AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007581.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007581.01.T01 MTR_2g028130 94.098 305 16 2 1 303 102 406 0.0 591
MsG0280007581.01.T01 MTR_2g028160 70.219 319 91 3 1 315 102 420 9.90e-161 455
MsG0280007581.01.T01 MTR_0667s0010 71.340 321 85 6 1 315 90 409 2.72e-159 451
MsG0280007581.01.T01 MTR_2g028140 68.111 323 88 7 1 315 103 418 6.70e-152 432
MsG0280007581.01.T01 MTR_3g083010 66.032 315 97 5 1 307 104 416 1.71e-145 416
MsG0280007581.01.T01 MTR_2g426070 68.387 310 85 4 1 307 101 400 2.94e-145 415
MsG0280007581.01.T01 MTR_2g025420 67.183 323 94 7 3 315 104 424 4.61e-145 415
MsG0280007581.01.T01 MTR_2g024100 68.153 314 94 4 1 308 92 405 3.33e-144 412
MsG0280007581.01.T01 MTR_2g426020 67.524 311 90 6 1 307 96 399 1.70e-142 408
MsG0280007581.01.T01 MTR_2g426090 65.749 327 90 7 1 315 96 412 5.57e-141 404
MsG0280007581.01.T01 MTR_2g025960 64.839 310 97 6 1 303 1 305 3.16e-139 396
MsG0280007581.01.T01 MTR_2g426060 64.815 324 96 8 1 315 95 409 1.49e-137 395
MsG0280007581.01.T01 MTR_4g070550 63.975 322 94 8 1 315 97 403 2.19e-136 392
MsG0280007581.01.T01 MTR_2g425980 64.423 312 98 6 2 307 95 399 3.59e-132 382
MsG0280007581.01.T01 MTR_2g028110 62.951 305 97 5 1 303 86 376 1.35e-130 377
MsG0280007581.01.T01 MTR_1g068875 62.461 317 94 6 1 315 87 380 3.91e-125 363
MsG0280007581.01.T01 MTR_2g031640 60.065 308 101 5 1 303 88 378 4.28e-125 363
MsG0280007581.01.T01 MTR_8g099460 62.154 325 103 5 1 315 89 403 6.08e-124 361
MsG0280007581.01.T01 MTR_1g068835 59.748 318 102 6 1 315 87 381 1.46e-123 359
MsG0280007581.01.T01 MTR_2g031720 57.764 322 108 8 3 315 94 396 3.85e-121 353
MsG0280007581.01.T01 MTR_2g031680 59.375 320 108 6 1 315 87 389 1.37e-117 344
MsG0280007581.01.T01 MTR_2g021050 59.375 320 88 7 1 307 91 381 4.89e-117 342
MsG0280007581.01.T01 MTR_2g026010 56.667 330 111 7 1 315 86 398 9.37e-117 342
MsG0280007581.01.T01 MTR_1g068860 57.792 308 102 7 1 303 87 371 2.18e-109 323
MsG0280007581.01.T01 MTR_2g024110 54.576 295 113 6 3 291 91 370 2.72e-103 307
MsG0280007581.01.T01 MTR_4g006270 42.675 314 135 8 1 299 85 368 1.07e-73 233
MsG0280007581.01.T01 MTR_4g133170 40.244 328 162 9 1 315 86 392 6.26e-72 228
MsG0280007581.01.T01 MTR_2g037520 70.779 154 41 2 120 272 1 151 2.11e-68 211
MsG0280007581.01.T01 MTR_1g068905 44.918 305 81 9 1 303 87 306 2.51e-63 203
MsG0280007581.01.T01 MTR_2g040050 40.928 237 100 5 1 230 38 241 6.94e-52 171
MsG0280007581.01.T01 MTR_2g025440 65.891 129 42 2 176 303 3 130 1.82e-51 169
MsG0280007581.01.T01 MTR_2g031700 52.229 157 65 1 1 157 87 233 2.98e-48 163
MsG0280007581.01.T01 MTR_2g031700 75.439 57 13 1 247 303 232 287 4.73e-21 91.7
MsG0280007581.01.T01 MTR_5g083940 42.125 273 90 10 1 267 64 274 1.38e-46 160
MsG0280007581.01.T01 MTR_3g086960 52.564 156 61 5 139 288 5 153 5.87e-42 142
MsG0280007581.01.T01 MTR_7g110360 59.836 122 48 1 167 287 199 320 2.92e-40 143
MsG0280007581.01.T01 MTR_3g024130 33.488 215 119 5 2 213 57 250 2.45e-30 117
MsG0280007581.01.T01 MTR_3g014570 29.758 289 169 9 3 286 121 380 1.67e-26 108
MsG0280007581.01.T01 MTR_1g097560 29.825 285 161 13 3 286 129 375 2.10e-26 107
MsG0280007581.01.T01 MTR_7g407070 32.589 224 123 7 2 214 132 338 2.98e-26 107
MsG0280007581.01.T01 MTR_3g006670 32.710 214 120 8 3 213 144 336 2.11e-25 105
MsG0280007581.01.T01 MTR_3g010390 30.000 280 160 11 3 269 134 390 4.50e-25 104
MsG0280007581.01.T01 MTR_6g004660 33.488 215 122 9 3 213 117 314 5.79e-25 103
MsG0280007581.01.T01 MTR_3g009310 30.420 286 164 12 3 285 138 391 7.80e-25 103
MsG0280007581.01.T01 MTR_2g021150 28.920 287 170 10 3 285 113 369 2.25e-24 102
MsG0280007581.01.T01 MTR_3g009260 30.841 214 126 6 1 214 128 319 2.55e-24 102
MsG0280007581.01.T01 MTR_3g014540 32.870 216 119 9 3 213 121 315 3.69e-24 101
MsG0280007581.01.T01 MTR_2g028120 65.385 78 18 3 227 303 7 76 4.05e-24 94.0
MsG0280007581.01.T01 MTR_3g009300 30.068 296 159 13 3 287 97 355 4.43e-24 100
MsG0280007581.01.T01 MTR_7g110370 57.303 89 35 2 157 244 16 102 4.49e-24 98.2
MsG0280007581.01.T01 MTR_3g436150 31.731 208 128 5 11 213 133 331 6.25e-24 100
MsG0280007581.01.T01 MTR_3g013770 32.653 245 132 10 3 240 132 350 6.56e-24 100
MsG0280007581.01.T01 MTR_3g009240 29.730 259 159 9 29 285 146 383 7.13e-24 100
MsG0280007581.01.T01 MTR_3g007330 33.023 215 118 9 3 213 135 327 1.61e-23 99.8
MsG0280007581.01.T01 MTR_8g054320 30.712 267 134 9 29 285 76 301 1.90e-23 98.2
MsG0280007581.01.T01 MTR_6g060650 31.466 232 133 9 6 234 113 321 2.63e-23 99.0
MsG0280007581.01.T01 MTR_3g036290 29.439 214 117 6 2 215 116 295 2.02e-22 96.3
MsG0280007581.01.T01 MTR_3g007270 31.132 212 127 8 3 213 150 343 2.15e-22 97.1
MsG0280007581.01.T01 MTR_6g021880 30.034 293 166 14 3 285 119 382 3.51e-22 95.9
MsG0280007581.01.T01 MTR_6g065980 30.049 203 117 7 11 213 109 286 4.84e-22 95.5
MsG0280007581.01.T01 MTR_3g024040 28.920 287 170 13 3 287 121 375 4.85e-22 95.5
MsG0280007581.01.T01 MTR_3g010920 30.769 260 138 10 1 260 138 355 6.52e-22 95.1
MsG0280007581.01.T01 MTR_7g013590 28.440 218 130 7 3 213 126 324 1.36e-21 94.7
MsG0280007581.01.T01 MTR_1g097490 29.278 263 152 9 3 265 142 370 1.51e-21 94.4
MsG0280007581.01.T01 MTR_2g029990 28.436 211 131 6 3 213 148 338 2.12e-21 94.0
MsG0280007581.01.T01 MTR_4g023120 30.638 235 128 10 5 231 98 305 2.26e-21 93.6
MsG0280007581.01.T01 MTR_3g007430 29.817 218 129 8 1 213 130 328 2.39e-21 93.6
MsG0280007581.01.T01 MTR_3g030350 27.437 277 170 12 4 277 130 378 2.84e-21 93.6
MsG0280007581.01.T01 MTR_8g101580 29.104 268 157 12 28 287 155 397 2.85e-21 93.6
MsG0280007581.01.T01 MTR_3g034180 31.429 210 118 7 16 213 224 419 4.55e-21 93.6
MsG0280007581.01.T01 MTR_3g007360 28.522 291 166 15 3 283 143 401 5.18e-21 92.8
MsG0280007581.01.T01 MTR_0044s0300 28.223 287 169 13 4 285 136 390 5.19e-21 92.8
MsG0280007581.01.T01 MTR_5g009060 28.289 304 155 13 3 287 142 401 6.71e-21 92.4
MsG0280007581.01.T01 MTR_5g046280 26.374 273 174 11 16 285 6 254 7.73e-21 90.1
MsG0280007581.01.T01 MTR_6g027910 27.458 295 178 14 1 285 107 375 8.57e-21 92.0
MsG0280007581.01.T01 MTR_4g055060 28.276 290 180 8 2 287 124 389 8.98e-21 92.0
MsG0280007581.01.T01 MTR_4g117720 30.342 234 136 9 5 234 110 320 8.99e-21 92.0
MsG0280007581.01.T01 MTR_6g053260 30.047 213 127 8 2 213 433 624 9.21e-21 93.2
MsG0280007581.01.T01 MTR_2g046830 27.636 275 160 11 3 271 120 361 1.08e-20 92.0
MsG0280007581.01.T01 MTR_6g007150 27.517 298 177 11 1 285 67 338 1.21e-20 91.3
MsG0280007581.01.T01 MTR_1g097330 28.996 269 160 11 2 267 106 346 1.52e-20 91.7
MsG0280007581.01.T01 MTR_5g046300 25.830 271 178 9 16 285 103 351 1.55e-20 90.9
MsG0280007581.01.T01 MTR_5g046290 25.830 271 178 9 16 285 103 351 1.55e-20 90.9
MsG0280007581.01.T01 MTR_3g007410 28.179 291 167 15 3 283 143 401 1.88e-20 91.3
MsG0280007581.01.T01 MTR_5g011200 26.996 263 161 8 3 262 115 349 2.32e-20 90.9
MsG0280007581.01.T01 MTR_3g034160 27.686 242 138 9 1 229 102 319 2.58e-20 90.5
MsG0280007581.01.T01 MTR_6g017305 26.014 296 172 12 20 286 6 283 2.80e-20 89.4
MsG0280007581.01.T01 MTR_2g021190 29.224 219 121 7 3 213 116 308 3.46e-20 90.1
MsG0280007581.01.T01 MTR_6g004210 27.273 286 166 12 3 270 129 390 3.64e-20 90.5
MsG0280007581.01.T01 MTR_8g046310 27.869 244 139 11 31 267 141 354 4.19e-20 90.1
MsG0280007581.01.T01 MTR_1g050542 29.907 214 125 7 2 213 145 335 5.16e-20 90.1
MsG0280007581.01.T01 MTR_6g080680 27.451 255 154 10 24 266 135 370 5.17e-20 90.1
MsG0280007581.01.T01 MTR_3g006570 28.269 283 177 10 6 285 118 377 6.65e-20 89.4
MsG0280007581.01.T01 MTR_6g053240 29.167 216 130 7 2 213 124 320 7.12e-20 89.7
MsG0280007581.01.T01 MTR_4g023090 25.914 301 184 12 5 293 112 385 7.48e-20 89.4
MsG0280007581.01.T01 MTR_5g096630 24.812 266 161 10 28 268 142 393 7.52e-20 89.7
MsG0280007581.01.T01 MTR_2g021155 31.163 215 123 7 3 213 128 321 7.82e-20 90.5
MsG0280007581.01.T01 MTR_2g021155 31.839 223 135 9 31 246 711 923 7.10e-19 87.8
MsG0280007581.01.T01 MTR_7g009265 27.632 228 135 9 3 214 31 244 1.25e-19 88.2
MsG0280007581.01.T01 MTR_2g046860 27.007 274 162 11 3 268 7 250 1.26e-19 87.8
MsG0280007581.01.T01 MTR_4g116330 29.237 236 137 11 7 234 113 326 1.36e-19 88.6
MsG0280007581.01.T01 MTR_2g078900 28.500 200 119 6 16 213 136 313 1.67e-19 88.2
MsG0280007581.01.T01 MTR_4g023070 30.213 235 129 10 5 231 98 305 2.15e-19 87.8
MsG0280007581.01.T01 MTR_4g061340 27.551 294 168 13 3 285 117 376 2.42e-19 87.8
MsG0280007581.01.T01 MTR_5g007610 32.127 221 125 8 3 214 133 337 2.63e-19 88.2
MsG0280007581.01.T01 MTR_3g010590 28.452 239 134 11 31 264 157 363 3.83e-19 87.4
MsG0280007581.01.T01 MTR_3g011060 27.935 247 144 9 3 240 130 351 5.08e-19 87.0
MsG0280007581.01.T01 MTR_4g130330 28.899 218 135 7 15 213 109 325 5.60e-19 87.0
MsG0280007581.01.T01 MTR_4g028510 24.286 280 186 8 22 282 129 401 7.99e-19 87.0
MsG0280007581.01.T01 MTR_2g078870 26.429 280 174 9 11 285 56 308 8.56e-19 85.5
MsG0280007581.01.T01 MTR_5g057710 31.132 212 122 9 4 213 141 330 8.67e-19 86.7
MsG0280007581.01.T01 MTR_1g054725 29.954 217 119 8 3 210 115 307 1.55e-18 85.5
MsG0280007581.01.T01 MTR_7g007300 28.920 287 158 12 6 285 199 446 1.87e-18 85.9
MsG0280007581.01.T01 MTR_3g030320 27.969 261 158 12 4 260 37 271 1.91e-18 84.3
MsG0280007581.01.T01 MTR_3g034130 26.984 252 143 10 1 237 102 327 2.01e-18 85.1
MsG0280007581.01.T01 MTR_5g043160 27.148 291 170 15 3 268 166 439 2.10e-18 85.9
MsG0280007581.01.T01 MTR_3g011100 29.213 267 158 10 3 261 332 575 2.29e-18 85.9
MsG0280007581.01.T01 MTR_4g102410 24.125 257 155 9 28 263 185 422 2.33e-18 85.5
MsG0280007581.01.T01 MTR_2g046900 26.263 297 175 14 3 287 123 387 3.41e-18 84.7
MsG0280007581.01.T01 MTR_6g079810 23.843 281 165 9 15 264 174 436 3.63e-18 85.1
MsG0280007581.01.T01 MTR_1g055375 26.712 292 178 11 2 285 104 367 4.33e-18 84.3
MsG0280007581.01.T01 MTR_4g107820 28.358 268 149 12 1 261 128 359 5.49e-18 84.0
MsG0280007581.01.T01 MTR_4g107780 28.358 268 149 12 1 261 128 359 5.49e-18 84.0
MsG0280007581.01.T01 MTR_4g107780 28.358 268 149 12 1 261 128 359 6.92e-18 84.0
MsG0280007581.01.T01 MTR_4g107820 28.358 268 149 12 1 261 128 359 7.47e-18 84.0
MsG0280007581.01.T01 MTR_3g030330 26.568 271 158 10 26 285 132 372 7.78e-18 83.6
MsG0280007581.01.T01 MTR_3g013740 28.767 219 125 9 3 213 147 342 8.53e-18 83.6
MsG0280007581.01.T01 MTR_7g445890 24.335 263 165 9 3 239 87 341 2.54e-17 82.0
MsG0280007581.01.T01 MTR_5g057790 30.660 212 123 10 4 213 141 330 2.55e-17 82.0
MsG0280007581.01.T01 MTR_4g108820 26.728 217 120 8 2 213 106 288 2.55e-17 81.3
MsG0280007581.01.T01 MTR_1004s0010 28.881 277 156 13 16 287 122 362 2.79e-17 81.6
MsG0280007581.01.T01 MTR_6g027890 29.434 265 157 13 8 257 49 298 2.89e-17 81.3
MsG0280007581.01.T01 MTR_4g023080 28.511 235 129 10 5 234 104 304 3.34e-17 81.6
MsG0280007581.01.T01 MTR_4g023130 29.832 238 134 11 2 234 54 263 3.38e-17 80.9
MsG0280007581.01.T01 MTR_1g054575 28.037 214 128 9 2 213 142 331 3.58e-17 82.4
MsG0280007581.01.T01 MTR_0760s0010 28.881 277 156 13 16 287 152 392 3.61e-17 81.6
MsG0280007581.01.T01 MTR_4g109270 25.329 304 178 14 1 294 100 364 3.64e-17 81.6
MsG0280007581.01.T01 MTR_6g017280 26.378 254 160 9 3 239 103 346 3.65e-17 81.6
MsG0280007581.01.T01 MTR_2g047832 26.667 285 154 13 3 263 124 377 3.73e-17 82.0
MsG0280007581.01.T01 MTR_3g030240 27.626 257 148 10 31 285 158 378 3.97e-17 81.6
MsG0280007581.01.T01 MTR_4g117850 26.613 248 136 8 1 234 112 327 4.23e-17 81.3
MsG0280007581.01.T01 MTR_4g031770 25.926 216 127 5 2 210 97 286 4.31e-17 81.3
MsG0280007581.01.T01 MTR_3g007390 30.769 156 97 5 62 215 1 147 5.72e-17 78.6
MsG0280007581.01.T01 MTR_3g011020 32.903 155 92 3 64 213 158 305 5.95e-17 80.9
MsG0280007581.01.T01 MTR_6g086825 26.616 263 148 11 30 266 192 435 6.32e-17 81.3
MsG0280007581.01.T01 MTR_3g010970 27.132 258 144 10 3 260 152 365 8.97e-17 80.5
MsG0280007581.01.T01 MTR_1g088120 28.302 265 140 10 3 234 107 354 9.11e-17 80.5
MsG0280007581.01.T01 MTR_4g118380 28.216 241 138 10 6 234 115 332 1.77e-16 79.3
MsG0280007581.01.T01 MTR_4g122850 23.794 311 201 10 5 307 98 380 1.80e-16 79.7
MsG0280007581.01.T01 MTR_3g006530 26.132 287 169 11 6 285 147 397 1.87e-16 79.7
MsG0280007581.01.T01 MTR_2g046920 26.180 233 146 8 60 287 164 375 2.00e-16 79.3
MsG0280007581.01.T01 MTR_6g017295 27.925 265 149 12 3 239 41 291 2.17e-16 80.1
MsG0280007581.01.T01 MTR_3g010520 27.138 269 160 11 19 285 126 360 2.86e-16 79.0
MsG0280007581.01.T01 MTR_4g094365 26.000 300 180 11 1 293 99 363 3.69e-16 78.6
MsG0280007581.01.T01 MTR_3g024150 28.962 183 109 6 31 213 155 316 3.98e-16 78.6
MsG0280007581.01.T01 MTR_6g079790 25.283 265 149 13 31 266 40 284 4.40e-16 77.8
MsG0280007581.01.T01 MTR_4g028660 25.843 267 167 10 31 277 138 393 4.94e-16 78.6
MsG0280007581.01.T01 MTR_4g027450 25.843 267 167 10 31 277 138 393 4.94e-16 78.6
MsG0280007581.01.T01 MTR_3g036430 25.368 272 174 9 16 285 99 343 5.05e-16 78.2
MsG0280007581.01.T01 MTR_4g030090 26.923 234 144 11 3 223 111 330 5.69e-16 78.2
MsG0280007581.01.T01 MTR_4g116320 30.814 172 104 7 68 234 43 204 6.59e-16 76.6
MsG0280007581.01.T01 MTR_6g014720 28.708 209 129 7 33 239 135 325 7.78e-16 77.8
MsG0280007581.01.T01 MTR_0054s0090 24.913 289 164 13 4 266 120 381 9.71e-16 77.8
MsG0280007581.01.T01 MTR_4g028680 23.810 273 177 9 30 282 138 399 9.82e-16 77.4
MsG0280007581.01.T01 MTR_6g048120 29.524 210 129 8 5 213 139 330 1.10e-15 77.4
MsG0280007581.01.T01 MTR_4g019990 23.675 283 177 9 3 267 108 369 1.20e-15 77.4
MsG0280007581.01.T01 MTR_2g047892 25.764 229 125 9 4 211 119 323 1.21e-15 77.4
MsG0280007581.01.T01 MTR_0054s0100 24.823 282 171 12 9 266 119 383 1.25e-15 77.4
MsG0280007581.01.T01 MTR_8g064890 28.102 274 146 16 12 266 122 363 1.43e-15 77.0
MsG0280007581.01.T01 MTR_3g036335 27.241 290 170 13 4 291 141 391 1.43e-15 77.0
MsG0280007581.01.T01 MTR_1g007410 26.070 257 152 11 31 268 146 383 1.60e-15 77.0
MsG0280007581.01.T01 MTR_0129s0070 25.000 220 143 7 10 213 118 331 1.98e-15 76.6
MsG0280007581.01.T01 MTR_6g090180 24.621 264 162 9 28 270 170 417 2.32e-15 76.6
MsG0280007581.01.T01 MTR_5g046260 26.203 187 105 6 27 213 100 253 2.89e-15 75.1
MsG0280007581.01.T01 MTR_8g467140 25.974 231 136 10 3 225 126 329 3.23e-15 75.5
MsG0280007581.01.T01 MTR_4g006350 26.518 313 185 13 9 296 594 886 3.52e-15 76.6
MsG0280007581.01.T01 MTR_6g007135 25.510 294 185 13 1 285 122 390 4.87e-15 75.5
MsG0280007581.01.T01 MTR_2g034700 26.190 210 130 8 10 213 119 309 5.43e-15 75.1
MsG0280007581.01.T01 MTR_1g058190 27.368 190 109 5 35 210 127 301 6.62e-15 75.1
MsG0280007581.01.T01 MTR_3g006640 26.712 292 166 11 4 276 19 281 7.07e-15 73.9
MsG0280007581.01.T01 MTR_1g094210 24.621 264 159 8 3 264 152 377 7.36e-15 75.1
MsG0280007581.01.T01 MTR_2g021252 26.977 215 119 10 2 213 141 320 7.46e-15 74.7
MsG0280007581.01.T01 MTR_4g117770 27.966 236 139 10 5 234 105 315 7.69e-15 74.7
MsG0280007581.01.T01 MTR_4g117810 27.966 236 139 10 5 234 105 315 7.69e-15 74.7
MsG0280007581.01.T01 MTR_0134s0060 23.529 289 164 12 15 266 119 387 7.91e-15 75.1
MsG0280007581.01.T01 MTR_1g113900 28.279 244 151 9 33 276 15 234 8.09e-15 73.2
MsG0280007581.01.T01 MTR_3g023930 26.068 234 139 10 31 264 146 345 8.98e-15 74.7
MsG0280007581.01.T01 MTR_3g030310 23.611 216 141 7 1 213 116 310 9.32e-15 74.7
MsG0280007581.01.T01 MTR_1g055135 26.906 223 133 6 1 214 105 306 9.50e-15 74.3
MsG0280007581.01.T01 MTR_6g013270 27.962 211 129 7 33 239 152 343 1.08e-14 74.3
MsG0280007581.01.T01 MTR_4g129160 25.573 262 151 12 2 238 118 360 1.10e-14 74.3
MsG0280007581.01.T01 MTR_8g102520 26.222 225 127 9 28 237 72 272 1.13e-14 73.9
MsG0280007581.01.T01 MTR_4g118370 25.940 266 153 9 26 286 29 255 1.36e-14 72.8
MsG0280007581.01.T01 MTR_1g094210 25.214 234 143 7 3 234 152 355 1.39e-14 74.3
MsG0280007581.01.T01 MTR_6g048140 27.119 295 169 15 5 287 145 405 1.59e-14 73.9
MsG0280007581.01.T01 MTR_5g097220 25.517 290 154 13 15 266 116 381 1.60e-14 73.9
MsG0280007581.01.T01 MTR_4g028750 25.837 209 138 7 31 224 139 345 1.68e-14 73.9
MsG0280007581.01.T01 MTR_1g056710 26.761 213 129 6 3 210 125 315 1.88e-14 73.6
MsG0280007581.01.T01 MTR_0129s0120 24.545 220 144 7 10 213 118 331 2.13e-14 73.6
MsG0280007581.01.T01 MTR_5g057690 29.439 214 115 9 3 213 140 320 2.37e-14 73.6
MsG0280007581.01.T01 MTR_6g016285 25.862 232 141 7 3 214 115 335 2.40e-14 73.6
MsG0280007581.01.T01 MTR_4g023380 24.359 312 168 12 5 293 112 378 2.54e-14 73.2
MsG0280007581.01.T01 MTR_3g030250 26.609 233 134 10 31 260 155 353 2.65e-14 73.2
MsG0280007581.01.T01 MTR_5g097210 29.358 218 117 11 5 213 104 293 2.75e-14 73.2
MsG0280007581.01.T01 MTR_7g079370 28.000 225 118 10 5 209 82 282 2.96e-14 72.8
MsG0280007581.01.T01 MTR_5g056990 33.766 154 88 7 62 213 34 175 3.10e-14 71.6
MsG0280007581.01.T01 MTR_4g132560 31.410 156 95 5 66 213 41 192 5.20e-14 71.2
MsG0280007581.01.T01 MTR_3g007300 27.431 288 153 13 3 285 131 367 6.20e-14 72.0
MsG0280007581.01.T01 MTR_4g108810 33.544 158 87 5 113 265 70 214 6.81e-14 70.5
MsG0280007581.01.T01 MTR_3g010870 27.128 188 110 6 31 213 150 315 8.14e-14 71.6
MsG0280007581.01.T01 MTR_7g070440 24.176 273 182 10 3 256 95 361 8.48e-14 71.6
MsG0280007581.01.T01 MTR_2g043410 24.915 293 160 12 3 264 134 397 9.22e-14 71.6
MsG0280007581.01.T01 MTR_2g021210 30.108 186 107 6 31 213 195 360 9.66e-14 71.6
MsG0280007581.01.T01 MTR_2g043400 25.633 316 174 13 3 286 133 419 9.78e-14 71.6
MsG0280007581.01.T01 MTR_5g070080 27.801 241 127 12 1 227 120 327 1.04e-13 71.6
MsG0280007581.01.T01 MTR_6g092560 27.547 265 147 13 3 239 107 354 1.14e-13 71.6
MsG0280007581.01.T01 MTR_1g007430 25.481 208 125 8 27 218 114 307 1.23e-13 70.9
MsG0280007581.01.T01 MTR_2g065860 24.436 266 169 11 12 266 119 363 1.63e-13 70.9
MsG0280007581.01.T01 MTR_3g010430 27.778 216 109 8 16 213 136 322 1.69e-13 70.9
MsG0280007581.01.T01 MTR_3g023940 27.604 192 106 7 31 213 153 320 2.41e-13 70.5
MsG0280007581.01.T01 MTR_2g078850 23.913 276 166 10 4 268 128 370 2.81e-13 70.1
MsG0280007581.01.T01 MTR_3g072470 28.194 227 122 11 3 213 130 331 3.07e-13 70.1
MsG0280007581.01.T01 MTR_4g013180 25.758 264 154 11 3 239 102 350 3.23e-13 70.5
MsG0280007581.01.T01 MTR_8g018110 23.973 292 155 12 9 267 116 373 4.53e-13 69.7
MsG0280007581.01.T01 MTR_4g014370 26.087 230 135 10 7 213 127 344 4.66e-13 69.7
MsG0280007581.01.T01 MTR_7g066100 24.917 301 193 12 3 283 105 392 5.01e-13 69.3
MsG0280007581.01.T01 MTR_1g055065 23.311 296 187 10 4 285 19 288 6.09e-13 68.6
MsG0280007581.01.T01 MTR_5g022420 24.188 277 147 14 2 263 119 347 6.75e-13 68.9
MsG0280007581.01.T01 MTR_7g061060 26.515 264 141 11 3 241 111 346 7.04e-13 68.9
MsG0280007581.01.T01 MTR_3g010620 27.700 213 111 8 1 213 136 305 7.62e-13 68.9
MsG0280007581.01.T01 MTR_3g011120 26.786 224 141 11 12 226 120 329 7.66e-13 68.9
MsG0280007581.01.T01 MTR_7g079160 27.839 273 146 14 3 240 125 381 8.36e-13 68.9
MsG0280007581.01.T01 MTR_7g066840 26.106 226 127 10 64 266 168 376 8.58e-13 68.9
MsG0280007581.01.T01 MTR_8g063440 28.788 198 118 10 29 213 131 318 9.13e-13 68.6
MsG0280007581.01.T01 MTR_4g030980 25.000 244 149 7 3 226 137 366 1.13e-12 68.6
MsG0280007581.01.T01 MTR_1g100763 31.792 173 100 7 93 261 140 298 1.28e-12 67.8
MsG0280007581.01.T01 MTR_6g478230 25.954 262 142 12 30 266 148 382 1.35e-12 68.2
MsG0280007581.01.T01 MTR_7g078900 27.313 227 133 9 3 213 123 333 1.41e-12 68.2
MsG0280007581.01.T01 MTR_2g021770 24.766 214 132 7 25 214 135 343 1.64e-12 68.2
MsG0280007581.01.T01 MTR_0128s0070 25.397 252 155 10 3 239 122 355 1.67e-12 67.8
MsG0280007581.01.T01 MTR_4g011660 25.882 255 135 12 3 224 120 353 1.69e-12 68.2
MsG0280007581.01.T01 MTR_4g117550 25.197 254 130 12 29 266 139 348 1.73e-12 67.8
MsG0280007581.01.T01 MTR_4g117750 27.542 236 143 7 12 237 93 310 2.79e-12 67.4
MsG0280007581.01.T01 MTR_7g077970 26.749 243 120 9 2 214 113 327 2.98e-12 67.4
MsG0280007581.01.T01 MTR_2g046800 29.333 150 99 3 64 213 185 327 3.17e-12 67.0
MsG0280007581.01.T01 MTR_3g006500 25.490 255 151 11 31 283 145 362 3.22e-12 67.0
MsG0280007581.01.T01 MTR_6g078010 26.027 292 170 15 24 300 82 342 3.27e-12 66.6
MsG0280007581.01.T01 MTR_5g074850 23.420 269 158 9 5 239 134 388 3.42e-12 67.8
MsG0280007581.01.T01 MTR_8g464770 26.087 207 134 8 15 213 120 315 3.43e-12 67.0
MsG0280007581.01.T01 MTR_7g035295 24.055 291 153 12 3 259 115 371 3.61e-12 67.0
MsG0280007581.01.T01 MTR_7g061050 27.273 231 123 8 3 214 108 312 3.66e-12 67.0
MsG0280007581.01.T01 MTR_5g096910 25.203 246 145 12 31 266 151 367 3.73e-12 67.0
MsG0280007581.01.T01 MTR_7g077910 25.652 230 130 10 2 213 41 247 3.93e-12 66.6
MsG0280007581.01.T01 MTR_0707s0020 24.026 308 194 12 1 284 152 443 4.02e-12 67.0
MsG0280007581.01.T01 MTR_8g032390 30.151 199 103 10 31 213 128 306 4.65e-12 66.6
MsG0280007581.01.T01 MTR_4g031020 25.410 244 148 7 3 226 137 366 4.82e-12 66.6
MsG0280007581.01.T01 MTR_0831s0010 29.386 228 130 13 29 240 166 378 5.11e-12 66.6
MsG0280007581.01.T01 MTR_4g109280 26.891 238 144 11 1 234 95 306 5.56e-12 66.2
MsG0280007581.01.T01 MTR_6g461660 24.352 193 127 4 31 211 149 334 5.92e-12 66.2
MsG0280007581.01.T01 MTR_7g056570 26.471 306 165 14 3 277 112 388 6.40e-12 66.2
MsG0280007581.01.T01 MTR_5g064700 24.265 272 152 13 29 267 96 346 6.71e-12 65.9
MsG0280007581.01.T01 MTR_1g053510 24.583 240 135 8 9 216 119 344 7.40e-12 65.9
MsG0280007581.01.T01 MTR_4g013185 27.004 237 129 10 2 213 120 337 8.17e-12 65.9
MsG0280007581.01.T01 MTR_6g086920 24.893 233 146 8 1 214 164 386 8.87e-12 65.9
MsG0280007581.01.T01 MTR_3g083660 26.047 215 138 8 62 276 76 269 9.17e-12 65.1
MsG0280007581.01.T01 MTR_7g078860 23.938 259 157 10 7 242 117 358 9.85e-12 65.5
MsG0280007581.01.T01 MTR_3g058440 27.545 167 106 5 2 168 133 284 1.02e-11 65.1
MsG0280007581.01.T01 MTR_2g435950 27.442 215 134 7 31 240 65 262 1.10e-11 65.1
MsG0280007581.01.T01 MTR_2g021800 24.576 236 137 9 9 213 128 353 1.16e-11 65.5
MsG0280007581.01.T01 MTR_7g056290 26.957 230 121 11 3 213 134 335 1.36e-11 65.1
MsG0280007581.01.T01 MTR_3g013950 27.863 262 144 14 4 239 103 345 1.39e-11 65.1
MsG0280007581.01.T01 MTR_7g077070 25.168 298 186 11 2 273 121 407 1.49e-11 65.1
MsG0280007581.01.T01 MTR_7g091630 24.458 323 188 13 3 287 129 433 1.80e-11 65.1
MsG0280007581.01.T01 MTR_7g078040 28.571 231 129 11 3 213 123 337 1.85e-11 64.7
MsG0280007581.01.T01 MTR_7g056820 25.249 301 173 13 4 285 108 375 1.90e-11 64.7
MsG0280007581.01.T01 MTR_0097s0030 24.889 225 128 9 3 210 108 308 2.72e-11 64.3
MsG0280007581.01.T01 MTR_2g047240 24.889 225 128 9 3 210 108 308 2.72e-11 64.3
MsG0280007581.01.T01 MTR_1g015730 24.280 243 151 8 64 290 162 387 2.88e-11 64.3
MsG0280007581.01.T01 MTR_1g114650 29.605 152 85 6 67 213 24 158 2.90e-11 62.8
MsG0280007581.01.T01 MTR_7g056390 26.872 227 125 10 3 213 130 331 2.90e-11 64.3
MsG0280007581.01.T01 MTR_8g062660 25.581 215 122 8 16 213 122 315 3.01e-11 64.7
MsG0280007581.01.T01 MTR_3g010440 28.641 206 124 8 89 285 141 332 3.04e-11 63.9
MsG0280007581.01.T01 MTR_6g463430 37.600 125 65 7 92 209 14 132 3.14e-11 62.0
MsG0280007581.01.T01 MTR_8g433040 24.834 302 165 12 5 293 111 363 4.08e-11 63.5
MsG0280007581.01.T01 MTR_8g032380 24.834 302 165 12 5 293 111 363 4.08e-11 63.5
MsG0280007581.01.T01 MTR_1g115185 26.776 183 117 5 33 215 163 328 4.24e-11 63.5
MsG0280007581.01.T01 MTR_7g016930 27.273 209 128 10 15 209 106 304 5.39e-11 63.2
MsG0280007581.01.T01 MTR_4g034860 24.055 291 170 13 3 264 125 393 5.50e-11 63.5
MsG0280007581.01.T01 MTR_2g060555 27.461 193 119 6 56 246 80 253 5.85e-11 62.4
MsG0280007581.01.T01 MTR_2g066200 26.442 208 123 10 24 213 128 323 5.98e-11 63.2
MsG0280007581.01.T01 MTR_0267s0050 26.718 262 145 14 4 239 103 343 6.55e-11 63.2
MsG0280007581.01.T01 MTR_8g039500 23.697 211 136 8 16 213 114 312 6.84e-11 62.8
MsG0280007581.01.T01 MTR_7g066000 25.877 228 141 9 3 214 118 333 6.94e-11 63.2
MsG0280007581.01.T01 MTR_5g097330 22.897 214 140 8 27 224 145 349 6.94e-11 63.2
MsG0280007581.01.T01 MTR_7g061090 25.172 290 164 13 3 267 128 389 7.73e-11 62.8
MsG0280007581.01.T01 MTR_7g017040 26.957 230 130 12 5 211 117 331 8.85e-11 62.8
MsG0280007581.01.T01 MTR_0464s0020 23.478 230 137 7 2 213 135 343 8.90e-11 62.8
MsG0280007581.01.T01 MTR_7g070880 22.963 270 173 12 3 241 114 379 9.50e-11 62.8
MsG0280007581.01.T01 MTR_8g030630 29.747 158 87 6 86 234 274 416 9.58e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007581.01.T01 AT4G12560 32.267 344 181 11 3 315 91 413 2.65e-49 169
MsG0280007581.01.T01 AT4G12560 32.267 344 181 11 3 315 91 413 2.65e-49 169
MsG0280007581.01.T01 AT4G12560 32.267 344 181 11 3 315 91 413 2.65e-49 169
MsG0280007581.01.T01 AT4G22390 30.573 314 181 11 24 315 103 401 4.64e-32 123
MsG0280007581.01.T01 AT4G22390 30.794 315 180 12 24 315 103 402 1.65e-31 122
MsG0280007581.01.T01 AT3G06240 30.328 244 139 10 1 240 163 379 4.32e-24 102
MsG0280007581.01.T01 AT3G07870 27.586 319 178 15 3 290 119 415 8.86e-16 77.8

Find 81 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCACTTGTGGATCATAAAA+AGG 0.207995 2:+17565346 None:intergenic
TGAAGTTCATGTTGCTGTTT+TGG 0.222397 2:-17565092 MsG0280007581.01.T01:CDS
CTTCAACATTTATACGATTT+GGG 0.223285 2:-17565268 MsG0280007581.01.T01:CDS
TCTTCAACATTTATACGATT+TGG 0.232639 2:-17565269 MsG0280007581.01.T01:CDS
GTGTGATGTTTACGGGTGTT+AGG 0.259793 2:+17565508 None:intergenic
AAATGCTCCTTATGCGTTCA+TGG 0.305810 2:-17565439 MsG0280007581.01.T01:CDS
TAAAACTAAAATTGATGTTT+GGG 0.311528 2:-17565041 MsG0280007581.01.T01:CDS
GGCCTCGTCGCCATCTCCAC+TGG 0.312987 2:-17565583 MsG0280007581.01.T01:CDS
ATAAAACTAAAATTGATGTT+TGG 0.318854 2:-17565042 MsG0280007581.01.T01:CDS
AATTTCAAGTGTGAGGTTAA+AGG 0.329922 2:+17565171 None:intergenic
TTCTTCCTACGATTATCAAC+AGG 0.341927 2:+17564746 None:intergenic
AACAGTAAAATGTCTCTTAT+CGG 0.343195 2:-17565616 None:intergenic
AAGGGATAGTGTGATGTTTA+CGG 0.350655 2:+17565500 None:intergenic
TCCTTATGCGTTCATGGCTT+CGG 0.353785 2:-17565433 MsG0280007581.01.T01:CDS
TGCAGCATAGGAAGCTGTTT+TGG 0.360017 2:-17564865 MsG0280007581.01.T01:CDS
GTTTGGGTGATGAAAGAATA+TGG 0.362113 2:-17565025 MsG0280007581.01.T01:CDS
GGAATAGGAAGAGGGAGAAA+AGG 0.367652 2:+17565481 None:intergenic
AGGGATAGTGTGATGTTTAC+GGG 0.371510 2:+17565501 None:intergenic
GTTCCTCTTCCTGATGAAAT+AGG 0.374911 2:-17565139 MsG0280007581.01.T01:CDS
TTCCAGATTGTGATTTCGTT+GGG 0.374915 2:+17565532 None:intergenic
ATGTAACCCATCAAGTTTCT+TGG 0.377640 2:+17565210 None:intergenic
GGATTTAAATTGAGATTGTA+AGG 0.380153 2:-17564092 None:intergenic
GAATAGGAAGAGGGAGAAAA+GGG 0.411060 2:+17565482 None:intergenic
ATTATGACCAAGAAACTTGA+TGG 0.415675 2:-17565217 MsG0280007581.01.T01:CDS
AAGAAGTACCTTCTCTTGCT+TGG 0.423449 2:+17564713 None:intergenic
GAAATAGGTGAAGAAGTTAA+TGG 0.425077 2:-17565124 MsG0280007581.01.T01:CDS
GCCTCGTCGCCATCTCCACT+GGG 0.425121 2:-17565582 MsG0280007581.01.T01:CDS
TCCATCACTAGAATAACATA+TGG 0.427049 2:+17564928 None:intergenic
GTGATTTCGTTGGGGTTGTC+AGG 0.431884 2:+17565541 None:intergenic
TGTGATGTTTACGGGTGTTA+GGG 0.434107 2:+17565509 None:intergenic
TTGTCGTCGTAGTTAAGAAT+AGG 0.435069 2:+17565460 None:intergenic
AACATAGCTTCATTCAGATT+AGG 0.437686 2:+17564800 None:intergenic
CATAGCAGGAATTATCTTCC+AGG 0.440755 2:+17565300 None:intergenic
ACAATCTCAATTTAAATCCT+CGG 0.447130 2:+17564096 None:intergenic
TTGTTGAGAATTCTATTCAC+TGG 0.447743 2:-17565240 MsG0280007581.01.T01:CDS
ACTTCTTCACCTATTTCATC+AGG 0.451165 2:+17565130 None:intergenic
CAATCTCAATTTAAATCCTC+GGG 0.460965 2:+17564097 None:intergenic
TTAAGAATAGGAATAGGAAG+AGG 0.463480 2:+17565472 None:intergenic
ACCGAAGCCATGAACGCATA+AGG 0.471596 2:+17565432 None:intergenic
GAACAAATTAGTCATGTTGA+AGG 0.473655 2:-17564827 MsG0280007581.01.T01:CDS
GTTCCAGATTGTGATTTCGT+TGG 0.481479 2:+17565531 None:intergenic
TCAGCTTGAAAACAAACTCC+TGG 0.481764 2:-17565318 MsG0280007581.01.T01:CDS
TGAAGATCGTACGGCATAGC+AGG 0.487119 2:+17565286 None:intergenic
TCGTAGTTAAGAATAGGAAT+AGG 0.492454 2:+17565466 None:intergenic
TCTAAGTAGTTTGTAATCAC+CGG 0.494354 2:+17565396 None:intergenic
AACGATTACCCCAGTGGAGA+TGG 0.496252 2:+17565573 None:intergenic
ACCCCAACGAAATCACAATC+TGG 0.497581 2:-17565534 MsG0280007581.01.T01:CDS
TAAGAATAGGAATAGGAAGA+GGG 0.502911 2:+17565473 None:intergenic
TGATGGAAGGAAGGTTCTGT+TGG 0.503862 2:-17564912 MsG0280007581.01.T01:CDS
GTCTCTTATCGGTTCATGCA+AGG 0.511021 2:-17565605 MsG0280007581.01.T01:CDS
TCACCTATTTCATCAGGAAG+AGG 0.521517 2:+17565136 None:intergenic
CCCATATGTTATTCTAGTGA+TGG 0.529933 2:-17564929 MsG0280007581.01.T01:CDS
TTCAACATTTATACGATTTG+GGG 0.546261 2:-17565267 MsG0280007581.01.T01:CDS
AATATGGATGTAGAGATAGT+TGG 0.550990 2:-17565009 MsG0280007581.01.T01:CDS
CCATCACTAGAATAACATAT+GGG 0.552362 2:+17564929 None:intergenic
TTAAAGGCAACAATTAAAGA+AGG 0.554266 2:+17565187 None:intergenic
CATTGAAAATTTCAAGTGTG+AGG 0.557893 2:+17565164 None:intergenic
TGTTGATAATCGTAGGAAGA+AGG 0.563176 2:-17564744 MsG0280007581.01.T01:CDS
ATTTACCTTTGAAATTGTTG+AGG 0.568420 2:-17564952 MsG0280007581.01.T01:CDS
TCTCTTATCGGTTCATGCAA+GGG 0.568864 2:-17565604 MsG0280007581.01.T01:CDS
TATAAATGTTGAAGATCGTA+CGG 0.573781 2:+17565277 None:intergenic
GATTTAAATTGAGATTGTAA+GGG 0.578977 2:-17564091 None:intergenic
AGAATCATCCAAGCAAGAGA+AGG 0.579951 2:-17564721 MsG0280007581.01.T01:intron
ATGGGCCTCAACAATTTCAA+AGG 0.582973 2:+17564947 None:intergenic
CGATTATCAACAGGGAAGGA+AGG 0.584021 2:+17564755 None:intergenic
TTATTCTAGTGATGGAAGGA+AGG 0.586410 2:-17564921 MsG0280007581.01.T01:CDS
AAGCTGAAGAGTCTCACTTG+TGG 0.589500 2:+17565334 None:intergenic
TATCAACAGGGAAGGAAGGT+GGG 0.592716 2:+17564759 None:intergenic
TCCAGATTGTGATTTCGTTG+GGG 0.594659 2:+17565533 None:intergenic
CCTTCCCTGTTGATAATCGT+AGG 0.598273 2:-17564751 MsG0280007581.01.T01:CDS
TATGTTATTCTAGTGATGGA+AGG 0.602290 2:-17564925 MsG0280007581.01.T01:CDS
TTATGACCAAGAAACTTGAT+GGG 0.605248 2:-17565216 MsG0280007581.01.T01:CDS
TTATCAACAGGGAAGGAAGG+TGG 0.613124 2:+17564758 None:intergenic
CCTACGATTATCAACAGGGA+AGG 0.631132 2:+17564751 None:intergenic
TCAACATTTATACGATTTGG+GGG 0.642575 2:-17565266 MsG0280007581.01.T01:CDS
CCCCAGTGGAGATGGCGACG+AGG 0.660604 2:+17565581 None:intergenic
TCTTCCTACGATTATCAACA+GGG 0.668465 2:+17564747 None:intergenic
AGGGACGACTTCTTGTCCCG+AGG 0.669398 2:-17564113 MsG0280007581.01.T01:CDS
CGTGAAAACGATTACCCCAG+TGG 0.679157 2:+17565567 None:intergenic
AGAGTGTCTTTGTATCACTG+TGG 0.706752 2:-17565068 MsG0280007581.01.T01:CDS
CCTCGTCGCCATCTCCACTG+GGG 0.733446 2:-17565581 MsG0280007581.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAACTAAAATTGATGTT+TGG - Chr2:17564659-17564678 MsG0280007581.01.T01:intron 15.0%
!! CAAATATATAAACATAAACA+AGG + Chr2:17565207-17565226 None:intergenic 15.0%
!! TAAAACTAAAATTGATGTTT+GGG - Chr2:17564660-17564679 MsG0280007581.01.T01:intron 15.0%
!! TATAAGTTATTGTTTATCAT+AGG - Chr2:17565036-17565055 MsG0280007581.01.T01:CDS 15.0%
!!! ATTTCTTAATGAAAGAATTT+TGG - Chr2:17565324-17565343 MsG0280007581.01.T01:CDS 15.0%
!! TCAAATTGAATTCTTATCAT+AGG - Chr2:17565148-17565167 MsG0280007581.01.T01:CDS 20.0%
! AAAAAAACCATGTTTACGAA+AGG + Chr2:17565505-17565524 None:intergenic 25.0%
! AAAGGAACTATGCATAAATT+TGG + Chr2:17565487-17565506 None:intergenic 25.0%
! ACAATCTCAATTTAAATCCT+CGG + Chr2:17565608-17565627 None:intergenic 25.0%
! CTTCAACATTTATACGATTT+GGG - Chr2:17564433-17564452 MsG0280007581.01.T01:intron 25.0%
! TATAAACATAAACAAGGTAC+AGG + Chr2:17565201-17565220 None:intergenic 25.0%
! TATAAATGTTGAAGATCGTA+CGG + Chr2:17564427-17564446 None:intergenic 25.0%
! TCTTCAACATTTATACGATT+TGG - Chr2:17564432-17564451 MsG0280007581.01.T01:intron 25.0%
! TTAAAGGCAACAATTAAAGA+AGG + Chr2:17564517-17564536 None:intergenic 25.0%
! TTCAACATTTATACGATTTG+GGG - Chr2:17564434-17564453 MsG0280007581.01.T01:intron 25.0%
!! ATACATTGTTGTCAACTTTT+TGG + Chr2:17565260-17565279 None:intergenic 25.0%
!!! ATTTACCTTTGAAATTGTTG+AGG - Chr2:17564749-17564768 MsG0280007581.01.T01:CDS 25.0%
!!! GAAAGTTGTTGTTTAGAAAT+TGG - Chr2:17565445-17565464 MsG0280007581.01.T01:CDS 25.0%
AACATAGCTTCATTCAGATT+AGG + Chr2:17564904-17564923 None:intergenic 30.0%
AATATGGATGTAGAGATAGT+TGG - Chr2:17564692-17564711 MsG0280007581.01.T01:intron 30.0%
ATCATATACAGATTATCCCT+AGG - Chr2:17565073-17565092 MsG0280007581.01.T01:CDS 30.0%
ATTATGACCAAGAAACTTGA+TGG - Chr2:17564484-17564503 MsG0280007581.01.T01:intron 30.0%
CAATCTCAATTTAAATCCTC+GGG + Chr2:17565607-17565626 None:intergenic 30.0%
CATACATAGAAATCAAACCA+CGG + Chr2:17565416-17565435 None:intergenic 30.0%
CCATCACTAGAATAACATAT+GGG + Chr2:17564775-17564794 None:intergenic 30.0%
GAAATAGGTGAAGAAGTTAA+TGG - Chr2:17564577-17564596 MsG0280007581.01.T01:intron 30.0%
GAACAAATTAGTCATGTTGA+AGG - Chr2:17564874-17564893 MsG0280007581.01.T01:CDS 30.0%
TAAGAATAGGAATAGGAAGA+GGG + Chr2:17564231-17564250 None:intergenic 30.0%
TCACTTGTGGATCATAAAAA+GGG + Chr2:17564357-17564376 None:intergenic 30.0%
TCCATCACTAGAATAACATA+TGG + Chr2:17564776-17564795 None:intergenic 30.0%
TCGTAGTTAAGAATAGGAAT+AGG + Chr2:17564238-17564257 None:intergenic 30.0%
TTAAGAATAGGAATAGGAAG+AGG + Chr2:17564232-17564251 None:intergenic 30.0%
TTAGTTTAAGAGATGAGCTT+GGG - Chr2:17565288-17565307 MsG0280007581.01.T01:CDS 30.0%
TTATGACCAAGAAACTTGAT+GGG - Chr2:17564485-17564504 MsG0280007581.01.T01:intron 30.0%
TTGTTGAGAATTCTATTCAC+TGG - Chr2:17564461-17564480 MsG0280007581.01.T01:intron 30.0%
! AATGAAGCTATGTTTTGTGT+TGG - Chr2:17564910-17564929 MsG0280007581.01.T01:CDS 30.0%
! AATTTCAAGTGTGAGGTTAA+AGG + Chr2:17564533-17564552 None:intergenic 30.0%
! CACACTTGAAATTTTCAATG+AGG - Chr2:17564540-17564559 MsG0280007581.01.T01:intron 30.0%
! CATTGAAAATTTCAAGTGTG+AGG + Chr2:17564540-17564559 None:intergenic 30.0%
! TATGTTATTCTAGTGATGGA+AGG - Chr2:17564776-17564795 MsG0280007581.01.T01:CDS 30.0%
! TCAACATTTATACGATTTGG+GGG - Chr2:17564435-17564454 MsG0280007581.01.T01:intron 30.0%
! TCTAAGTAGTTTGTAATCAC+CGG + Chr2:17564308-17564327 None:intergenic 30.0%
!! TTCGGTTTTGATCAATTAAC+CGG - Chr2:17564286-17564305 MsG0280007581.01.T01:intron 30.0%
AAGGGATAGTGTGATGTTTA+CGG + Chr2:17564204-17564223 None:intergenic 35.0%
ACTTCTTCACCTATTTCATC+AGG + Chr2:17564574-17564593 None:intergenic 35.0%
ATAGAAATCAAACCACGGTA+GGG + Chr2:17565411-17565430 None:intergenic 35.0%
ATGTAACCCATCAAGTTTCT+TGG + Chr2:17564494-17564513 None:intergenic 35.0%
CATAGTTCCTTTCGTAAACA+TGG - Chr2:17565495-17565514 MsG0280007581.01.T01:CDS 35.0%
CCCATATGTTATTCTAGTGA+TGG - Chr2:17564772-17564791 MsG0280007581.01.T01:CDS 35.0%
CTCACTTGTGGATCATAAAA+AGG + Chr2:17564358-17564377 None:intergenic 35.0%
GTTTGGGTGATGAAAGAATA+TGG - Chr2:17564676-17564695 MsG0280007581.01.T01:intron 35.0%
TCTTCCTACGATTATCAACA+GGG + Chr2:17564957-17564976 None:intergenic 35.0%
TTCCAGATTGTGATTTCGTT+GGG + Chr2:17564172-17564191 None:intergenic 35.0%
TTCTTCCTACGATTATCAAC+AGG + Chr2:17564958-17564977 None:intergenic 35.0%
TTGTCGTCGTAGTTAAGAAT+AGG + Chr2:17564244-17564263 None:intergenic 35.0%
! GGAAAGAGTTCATGTTTTGT+TGG - Chr2:17564810-17564829 MsG0280007581.01.T01:CDS 35.0%
! GTAGGGTAGAATAGTGTTTT+AGG + Chr2:17565394-17565413 None:intergenic 35.0%
! GTTAGTTTAAGAGATGAGCT+TGG - Chr2:17565287-17565306 MsG0280007581.01.T01:CDS 35.0%
! TTATTCTAGTGATGGAAGGA+AGG - Chr2:17564780-17564799 MsG0280007581.01.T01:CDS 35.0%
!! AAGAGTTCATGTTTTGTTGG+AGG - Chr2:17564813-17564832 MsG0280007581.01.T01:CDS 35.0%
!! TGTTGATAATCGTAGGAAGA+AGG - Chr2:17564957-17564976 MsG0280007581.01.T01:CDS 35.0%
!!! GAAGTTCATGTTGCTGTTTT+GGG - Chr2:17564610-17564629 MsG0280007581.01.T01:intron 35.0%
!!! GAGATGAATTTTTTCCCACA+GGG - Chr2:17565569-17565588 MsG0280007581.01.T01:CDS 35.0%
!!! TGAAGTTCATGTTGCTGTTT+TGG - Chr2:17564609-17564628 MsG0280007581.01.T01:intron 35.0%
!!! TGAGATGAATTTTTTCCCAC+AGG - Chr2:17565568-17565587 MsG0280007581.01.T01:CDS 35.0%
AAATGCTCCTTATGCGTTCA+TGG - Chr2:17564262-17564281 MsG0280007581.01.T01:intron 40.0%
ACAGATTATCCCTAGGAAGA+AGG - Chr2:17565080-17565099 MsG0280007581.01.T01:CDS 40.0%
AGAATCATCCAAGCAAGAGA+AGG - Chr2:17564980-17564999 MsG0280007581.01.T01:CDS 40.0%
AGGGATAGTGTGATGTTTAC+GGG + Chr2:17564203-17564222 None:intergenic 40.0%
ATGGGCCTCAACAATTTCAA+AGG + Chr2:17564757-17564776 None:intergenic 40.0%
CATAGAAATCAAACCACGGT+AGG + Chr2:17565412-17565431 None:intergenic 40.0%
CATAGCAGGAATTATCTTCC+AGG + Chr2:17564404-17564423 None:intergenic 40.0%
GAATAGGAAGAGGGAGAAAA+GGG + Chr2:17564222-17564241 None:intergenic 40.0%
GTTCCAGATTGTGATTTCGT+TGG + Chr2:17564173-17564192 None:intergenic 40.0%
GTTCCTCTTCCTGATGAAAT+AGG - Chr2:17564562-17564581 MsG0280007581.01.T01:intron 40.0%
TCACCTATTTCATCAGGAAG+AGG + Chr2:17564568-17564587 None:intergenic 40.0%
TCAGCTTGAAAACAAACTCC+TGG - Chr2:17564383-17564402 MsG0280007581.01.T01:intron 40.0%
TCCAGATTGTGATTTCGTTG+GGG + Chr2:17564171-17564190 None:intergenic 40.0%
TGTGATGTTTACGGGTGTTA+GGG + Chr2:17564195-17564214 None:intergenic 40.0%
! AGAGTGTCTTTGTATCACTG+TGG - Chr2:17564633-17564652 MsG0280007581.01.T01:intron 40.0%
!! AAGAAGTACCTTCTCTTGCT+TGG + Chr2:17564991-17565010 None:intergenic 40.0%
!! TCTCTTATCGGTTCATGCAA+GGG - Chr2:17564097-17564116 MsG0280007581.01.T01:CDS 40.0%
AACACTATTCTACCCTACCG+TGG - Chr2:17565396-17565415 MsG0280007581.01.T01:CDS 45.0%
AAGCTGAAGAGTCTCACTTG+TGG + Chr2:17564370-17564389 None:intergenic 45.0%
ACCCCAACGAAATCACAATC+TGG - Chr2:17564167-17564186 MsG0280007581.01.T01:intron 45.0%
AGCTCATTCTCCTTCTTCCT+AGG + Chr2:17565093-17565112 None:intergenic 45.0%
CCTACGATTATCAACAGGGA+AGG + Chr2:17564953-17564972 None:intergenic 45.0%
CGATTATCAACAGGGAAGGA+AGG + Chr2:17564949-17564968 None:intergenic 45.0%
GCTCATTCTCCTTCTTCCTA+GGG + Chr2:17565092-17565111 None:intergenic 45.0%
GGAATAGGAAGAGGGAGAAA+AGG + Chr2:17564223-17564242 None:intergenic 45.0%
GTGTGATGTTTACGGGTGTT+AGG + Chr2:17564196-17564215 None:intergenic 45.0%
TATCAACAGGGAAGGAAGGT+GGG + Chr2:17564945-17564964 None:intergenic 45.0%
TCCTTATGCGTTCATGGCTT+CGG - Chr2:17564268-17564287 MsG0280007581.01.T01:intron 45.0%
TGATGGAAGGAAGGTTCTGT+TGG - Chr2:17564789-17564808 MsG0280007581.01.T01:CDS 45.0%
TTATCAACAGGGAAGGAAGG+TGG + Chr2:17564946-17564965 None:intergenic 45.0%
! TGCAGCATAGGAAGCTGTTT+TGG - Chr2:17564836-17564855 MsG0280007581.01.T01:CDS 45.0%
!! CCTTCCCTGTTGATAATCGT+AGG - Chr2:17564950-17564969 MsG0280007581.01.T01:CDS 45.0%
!! GTCTCTTATCGGTTCATGCA+AGG - Chr2:17564096-17564115 MsG0280007581.01.T01:CDS 45.0%
!! TTTTGTTGGAGGTGCAGCAT+AGG - Chr2:17564824-17564843 MsG0280007581.01.T01:CDS 45.0%
AACGATTACCCCAGTGGAGA+TGG + Chr2:17564131-17564150 None:intergenic 50.0%
ACCGAAGCCATGAACGCATA+AGG + Chr2:17564272-17564291 None:intergenic 50.0%
CGTGAAAACGATTACCCCAG+TGG + Chr2:17564137-17564156 None:intergenic 50.0%
GTGATTTCGTTGGGGTTGTC+AGG + Chr2:17564163-17564182 None:intergenic 50.0%
TGAAGATCGTACGGCATAGC+AGG + Chr2:17564418-17564437 None:intergenic 50.0%
GGACAAGAAGTCGTCCCTGT+GGG + Chr2:17565586-17565605 None:intergenic 55.0%
AGGGACGACTTCTTGTCCCG+AGG - Chr2:17565588-17565607 MsG0280007581.01.T01:CDS 60.0%
GGGACAAGAAGTCGTCCCTG+TGG + Chr2:17565587-17565606 None:intergenic 60.0%
CCTCGTCGCCATCTCCACTG+GGG - Chr2:17564120-17564139 MsG0280007581.01.T01:intron 65.0%
GCCTCGTCGCCATCTCCACT+GGG - Chr2:17564119-17564138 MsG0280007581.01.T01:intron 65.0%
CCCCAGTGGAGATGGCGACG+AGG + Chr2:17564123-17564142 None:intergenic 70.0%
GGCCTCGTCGCCATCTCCAC+TGG - Chr2:17564118-17564137 MsG0280007581.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 17564094 17565629 17564094 ID=MsG0280007581.01;Name=MsG0280007581.01
Chr2 mRNA 17564094 17565629 17564094 ID=MsG0280007581.01.T01;Parent=MsG0280007581.01;Name=MsG0280007581.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|315
Chr2 exon 17564722 17565629 17564722 ID=MsG0280007581.01.T01:exon:10630;Parent=MsG0280007581.01.T01
Chr2 exon 17564094 17564133 17564094 ID=MsG0280007581.01.T01:exon:10629;Parent=MsG0280007581.01.T01
Chr2 CDS 17564722 17565629 17564722 ID=MsG0280007581.01.T01:cds;Parent=MsG0280007581.01.T01
Chr2 CDS 17564094 17564133 17564094 ID=MsG0280007581.01.T01:cds;Parent=MsG0280007581.01.T01
Gene Sequence

>MsG0280007581.01.T01

ATGTCTCTTATCGGTTCATGCAAGGGCCTCGTCGCCATCTCCACTGGGGTAATCGTTTTCACGCATCCTGACAACCCCAACGAAATCACAATCTGGAACCCTAACACCCGTAAACATCACACTATCCCTTTTCTCCCTCTTCCTATTCCTATTCTTAACTACGACGACAAATGCTCCTTATGCGTTCATGGCTTCGGTTTTGATCAATTAACCGGTGATTACAAACTACTTAGAATCTCTCACTTACTCGATCTAGAAAACCCTTTTTATGATCCACAAGTGAGACTCTTCAGCTTGAAAACAAACTCCTGGAAGATAATTCCTGCTATGCCGTACGATCTTCAACATTTATACGATTTGGGGGTTTTTGTTGAGAATTCTATTCACTGGATTATGACCAAGAAACTTGATGGGTTACATCCTTCTTTAATTGTTGCCTTTAACCTCACACTTGAAATTTTCAATGAGGTTCCTCTTCCTGATGAAATAGGTGAAGAAGTTAATGGTGAGAGTTTTGAAGTTCATGTTGCTGTTTTGGGAGAGTGTCTTTGTATCACTGTGGATTATAAAACTAAAATTGATGTTTGGGTGATGAAAGAATATGGATGTAGAGATAGTTGGTGTAAACTTTTTACTATAGATGAGTCGTGTTTCGATTTACCTTTGAAATTGTTGAGGCCCATATGTTATTCTAGTGATGGAAGGAAGGTTCTGTTGGAAAGAGTTCATGTTTTGTTGGAGGTGCAGCATAGGAAGCTGTTTTGGTATGATTTGAAGAGTGAACAAATTAGTCATGTTGAAGGAATTCCTAATCTGAATGAAGCTATGTTTTGTGTTGGAAGTCTTGTCCCACCTTCCTTCCCTGTTGATAATCGTAGGAAGAAGGAGAATCATCCAAGCAAGAGAAGGGACGACTTCTTGTCCCGAGGATTTAAATTGAGATTGTAA
Protein sequence

>MsG0280007581.01.T01

MSLIGSCKGLVAISTGVIVFTHPDNPNEITIWNPNTRKHHTIPFLPLPIPILNYDDKCSLCVHGFGFDQLTGDYKLLRISHLLDLENPFYDPQVRLFSLKTNSWKIIPAMPYDLQHLYDLGVFVENSIHWIMTKKLDGLHPSLIVAFNLTLEIFNEVPLPDEIGEEVNGESFEVHVAVLGECLCITVDYKTKIDVWVMKEYGCRDSWCKLFTIDESCFDLPLKLLRPICYSSDGRKVLLERVHVLLEVQHRKLFWYDLKSEQISHVEGIPNLNEAMFCVGSLVPPSFPVDNRRKKENHPSKRRDDFLSRGFKLRL*