GGTGAAGGTTGGTGAAGTTG+TGG 0.565045 2:+15901202 None:intergenic
TATATGATGGTTGAGTGAAA+TGG 0.567161 2:+15901098 None:intergenic
ATGGTTGAGTGAAATGGTGG+TGG 0.578406 2:+15901104 None:intergenic
TCAGATGGAAGATCAGCCAT+TGG 0.579495 2:+15901315 None:intergenic
CATGTTTGTAACCTATATGA+TGG 0.581431 2:+15901085 None:intergenic
AATATGGATTGAGAGATAGT+TGG 0.590674 2:-15900456 MsG0280007470.01.T01:CDS
AACATGGCTTTATCGAAACT+AGG 0.608457 2:+15900223 None:intergenic
AATCGGAGGAGTGATTGTAC+AGG 0.616982 2:+15901264 None:intergenic
ATGATGGTTGAGTGAAATGG+TGG 0.625275 2:+15901101 None:intergenic
AAACACTGTTGAATTGGACC+AGG 0.627187 2:+15900646 None:intergenic
AAGGCTTGGAACGCAAAACA+TGG 0.630449 2:+15900207 None:intergenic
TTGAAGTTGATCGAAATCGG+AGG 0.634772 2:+15901250 None:intergenic
AGTTTGTAATCTCCTGCGAA+CGG 0.645427 2:+15900880 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATCAATTTGGTAGAATT+CGG + Chr2:15900340-15900359 None:intergenic 20.0%
!! TCAAACTAAAAAGGTTAATA+CGG - Chr2:15900974-15900993 MsG0280007470.01.T01:CDS 20.0%
!! TGATAGAAGTAAAATTCTAT+TGG - Chr2:15901136-15901155 MsG0280007470.01.T01:CDS 20.0%
!! TTTGATGTTTATTGATGTTA+GGG + Chr2:15900488-15900507 None:intergenic 20.0%
! AAATCAATTTGGTAGAATTC+GGG + Chr2:15900339-15900358 None:intergenic 25.0%
! AATTTATCACAGTGTATTTC+AGG + Chr2:15900903-15900922 None:intergenic 25.0%
! CTCAATAGTAAGAAATTTAG+TGG - Chr2:15901191-15901210 MsG0280007470.01.T01:CDS 25.0%
! GTTTGATGTTTATTGATGTT+AGG + Chr2:15900489-15900508 None:intergenic 25.0%
! TCTTCAATGAAATTGCTTTA+TGG - Chr2:15900460-15900479 MsG0280007470.01.T01:CDS 25.0%
! TGTCAGTTATCAAACTAAAA+AGG - Chr2:15900965-15900984 MsG0280007470.01.T01:CDS 25.0%
! TTAGGTTAGGTAAATCAATT+TGG + Chr2:15900350-15900369 None:intergenic 25.0%
!! TAGATTGTAGTAATCTGTTT+TGG - Chr2:15901162-15901181 MsG0280007470.01.T01:CDS 25.0%
!!! AATATCATTTTTCACGGTTT+CGG - Chr2:15900564-15900583 MsG0280007470.01.T01:CDS 25.0%
!!! ATTTTGAAGTTGATCGAAAT+CGG + Chr2:15900230-15900249 None:intergenic 25.0%
!!! GAAATTAATGTTTCGCTTTT+GGG - Chr2:15900924-15900943 MsG0280007470.01.T01:CDS 25.0%
ACGATTAAACACTGTTGAAT+TGG + Chr2:15900837-15900856 None:intergenic 30.0%
AGCAATTTCATTGAAGATGT+TGG + Chr2:15900457-15900476 None:intergenic 30.0%
ATTTCACTCAACCATCATAT+AGG - Chr2:15900378-15900397 MsG0280007470.01.T01:CDS 30.0%
ATTTCGGTTAACAAATCAGA+TGG + Chr2:15900177-15900196 None:intergenic 30.0%
ATTTGGGTGATGAAAGAATA+TGG - Chr2:15901002-15901021 MsG0280007470.01.T01:CDS 30.0%
CATGTTTGTAACCTATATGA+TGG + Chr2:15900392-15900411 None:intergenic 30.0%
CTATCACCTTCCTTAATTAT+AGG - Chr2:15901290-15901309 MsG0280007470.01.T01:CDS 30.0%
GGTGTAAATTGTTTACTTTG+AGG - Chr2:15901039-15901058 MsG0280007470.01.T01:CDS 30.0%
TAACATAAAAGCCTCAAAGA+TGG + Chr2:15901110-15901129 None:intergenic 30.0%
TAATTAAGGAAGGTGATAGA+AGG + Chr2:15901289-15901308 None:intergenic 30.0%
TATATGATGGTTGAGTGAAA+TGG + Chr2:15900379-15900398 None:intergenic 30.0%
TTAATTATAGGAAGGAGAAC+CGG - Chr2:15901302-15901321 MsG0280007470.01.T01:CDS 30.0%
! AACACACGAAATTTTTAACG+AGG - Chr2:15900869-15900888 MsG0280007470.01.T01:CDS 30.0%
! AATATGGATTGAGAGATAGT+TGG - Chr2:15901018-15901037 MsG0280007470.01.T01:CDS 30.0%
! CGAAATTAATGTTTCGCTTT+TGG - Chr2:15900923-15900942 MsG0280007470.01.T01:CDS 30.0%
AAACATGACGTAGTTCTTCT+CGG - Chr2:15900405-15900424 MsG0280007470.01.T01:CDS 35.0%
AAGAAATTTAGTGGTGTTCC+AGG - Chr2:15901200-15901219 MsG0280007470.01.T01:CDS 35.0%
AAGTACCTAGATTCAGGAAA+AGG + Chr2:15900525-15900544 None:intergenic 35.0%
ACAACACTAATAGGAATTCC+TGG + Chr2:15901221-15901240 None:intergenic 35.0%
AGGTTAATACGGCTGATATT+TGG - Chr2:15900985-15901004 MsG0280007470.01.T01:CDS 35.0%
AGTACCTAGATTCAGGAAAA+GGG + Chr2:15900524-15900543 None:intergenic 35.0%
ATTCAGGAAAAGGGAGATAA+GGG + Chr2:15900515-15900534 None:intergenic 35.0%
ATTCCTGGAACAACACTAAT+AGG + Chr2:15901230-15901249 None:intergenic 35.0%
CACCTTCCTTAATTATAGGA+AGG - Chr2:15901294-15901313 MsG0280007470.01.T01:CDS 35.0%
CTCCTTCCTATAATTAAGGA+AGG + Chr2:15901299-15901318 None:intergenic 35.0%
GATCTTCTGATGAGTTTGTA+AGG + Chr2:15900636-15900655 None:intergenic 35.0%
GGTTAATACGGCTGATATTT+GGG - Chr2:15900986-15901005 MsG0280007470.01.T01:CDS 35.0%
GGTTCTCCTTCCTATAATTA+AGG + Chr2:15901303-15901322 None:intergenic 35.0%
TAACCCAATTTCCTCAAAGA+TGG + Chr2:15901065-15901084 None:intergenic 35.0%
TGTTGAGAATTCTCTCCATT+TGG - Chr2:15900791-15900810 MsG0280007470.01.T01:CDS 35.0%
TTATCGAAACTAGGAATTCC+TGG + Chr2:15901245-15901264 None:intergenic 35.0%
! ATTCCTATTAGTGTTGTTCC+AGG - Chr2:15901224-15901243 MsG0280007470.01.T01:CDS 35.0%
! TAAAGAGCGTATGGCATATT+GGG + Chr2:15900747-15900766 None:intergenic 35.0%
! TACTTTCCATGAGTTCCTTT+TGG + Chr2:15900721-15900740 None:intergenic 35.0%
! TCATCATTGTAAAGAGCGTA+TGG + Chr2:15900756-15900775 None:intergenic 35.0%
!! AACATGGCTTTATCGAAACT+AGG + Chr2:15901254-15901273 None:intergenic 35.0%
AAACACTGTTGAATTGGACC+AGG + Chr2:15900831-15900850 None:intergenic 40.0%
AGAGAATGAGGTTGAGATTG+AGG + Chr2:15900308-15900327 None:intergenic 40.0%
AGGTAAACGGGAGAGAATTT+CGG + Chr2:15900193-15900212 None:intergenic 40.0%
AGTTTGTAATCTCCTGCGAA+CGG + Chr2:15900597-15900616 None:intergenic 40.0%
ATGATGGTTGAGTGAAATGG+TGG + Chr2:15900376-15900395 None:intergenic 40.0%
GAAAAATGATATTCCCCCCT+GGG + Chr2:15900557-15900576 None:intergenic 40.0%
GAAGTTGTGGGAATCGATTA+AGG + Chr2:15900262-15900281 None:intergenic 40.0%
GAGAATGAGGTTGAGATTGA+GGG + Chr2:15900307-15900326 None:intergenic 40.0%
GAGTGATTGTACAGGTAAAC+GGG + Chr2:15900205-15900224 None:intergenic 40.0%
GATTCAGGAAAAGGGAGATA+AGG + Chr2:15900516-15900535 None:intergenic 40.0%
GGAGTGATTGTACAGGTAAA+CGG + Chr2:15900206-15900225 None:intergenic 40.0%
GTTCTTCTCGGTTCATGTAA+CGG - Chr2:15900417-15900436 MsG0280007470.01.T01:CDS 40.0%
TCAATCTCAACCTCATTCTC+TGG - Chr2:15900307-15900326 MsG0280007470.01.T01:CDS 40.0%
TCACAGTGTATTTCAGGAAG+AGG + Chr2:15900897-15900916 None:intergenic 40.0%
TGAAAAATGATATTCCCCCC+TGG + Chr2:15900558-15900577 None:intergenic 40.0%
! AGGCCATCTTTGAGGAAATT+GGG - Chr2:15901059-15901078 MsG0280007470.01.T01:CDS 40.0%
! ATCTCCCTTTTCCTGAATCT+AGG - Chr2:15900517-15900536 MsG0280007470.01.T01:CDS 40.0%
! GTAAAGAGCGTATGGCATAT+TGG + Chr2:15900748-15900767 None:intergenic 40.0%
! TGAGATTGAGGGAGTTTTTG+AGG + Chr2:15900296-15900315 None:intergenic 40.0%
! TTGAAGTTGATCGAAATCGG+AGG + Chr2:15900227-15900246 None:intergenic 40.0%
!! CGAGAAAAGTACCTAGATTC+AGG + Chr2:15900531-15900550 None:intergenic 40.0%
!! GGGGGGAATATCATTTTTCA+CGG - Chr2:15900558-15900577 MsG0280007470.01.T01:CDS 40.0%
!! TTACTTTGAGGCCATCTTTG+AGG - Chr2:15901051-15901070 MsG0280007470.01.T01:CDS 40.0%
AACCTTGGACACCATCTTTG+AGG - Chr2:15901096-15901115 MsG0280007470.01.T01:CDS 45.0%
AAGGAAGGTGATAGAAGGCT+TGG + Chr2:15901284-15901303 None:intergenic 45.0%
AAGGCTTGGAACGCAAAACA+TGG + Chr2:15901270-15901289 None:intergenic 45.0%
AATCGGAGGAGTGATTGTAC+AGG + Chr2:15900213-15900232 None:intergenic 45.0%
ATGGTTGAGTGAAATGGTGG+TGG + Chr2:15900373-15900392 None:intergenic 45.0%
CGTGACCATGAATCAACAAC+CGG - Chr2:15900662-15900681 MsG0280007470.01.T01:CDS 45.0%
CTCTCCATTTGGTTGTGAGT+CGG - Chr2:15900802-15900821 MsG0280007470.01.T01:CDS 45.0%
GTTACACACCTTCGAAACCT+TGG - Chr2:15901081-15901100 MsG0280007470.01.T01:CDS 45.0%
TCAGCTCCAAAAGGAACTCA+TGG - Chr2:15900712-15900731 MsG0280007470.01.T01:CDS 45.0%
TGAGACTCTTCAGCTCCAAA+AGG - Chr2:15900703-15900722 MsG0280007470.01.T01:CDS 45.0%
! GAGGCCATCTTTGAGGAAAT+TGG - Chr2:15901058-15901077 MsG0280007470.01.T01:CDS 45.0%
!! ACCTGCGATTCAAAAGTGTC+CGG + Chr2:15900684-15900703 None:intergenic 45.0%
!! AGTGTCCGGTTGTTGATTCA+TGG + Chr2:15900670-15900689 None:intergenic 45.0%
!! CGGTTGTTGATTCATGGTCA+CGG + Chr2:15900664-15900683 None:intergenic 45.0%
!! GAAATGGTGGTGGTTAGGTT+AGG + Chr2:15900363-15900382 None:intergenic 45.0%
!! GGTTGTTGATTCATGGTCAC+GGG + Chr2:15900663-15900682 None:intergenic 45.0%
!! GTGAAGGTTGGTGAAGTTGT+GGG + Chr2:15900274-15900293 None:intergenic 45.0%
!! TGAGTGAAATGGTGGTGGTT+AGG + Chr2:15900368-15900387 None:intergenic 45.0%
!!! GGAGTTTTTGAGGTGAAGGT+TGG + Chr2:15900286-15900305 None:intergenic 45.0%
!!! TGAGGGAGTTTTTGAGGTGA+AGG + Chr2:15900290-15900309 None:intergenic 45.0%
AAATGATATTCCCCCCTGGG+AGG + Chr2:15900554-15900573 None:intergenic 50.0%
AGCCTCAAAGATGGTGTCCA+AGG + Chr2:15901101-15901120 None:intergenic 50.0%
GATGGTGTCCAAGGTTTCGA+AGG + Chr2:15901092-15901111 None:intergenic 50.0%
GTCTCCGACTCACAACCAAA+TGG + Chr2:15900809-15900828 None:intergenic 50.0%
! ACCGGACACTTTTGAATCGC+AGG - Chr2:15900680-15900699 MsG0280007470.01.T01:CDS 50.0%
!! GGTGAAGGTTGGTGAAGTTG+TGG + Chr2:15900275-15900294 None:intergenic 50.0%
!! TTCGGTTTTGATCCGTTCGC+AGG - Chr2:15900582-15900601 MsG0280007470.01.T01:CDS 50.0%
TTGGTTGTGAGTCGGAGACC+TGG - Chr2:15900810-15900829 MsG0280007470.01.T01:CDS 55.0%
! AGGTACTTTTCTCGCCTCCC+AGG - Chr2:15900537-15900556 MsG0280007470.01.T01:CDS 55.0%
! GGTACTTTTCTCGCCTCCCA+GGG - Chr2:15900538-15900557 MsG0280007470.01.T01:CDS 55.0%
! GTACTTTTCTCGCCTCCCAG+GGG - Chr2:15900539-15900558 MsG0280007470.01.T01:CDS 55.0%
! TACTTTTCTCGCCTCCCAGG+GGG - Chr2:15900540-15900559 MsG0280007470.01.T01:CDS 55.0%
! ACTTTTCTCGCCTCCCAGGG+GGG - Chr2:15900541-15900560 MsG0280007470.01.T01:CDS 60.0%
CGGGTCTGCGCCAGAGAATG+AGG + Chr2:15900320-15900339 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15900162 15901334 15900162 ID=MsG0280007470.01;Name=MsG0280007470.01
Chr2 mRNA 15900162 15901334 15900162 ID=MsG0280007470.01.T01;Parent=MsG0280007470.01;Name=MsG0280007470.01.T01;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|390
Chr2 exon 15900162 15901334 15900162 ID=MsG0280007470.01.T01:exon:4199;Parent=MsG0280007470.01.T01
Chr2 CDS 15900162 15901334 15900162 ID=MsG0280007470.01.T01:cds;Parent=MsG0280007470.01.T01
Gene Sequence

>MsG0280007470.01.T01

ATGGCTGATCTTCCATCTGATTTGTTAACCGAAATTCTCTCCCGTTTACCTGTACAATCACTCCTCCGATTTCGATCAACTTCAAAATCACTTAAATCCTTAATCGATTCCCACAACTTCACCAACCTTCACCTCAAAAACTCCCTCAATCTCAACCTCATTCTCTGGCGCAGACCCGAATTCTACCAAATTGATTTACCTAACCTAACCACCACCATTTCACTCAACCATCATATAGGTTACAAACATGACGTAGTTCTTCTCGGTTCATGTAACGGTCTTCTCTGTATCTCCAACATCTTCAATGAAATTGCTTTATGGAACCCTAACATCAATAAACATCAAACTATCCCTTATCTCCCTTTTCCTGAATCTAGGTACTTTTCTCGCCTCCCAGGGGGGAATATCATTTTTCACGGTTTCGGTTTTGATCCGTTCGCAGGAGATTACAAACTCATCAGAATATCATGTCCTTACAAACTCATCAGAAGATCATGTCCCGTGACCATGAATCAACAACCGGACACTTTTGAATCGCAGGTGAGACTCTTCAGCTCCAAAAGGAACTCATGGAAAGTACTTCCCAATATGCCATACGCTCTTTACAATGATGATGACATGAATGTTGCTGTTGAGAATTCTCTCCATTTGGTTGTGAGTCGGAGACCTGGTCCAATTCAACAGTGTTTAATCGTCGCGTTTAATCTAACACACGAAATTTTTAACGAGGTTCCTCTTCCTGAAATACACTGTGATAAATTCGAAATTAATGTTTCGCTTTTGGGAGAGTGTCTTTGTATGACTGTCAGTTATCAAACTAAAAAGGTTAATACGGCTGATATTTGGGTGATGAAAGAATATGGATTGAGAGATAGTTGGTGTAAATTGTTTACTTTGAGGCCATCTTTGAGGAAATTGGGTTACACACCTTCGAAACCTTGGACACCATCTTTGAGGCTTTTATGTTATTCTAGTGATAGAAGTAAAATTCTATTGGAAGTAGATTGTAGTAATCTGTTTTGGTATGATCTCAATAGTAAGAAATTTAGTGGTGTTCCAGGAATTCCTATTAGTGTTGTTCCAGGAATTCCTAGTTTCGATAAAGCCATGTTTTGCGTTCCAAGCCTTCTATCACCTTCCTTAATTATAGGAAGGAGAACCGGCACAAGTTGA
Protein sequence

>MsG0280007470.01.T01

MADLPSDLLTEILSRLPVQSLLRFRSTSKSLKSLIDSHNFTNLHLKNSLNLNLILWRRPEFYQIDLPNLTTTISLNHHIGYKHDVVLLGSCNGLLCISNIFNEIALWNPNINKHQTIPYLPFPESRYFSRLPGGNIIFHGFGFDPFAGDYKLIRISCPYKLIRRSCPVTMNQQPDTFESQVRLFSSKRNSWKVLPNMPYALYNDDDMNVAVENSLHLVVSRRPGPIQQCLIVAFNLTHEIFNEVPLPEIHCDKFEINVSLLGECLCMTVSYQTKKVNTADIWVMKEYGLRDSWCKLFTLRPSLRKLGYTPSKPWTPSLRLLCYSSDRSKILLEVDCSNLFWYDLNSKKFSGVPGIPISVVPGIPSFDKAMFCVPSLLSPSLIIGRRTGTS*