AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016277.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016277.01.T01 MTR_2g024110 55.291 378 134 12 1 352 1 369 5.59e-123 360
MsG0380016277.01.T01 MTR_5g083940 56.868 364 96 11 1 359 1 308 1.70e-115 339
MsG0380016277.01.T01 MTR_2g031680 52.442 389 133 11 4 357 6 377 1.32e-113 336
MsG0380016277.01.T01 MTR_4g006270 53.050 377 132 12 1 352 1 357 1.43e-110 329
MsG0380016277.01.T01 MTR_2g026010 52.051 390 136 12 1 357 1 372 1.12e-109 327
MsG0380016277.01.T01 MTR_2g031640 51.436 383 139 12 4 357 6 370 2.59e-109 325
MsG0380016277.01.T01 MTR_2g028110 50.129 389 141 12 1 357 1 368 7.44e-109 324
MsG0380016277.01.T01 MTR_2g031720 50.627 399 140 13 1 357 1 384 4.47e-108 322
MsG0380016277.01.T01 MTR_1g068875 50.388 387 143 13 1 357 1 368 1.46e-105 315
MsG0380016277.01.T01 MTR_1g068860 50.380 395 146 14 1 363 1 377 1.55e-105 315
MsG0380016277.01.T01 MTR_2g028130 47.619 420 148 16 2 361 3 410 9.12e-104 312
MsG0380016277.01.T01 MTR_1g068835 49.612 387 147 14 1 357 1 369 7.85e-103 308
MsG0380016277.01.T01 MTR_2g426090 47.716 394 146 12 7 357 9 385 5.35e-101 305
MsG0380016277.01.T01 MTR_2g425980 47.115 416 147 15 2 361 3 401 1.37e-100 304
MsG0380016277.01.T01 MTR_0667s0010 47.980 396 150 15 4 357 6 387 2.28e-99 300
MsG0380016277.01.T01 MTR_2g025420 45.721 409 156 14 4 357 6 403 3.75e-97 295
MsG0380016277.01.T01 MTR_8g099460 48.082 391 150 15 3 357 4 377 2.46e-94 287
MsG0380016277.01.T01 MTR_3g083010 45.519 424 148 16 4 358 6 415 3.59e-93 285
MsG0380016277.01.T01 MTR_2g021050 46.750 400 152 14 2 360 3 382 2.87e-92 281
MsG0380016277.01.T01 MTR_2g024100 47.520 383 145 15 19 357 22 392 3.08e-92 282
MsG0380016277.01.T01 MTR_2g426020 44.039 411 166 14 4 363 6 403 1.67e-90 278
MsG0380016277.01.T01 MTR_2g426070 45.813 406 150 15 2 357 3 388 2.00e-90 277
MsG0380016277.01.T01 MTR_2g028160 42.998 407 172 12 2 357 3 400 9.03e-88 271
MsG0380016277.01.T01 MTR_2g028140 44.310 413 154 15 2 357 3 396 7.14e-87 269
MsG0380016277.01.T01 MTR_2g426060 45.387 401 153 17 4 357 6 387 9.62e-87 268
MsG0380016277.01.T01 MTR_4g070550 42.118 406 167 13 2 356 3 391 1.32e-76 242
MsG0380016277.01.T01 MTR_3g086960 76.582 158 32 3 193 350 1 153 5.10e-74 227
MsG0380016277.01.T01 MTR_4g133170 39.474 380 187 12 1 354 1 363 1.20e-70 226
MsG0380016277.01.T01 MTR_2g031700 54.148 229 87 4 4 215 6 233 2.50e-70 222
MsG0380016277.01.T01 MTR_3g086970 63.684 190 48 4 1 189 1 170 7.00e-68 212
MsG0380016277.01.T01 MTR_1g068905 39.793 387 134 12 1 363 1 312 1.60e-67 216
MsG0380016277.01.T01 MTR_2g025960 43.689 309 128 12 83 357 1 297 6.21e-65 209
MsG0380016277.01.T01 MTR_2g040050 45.968 248 88 10 64 286 15 241 7.16e-53 176
MsG0380016277.01.T01 MTR_2g022170 68.595 121 34 2 1 117 1 121 7.19e-50 164
MsG0380016277.01.T01 MTR_2g037520 51.266 158 61 6 181 331 1 149 8.91e-35 126
MsG0380016277.01.T01 MTR_4g061340 32.000 300 157 13 4 267 26 314 2.53e-31 122
MsG0380016277.01.T01 MTR_3g006670 32.095 296 160 11 4 267 49 335 3.19e-30 120
MsG0380016277.01.T01 MTR_7g110360 56.911 123 45 3 1 115 36 158 8.20e-30 117
MsG0380016277.01.T01 MTR_7g110360 47.009 117 56 3 228 344 206 316 3.06e-22 96.3
MsG0380016277.01.T01 MTR_3g014540 28.767 292 174 10 4 267 29 314 6.28e-29 115
MsG0380016277.01.T01 MTR_4g031770 30.345 290 173 11 1 265 1 286 4.60e-28 113
MsG0380016277.01.T01 MTR_3g014570 27.329 322 199 9 4 297 29 343 7.58e-28 112
MsG0380016277.01.T01 MTR_3g007330 30.847 295 157 12 4 267 48 326 1.35e-27 112
MsG0380016277.01.T01 MTR_3g010390 30.225 311 163 12 4 268 33 335 2.48e-27 112
MsG0380016277.01.T01 MTR_2g021150 29.492 295 172 12 4 267 14 303 8.28e-27 110
MsG0380016277.01.T01 MTR_6g065980 27.113 284 177 8 4 269 16 287 1.24e-26 109
MsG0380016277.01.T01 MTR_3g013770 29.195 298 169 13 4 267 33 322 7.58e-26 107
MsG0380016277.01.T01 MTR_5g046300 26.053 380 219 16 1 352 1 346 1.48e-25 106
MsG0380016277.01.T01 MTR_5g046290 26.053 380 219 16 1 352 1 346 1.48e-25 106
MsG0380016277.01.T01 MTR_0044s0300 26.316 380 212 15 4 344 38 388 2.70e-25 105
MsG0380016277.01.T01 MTR_2g078900 29.210 291 166 15 4 266 33 311 3.66e-25 105
MsG0380016277.01.T01 MTR_2g029990 27.628 333 188 16 5 300 52 368 4.72e-25 105
MsG0380016277.01.T01 MTR_2g021190 28.313 332 185 16 4 298 21 336 8.29e-25 104
MsG0380016277.01.T01 MTR_2g021155 28.660 321 195 12 7 300 39 352 8.31e-25 106
MsG0380016277.01.T01 MTR_3g009240 28.621 290 171 13 4 267 36 315 1.02e-24 104
MsG0380016277.01.T01 MTR_7g013590 28.966 290 172 12 7 267 39 323 1.65e-24 103
MsG0380016277.01.T01 MTR_3g036290 27.077 325 195 10 4 304 22 328 2.71e-24 102
MsG0380016277.01.T01 MTR_2g046900 28.188 298 171 12 4 266 28 317 4.88e-24 102
MsG0380016277.01.T01 MTR_3g007430 28.743 334 182 17 7 304 46 359 7.09e-24 102
MsG0380016277.01.T01 MTR_3g013740 28.617 311 166 16 2 267 42 341 7.48e-24 102
MsG0380016277.01.T01 MTR_1g056710 27.072 362 214 14 1 323 31 381 1.08e-23 101
MsG0380016277.01.T01 MTR_5g011200 26.599 297 172 10 4 265 17 302 2.67e-23 100
MsG0380016277.01.T01 MTR_1g097560 29.452 292 168 14 4 271 36 313 3.59e-23 99.8
MsG0380016277.01.T01 MTR_3g009310 28.136 295 170 10 4 267 42 325 4.11e-23 99.8
MsG0380016277.01.T01 MTR_2g046830 30.169 295 153 13 7 265 28 305 6.95e-23 99.4
MsG0380016277.01.T01 MTR_2g025440 46.154 130 61 5 228 357 3 123 7.31e-23 95.9
MsG0380016277.01.T01 MTR_1g097330 27.972 286 177 12 4 266 16 295 1.44e-22 98.6
MsG0380016277.01.T01 MTR_8g101580 28.082 292 179 12 1 266 42 328 1.85e-22 98.2
MsG0380016277.01.T01 MTR_3g036430 25.683 366 209 14 1 344 17 341 1.92e-22 97.4
MsG0380016277.01.T01 MTR_2g046920 28.000 300 159 14 4 265 24 304 3.60e-22 97.1
MsG0380016277.01.T01 MTR_1g094210 27.742 310 180 14 4 285 57 350 9.31e-22 95.9
MsG0380016277.01.T01 MTR_1g094210 27.742 310 180 14 4 285 57 350 1.08e-21 95.9
MsG0380016277.01.T01 MTR_5g022420 27.305 282 178 9 4 267 27 299 1.09e-21 95.5
MsG0380016277.01.T01 MTR_1g088120 28.481 316 163 13 7 265 13 322 1.12e-21 95.9
MsG0380016277.01.T01 MTR_2g047832 26.168 321 160 12 4 266 29 330 1.23e-21 95.9
MsG0380016277.01.T01 MTR_1g055375 26.426 333 197 14 1 295 1 323 1.39e-21 95.1
MsG0380016277.01.T01 MTR_6g004660 29.934 304 165 13 4 266 16 312 2.48e-21 94.7
MsG0380016277.01.T01 MTR_7g056570 29.513 349 168 14 4 295 18 345 3.32e-21 94.7
MsG0380016277.01.T01 MTR_3g011100 27.410 332 194 11 4 296 235 558 3.34e-21 95.5
MsG0380016277.01.T01 MTR_4g055060 26.036 338 202 13 4 304 30 356 4.08e-21 94.0
MsG0380016277.01.T01 MTR_3g007360 28.866 291 169 12 7 267 55 337 4.30e-21 94.4
MsG0380016277.01.T01 MTR_2g055970 25.694 288 183 9 4 265 211 493 4.48e-21 95.1
MsG0380016277.01.T01 MTR_3g007300 28.622 283 159 12 1 267 46 301 5.13e-21 93.6
MsG0380016277.01.T01 MTR_3g034160 25.338 296 183 10 4 264 9 301 5.45e-21 93.6
MsG0380016277.01.T01 MTR_7g110370 57.647 85 29 3 215 295 16 97 8.89e-21 90.5
MsG0380016277.01.T01 MTR_3g034180 26.689 296 179 11 4 264 123 415 9.17e-21 94.0
MsG0380016277.01.T01 MTR_3g006570 27.682 289 177 10 4 266 21 303 9.71e-21 92.8
MsG0380016277.01.T01 MTR_3g007410 28.522 291 170 12 7 267 55 337 1.35e-20 92.8
MsG0380016277.01.T01 MTR_0760s0010 28.975 283 160 13 10 266 53 320 1.70e-20 92.4
MsG0380016277.01.T01 MTR_3g024150 28.333 300 154 14 7 267 38 315 2.21e-20 92.0
MsG0380016277.01.T01 MTR_6g053260 27.961 304 166 13 1 266 334 622 2.93e-20 92.8
MsG0380016277.01.T01 MTR_1g097490 29.617 287 170 13 4 266 49 327 3.07e-20 91.7
MsG0380016277.01.T01 MTR_4g030830 25.424 354 197 11 1 295 6 351 3.70e-20 91.3
MsG0380016277.01.T01 MTR_5g057710 28.239 301 162 12 4 267 46 329 4.42e-20 91.3
MsG0380016277.01.T01 MTR_3g030240 25.978 358 203 16 4 335 40 361 6.18e-20 90.5
MsG0380016277.01.T01 MTR_4g108820 25.735 272 166 12 4 266 42 286 6.95e-20 89.7
MsG0380016277.01.T01 MTR_2g461450 25.836 329 199 13 1 295 15 332 7.85e-20 90.1
MsG0380016277.01.T01 MTR_4g023120 29.310 290 171 11 3 264 2 285 8.83e-20 90.1
MsG0380016277.01.T01 MTR_1g055135 28.239 301 172 12 4 268 13 305 1.02e-19 89.7
MsG0380016277.01.T01 MTR_3g009300 28.966 290 138 13 7 267 37 287 1.07e-19 89.7
MsG0380016277.01.T01 MTR_5g046260 26.389 288 163 11 1 270 1 257 1.09e-19 88.6
MsG0380016277.01.T01 MTR_2g047892 27.044 318 171 10 4 271 22 328 1.27e-19 89.7
MsG0380016277.01.T01 MTR_7g017170 26.061 330 164 14 2 266 16 330 1.28e-19 90.1
MsG0380016277.01.T01 MTR_4g030090 25.946 370 211 16 5 326 15 369 1.33e-19 89.7
MsG0380016277.01.T01 MTR_4g102410 26.994 326 171 16 4 266 61 382 1.40e-19 90.1
MsG0380016277.01.T01 MTR_5g057790 28.025 314 176 13 4 281 46 345 1.54e-19 89.7
MsG0380016277.01.T01 MTR_7g017130 26.061 330 164 14 2 266 16 330 1.65e-19 89.4
MsG0380016277.01.T01 MTR_3g030350 25.959 339 206 15 4 313 35 357 1.93e-19 89.4
MsG0380016277.01.T01 MTR_3g024040 27.737 274 173 12 10 266 37 302 2.16e-19 89.0
MsG0380016277.01.T01 MTR_3g007270 25.902 305 174 9 4 266 47 341 2.64e-19 89.0
MsG0380016277.01.T01 MTR_3g024130 28.571 231 139 9 85 298 58 279 2.79e-19 87.8
MsG0380016277.01.T01 MTR_6g048120 25.215 349 189 14 4 301 36 363 3.24e-19 89.0
MsG0380016277.01.T01 MTR_8g467140 24.296 284 192 8 4 265 32 314 3.75e-19 87.8
MsG0380016277.01.T01 MTR_3g103020 27.740 292 172 11 4 264 20 303 4.09e-19 88.2
MsG0380016277.01.T01 MTR_3g011060 25.733 307 174 12 4 267 28 323 5.05e-19 88.2
MsG0380016277.01.T01 MTR_7g079160 25.369 406 196 18 7 323 11 398 6.26e-19 88.2
MsG0380016277.01.T01 MTR_6g027910 26.331 338 186 18 7 297 12 333 6.77e-19 87.4
MsG0380016277.01.T01 MTR_2g021210 28.819 288 167 11 4 266 84 358 6.99e-19 87.8
MsG0380016277.01.T01 MTR_7g066840 25.352 355 184 14 4 297 23 357 7.06e-19 87.8
MsG0380016277.01.T01 MTR_5g007610 26.756 299 180 8 4 267 41 335 7.18e-19 87.8
MsG0380016277.01.T01 MTR_7g407070 25.574 305 184 10 4 266 32 335 7.54e-19 87.8
MsG0380016277.01.T01 MTR_1g050542 29.021 286 168 12 4 265 58 332 8.10e-19 87.4
MsG0380016277.01.T01 MTR_6g007135 26.936 297 173 13 7 266 29 318 1.02e-18 87.0
MsG0380016277.01.T01 MTR_7g070830 25.982 331 177 14 2 266 19 347 1.16e-18 87.4
MsG0380016277.01.T01 MTR_1g054575 26.224 286 178 11 4 265 52 328 1.17e-18 87.8
MsG0380016277.01.T01 MTR_2g078850 24.198 343 214 15 7 322 33 356 1.19e-18 86.7
MsG0380016277.01.T01 MTR_3g010520 26.644 289 163 13 4 267 25 289 1.51e-18 86.3
MsG0380016277.01.T01 MTR_7g070880 26.190 336 180 14 2 271 19 352 1.60e-18 86.7
MsG0380016277.01.T01 MTR_7g061060 24.642 349 189 12 4 295 13 344 1.65e-18 86.7
MsG0380016277.01.T01 MTR_7g077990 26.923 338 173 16 4 283 17 338 2.10e-18 86.3
MsG0380016277.01.T01 MTR_3g009260 26.074 326 193 13 7 302 44 351 3.59e-18 85.5
MsG0380016277.01.T01 MTR_3g058470 27.841 352 175 16 1 307 34 351 4.00e-18 85.1
MsG0380016277.01.T01 MTR_6g053240 25.407 307 175 11 1 266 25 318 4.07e-18 85.5
MsG0380016277.01.T01 MTR_2g021800 26.608 342 166 13 4 266 16 351 5.06e-18 85.5
MsG0380016277.01.T01 MTR_4g122850 27.273 286 164 11 15 264 12 289 5.25e-18 85.1
MsG0380016277.01.T01 MTR_4g023070 28.028 289 176 10 3 264 2 285 5.53e-18 84.7
MsG0380016277.01.T01 MTR_7g028660 27.826 345 191 14 4 301 11 344 7.96e-18 84.3
MsG0380016277.01.T01 MTR_7g056003 23.562 365 192 14 7 301 18 365 9.12e-18 84.3
MsG0380016277.01.T01 MTR_3g024110 25.263 285 181 10 4 266 101 375 1.28e-17 84.3
MsG0380016277.01.T01 MTR_3g010870 26.207 290 172 10 4 265 37 312 1.41e-17 83.6
MsG0380016277.01.T01 MTR_0242s0060 25.767 326 165 13 4 265 9 321 1.43e-17 84.0
MsG0380016277.01.T01 MTR_0242s0040 25.767 326 165 13 4 265 9 321 1.43e-17 84.0
MsG0380016277.01.T01 MTR_5g070080 26.623 308 173 9 4 264 10 311 1.46e-17 83.6
MsG0380016277.01.T01 MTR_7g070440 25.246 305 188 11 4 271 7 308 1.50e-17 83.6
MsG0380016277.01.T01 MTR_7g061090 25.519 337 162 13 4 271 22 338 1.54e-17 84.0
MsG0380016277.01.T01 MTR_4g023080 25.352 284 178 10 4 264 9 281 1.68e-17 83.2
MsG0380016277.01.T01 MTR_4g107820 25.084 299 173 9 2 266 34 315 1.82e-17 83.6
MsG0380016277.01.T01 MTR_4g107780 25.084 299 173 9 2 266 34 315 1.82e-17 83.6
MsG0380016277.01.T01 MTR_4g107820 25.084 299 173 9 2 266 34 315 1.83e-17 83.6
MsG0380016277.01.T01 MTR_4g107780 25.084 299 173 9 2 266 34 315 1.93e-17 83.6
MsG0380016277.01.T01 MTR_5g009060 26.646 319 177 12 4 267 25 341 1.98e-17 83.6
MsG0380016277.01.T01 MTR_3g034130 25.000 296 184 12 4 264 9 301 2.27e-17 82.8
MsG0380016277.01.T01 MTR_6g021880 27.526 287 172 11 15 267 31 315 2.64e-17 82.8
MsG0380016277.01.T01 MTR_3g010920 26.056 284 172 10 4 267 44 309 2.74e-17 82.8
MsG0380016277.01.T01 MTR_3g083640 27.211 294 171 13 1 265 52 331 2.89e-17 82.8
MsG0380016277.01.T01 MTR_4g019990 25.852 352 190 17 4 295 6 346 4.06e-17 82.4
MsG0380016277.01.T01 MTR_2g022000 25.882 340 170 12 4 266 16 350 4.22e-17 82.8
MsG0380016277.01.T01 MTR_4g116330 28.082 292 168 12 4 264 23 303 4.89e-17 82.0
MsG0380016277.01.T01 MTR_6g013270 26.087 299 176 11 4 267 29 317 5.25e-17 82.0
MsG0380016277.01.T01 MTR_3g436150 26.934 349 190 15 4 304 32 363 5.54e-17 82.0
MsG0380016277.01.T01 MTR_3g036335 25.170 294 179 11 4 266 41 324 6.55e-17 82.0
MsG0380016277.01.T01 MTR_3g010430 26.246 301 168 11 4 266 36 320 7.67e-17 81.6
MsG0380016277.01.T01 MTR_4g013180 24.920 313 175 14 5 266 12 315 9.01e-17 82.0
MsG0380016277.01.T01 MTR_7g078840 26.970 330 166 15 5 262 11 337 1.02e-16 81.6
MsG0380016277.01.T01 MTR_7g056290 27.190 331 158 17 7 271 25 338 1.21e-16 81.3
MsG0380016277.01.T01 MTR_0054s0090 27.628 333 163 17 4 267 17 340 1.26e-16 81.3
MsG0380016277.01.T01 MTR_3g072470 26.970 330 159 16 7 271 22 334 1.39e-16 80.9
MsG0380016277.01.T01 MTR_1g442850 27.072 362 171 16 1 295 2 337 1.78e-16 80.5
MsG0380016277.01.T01 MTR_4g024890 25.962 312 176 14 5 271 11 312 2.83e-16 79.7
MsG0380016277.01.T01 MTR_3g010970 25.763 295 159 11 7 267 51 319 2.91e-16 79.7
MsG0380016277.01.T01 MTR_7g056737 28.662 314 152 14 4 266 22 314 3.06e-16 80.1
MsG0380016277.01.T01 MTR_2g078870 26.941 219 130 13 65 266 29 234 3.26e-16 79.0
MsG0380016277.01.T01 MTR_7g061050 25.159 314 177 10 4 271 13 314 3.56e-16 79.7
MsG0380016277.01.T01 MTR_8g046310 28.146 302 177 12 1 266 13 310 3.91e-16 79.3
MsG0380016277.01.T01 MTR_7g056710 25.635 394 208 16 4 344 18 379 4.24e-16 79.3
MsG0380016277.01.T01 MTR_2g021252 26.481 287 166 11 7 266 50 318 4.58e-16 79.3
MsG0380016277.01.T01 MTR_3g011020 25.085 295 172 9 4 267 28 304 5.87e-16 79.0
MsG0380016277.01.T01 MTR_2g437190 56.579 76 29 2 46 117 56 131 6.09e-16 75.1
MsG0380016277.01.T01 MTR_4g023130 25.368 272 152 9 4 264 9 240 7.41e-16 77.8
MsG0380016277.01.T01 MTR_7g056200 25.070 355 177 14 4 302 23 344 1.18e-15 78.2
MsG0380016277.01.T01 MTR_4g109270 28.041 296 166 15 3 264 7 289 1.35e-15 77.8
MsG0380016277.01.T01 MTR_4g109280 25.088 283 187 9 4 266 8 285 1.67e-15 77.4
MsG0380016277.01.T01 MTR_6g004210 26.433 314 169 15 15 270 36 345 1.88e-15 77.8
MsG0380016277.01.T01 MTR_5g046280 24.199 281 163 12 88 352 3 249 2.01e-15 75.9
MsG0380016277.01.T01 MTR_1g015740 28.383 303 172 10 4 296 8 275 2.37e-15 76.6
MsG0380016277.01.T01 MTR_6g092560 25.762 361 187 18 4 298 12 357 2.47e-15 77.4
MsG0380016277.01.T01 MTR_3g464470 24.633 341 199 16 4 295 7 338 2.63e-15 77.0
MsG0380016277.01.T01 MTR_8g066440 24.571 350 194 11 5 295 24 362 3.15e-15 77.0
MsG0380016277.01.T01 MTR_4g117780 26.871 294 176 12 1 264 8 292 3.44e-15 76.6
MsG0380016277.01.T01 MTR_5g097210 27.797 295 173 12 4 268 9 293 3.76e-15 76.3
MsG0380016277.01.T01 MTR_4g021785 25.685 292 168 11 4 264 9 282 4.73e-15 75.9
MsG0380016277.01.T01 MTR_4g023090 24.667 300 170 10 4 264 16 298 5.77e-15 75.9
MsG0380016277.01.T01 MTR_4g094365 26.370 292 175 11 4 264 8 290 6.05e-15 75.9
MsG0380016277.01.T01 MTR_1g055055 27.027 296 157 13 4 268 26 293 7.33e-15 75.1
MsG0380016277.01.T01 MTR_7g056390 26.586 331 160 17 7 271 21 334 8.64e-15 75.5
MsG0380016277.01.T01 MTR_5g070130 26.689 296 171 11 7 264 14 301 9.86e-15 75.1
MsG0380016277.01.T01 MTR_1g007410 24.468 376 208 14 4 323 22 377 1.02e-14 75.5
MsG0380016277.01.T01 MTR_8g064890 25.000 320 173 12 2 266 14 321 1.09e-14 75.1
MsG0380016277.01.T01 MTR_4g030790 24.920 313 164 15 4 283 19 293 1.10e-14 74.7
MsG0380016277.01.T01 MTR_7g056820 26.437 348 199 16 4 304 7 344 1.27e-14 74.7
MsG0380016277.01.T01 MTR_4g030760 27.891 294 162 12 6 266 75 351 1.36e-14 75.1
MsG0380016277.01.T01 MTR_2g047200 25.698 358 180 18 4 302 20 350 1.42e-14 74.7
MsG0380016277.01.T01 MTR_6g060650 27.907 301 175 12 4 268 8 302 1.57e-14 74.7
MsG0380016277.01.T01 MTR_6g079810 24.848 330 178 13 4 266 70 396 1.58e-14 75.1
MsG0380016277.01.T01 MTR_4g028750 25.000 320 181 11 4 267 16 332 2.26e-14 74.3
MsG0380016277.01.T01 MTR_3g023930 25.177 282 175 11 4 267 34 297 2.35e-14 73.9
MsG0380016277.01.T01 MTR_8g033090 24.706 340 174 12 4 267 14 347 3.28e-14 73.9
MsG0380016277.01.T01 MTR_7g078860 24.367 316 175 9 5 265 10 316 3.63e-14 73.6
MsG0380016277.01.T01 MTR_4g037465 26.012 346 187 15 4 295 21 351 8.49e-14 72.4
MsG0380016277.01.T01 MTR_2g046800 24.299 321 174 12 4 265 14 324 9.58e-14 72.4
MsG0380016277.01.T01 MTR_6g090180 25.145 346 179 14 4 278 47 383 1.05e-13 72.4
MsG0380016277.01.T01 MTR_8g467670 25.559 313 173 14 4 268 14 314 1.11e-13 72.0
MsG0380016277.01.T01 MTR_3g464500 23.962 313 185 14 4 271 27 331 1.14e-13 72.0
MsG0380016277.01.T01 MTR_3g006500 24.832 298 173 13 4 266 17 298 1.40e-13 71.6
MsG0380016277.01.T01 MTR_7g017040 26.462 325 172 17 4 268 16 333 1.44e-13 72.0
MsG0380016277.01.T01 MTR_7g077970 26.006 323 172 13 4 265 7 323 1.59e-13 71.6
MsG0380016277.01.T01 MTR_6g007150 28.319 226 131 11 65 267 47 264 1.63e-13 71.2
MsG0380016277.01.T01 MTR_7g091630 24.923 325 177 14 4 271 32 346 1.72e-13 71.6
MsG0380016277.01.T01 MTR_1g055070 26.357 258 150 10 1 218 46 303 1.74e-13 71.6
MsG0380016277.01.T01 MTR_7g066060 26.115 314 176 16 4 266 23 331 1.77e-13 72.0
MsG0380016277.01.T01 MTR_4g129190 24.457 368 190 16 3 301 5 353 2.37e-13 71.2
MsG0380016277.01.T01 MTR_7g055987 26.263 297 163 13 7 262 23 304 2.59e-13 70.9
MsG0380016277.01.T01 MTR_4g130330 24.688 320 181 16 4 266 7 323 2.88e-13 70.9
MsG0380016277.01.T01 MTR_0128s0010 25.806 310 172 15 4 265 21 320 3.16e-13 70.9
MsG0380016277.01.T01 MTR_1g115185 26.645 304 160 15 7 267 42 325 3.28e-13 70.9
MsG0380016277.01.T01 MTR_4g028510 26.786 336 157 15 4 266 16 335 3.60e-13 70.9
MsG0380016277.01.T01 MTR_1g100763 23.723 274 163 10 9 263 3 249 3.61e-13 69.7
MsG0380016277.01.T01 MTR_7g056717 27.653 311 147 15 10 266 28 314 4.46e-13 70.1
MsG0380016277.01.T01 MTR_3g058440 26.449 276 148 12 1 230 32 298 4.80e-13 69.7
MsG0380016277.01.T01 MTR_8g013010 26.667 240 134 9 4 210 54 284 5.23e-13 69.3
MsG0380016277.01.T01 MTR_3g013950 25.141 354 197 15 7 302 9 352 5.85e-13 70.1
MsG0380016277.01.T01 MTR_4g033495 23.734 316 172 11 4 264 27 328 6.15e-13 70.1
MsG0380016277.01.T01 MTR_7g066850 25.000 312 173 12 4 267 23 321 6.43e-13 70.1
MsG0380016277.01.T01 MTR_7g016930 25.959 339 180 16 4 301 16 324 6.54e-13 69.3
MsG0380016277.01.T01 MTR_7g066080 24.843 318 175 13 4 266 16 324 6.79e-13 70.1
MsG0380016277.01.T01 MTR_7g060940 24.214 318 168 11 4 266 22 321 7.40e-13 69.7
MsG0380016277.01.T01 MTR_5g096710 24.430 307 177 13 4 264 23 320 7.61e-13 69.7
MsG0380016277.01.T01 MTR_8g032390 24.028 283 173 9 4 264 40 302 8.27e-13 69.3
MsG0380016277.01.T01 MTR_8g012090 24.104 307 165 11 4 266 16 298 8.54e-13 68.9
MsG0380016277.01.T01 MTR_7g066000 24.051 316 187 11 4 271 25 335 9.09e-13 69.3
MsG0380016277.01.T01 MTR_4g023380 25.260 289 160 11 18 264 30 304 1.07e-12 68.9
MsG0380016277.01.T01 MTR_8g033110 25.588 340 173 15 4 267 14 349 1.08e-12 69.3
MsG0380016277.01.T01 MTR_0115s0020 26.646 319 180 16 1 267 7 323 1.19e-12 68.9
MsG0380016277.01.T01 MTR_5g096910 25.234 321 173 15 2 266 15 324 1.22e-12 68.9
MsG0380016277.01.T01 MTR_6g017280 23.055 347 211 12 4 299 9 350 1.73e-12 68.6
MsG0380016277.01.T01 MTR_7g060960 22.642 318 198 9 4 296 32 326 1.79e-12 68.2
MsG0380016277.01.T01 MTR_4g117550 23.514 370 193 18 4 324 17 345 2.32e-12 68.2
MsG0380016277.01.T01 MTR_7g056503 24.438 356 221 13 4 313 21 374 2.59e-12 68.2
MsG0380016277.01.T01 MTR_0649s0020 26.542 373 188 20 2 309 9 360 2.83e-12 67.8
MsG0380016277.01.T01 MTR_5g074850 23.636 330 179 13 4 267 35 357 2.90e-12 68.6
MsG0380016277.01.T01 MTR_1g007450 25.228 329 173 14 2 266 10 329 2.95e-12 67.8
MsG0380016277.01.T01 MTR_6g048140 22.476 307 180 10 1 266 36 325 3.34e-12 67.8
MsG0380016277.01.T01 MTR_8g073550 28.723 188 108 7 4 168 30 214 3.40e-12 65.9
MsG0380016277.01.T01 MTR_2g021950 23.926 326 184 16 1 267 13 333 3.98e-12 67.4
MsG0380016277.01.T01 MTR_3g080370 24.351 308 164 13 18 266 35 332 4.57e-12 67.4
MsG0380016277.01.T01 MTR_6g055210 24.921 317 178 13 4 266 22 332 5.39e-12 67.4
MsG0380016277.01.T01 MTR_5g097220 24.629 337 172 13 3 266 12 339 6.73e-12 66.6
MsG0380016277.01.T01 MTR_4g023440 26.573 286 141 13 4 264 18 259 7.90e-12 66.2
MsG0380016277.01.T01 MTR_6g027890 25.424 236 126 11 72 267 34 259 9.63e-12 65.9
MsG0380016277.01.T01 MTR_2g025995 70.455 44 13 0 4 47 6 49 9.88e-12 64.7
MsG0380016277.01.T01 MTR_5g092850 24.074 324 180 13 4 267 16 333 1.08e-11 66.2
MsG0380016277.01.T01 MTR_3g083660 23.944 213 143 7 92 301 45 241 1.34e-11 65.1
MsG0380016277.01.T01 MTR_3g058480 25.692 253 147 10 1 218 36 282 1.42e-11 65.5
MsG0380016277.01.T01 MTR_2g065860 23.885 314 184 12 4 266 12 321 1.46e-11 65.9
MsG0380016277.01.T01 MTR_5g097350 24.375 320 156 15 13 267 25 323 1.72e-11 65.5
MsG0380016277.01.T01 MTR_7g057270 24.265 408 221 20 4 344 26 412 1.95e-11 65.5
MsG0380016277.01.T01 MTR_1g029650 23.209 349 205 12 4 296 8 349 2.06e-11 65.5
MsG0380016277.01.T01 MTR_2g010950 23.659 317 183 10 7 271 23 332 2.06e-11 65.5
MsG0380016277.01.T01 MTR_7g066100 21.535 404 238 15 4 347 11 395 2.32e-11 65.1
MsG0380016277.01.T01 MTR_5g097330 22.699 326 179 11 6 266 18 335 2.48e-11 65.1
MsG0380016277.01.T01 MTR_3g006640 24.757 206 126 7 86 267 19 219 2.68e-11 64.3
MsG0380016277.01.T01 MTR_4g117770 24.653 288 178 11 7 264 14 292 3.57e-11 64.3
MsG0380016277.01.T01 MTR_4g117810 24.653 288 178 11 7 264 14 292 3.57e-11 64.3
MsG0380016277.01.T01 MTR_7g091640 24.367 316 174 15 4 265 35 339 4.08e-11 64.3
MsG0380016277.01.T01 MTR_4g116330 25.606 289 140 11 4 264 23 264 4.73e-11 63.9
MsG0380016277.01.T01 MTR_3g023940 22.796 329 201 11 4 296 34 345 5.48e-11 63.9
MsG0380016277.01.T01 MTR_8g433040 25.773 291 170 12 4 264 18 292 8.66e-11 63.2
MsG0380016277.01.T01 MTR_8g032380 25.773 291 170 12 4 264 18 292 8.66e-11 63.2
MsG0380016277.01.T01 MTR_2g047878 25.168 298 175 13 4 271 21 300 8.86e-11 63.2
MsG0380016277.01.T01 MTR_1g023400 23.546 361 229 15 7 334 6 352 8.97e-11 63.2
MsG0380016277.01.T01 MTR_4g023190 24.150 294 171 10 4 264 10 284 9.90e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016277.01.T01 AT4G12560 30.909 385 212 16 1 346 1 370 9.01e-39 143
MsG0380016277.01.T01 AT4G12560 30.909 385 212 16 1 346 1 370 9.01e-39 143
MsG0380016277.01.T01 AT4G12560 30.909 385 212 16 1 346 1 370 9.01e-39 143
MsG0380016277.01.T01 AT3G06240 28.032 371 176 16 4 304 36 385 4.30e-27 111
MsG0380016277.01.T01 AT4G22390 27.487 382 225 16 1 346 1 366 3.85e-25 105
MsG0380016277.01.T01 AT4G22390 27.487 382 225 16 1 346 1 366 4.43e-25 105
MsG0380016277.01.T01 AT2G27520 26.198 313 196 10 3 298 5 299 5.60e-17 81.6
MsG0380016277.01.T01 AT3G07870 23.881 402 228 19 1 343 25 407 2.83e-16 80.1
MsG0380016277.01.T01 AT3G21170 26.117 291 171 12 2 252 5 291 2.92e-15 77.0
MsG0380016277.01.T01 AT3G17530 26.033 242 151 8 1 218 3 240 6.80e-14 72.8
MsG0380016277.01.T01 AT1G47390 28.090 267 172 12 4 254 7 269 1.79e-13 71.2
MsG0380016277.01.T01 AT3G22730 27.083 288 185 9 1 267 3 286 3.73e-13 70.5
MsG0380016277.01.T01 AT3G16210 23.693 287 173 12 4 267 5 268 9.44e-13 69.3
MsG0380016277.01.T01 AT3G22700 25.091 275 181 9 1 252 2 274 1.14e-12 68.9
MsG0380016277.01.T01 AT2G04920 25.912 274 177 9 1 252 1 270 1.90e-12 68.6
MsG0380016277.01.T01 AT1G11620 25.589 297 178 14 3 267 5 290 2.85e-12 67.8
MsG0380016277.01.T01 AT3G52320 25.207 242 152 8 1 218 24 260 3.06e-12 67.8
MsG0380016277.01.T01 AT4G10190 26.891 238 149 9 3 218 8 242 3.96e-12 67.4
MsG0380016277.01.T01 AT3G17490 24.923 325 207 10 1 295 3 320 4.52e-12 67.4
MsG0380016277.01.T01 AT3G10430 27.948 229 148 8 2 215 3 229 6.56e-12 66.6
MsG0380016277.01.T01 AT2G40910 25.890 309 166 12 3 264 61 353 9.67e-12 66.6
MsG0380016277.01.T01 AT3G17480 27.059 255 135 10 1 218 9 249 1.06e-11 66.2
MsG0380016277.01.T01 AT2G40910 26.214 309 165 13 3 264 68 360 1.07e-11 66.2
MsG0380016277.01.T01 AT3G21410 25.862 290 183 14 2 267 36 317 1.25e-11 65.9
MsG0380016277.01.T01 AT1G19160 25.773 291 176 14 4 271 2 275 1.31e-11 65.5
MsG0380016277.01.T01 AT1G12870 24.262 305 183 13 2 267 31 326 3.05e-11 64.7

Find 86 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTCTCTTGTATCTATTTC+AGG 0.179554 3:+81407360 None:intergenic
ACGGCCTTGATATCGCTTTC+TGG 0.193114 3:-81407722 MsG0380016277.01.T01:CDS
AACTAATAAGTTTGATGTTT+GGG 0.233192 3:-81407280 MsG0380016277.01.T01:CDS
GATTAAATGTGTTTCGCTTT+TGG 0.248289 3:-81407340 MsG0380016277.01.T01:CDS
AGCATCTTAAACTTCTTCTT+AGG 0.290711 3:+81407093 None:intergenic
GAGTGATGATTACGGGTGTT+AGG 0.301404 3:+81407696 None:intergenic
CGAATTGCGGTGGTTAGGTT+AGG 0.301996 3:+81407813 None:intergenic
TCAGCTTCAAAACTAATTCA+TGG 0.306441 3:-81407539 MsG0380016277.01.T01:CDS
GAAATCGAGTTGGTAGAAAT+TGG 0.311149 3:+81407836 None:intergenic
GTTTGGGTGATGAAAGAATA+TGG 0.311373 3:-81407264 MsG0380016277.01.T01:CDS
TCTGTTGGAAGTAGAATTTA+AGG 0.317197 3:-81407133 MsG0380016277.01.T01:CDS
AAACTAATAAGTTTGATGTT+TGG 0.317627 3:-81407281 MsG0380016277.01.T01:CDS
AGAAGTTTAAGATGCTGATT+TGG 0.318783 3:-81407086 MsG0380016277.01.T01:CDS
ATCATATGATTGGACCATTT+AGG 0.320378 3:+81406920 None:intergenic
GAAGTTGTGGGAATCGATTA+TGG 0.340616 3:+81407914 None:intergenic
AAAGGTATCAAAGACATTAA+AGG 0.341779 3:+81407183 None:intergenic
CGAAATCCTCTCCCGCTTAC+CGG 0.349995 3:-81407982 MsG0380016277.01.T01:CDS
TACAAATTTCTCAGAATCTC+TGG 0.359808 3:-81407612 MsG0380016277.01.T01:CDS
CGGTAAGCGGGAGAGGATTT+CGG 0.391497 3:+81407983 None:intergenic
AAAATAGTTACCTATGTTCC+AGG 0.392546 3:-81407048 MsG0380016277.01.T01:CDS
TATTTCGTCACCTGAAACCA+TGG 0.403375 3:-81407490 MsG0380016277.01.T01:CDS
TAATTCATGGAAAGTACTTC+CGG 0.407793 3:-81407526 MsG0380016277.01.T01:CDS
CACTCCATCCCTCACATAAT+CGG 0.411999 3:-81407678 MsG0380016277.01.T01:CDS
TTCGAATCAACTATCCTTTG+AGG 0.429552 3:-81407794 MsG0380016277.01.T01:CDS
AGGGGTGACATCTATCTCCT+TGG 0.434127 3:-81407774 MsG0380016277.01.T01:CDS
CTATCACTGGAATAACATAA+AGG 0.438740 3:+81407165 None:intergenic
AAGGATGAGGTTGAAGTTGA+AGG 0.441671 3:+81407869 None:intergenic
TCATTGAAAGGAGGAATTCC+TGG 0.442583 3:+81407030 None:intergenic
TATGTTATTCCAGTGATAGA+AGG 0.444191 3:-81407161 MsG0380016277.01.T01:CDS
GAGGGATTGCACCGGTAAGC+GGG 0.445609 3:+81407971 None:intergenic
GTAACGAAAGGGTCGTGCTT+TGG 0.447256 3:+81407576 None:intergenic
AGGGATGGAGTGATGATTAC+GGG 0.451460 3:+81407689 None:intergenic
GAATTGCGGTGGTTAGGTTA+GGG 0.463201 3:+81407814 None:intergenic
GAAATAACGTACTGTAAATC+CGG 0.470042 3:+81407507 None:intergenic
TGATTCGAATTGCGGTGGTT+AGG 0.471462 3:+81407808 None:intergenic
AGGAGGAATTCCTGGAACAT+AGG 0.474642 3:+81407038 None:intergenic
AGTGATGATTACGGGTGTTA+GGG 0.480544 3:+81407697 None:intergenic
CTGTTGGAAGTAGAATTTAA+GGG 0.481929 3:-81407132 MsG0380016277.01.T01:CDS
CTTGTATCTATTTCAGGAAG+AGG 0.483511 3:+81407366 None:intergenic
CAGAACTTTCCTTCTATCAC+TGG 0.483850 3:+81407152 None:intergenic
TCGAATCAACTATCCTTTGA+GGG 0.492239 3:-81407793 MsG0380016277.01.T01:CDS
GAGGGATGGAGTGATGATTA+CGG 0.495477 3:+81407688 None:intergenic
AAGTTGATCGGAATCGGAGG+AGG 0.503234 3:+81407952 None:intergenic
AATATGGATTTAGAGATAGT+TGG 0.506273 3:-81407248 MsG0380016277.01.T01:CDS
AATGATGCTATGATTTATGT+TGG 0.509025 3:-81407012 MsG0380016277.01.T01:CDS
ATGTGAGGATATCATATGAT+TGG 0.509092 3:+81406910 None:intergenic
GCAAGGAAGGTGCTAGAAGA+AGG 0.514597 3:+81406986 None:intergenic
ATTGCACCGGTAAGCGGGAG+AGG 0.515069 3:+81407976 None:intergenic
GGTTCCAGAAAGCGATATCA+AGG 0.517991 3:+81407718 None:intergenic
TGATAGAAGGAAAGTTCTGT+TGG 0.525869 3:-81407148 MsG0380016277.01.T01:CDS
GTGTCACTTGTGTAACGAAA+GGG 0.546093 3:+81407565 None:intergenic
CACATAATCGGTGGTGTCAG+TGG 0.547213 3:-81407666 MsG0380016277.01.T01:CDS
AGGATAGTTGATTCGAATTG+CGG 0.555790 3:+81407800 None:intergenic
ATTTCGTCACCTGAAACCAT+GGG 0.555872 3:-81407489 MsG0380016277.01.T01:CDS
TATCTCCTTGGTTCATGCAA+CGG 0.556612 3:-81407762 MsG0380016277.01.T01:CDS
GGAGGGATTGCACCGGTAAG+CGG 0.565081 3:+81407970 None:intergenic
CTTGTGTTATGTTAAACGCA+AGG 0.568358 3:+81407406 None:intergenic
AGTGAAGGTTAGTGAAGTTG+TGG 0.573595 3:+81407901 None:intergenic
CAAGGCCGTTAGAGATGCAT+AGG 0.574361 3:+81407736 None:intergenic
AGAAATTGGAGTGGTGGAGA+AGG 0.582510 3:+81407850 None:intergenic
GGCCGTTAGAGATGCATAGG+AGG 0.585610 3:+81407739 None:intergenic
TAAATCATAGCATCATTGAA+AGG 0.587249 3:+81407018 None:intergenic
AGATAGATGTCACCCCTCAA+AGG 0.590584 3:+81407780 None:intergenic
GTTGGTAGAAATTGGAGTGG+TGG 0.596367 3:+81407844 None:intergenic
TTAGGTTAGGGAAATCGAGT+TGG 0.599385 3:+81407826 None:intergenic
AGTGTCACTTGTGTAACGAA+AGG 0.601549 3:+81407564 None:intergenic
TTGAAGTTGATCGGAATCGG+AGG 0.611579 3:+81407949 None:intergenic
GTGAAGGTTAGTGAAGTTGT+GGG 0.611975 3:+81407902 None:intergenic
CGAATCAACTATCCTTTGAG+GGG 0.613639 3:-81407792 MsG0380016277.01.T01:CDS
TGGAGTGGTGGAGAAGGATG+AGG 0.615741 3:+81407856 None:intergenic
AGTTGATCGGAATCGGAGGA+GGG 0.616474 3:+81407953 None:intergenic
ACCACCGATTATGTGAGGGA+TGG 0.632773 3:+81407674 None:intergenic
ATTTCGGTGAATAAATCTGA+CGG 0.633230 3:+81407999 None:intergenic
ATCATAGCATCATTGAAAGG+AGG 0.638234 3:+81407021 None:intergenic
ATAGTTGATTCGAATTGCGG+TGG 0.645324 3:+81407803 None:intergenic
TCCATCCCTCACATAATCGG+TGG 0.663170 3:-81407675 MsG0380016277.01.T01:CDS
TTTCGTCACCTGAAACCATG+GGG 0.665249 3:-81407488 MsG0380016277.01.T01:CDS
CTGACACCACCGATTATGTG+AGG 0.667554 3:+81407669 None:intergenic
TGACACCACCGATTATGTGA+GGG 0.668003 3:+81407670 None:intergenic
CGAGTTGGTAGAAATTGGAG+TGG 0.671959 3:+81407841 None:intergenic
GGCCTCCTATGCATCTCTAA+CGG 0.672081 3:-81407741 MsG0380016277.01.T01:CDS
AACACAAGAGATATTCAATG+AGG 0.684796 3:-81407391 MsG0380016277.01.T01:CDS
GGAGGCCGTTGCATGAACCA+AGG 0.689413 3:+81407757 None:intergenic
AATCGGAGGAGGGATTGCAC+CGG 0.690273 3:+81407963 None:intergenic
CTATTGATAAAAGCAAGAGA+AGG 0.693934 3:-81406963 MsG0380016277.01.T01:CDS
TTCGTCACCTGAAACCATGG+GGG 0.706521 3:-81407487 MsG0380016277.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAATAAGTTTGATGTT+TGG - Chr3:81407651-81407670 MsG0380016277.01.T01:CDS 20.0%
!! AACTAATAAGTTTGATGTTT+GGG - Chr3:81407652-81407671 MsG0380016277.01.T01:CDS 20.0%
!!! GTAAATTGTTTACTTTTGTA+GGG - Chr3:81407708-81407727 MsG0380016277.01.T01:CDS 20.0%
!!! TGTAAATTGTTTACTTTTGT+AGG - Chr3:81407707-81407726 MsG0380016277.01.T01:CDS 20.0%
! AATATGGATTTAGAGATAGT+TGG - Chr3:81407684-81407703 MsG0380016277.01.T01:CDS 25.0%
! AATGATGCTATGATTTATGT+TGG - Chr3:81407920-81407939 MsG0380016277.01.T01:CDS 25.0%
! TAAATCATAGCATCATTGAA+AGG + Chr3:81407917-81407936 None:intergenic 25.0%
!!! AAAGGTATCAAAGACATTAA+AGG + Chr3:81407752-81407771 None:intergenic 25.0%
!!! ATTAAATGTGTTTCGCTTTT+GGG - Chr3:81407593-81407612 MsG0380016277.01.T01:CDS 25.0%
!!! CTTGTTATAGTTTTCCTAAA+TGG - Chr3:81407998-81408017 MsG0380016277.01.T01:CDS 25.0%
!!! TAAGTGATTTTGAAGTTGAT+CGG + Chr3:81406995-81407014 None:intergenic 25.0%
AAAATAGTTACCTATGTTCC+AGG - Chr3:81407884-81407903 MsG0380016277.01.T01:CDS 30.0%
AACACAAGAGATATTCAATG+AGG - Chr3:81407541-81407560 MsG0380016277.01.T01:CDS 30.0%
AGCATCTTAAACTTCTTCTT+AGG + Chr3:81407842-81407861 None:intergenic 30.0%
ATCTCTCTTGTATCTATTTC+AGG + Chr3:81407575-81407594 None:intergenic 30.0%
ATTTCGGTGAATAAATCTGA+CGG + Chr3:81406936-81406955 None:intergenic 30.0%
CTATCACTGGAATAACATAA+AGG + Chr3:81407770-81407789 None:intergenic 30.0%
CTATTGATAAAAGCAAGAGA+AGG - Chr3:81407969-81407988 MsG0380016277.01.T01:CDS 30.0%
CTGTTGGAAGTAGAATTTAA+GGG - Chr3:81407800-81407819 MsG0380016277.01.T01:CDS 30.0%
GAAATAACGTACTGTAAATC+CGG + Chr3:81407428-81407447 None:intergenic 30.0%
TACAAATTTCTCAGAATCTC+TGG - Chr3:81407320-81407339 MsG0380016277.01.T01:CDS 30.0%
TATGTTATTCCAGTGATAGA+AGG - Chr3:81407771-81407790 MsG0380016277.01.T01:CDS 30.0%
TCAGCTTCAAAACTAATTCA+TGG - Chr3:81407393-81407412 MsG0380016277.01.T01:CDS 30.0%
TCTGTTGGAAGTAGAATTTA+AGG - Chr3:81407799-81407818 MsG0380016277.01.T01:CDS 30.0%
! AGAAGTTTAAGATGCTGATT+TGG - Chr3:81407846-81407865 MsG0380016277.01.T01:CDS 30.0%
! GATTAAATGTGTTTCGCTTT+TGG - Chr3:81407592-81407611 MsG0380016277.01.T01:CDS 30.0%
! TGCTGAGAATTCTTTTCATT+GGG - Chr3:81407472-81407491 MsG0380016277.01.T01:CDS 30.0%
!! CTTCTCTTGCTTTTATCAAT+AGG + Chr3:81407971-81407990 None:intergenic 30.0%
!! TAATTCATGGAAAGTACTTC+CGG - Chr3:81407406-81407425 MsG0380016277.01.T01:CDS 30.0%
!!! ATTTTGAAGTTGATCGGAAT+CGG + Chr3:81406989-81407008 None:intergenic 30.0%
ATCATAGCATCATTGAAAGG+AGG + Chr3:81407914-81407933 None:intergenic 35.0%
CTTGTATCTATTTCAGGAAG+AGG + Chr3:81407569-81407588 None:intergenic 35.0%
CTTGTGTTATGTTAAACGCA+AGG + Chr3:81407529-81407548 None:intergenic 35.0%
GTTTGGGTGATGAAAGAATA+TGG - Chr3:81407668-81407687 MsG0380016277.01.T01:CDS 35.0%
TCGAATCAACTATCCTTTGA+GGG - Chr3:81407139-81407158 MsG0380016277.01.T01:CDS 35.0%
TGATAGAAGGAAAGTTCTGT+TGG - Chr3:81407784-81407803 MsG0380016277.01.T01:CDS 35.0%
TTCGAATCAACTATCCTTTG+AGG - Chr3:81407138-81407157 MsG0380016277.01.T01:CDS 35.0%
! CTTTTATCAATAGGCAAGGA+AGG + Chr3:81407962-81407981 None:intergenic 35.0%
! GTGCTGAGAATTCTTTTCAT+TGG - Chr3:81407471-81407490 MsG0380016277.01.T01:CDS 35.0%
!! AGGATAGTTGATTCGAATTG+CGG + Chr3:81407135-81407154 None:intergenic 35.0%
!! CTTGCTTTTATCAATAGGCA+AGG + Chr3:81407966-81407985 None:intergenic 35.0%
!! GAAATCGAGTTGGTAGAAAT+TGG + Chr3:81407099-81407118 None:intergenic 35.0%
!! TGTTTACTTTTGTAGGGCAA+TGG - Chr3:81407714-81407733 MsG0380016277.01.T01:CDS 35.0%
!!! TGAAGGAGTTTTTGAAGTGA+AGG + Chr3:81407049-81407068 None:intergenic 35.0%
AAGGATGAGGTTGAAGTTGA+AGG + Chr3:81407066-81407085 None:intergenic 40.0%
AGTGAAGGTTAGTGAAGTTG+TGG + Chr3:81407034-81407053 None:intergenic 40.0%
AGTGATGATTACGGGTGTTA+GGG + Chr3:81407238-81407257 None:intergenic 40.0%
ATTTCGTCACCTGAAACCAT+GGG - Chr3:81407443-81407462 MsG0380016277.01.T01:CDS 40.0%
CAGAACTTTCCTTCTATCAC+TGG + Chr3:81407783-81407802 None:intergenic 40.0%
CGAATCAACTATCCTTTGAG+GGG - Chr3:81407140-81407159 MsG0380016277.01.T01:CDS 40.0%
GAAGTTGTGGGAATCGATTA+TGG + Chr3:81407021-81407040 None:intergenic 40.0%
GTGAAGGTTAGTGAAGTTGT+GGG + Chr3:81407033-81407052 None:intergenic 40.0%
TATCTCCTTGGTTCATGCAA+CGG - Chr3:81407170-81407189 MsG0380016277.01.T01:CDS 40.0%
TATTTCGTCACCTGAAACCA+TGG - Chr3:81407442-81407461 MsG0380016277.01.T01:CDS 40.0%
TCATTGAAAGGAGGAATTCC+TGG + Chr3:81407905-81407924 None:intergenic 40.0%
TTAGGTTAGGGAAATCGAGT+TGG + Chr3:81407109-81407128 None:intergenic 40.0%
!! AGTGTCACTTGTGTAACGAA+AGG + Chr3:81407371-81407390 None:intergenic 40.0%
!! ATAGTTGATTCGAATTGCGG+TGG + Chr3:81407132-81407151 None:intergenic 40.0%
!! GTGTCACTTGTGTAACGAAA+GGG + Chr3:81407370-81407389 None:intergenic 40.0%
!! TTACTTTTGTAGGGCAATGG+TGG - Chr3:81407717-81407736 MsG0380016277.01.T01:CDS 40.0%
AGATAGATGTCACCCCTCAA+AGG + Chr3:81407155-81407174 None:intergenic 45.0%
AGGAGGAATTCCTGGAACAT+AGG + Chr3:81407897-81407916 None:intergenic 45.0%
AGGGATGGAGTGATGATTAC+GGG + Chr3:81407246-81407265 None:intergenic 45.0%
CACTCCATCCCTCACATAAT+CGG - Chr3:81407254-81407273 MsG0380016277.01.T01:CDS 45.0%
GAATTGCGGTGGTTAGGTTA+GGG + Chr3:81407121-81407140 None:intergenic 45.0%
GAGGGATGGAGTGATGATTA+CGG + Chr3:81407247-81407266 None:intergenic 45.0%
GAGTGATGATTACGGGTGTT+AGG + Chr3:81407239-81407258 None:intergenic 45.0%
GGTTCCAGAAAGCGATATCA+AGG + Chr3:81407217-81407236 None:intergenic 45.0%
TGATTCGAATTGCGGTGGTT+AGG + Chr3:81407127-81407146 None:intergenic 45.0%
TTTCGTCACCTGAAACCATG+GGG - Chr3:81407444-81407463 MsG0380016277.01.T01:CDS 45.0%
! AGAAATTGGAGTGGTGGAGA+AGG + Chr3:81407085-81407104 None:intergenic 45.0%
! GTTGGTAGAAATTGGAGTGG+TGG + Chr3:81407091-81407110 None:intergenic 45.0%
! TGACACCACCGATTATGTGA+GGG + Chr3:81407265-81407284 None:intergenic 45.0%
! TTGAAGTTGATCGGAATCGG+AGG + Chr3:81406986-81407005 None:intergenic 45.0%
!! CGAGTTGGTAGAAATTGGAG+TGG + Chr3:81407094-81407113 None:intergenic 45.0%
ACGGCCTTGATATCGCTTTC+TGG - Chr3:81407210-81407229 MsG0380016277.01.T01:CDS 50.0%
AGGGGTGACATCTATCTCCT+TGG - Chr3:81407158-81407177 MsG0380016277.01.T01:CDS 50.0%
AGTTGATCGGAATCGGAGGA+GGG + Chr3:81406982-81407001 None:intergenic 50.0%
ATTCTCAGCACAAACCCCCA+TGG + Chr3:81407462-81407481 None:intergenic 50.0%
CAAGGCCGTTAGAGATGCAT+AGG + Chr3:81407199-81407218 None:intergenic 50.0%
CGAATTGCGGTGGTTAGGTT+AGG + Chr3:81407122-81407141 None:intergenic 50.0%
GGCCTCCTATGCATCTCTAA+CGG - Chr3:81407191-81407210 MsG0380016277.01.T01:CDS 50.0%
GTAACGAAAGGGTCGTGCTT+TGG + Chr3:81407359-81407378 None:intergenic 50.0%
TCCATCCCTCACATAATCGG+TGG - Chr3:81407257-81407276 MsG0380016277.01.T01:CDS 50.0%
TTCGTCACCTGAAACCATGG+GGG - Chr3:81407445-81407464 MsG0380016277.01.T01:CDS 50.0%
! AAGTTGATCGGAATCGGAGG+AGG + Chr3:81406983-81407002 None:intergenic 50.0%
! ACCACCGATTATGTGAGGGA+TGG + Chr3:81407261-81407280 None:intergenic 50.0%
! CACATAATCGGTGGTGTCAG+TGG - Chr3:81407266-81407285 MsG0380016277.01.T01:CDS 50.0%
! CTGACACCACCGATTATGTG+AGG + Chr3:81407266-81407285 None:intergenic 50.0%
!! GCAAGGAAGGTGCTAGAAGA+AGG + Chr3:81407949-81407968 None:intergenic 50.0%
AATCGGAGGAGGGATTGCAC+CGG + Chr3:81406972-81406991 None:intergenic 55.0%
CGAAATCCTCTCCCGCTTAC+CGG - Chr3:81406950-81406969 MsG0380016277.01.T01:CDS 55.0%
CGGTAAGCGGGAGAGGATTT+CGG + Chr3:81406952-81406971 None:intergenic 55.0%
GCACAAACCCCCATGGTTTC+AGG + Chr3:81407455-81407474 None:intergenic 55.0%
GGCCGTTAGAGATGCATAGG+AGG + Chr3:81407196-81407215 None:intergenic 55.0%
! TGGAGTGGTGGAGAAGGATG+AGG + Chr3:81407079-81407098 None:intergenic 55.0%
GGAGGCCGTTGCATGAACCA+AGG + Chr3:81407178-81407197 None:intergenic 60.0%
! ATTGCACCGGTAAGCGGGAG+AGG + Chr3:81406959-81406978 None:intergenic 60.0%
! GAGGGATTGCACCGGTAAGC+GGG + Chr3:81406964-81406983 None:intergenic 60.0%
! GGAGGGATTGCACCGGTAAG+CGG + Chr3:81406965-81406984 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 81406921 81408033 81406921 ID=MsG0380016277.01;Name=MsG0380016277.01
Chr3 mRNA 81406921 81408033 81406921 ID=MsG0380016277.01.T01;Parent=MsG0380016277.01;Name=MsG0380016277.01.T01;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|370
Chr3 exon 81406921 81408033 81406921 ID=MsG0380016277.01.T01:exon:10776;Parent=MsG0380016277.01.T01
Chr3 CDS 81406921 81408033 81406921 ID=MsG0380016277.01.T01:cds;Parent=MsG0380016277.01.T01
Gene Sequence

>MsG0380016277.01.T01

ATGTCTGATATTCCGTCAGATTTATTCACCGAAATCCTCTCCCGCTTACCGGTGCAATCCCTCCTCCGATTCCGATCAACTTCAAAATCACTTAAATCCATAATCGATTCCCACAACTTCACTAACCTTCACTTCAAAAACTCCTTCAACTTCAACCTCATCCTTCTCCACCACTCCAATTTCTACCAACTCGATTTCCCTAACCTAACCACCGCAATTCGAATCAACTATCCTTTGAGGGGTGACATCTATCTCCTTGGTTCATGCAACGGCCTCCTATGCATCTCTAACGGCCTTGATATCGCTTTCTGGAACCCTAACACCCGTAATCATCACTCCATCCCTCACATAATCGGTGGTGTCAGTGGCAGCTTTGCTTTCTATCAATTCGCTGACGATTACAAATTTCTCAGAATCTCTGGTTGTTTAATTGATCCAAAGCACGACCCTTTCGTTACACAAGTGACACTCTTCAGCTTCAAAACTAATTCATGGAAAGTACTTCCGGATTTACAGTACGTTATTTCGTCACCTGAAACCATGGGGGTTTGTGCTGAGAATTCTTTTCATTGGGTAGTGACTGCGAATCTTGATACGTGTTTAATCCTTGCGTTTAACATAACACAAGAGATATTCAATGAGGTTCCTCTTCCTGAAATAGATACAAGAGAGATTAAATGTGTTTCGCTTTTGGGAAAGTGTCTTTGCATCACTGTGAGTTATTGTTATCAAACTAATAAGTTTGATGTTTGGGTGATGAAAGAATATGGATTTAGAGATAGTTGGTGTAAATTGTTTACTTTTGTAGGGCAATGGTGGTTCAAATCACCTTTAATGTCTTTGATACCTTTATGTTATTCCAGTGATAGAAGGAAAGTTCTGTTGGAAGTAGAATTTAAGGGTGATTTCATGAGTGATCCTAAGAAGAAGTTTAAGATGCTGATTTGGTATTATCTCGATAGTAAAATAGTTACCTATGTTCCAGGAATTCCTCCTTTCAATGATGCTATGATTTATGTTGGAAGCCTTCTTCTAGCACCTTCCTTGCCTATTGATAAAAGCAAGAGAAGGTACGTACTTGTTATAGTTTTCCTAAATGGTCCAATCATATGA
Protein sequence

>MsG0380016277.01.T01

MSDIPSDLFTEILSRLPVQSLLRFRSTSKSLKSIIDSHNFTNLHFKNSFNFNLILLHHSNFYQLDFPNLTTAIRINYPLRGDIYLLGSCNGLLCISNGLDIAFWNPNTRNHHSIPHIIGGVSGSFAFYQFADDYKFLRISGCLIDPKHDPFVTQVTLFSFKTNSWKVLPDLQYVISSPETMGVCAENSFHWVVTANLDTCLILAFNITQEIFNEVPLPEIDTREIKCVSLLGKCLCITVSYCYQTNKFDVWVMKEYGFRDSWCKLFTFVGQWWFKSPLMSLIPLCYSSDRRKVLLEVEFKGDFMSDPKKKFKMLIWYYLDSKIVTYVPGIPPFNDAMIYVGSLLLAPSLPIDKSKRRYVLVIVFLNGPII*