AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0052680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052680 MtrunA17_Chr1g0152391 71.058 501 75 8 1 467 1 465 0.0 521
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 125 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATAATGCAACTGATTCT+AGG 0.201922 1_2:-6969251 Msa0052680:CDS
AAAACAAAAGAGAGTGAAAA+AGG 0.257941 1_2:-6969768 Msa0052680:CDS
CAGCTCCGGTCACTGATTTC+CGG 0.280069 1_2:+6969292 None:intergenic
GTTTCTAAGTCTAATCATTC+TGG 0.307209 1_2:-6969099 Msa0052680:CDS
GGGCATGGTCATGGTGGCCA+TGG 0.322786 1_2:-6968520 Msa0052680:CDS
CGATTTCCCGCCGTCTTCAT+TGG 0.340075 1_2:+6969413 None:intergenic
CCGCGGAAATCTTGAGAGTT+TGG 0.344943 1_2:-6968998 Msa0052680:CDS
AAACGAGTGTAACCGTTTCT+AGG 0.349506 1_2:-6969503 Msa0052680:CDS
TTCTGTCTCCATCTCGTCGA+TGG 0.358616 1_2:+6968838 None:intergenic
CGGCGATAGAAGCGTTGATC+TGG 0.365810 1_2:-6968908 Msa0052680:CDS
GTGGAGAATCGTCGTGAAAT+CGG 0.372507 1_2:-6968976 Msa0052680:CDS
CTGAGAATGGAAAACAGAAT+TGG 0.377941 1_2:-6968639 Msa0052680:CDS
CCGCGGAAATCTTGAGGGTT+TGG 0.390845 1_2:-6969067 Msa0052680:CDS
GGCCATGGCCATCACCTTGA+TGG 0.396529 1_2:+6968563 None:intergenic
TCTTCGCGGTTTCGATCAAC+AGG 0.406790 1_2:+6969474 None:intergenic
CTCTAAGACTTGGGTGAAGA+AGG 0.431502 1_2:-6968470 Msa0052680:CDS
CAATGAAGACGGCGGGAAAT+CGG 0.435777 1_2:-6969412 Msa0052680:CDS
GGGAAATCGGTGACTGAAGC+TGG 0.438338 1_2:-6969399 Msa0052680:CDS
TCGTGAAAACAGGAGGAAAT+CGG 0.438381 1_2:-6969034 Msa0052680:CDS
TAGAGAATCGTCGTGAAAAC+AGG 0.439939 1_2:-6969044 Msa0052680:CDS
ATGAAGTTGAAGAGAAATTG+AGG 0.445674 1_2:-6968678 Msa0052680:CDS
TGAGCGACACGTGGCGGTTG+TGG 0.452538 1_2:-6969529 Msa0052680:CDS
CGGAAACCTGTGACTGGAGA+TGG 0.453628 1_2:-6969141 Msa0052680:CDS
CAGAAATCGGTGACCGGAGA+TGG 0.457915 1_2:-6968934 Msa0052680:CDS
GTAACATAGTTTGAAGGAAG+AGG 0.460002 1_2:+6969636 None:intergenic
CAAGGTGATGGCCATGGCCA+TGG 0.463368 1_2:-6968559 Msa0052680:CDS
GGCATGGTCATGGTGGCCAT+GGG 0.467257 1_2:-6968519 Msa0052680:CDS
CTTCAACAAGAAGGAAGCTT+GGG 0.468586 1_2:-6969799 Msa0052680:CDS
CGGAAATCAGTGACCGGAGC+TGG 0.468791 1_2:-6969291 Msa0052680:CDS
TTATTGCTGTTGATCAGAAT+CGG 0.470598 1_2:-6969227 Msa0052680:CDS
TCTGTCTCCATCTCGTCGAT+GGG 0.473685 1_2:+6968839 None:intergenic
TGAAGTTGAAGAGAAATTGA+GGG 0.478958 1_2:-6968677 Msa0052680:CDS
TCTTCAACAAGAAGGAAGCT+TGG 0.481298 1_2:-6969800 Msa0052680:CDS
TAACCGTCGTGGAGTGGTTG+TGG 0.484680 1_2:-6969178 Msa0052680:CDS
GGATGAAGATGAGCAGAAAT+CGG 0.491846 1_2:-6968947 Msa0052680:CDS
ACAGAGTTTGGTAATGGAGG+AGG 0.492296 1_2:-6969694 Msa0052680:CDS
ACCGTCGCGGATTCCAGCTC+CGG 0.493214 1_2:+6969278 None:intergenic
GAGAGAAGAGCAATTGAAGA+AGG 0.500630 1_2:-6968793 Msa0052680:CDS
CATGTCTATGCCCATGGCCA+TGG 0.500748 1_2:+6968548 None:intergenic
TCGCTCAGCTTCAAGAGCGT+TGG 0.501828 1_2:-6969611 Msa0052680:CDS
TGAAGAAGGTAGTGCTGCTA+AGG 0.508309 1_2:-6968779 Msa0052680:CDS
TCTATCGCCGATTCCATCTC+CGG 0.511120 1_2:+6968921 None:intergenic
GCGAGAGTAACATAGTTTGA+AGG 0.513620 1_2:+6969630 None:intergenic
TTATCTGTGAAATCTGAGAA+TGG 0.516630 1_2:-6968652 Msa0052680:CDS
AATCGCCGCGGAAATCTTGA+GGG 0.520251 1_2:-6969072 Msa0052680:CDS
AACAACAAAGCTCTAAGACT+TGG 0.521013 1_2:-6968480 Msa0052680:CDS
CGGAAATCTTGAGAGTTTGG+TGG 0.521228 1_2:-6968995 Msa0052680:CDS
AAGCGTTGATCTGGATGGTA+AGG 0.522878 1_2:-6968899 Msa0052680:CDS
GCGATTCCATCTCCAGTCAC+AGG 0.527907 1_2:+6969135 None:intergenic
AACTATGGTATGAGAAAGAA+TGG 0.530677 1_2:-6968601 Msa0052680:CDS
AAGCAGAAATCGTGGTGACT+CGG 0.532193 1_2:-6969355 Msa0052680:CDS
AAAACAGAGTTTGGTAATGG+AGG 0.536312 1_2:-6969697 Msa0052680:CDS
CATGGCCATGGGCATGGTCA+TGG 0.536342 1_2:-6968529 Msa0052680:CDS
GTGAAGAAGGATGGCAGTGT+TGG 0.539056 1_2:-6968457 Msa0052680:CDS
GATGAGCAGAAATCGGTGAC+CGG 0.539906 1_2:-6968940 Msa0052680:CDS
AGAATGGAAAACAGAATTGG+AGG 0.543550 1_2:-6968636 Msa0052680:CDS
GCCACGTGTCGCTCATCCAC+TGG 0.545510 1_2:+6969537 None:intergenic
GAGAATCGGAAACCTGTGAC+TGG 0.548443 1_2:-6969147 Msa0052680:CDS
CATGGCCATGTCTATGCCCA+TGG 0.550541 1_2:+6968542 None:intergenic
CTGTCGCCAATGAAGACGGC+GGG 0.551625 1_2:-6969419 Msa0052680:CDS
ACAACAAAGCTCTAAGACTT+GGG 0.551740 1_2:-6968479 Msa0052680:CDS
TAATCGCCGCGGAAATCTTG+AGG 0.552075 1_2:-6969073 Msa0052680:CDS
ACAGGAGGAAATCGGTTGAT+CGG 0.552396 1_2:-6969026 Msa0052680:CDS
CATGGCCATGGGCATAGACA+TGG 0.552796 1_2:-6968547 Msa0052680:CDS
GTCATGGTGGCCATGGGCAT+AGG 0.553276 1_2:-6968513 Msa0052680:CDS
AGATCAACCCATCGACGAGA+TGG 0.554382 1_2:-6968846 Msa0052680:CDS
GAACAAGAAGGCTAAGGAGA+AGG 0.556489 1_2:-6968818 Msa0052680:CDS
CATTATCAGCGTTACCGTCG+CGG 0.557103 1_2:+6969265 None:intergenic
GTTGCTGTCGCCAATGAAGA+CGG 0.559012 1_2:-6969423 Msa0052680:CDS
CATGGGCATAGACATGGCCA+TGG 0.561159 1_2:-6968541 Msa0052680:CDS
TGATCGAAACCGCGAAGACT+CGG 0.562861 1_2:-6969469 Msa0052680:CDS
AAGGTGATGGCCATGGCCAT+GGG 0.564332 1_2:-6968558 Msa0052680:CDS
GGTTATCCACCGAGTCTTCG+CGG 0.564841 1_2:+6969460 None:intergenic
CCTTAAAATTCCTATGCCCA+TGG 0.564997 1_2:+6968503 None:intergenic
CGACAGCAACATGCACCGCA+CGG 0.567068 1_2:+6969436 None:intergenic
GCGTGGAAATCGCGACGACT+CGG 0.568374 1_2:-6969205 Msa0052680:CDS
CAAGAAGGCTAAGGAGAAGG+AGG 0.568971 1_2:-6968815 Msa0052680:CDS
CATAGACATGGCCATGGGCA+TGG 0.570662 1_2:-6968535 Msa0052680:CDS
GGCGATTAACCGTCGTGGAG+TGG 0.573109 1_2:-6969184 Msa0052680:CDS
GGCCACCATGACCATGCCCA+TGG 0.573442 1_2:+6968524 None:intergenic
GACAGCCGGAAATCAGTGAC+CGG 0.574839 1_2:-6969297 Msa0052680:CDS
AGAATGATTAGACTTAGAAA+CGG 0.575857 1_2:+6969101 None:intergenic
TCGGTGACCGGAGATGGAAT+CGG 0.578359 1_2:-6968928 Msa0052680:CDS
AACAGGATTAGACCTAGAAA+CGG 0.582547 1_2:+6969491 None:intergenic
CGTTGATCTGGATGGTAAGG+TGG 0.582643 1_2:-6968896 Msa0052680:CDS
TTGTGGTGTCTGAAGAGAAT+CGG 0.584951 1_2:-6969161 Msa0052680:CDS
AGAAGGTAGTGCTGCTAAGG+AGG 0.589961 1_2:-6968776 Msa0052680:CDS
GGTGGAGAACCGCCTTGCGG+TGG 0.590359 1_2:-6969334 Msa0052680:CDS
TGATCTGGATGGTAAGGTGG+AGG 0.592538 1_2:-6968893 Msa0052680:CDS
GAGACAGAACAAGAAGGCTA+AGG 0.596287 1_2:-6968824 Msa0052680:CDS
AGAAAGAATGGTGATGGCGA+TGG 0.597081 1_2:-6968589 Msa0052680:CDS
AAGACTTGGGTGAAGAAGGA+TGG 0.598612 1_2:-6968466 Msa0052680:CDS
GAACAACTTCTTCAACAAGA+AGG 0.600067 1_2:-6969808 Msa0052680:CDS
ATGGGCATAGACATGGCCAT+GGG 0.602982 1_2:-6968540 Msa0052680:CDS
CTCGGTGGAGAACCGCCTTG+CGG 0.619726 1_2:-6969337 Msa0052680:CDS
TTGTGAAGTCTGATGACAGC+CGG 0.620000 1_2:-6969311 Msa0052680:CDS
GGCCATGGGCATGGTCATGG+TGG 0.623967 1_2:-6968526 Msa0052680:CDS
GATAGAAGCGTTGATCTGGA+TGG 0.631140 1_2:-6968904 Msa0052680:CDS
CAGAAATCGTGGTGACTCGG+TGG 0.644275 1_2:-6969352 Msa0052680:CDS
GATGGCGATGGTGACCATCA+AGG 0.644326 1_2:-6968577 Msa0052680:CDS
GACCATCAAGGTGATGGCCA+TGG 0.645641 1_2:-6968565 Msa0052680:CDS
TCGAAACCGCGAAGACTCGG+TGG 0.646575 1_2:-6969466 Msa0052680:CDS
TCGTCGTGAAATCGGCAAGG+AGG 0.651246 1_2:-6968968 Msa0052680:CDS
GATGGTGACCATCAAGGTGA+TGG 0.653332 1_2:-6968571 Msa0052680:CDS
ACCGGAGCTGGAATCCGCGA+CGG 0.653935 1_2:-6969279 Msa0052680:CDS
GGTATGAGAAAGAATGGTGA+TGG 0.657596 1_2:-6968595 Msa0052680:CDS
CGTAATCGAAGCAGAAATCG+TGG 0.661205 1_2:-6969363 Msa0052680:CDS
GAATCGTCGTGAAATCGGCA+AGG 0.665479 1_2:-6968971 Msa0052680:CDS
AAAGGAGGATCATCTACCAG+TGG 0.666619 1_2:-6969553 Msa0052680:CDS
CAGACTTCACAACCACCGCA+AGG 0.672029 1_2:+6969322 None:intergenic
AGAATCGTCGTGAAAACAGG+AGG 0.672820 1_2:-6969041 Msa0052680:CDS
ACCAGTGGATGAGCGACACG+TGG 0.682735 1_2:-6969538 Msa0052680:CDS
GACTCGGCGATTAACCGTCG+TGG 0.687215 1_2:-6969189 Msa0052680:CDS
GCTGTCGCCAATGAAGACGG+CGG 0.688308 1_2:-6969420 Msa0052680:CDS
CAGCAACATGCACCGCACGG+CGG 0.691321 1_2:+6969439 None:intergenic
GCTGTTGATCAGAATCGGCG+TGG 0.701988 1_2:-6969222 Msa0052680:CDS
AGTGGATGAGCGACACGTGG+CGG 0.702313 1_2:-6969535 Msa0052680:CDS
CCAAACTCTCAAGATTTCCG+CGG 0.706080 1_2:+6968998 None:intergenic
CTCGGTGGATAACCGCCGTG+CGG 0.709258 1_2:-6969451 Msa0052680:CDS
CCAAACCCTCAAGATTTCCG+CGG 0.710817 1_2:+6969067 None:intergenic
TCGGTTGATCGGAATCGCCG+CGG 0.719041 1_2:-6969015 Msa0052680:CDS
CATTCTGGTCGTAATCGCCG+CGG 0.722423 1_2:-6969084 Msa0052680:CDS
GAGATGGAGACAGAACAAGA+AGG 0.742489 1_2:-6968830 Msa0052680:CDS
ACACCACAACCACTCCACGA+CGG 0.744561 1_2:+6969175 None:intergenic
ACTTCACAACCACCGCAAGG+CGG 0.782021 1_2:+6969325 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATCAACTAGAAAAAA+AGG - chr1_2:6968695-6968714 Msa0052680:CDS 15.0%
!! AAAAAATCAACTAGAAAAAA+AGG - chr1_2:6968695-6968714 Msa0052680:CDS 15.0%
!! AAAGGAAAAGAAAAAGAAAA+AGG - chr1_2:6968522-6968541 Msa0052680:CDS 20.0%
!! AAAGGAAAAGAAAAAGAAAA+AGG - chr1_2:6968522-6968541 Msa0052680:CDS 20.0%
! AAAACAAAAGAGAGTGAAAA+AGG - chr1_2:6968498-6968517 Msa0052680:CDS 25.0%
! AGAAGAAAAAAAACAGAGTT+TGG - chr1_2:6968560-6968579 Msa0052680:CDS 25.0%
! AAAAAAACAGAGTTTGGTAA+TGG - chr1_2:6968566-6968585 Msa0052680:CDS 25.0%
! AAATCAACTAGAAAAAAAGG+AGG - chr1_2:6968698-6968717 Msa0052680:CDS 25.0%
! AGAATGATTAGACTTAGAAA+CGG + chr1_2:6969168-6969187 None:intergenic 25.0%
! AAAACAAAAGAGAGTGAAAA+AGG - chr1_2:6968498-6968517 Msa0052680:CDS 25.0%
! AGAAGAAAAAAAACAGAGTT+TGG - chr1_2:6968560-6968579 Msa0052680:CDS 25.0%
! AAAAAAACAGAGTTTGGTAA+TGG - chr1_2:6968566-6968585 Msa0052680:CDS 25.0%
! AAATCAACTAGAAAAAAAGG+AGG - chr1_2:6968698-6968717 Msa0052680:CDS 25.0%
! AGAATGATTAGACTTAGAAA+CGG + chr1_2:6969168-6969187 None:intergenic 25.0%
AAAGAGAGTGAAAAAGGAAA+AGG - chr1_2:6968504-6968523 Msa0052680:CDS 30.0%
! TTATTGCTGTTGATCAGAAT+CGG - chr1_2:6969039-6969058 Msa0052680:CDS 30.0%
GTTTCTAAGTCTAATCATTC+TGG - chr1_2:6969167-6969186 Msa0052680:CDS 30.0%
ATGAAGTTGAAGAGAAATTG+AGG - chr1_2:6969588-6969607 Msa0052680:CDS 30.0%
TGAAGTTGAAGAGAAATTGA+GGG - chr1_2:6969589-6969608 Msa0052680:CDS 30.0%
TTATCTGTGAAATCTGAGAA+TGG - chr1_2:6969614-6969633 Msa0052680:CDS 30.0%
AGGTTCAGAAAAATGAACTA+TGG - chr1_2:6969650-6969669 Msa0052680:CDS 30.0%
AACTATGGTATGAGAAAGAA+TGG - chr1_2:6969665-6969684 Msa0052680:CDS 30.0%
AAAGAGAGTGAAAAAGGAAA+AGG - chr1_2:6968504-6968523 Msa0052680:CDS 30.0%
! TTATTGCTGTTGATCAGAAT+CGG - chr1_2:6969039-6969058 Msa0052680:CDS 30.0%
GTTTCTAAGTCTAATCATTC+TGG - chr1_2:6969167-6969186 Msa0052680:CDS 30.0%
ATGAAGTTGAAGAGAAATTG+AGG - chr1_2:6969588-6969607 Msa0052680:CDS 30.0%
TGAAGTTGAAGAGAAATTGA+GGG - chr1_2:6969589-6969608 Msa0052680:CDS 30.0%
TTATCTGTGAAATCTGAGAA+TGG - chr1_2:6969614-6969633 Msa0052680:CDS 30.0%
AGGTTCAGAAAAATGAACTA+TGG - chr1_2:6969650-6969669 Msa0052680:CDS 30.0%
AACTATGGTATGAGAAAGAA+TGG - chr1_2:6969665-6969684 Msa0052680:CDS 30.0%
GAACAACTTCTTCAACAAGA+AGG - chr1_2:6968458-6968477 Msa0052680:CDS 35.0%
!! AAAACAGAGTTTGGTAATGG+AGG - chr1_2:6968569-6968588 Msa0052680:CDS 35.0%
GTAACATAGTTTGAAGGAAG+AGG + chr1_2:6968633-6968652 None:intergenic 35.0%
AACAGGATTAGACCTAGAAA+CGG + chr1_2:6968778-6968797 None:intergenic 35.0%
! CTGATAATGCAACTGATTCT+AGG - chr1_2:6969015-6969034 Msa0052680:CDS 35.0%
CTGAGAATGGAAAACAGAAT+TGG - chr1_2:6969627-6969646 Msa0052680:CDS 35.0%
AGAATGGAAAACAGAATTGG+AGG - chr1_2:6969630-6969649 Msa0052680:CDS 35.0%
!! AACAACAAAGCTCTAAGACT+TGG - chr1_2:6969786-6969805 Msa0052680:CDS 35.0%
!! ACAACAAAGCTCTAAGACTT+GGG - chr1_2:6969787-6969806 Msa0052680:CDS 35.0%
GAACAACTTCTTCAACAAGA+AGG - chr1_2:6968458-6968477 Msa0052680:CDS 35.0%
!! AAAACAGAGTTTGGTAATGG+AGG - chr1_2:6968569-6968588 Msa0052680:CDS 35.0%
GTAACATAGTTTGAAGGAAG+AGG + chr1_2:6968633-6968652 None:intergenic 35.0%
AACAGGATTAGACCTAGAAA+CGG + chr1_2:6968778-6968797 None:intergenic 35.0%
! CTGATAATGCAACTGATTCT+AGG - chr1_2:6969015-6969034 Msa0052680:CDS 35.0%
CTGAGAATGGAAAACAGAAT+TGG - chr1_2:6969627-6969646 Msa0052680:CDS 35.0%
AGAATGGAAAACAGAATTGG+AGG - chr1_2:6969630-6969649 Msa0052680:CDS 35.0%
!! AACAACAAAGCTCTAAGACT+TGG - chr1_2:6969786-6969805 Msa0052680:CDS 35.0%
!! ACAACAAAGCTCTAAGACTT+GGG - chr1_2:6969787-6969806 Msa0052680:CDS 35.0%
TCTTCAACAAGAAGGAAGCT+TGG - chr1_2:6968466-6968485 Msa0052680:CDS 40.0%
CTTCAACAAGAAGGAAGCTT+GGG - chr1_2:6968467-6968486 Msa0052680:CDS 40.0%
GCGAGAGTAACATAGTTTGA+AGG + chr1_2:6968639-6968658 None:intergenic 40.0%
AAACGAGTGTAACCGTTTCT+AGG - chr1_2:6968763-6968782 Msa0052680:CDS 40.0%
TTGTGGTGTCTGAAGAGAAT+CGG - chr1_2:6969105-6969124 Msa0052680:CDS 40.0%
TAGAGAATCGTCGTGAAAAC+AGG - chr1_2:6969222-6969241 Msa0052680:CDS 40.0%
TCGTGAAAACAGGAGGAAAT+CGG - chr1_2:6969232-6969251 Msa0052680:CDS 40.0%
GGATGAAGATGAGCAGAAAT+CGG - chr1_2:6969319-6969338 Msa0052680:CDS 40.0%
GAGAGAAGAGCAATTGAAGA+AGG - chr1_2:6969473-6969492 Msa0052680:CDS 40.0%
GGTATGAGAAAGAATGGTGA+TGG - chr1_2:6969671-6969690 Msa0052680:CDS 40.0%
CCTTAAAATTCCTATGCCCA+TGG + chr1_2:6969766-6969785 None:intergenic 40.0%
! CCATGGGCATAGGAATTTTA+AGG - chr1_2:6969763-6969782 Msa0052680:CDS 40.0%
TCTTCAACAAGAAGGAAGCT+TGG - chr1_2:6968466-6968485 Msa0052680:CDS 40.0%
CTTCAACAAGAAGGAAGCTT+GGG - chr1_2:6968467-6968486 Msa0052680:CDS 40.0%
GCGAGAGTAACATAGTTTGA+AGG + chr1_2:6968639-6968658 None:intergenic 40.0%
AAACGAGTGTAACCGTTTCT+AGG - chr1_2:6968763-6968782 Msa0052680:CDS 40.0%
TTGTGGTGTCTGAAGAGAAT+CGG - chr1_2:6969105-6969124 Msa0052680:CDS 40.0%
TAGAGAATCGTCGTGAAAAC+AGG - chr1_2:6969222-6969241 Msa0052680:CDS 40.0%
TCGTGAAAACAGGAGGAAAT+CGG - chr1_2:6969232-6969251 Msa0052680:CDS 40.0%
GGATGAAGATGAGCAGAAAT+CGG - chr1_2:6969319-6969338 Msa0052680:CDS 40.0%
GAGAGAAGAGCAATTGAAGA+AGG - chr1_2:6969473-6969492 Msa0052680:CDS 40.0%
GGTATGAGAAAGAATGGTGA+TGG - chr1_2:6969671-6969690 Msa0052680:CDS 40.0%
CCTTAAAATTCCTATGCCCA+TGG + chr1_2:6969766-6969785 None:intergenic 40.0%
! CCATGGGCATAGGAATTTTA+AGG - chr1_2:6969763-6969782 Msa0052680:CDS 40.0%
!! ACAGAGTTTGGTAATGGAGG+AGG - chr1_2:6968572-6968591 Msa0052680:CDS 45.0%
AAAGGAGGATCATCTACCAG+TGG - chr1_2:6968713-6968732 Msa0052680:CDS 45.0%
CGTAATCGAAGCAGAAATCG+TGG - chr1_2:6968903-6968922 Msa0052680:CDS 45.0%
AAGCAGAAATCGTGGTGACT+CGG - chr1_2:6968911-6968930 Msa0052680:CDS 45.0%
TTGTGAAGTCTGATGACAGC+CGG - chr1_2:6968955-6968974 Msa0052680:CDS 45.0%
AGAATCGTCGTGAAAACAGG+AGG - chr1_2:6969225-6969244 Msa0052680:CDS 45.0%
ACAGGAGGAAATCGGTTGAT+CGG - chr1_2:6969240-6969259 Msa0052680:CDS 45.0%
CCAAACTCTCAAGATTTCCG+CGG + chr1_2:6969271-6969290 None:intergenic 45.0%
CGGAAATCTTGAGAGTTTGG+TGG - chr1_2:6969271-6969290 Msa0052680:CDS 45.0%
GTGGAGAATCGTCGTGAAAT+CGG - chr1_2:6969290-6969309 Msa0052680:CDS 45.0%
!! GATAGAAGCGTTGATCTGGA+TGG - chr1_2:6969362-6969381 Msa0052680:CDS 45.0%
!! AAGCGTTGATCTGGATGGTA+AGG - chr1_2:6969367-6969386 Msa0052680:CDS 45.0%
GAGATGGAGACAGAACAAGA+AGG - chr1_2:6969436-6969455 Msa0052680:CDS 45.0%
GAGACAGAACAAGAAGGCTA+AGG - chr1_2:6969442-6969461 Msa0052680:CDS 45.0%
GAACAAGAAGGCTAAGGAGA+AGG - chr1_2:6969448-6969467 Msa0052680:CDS 45.0%
! TGAAGAAGGTAGTGCTGCTA+AGG - chr1_2:6969487-6969506 Msa0052680:CDS 45.0%
!! AGAAAGAATGGTGATGGCGA+TGG - chr1_2:6969677-6969696 Msa0052680:CDS 45.0%
!! CTCTAAGACTTGGGTGAAGA+AGG - chr1_2:6969796-6969815 Msa0052680:CDS 45.0%
AAGACTTGGGTGAAGAAGGA+TGG - chr1_2:6969800-6969819 Msa0052680:CDS 45.0%
!! ACAGAGTTTGGTAATGGAGG+AGG - chr1_2:6968572-6968591 Msa0052680:CDS 45.0%
AAAGGAGGATCATCTACCAG+TGG - chr1_2:6968713-6968732 Msa0052680:CDS 45.0%
CGTAATCGAAGCAGAAATCG+TGG - chr1_2:6968903-6968922 Msa0052680:CDS 45.0%
AAGCAGAAATCGTGGTGACT+CGG - chr1_2:6968911-6968930 Msa0052680:CDS 45.0%
TTGTGAAGTCTGATGACAGC+CGG - chr1_2:6968955-6968974 Msa0052680:CDS 45.0%
AGAATCGTCGTGAAAACAGG+AGG - chr1_2:6969225-6969244 Msa0052680:CDS 45.0%
ACAGGAGGAAATCGGTTGAT+CGG - chr1_2:6969240-6969259 Msa0052680:CDS 45.0%
CCAAACTCTCAAGATTTCCG+CGG + chr1_2:6969271-6969290 None:intergenic 45.0%
CGGAAATCTTGAGAGTTTGG+TGG - chr1_2:6969271-6969290 Msa0052680:CDS 45.0%
GTGGAGAATCGTCGTGAAAT+CGG - chr1_2:6969290-6969309 Msa0052680:CDS 45.0%
!! GATAGAAGCGTTGATCTGGA+TGG - chr1_2:6969362-6969381 Msa0052680:CDS 45.0%
!! AAGCGTTGATCTGGATGGTA+AGG - chr1_2:6969367-6969386 Msa0052680:CDS 45.0%
GAGATGGAGACAGAACAAGA+AGG - chr1_2:6969436-6969455 Msa0052680:CDS 45.0%
GAGACAGAACAAGAAGGCTA+AGG - chr1_2:6969442-6969461 Msa0052680:CDS 45.0%
GAACAAGAAGGCTAAGGAGA+AGG - chr1_2:6969448-6969467 Msa0052680:CDS 45.0%
! TGAAGAAGGTAGTGCTGCTA+AGG - chr1_2:6969487-6969506 Msa0052680:CDS 45.0%
!! AGAAAGAATGGTGATGGCGA+TGG - chr1_2:6969677-6969696 Msa0052680:CDS 45.0%
!! CTCTAAGACTTGGGTGAAGA+AGG - chr1_2:6969796-6969815 Msa0052680:CDS 45.0%
AAGACTTGGGTGAAGAAGGA+TGG - chr1_2:6969800-6969819 Msa0052680:CDS 45.0%
TCTTCGCGGTTTCGATCAAC+AGG + chr1_2:6968795-6968814 None:intergenic 50.0%
TGATCGAAACCGCGAAGACT+CGG - chr1_2:6968797-6968816 Msa0052680:CDS 50.0%
GTTGCTGTCGCCAATGAAGA+CGG - chr1_2:6968843-6968862 Msa0052680:CDS 50.0%
CAATGAAGACGGCGGGAAAT+CGG - chr1_2:6968854-6968873 Msa0052680:CDS 50.0%
CATTATCAGCGTTACCGTCG+CGG + chr1_2:6969004-6969023 None:intergenic 50.0%
GAGAATCGGAAACCTGTGAC+TGG - chr1_2:6969119-6969138 Msa0052680:CDS 50.0%
TAATCGCCGCGGAAATCTTG+AGG - chr1_2:6969193-6969212 Msa0052680:CDS 50.0%
AATCGCCGCGGAAATCTTGA+GGG - chr1_2:6969194-6969213 Msa0052680:CDS 50.0%
CCAAACCCTCAAGATTTCCG+CGG + chr1_2:6969202-6969221 None:intergenic 50.0%
CCGCGGAAATCTTGAGAGTT+TGG - chr1_2:6969268-6969287 Msa0052680:CDS 50.0%
GAATCGTCGTGAAATCGGCA+AGG - chr1_2:6969295-6969314 Msa0052680:CDS 50.0%
GATGAGCAGAAATCGGTGAC+CGG - chr1_2:6969326-6969345 Msa0052680:CDS 50.0%
!! TCTATCGCCGATTCCATCTC+CGG + chr1_2:6969348-6969367 None:intergenic 50.0%
CGTTGATCTGGATGGTAAGG+TGG - chr1_2:6969370-6969389 Msa0052680:CDS 50.0%
TGATCTGGATGGTAAGGTGG+AGG - chr1_2:6969373-6969392 Msa0052680:CDS 50.0%
AGATCAACCCATCGACGAGA+TGG - chr1_2:6969420-6969439 Msa0052680:CDS 50.0%
TCTGTCTCCATCTCGTCGAT+GGG + chr1_2:6969430-6969449 None:intergenic 50.0%
TTCTGTCTCCATCTCGTCGA+TGG + chr1_2:6969431-6969450 None:intergenic 50.0%
CAAGAAGGCTAAGGAGAAGG+AGG - chr1_2:6969451-6969470 Msa0052680:CDS 50.0%
! AGAAGGTAGTGCTGCTAAGG+AGG - chr1_2:6969490-6969509 Msa0052680:CDS 50.0%
GATGGTGACCATCAAGGTGA+TGG - chr1_2:6969695-6969714 Msa0052680:CDS 50.0%
ATGGGCATAGACATGGCCAT+GGG - chr1_2:6969726-6969745 Msa0052680:CDS 50.0%
GTGAAGAAGGATGGCAGTGT+TGG - chr1_2:6969809-6969828 Msa0052680:CDS 50.0%
TCTTCGCGGTTTCGATCAAC+AGG + chr1_2:6968795-6968814 None:intergenic 50.0%
TGATCGAAACCGCGAAGACT+CGG - chr1_2:6968797-6968816 Msa0052680:CDS 50.0%
GTTGCTGTCGCCAATGAAGA+CGG - chr1_2:6968843-6968862 Msa0052680:CDS 50.0%
CAATGAAGACGGCGGGAAAT+CGG - chr1_2:6968854-6968873 Msa0052680:CDS 50.0%
CATTATCAGCGTTACCGTCG+CGG + chr1_2:6969004-6969023 None:intergenic 50.0%
GAGAATCGGAAACCTGTGAC+TGG - chr1_2:6969119-6969138 Msa0052680:CDS 50.0%
TAATCGCCGCGGAAATCTTG+AGG - chr1_2:6969193-6969212 Msa0052680:CDS 50.0%
AATCGCCGCGGAAATCTTGA+GGG - chr1_2:6969194-6969213 Msa0052680:CDS 50.0%
CCAAACCCTCAAGATTTCCG+CGG + chr1_2:6969202-6969221 None:intergenic 50.0%
CCGCGGAAATCTTGAGAGTT+TGG - chr1_2:6969268-6969287 Msa0052680:CDS 50.0%
GAATCGTCGTGAAATCGGCA+AGG - chr1_2:6969295-6969314 Msa0052680:CDS 50.0%
GATGAGCAGAAATCGGTGAC+CGG - chr1_2:6969326-6969345 Msa0052680:CDS 50.0%
!! TCTATCGCCGATTCCATCTC+CGG + chr1_2:6969348-6969367 None:intergenic 50.0%
CGTTGATCTGGATGGTAAGG+TGG - chr1_2:6969370-6969389 Msa0052680:CDS 50.0%
TGATCTGGATGGTAAGGTGG+AGG - chr1_2:6969373-6969392 Msa0052680:CDS 50.0%
AGATCAACCCATCGACGAGA+TGG - chr1_2:6969420-6969439 Msa0052680:CDS 50.0%
TCTGTCTCCATCTCGTCGAT+GGG + chr1_2:6969430-6969449 None:intergenic 50.0%
TTCTGTCTCCATCTCGTCGA+TGG + chr1_2:6969431-6969450 None:intergenic 50.0%
CAAGAAGGCTAAGGAGAAGG+AGG - chr1_2:6969451-6969470 Msa0052680:CDS 50.0%
! AGAAGGTAGTGCTGCTAAGG+AGG - chr1_2:6969490-6969509 Msa0052680:CDS 50.0%
GATGGTGACCATCAAGGTGA+TGG - chr1_2:6969695-6969714 Msa0052680:CDS 50.0%
ATGGGCATAGACATGGCCAT+GGG - chr1_2:6969726-6969745 Msa0052680:CDS 50.0%
GTGAAGAAGGATGGCAGTGT+TGG - chr1_2:6969809-6969828 Msa0052680:CDS 50.0%
! TCGCTCAGCTTCAAGAGCGT+TGG - chr1_2:6968655-6968674 Msa0052680:CDS 55.0%
GGTTATCCACCGAGTCTTCG+CGG + chr1_2:6968809-6968828 None:intergenic 55.0%
CGATTTCCCGCCGTCTTCAT+TGG + chr1_2:6968856-6968875 None:intergenic 55.0%
GGGAAATCGGTGACTGAAGC+TGG - chr1_2:6968867-6968886 Msa0052680:CDS 55.0%
! CAGAAATCGTGGTGACTCGG+TGG - chr1_2:6968914-6968933 Msa0052680:CDS 55.0%
ACTTCACAACCACCGCAAGG+CGG + chr1_2:6968944-6968963 None:intergenic 55.0%
CAGACTTCACAACCACCGCA+AGG + chr1_2:6968947-6968966 None:intergenic 55.0%
GACAGCCGGAAATCAGTGAC+CGG - chr1_2:6968969-6968988 Msa0052680:CDS 55.0%
!! CAGCTCCGGTCACTGATTTC+CGG + chr1_2:6968977-6968996 None:intergenic 55.0%
GCTGTTGATCAGAATCGGCG+TGG - chr1_2:6969044-6969063 Msa0052680:CDS 55.0%
TAACCGTCGTGGAGTGGTTG+TGG - chr1_2:6969088-6969107 Msa0052680:CDS 55.0%
ACACCACAACCACTCCACGA+CGG + chr1_2:6969094-6969113 None:intergenic 55.0%
CGGAAACCTGTGACTGGAGA+TGG - chr1_2:6969125-6969144 Msa0052680:CDS 55.0%
GCGATTCCATCTCCAGTCAC+AGG + chr1_2:6969134-6969153 None:intergenic 55.0%
CATTCTGGTCGTAATCGCCG+CGG - chr1_2:6969182-6969201 Msa0052680:CDS 55.0%
CCGCGGAAATCTTGAGGGTT+TGG - chr1_2:6969199-6969218 Msa0052680:CDS 55.0%
TCGTCGTGAAATCGGCAAGG+AGG - chr1_2:6969298-6969317 Msa0052680:CDS 55.0%
CAGAAATCGGTGACCGGAGA+TGG - chr1_2:6969332-6969351 Msa0052680:CDS 55.0%
TCGGTGACCGGAGATGGAAT+CGG - chr1_2:6969338-6969357 Msa0052680:CDS 55.0%
!! CGGCGATAGAAGCGTTGATC+TGG - chr1_2:6969358-6969377 Msa0052680:CDS 55.0%
GATGGCGATGGTGACCATCA+AGG - chr1_2:6969689-6969708 Msa0052680:CDS 55.0%
! GACCATCAAGGTGATGGCCA+TGG - chr1_2:6969701-6969720 Msa0052680:CDS 55.0%
! AAGGTGATGGCCATGGCCAT+GGG - chr1_2:6969708-6969727 Msa0052680:CDS 55.0%
CATGTCTATGCCCATGGCCA+TGG + chr1_2:6969721-6969740 None:intergenic 55.0%
CATGGCCATGGGCATAGACA+TGG - chr1_2:6969719-6969738 Msa0052680:CDS 55.0%
CATGGCCATGTCTATGCCCA+TGG + chr1_2:6969727-6969746 None:intergenic 55.0%
CATGGGCATAGACATGGCCA+TGG - chr1_2:6969725-6969744 Msa0052680:CDS 55.0%
CATAGACATGGCCATGGGCA+TGG - chr1_2:6969731-6969750 Msa0052680:CDS 55.0%
! TCGCTCAGCTTCAAGAGCGT+TGG - chr1_2:6968655-6968674 Msa0052680:CDS 55.0%
GGTTATCCACCGAGTCTTCG+CGG + chr1_2:6968809-6968828 None:intergenic 55.0%
CGATTTCCCGCCGTCTTCAT+TGG + chr1_2:6968856-6968875 None:intergenic 55.0%
GGGAAATCGGTGACTGAAGC+TGG - chr1_2:6968867-6968886 Msa0052680:CDS 55.0%
! CAGAAATCGTGGTGACTCGG+TGG - chr1_2:6968914-6968933 Msa0052680:CDS 55.0%
ACTTCACAACCACCGCAAGG+CGG + chr1_2:6968944-6968963 None:intergenic 55.0%
CAGACTTCACAACCACCGCA+AGG + chr1_2:6968947-6968966 None:intergenic 55.0%
GACAGCCGGAAATCAGTGAC+CGG - chr1_2:6968969-6968988 Msa0052680:CDS 55.0%
!! CAGCTCCGGTCACTGATTTC+CGG + chr1_2:6968977-6968996 None:intergenic 55.0%
GCTGTTGATCAGAATCGGCG+TGG - chr1_2:6969044-6969063 Msa0052680:CDS 55.0%
TAACCGTCGTGGAGTGGTTG+TGG - chr1_2:6969088-6969107 Msa0052680:CDS 55.0%
ACACCACAACCACTCCACGA+CGG + chr1_2:6969094-6969113 None:intergenic 55.0%
CGGAAACCTGTGACTGGAGA+TGG - chr1_2:6969125-6969144 Msa0052680:CDS 55.0%
GCGATTCCATCTCCAGTCAC+AGG + chr1_2:6969134-6969153 None:intergenic 55.0%
CATTCTGGTCGTAATCGCCG+CGG - chr1_2:6969182-6969201 Msa0052680:CDS 55.0%
CCGCGGAAATCTTGAGGGTT+TGG - chr1_2:6969199-6969218 Msa0052680:CDS 55.0%
TCGTCGTGAAATCGGCAAGG+AGG - chr1_2:6969298-6969317 Msa0052680:CDS 55.0%
CAGAAATCGGTGACCGGAGA+TGG - chr1_2:6969332-6969351 Msa0052680:CDS 55.0%
TCGGTGACCGGAGATGGAAT+CGG - chr1_2:6969338-6969357 Msa0052680:CDS 55.0%
!! CGGCGATAGAAGCGTTGATC+TGG - chr1_2:6969358-6969377 Msa0052680:CDS 55.0%
GATGGCGATGGTGACCATCA+AGG - chr1_2:6969689-6969708 Msa0052680:CDS 55.0%
! GACCATCAAGGTGATGGCCA+TGG - chr1_2:6969701-6969720 Msa0052680:CDS 55.0%
! AAGGTGATGGCCATGGCCAT+GGG - chr1_2:6969708-6969727 Msa0052680:CDS 55.0%
CATGTCTATGCCCATGGCCA+TGG + chr1_2:6969721-6969740 None:intergenic 55.0%
CATGGCCATGGGCATAGACA+TGG - chr1_2:6969719-6969738 Msa0052680:CDS 55.0%
CATGGCCATGTCTATGCCCA+TGG + chr1_2:6969727-6969746 None:intergenic 55.0%
CATGGGCATAGACATGGCCA+TGG - chr1_2:6969725-6969744 Msa0052680:CDS 55.0%
CATAGACATGGCCATGGGCA+TGG - chr1_2:6969731-6969750 Msa0052680:CDS 55.0%
ACCAGTGGATGAGCGACACG+TGG - chr1_2:6968728-6968747 Msa0052680:CDS 60.0%
AGTGGATGAGCGACACGTGG+CGG - chr1_2:6968731-6968750 Msa0052680:CDS 60.0%
TCGAAACCGCGAAGACTCGG+TGG - chr1_2:6968800-6968819 Msa0052680:CDS 60.0%
CGACAGCAACATGCACCGCA+CGG + chr1_2:6968833-6968852 None:intergenic 60.0%
GCTGTCGCCAATGAAGACGG+CGG - chr1_2:6968846-6968865 Msa0052680:CDS 60.0%
CTGTCGCCAATGAAGACGGC+GGG - chr1_2:6968847-6968866 Msa0052680:CDS 60.0%
CGGAAATCAGTGACCGGAGC+TGG - chr1_2:6968975-6968994 Msa0052680:CDS 60.0%
GCGTGGAAATCGCGACGACT+CGG - chr1_2:6969061-6969080 Msa0052680:CDS 60.0%
GACTCGGCGATTAACCGTCG+TGG - chr1_2:6969077-6969096 Msa0052680:CDS 60.0%
GGCGATTAACCGTCGTGGAG+TGG - chr1_2:6969082-6969101 Msa0052680:CDS 60.0%
TCGGTTGATCGGAATCGCCG+CGG - chr1_2:6969251-6969270 Msa0052680:CDS 60.0%
GGCCATGGCCATCACCTTGA+TGG + chr1_2:6969706-6969725 None:intergenic 60.0%
! CAAGGTGATGGCCATGGCCA+TGG - chr1_2:6969707-6969726 Msa0052680:CDS 60.0%
CATGGCCATGGGCATGGTCA+TGG - chr1_2:6969737-6969756 Msa0052680:CDS 60.0%
GGCATGGTCATGGTGGCCAT+GGG - chr1_2:6969747-6969766 Msa0052680:CDS 60.0%
GTCATGGTGGCCATGGGCAT+AGG - chr1_2:6969753-6969772 Msa0052680:CDS 60.0%
ACCAGTGGATGAGCGACACG+TGG - chr1_2:6968728-6968747 Msa0052680:CDS 60.0%
AGTGGATGAGCGACACGTGG+CGG - chr1_2:6968731-6968750 Msa0052680:CDS 60.0%
TCGAAACCGCGAAGACTCGG+TGG - chr1_2:6968800-6968819 Msa0052680:CDS 60.0%
CGACAGCAACATGCACCGCA+CGG + chr1_2:6968833-6968852 None:intergenic 60.0%
GCTGTCGCCAATGAAGACGG+CGG - chr1_2:6968846-6968865 Msa0052680:CDS 60.0%
CTGTCGCCAATGAAGACGGC+GGG - chr1_2:6968847-6968866 Msa0052680:CDS 60.0%
CGGAAATCAGTGACCGGAGC+TGG - chr1_2:6968975-6968994 Msa0052680:CDS 60.0%
GCGTGGAAATCGCGACGACT+CGG - chr1_2:6969061-6969080 Msa0052680:CDS 60.0%
GACTCGGCGATTAACCGTCG+TGG - chr1_2:6969077-6969096 Msa0052680:CDS 60.0%
GGCGATTAACCGTCGTGGAG+TGG - chr1_2:6969082-6969101 Msa0052680:CDS 60.0%
TCGGTTGATCGGAATCGCCG+CGG - chr1_2:6969251-6969270 Msa0052680:CDS 60.0%
GGCCATGGCCATCACCTTGA+TGG + chr1_2:6969706-6969725 None:intergenic 60.0%
! CAAGGTGATGGCCATGGCCA+TGG - chr1_2:6969707-6969726 Msa0052680:CDS 60.0%
CATGGCCATGGGCATGGTCA+TGG - chr1_2:6969737-6969756 Msa0052680:CDS 60.0%
GGCATGGTCATGGTGGCCAT+GGG - chr1_2:6969747-6969766 Msa0052680:CDS 60.0%
GTCATGGTGGCCATGGGCAT+AGG - chr1_2:6969753-6969772 Msa0052680:CDS 60.0%
! GCCACGTGTCGCTCATCCAC+TGG + chr1_2:6968732-6968751 None:intergenic 65.0%
TGAGCGACACGTGGCGGTTG+TGG - chr1_2:6968737-6968756 Msa0052680:CDS 65.0%
CTCGGTGGATAACCGCCGTG+CGG - chr1_2:6968815-6968834 Msa0052680:CDS 65.0%
CAGCAACATGCACCGCACGG+CGG + chr1_2:6968830-6968849 None:intergenic 65.0%
CTCGGTGGAGAACCGCCTTG+CGG - chr1_2:6968929-6968948 Msa0052680:CDS 65.0%
ACCGGAGCTGGAATCCGCGA+CGG - chr1_2:6968987-6969006 Msa0052680:CDS 65.0%
ACCGTCGCGGATTCCAGCTC+CGG + chr1_2:6968991-6969010 None:intergenic 65.0%
GGCCATGGGCATGGTCATGG+TGG - chr1_2:6969740-6969759 Msa0052680:CDS 65.0%
GGCCACCATGACCATGCCCA+TGG + chr1_2:6969745-6969764 None:intergenic 65.0%
GGGCATGGTCATGGTGGCCA+TGG - chr1_2:6969746-6969765 Msa0052680:CDS 65.0%
! GCCACGTGTCGCTCATCCAC+TGG + chr1_2:6968732-6968751 None:intergenic 65.0%
TGAGCGACACGTGGCGGTTG+TGG - chr1_2:6968737-6968756 Msa0052680:CDS 65.0%
CTCGGTGGATAACCGCCGTG+CGG - chr1_2:6968815-6968834 Msa0052680:CDS 65.0%
CAGCAACATGCACCGCACGG+CGG + chr1_2:6968830-6968849 None:intergenic 65.0%
CTCGGTGGAGAACCGCCTTG+CGG - chr1_2:6968929-6968948 Msa0052680:CDS 65.0%
ACCGGAGCTGGAATCCGCGA+CGG - chr1_2:6968987-6969006 Msa0052680:CDS 65.0%
ACCGTCGCGGATTCCAGCTC+CGG + chr1_2:6968991-6969010 None:intergenic 65.0%
GGCCATGGGCATGGTCATGG+TGG - chr1_2:6969740-6969759 Msa0052680:CDS 65.0%
GGCCACCATGACCATGCCCA+TGG + chr1_2:6969745-6969764 None:intergenic 65.0%
GGGCATGGTCATGGTGGCCA+TGG - chr1_2:6969746-6969765 Msa0052680:CDS 65.0%
GGTGGAGAACCGCCTTGCGG+TGG - chr1_2:6968932-6968951 Msa0052680:CDS 70.0%
GGTGGAGAACCGCCTTGCGG+TGG - chr1_2:6968932-6968951 Msa0052680:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 6968441 6969847 6968441 ID=Msa0052680;Name=Msa0052680
chr1_2 mRNA 6968441 6969847 6968441 ID=Msa0052680-mRNA-1;Parent=Msa0052680;Name=Msa0052680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|468
chr1_2 exon 6968441 6969847 6968441 ID=Msa0052680-mRNA-1:exon:2335;Parent=Msa0052680-mRNA-1
chr1_2 CDS 6968441 6969847 6968441 ID=Msa0052680-mRNA-1:cds;Parent=Msa0052680-mRNA-1
Gene Sequence

>Msa0052680

ATGTTAAAAAACAAACGGAACAACTTCTTCAACAAGAAGGAAGCTTGGGTAGCAGTAAAAACAAAAGAGAGTGAAAAAGGAAAAGGAAAAGAAAAAGAAAAAGGAAAAGAGATTGAAGAAGAAGAAAAAAAACAGAGTTTGGTAATGGAGGAGGAGAAGAAAGAAGAGAAGAAGAAGAAAGTTTATTCTCCTCTTCCTTCAAACTATGTTACTCTCGCTCAGCTTCAAGAGCGTTGGTTGAAGCAACAAAATGAAAAAAATCAACTAGAAAAAAAGGAGGATCATCTACCAGTGGATGAGCGACACGTGGCGGTTGTGGCTGAAACGAGTGTAACCGTTTCTAGGTCTAATCCTGTTGATCGAAACCGCGAAGACTCGGTGGATAACCGCCGTGCGGTGCATGTTGCTGTCGCCAATGAAGACGGCGGGAAATCGGTGACTGAAGCTGGAAGTGCTGATTATCGTAATCGAAGCAGAAATCGTGGTGACTCGGTGGAGAACCGCCTTGCGGTGGTTGTGAAGTCTGATGACAGCCGGAAATCAGTGACCGGAGCTGGAATCCGCGACGGTAACGCTGATAATGCAACTGATTCTAGGTTTATTGCTGTTGATCAGAATCGGCGTGGAAATCGCGACGACTCGGCGATTAACCGTCGTGGAGTGGTTGTGGTGTCTGAAGAGAATCGGAAACCTGTGACTGGAGATGGAATCGCTGATAATGCAACCGTTTCTAAGTCTAATCATTCTGGTCGTAATCGCCGCGGAAATCTTGAGGGTTTGGTAGAGAATCGTCGTGAAAACAGGAGGAAATCGGTTGATCGGAATCGCCGCGGAAATCTTGAGAGTTTGGTGGAGAATCGTCGTGAAATCGGCAAGGAGGATGAAGATGAGCAGAAATCGGTGACCGGAGATGGAATCGGCGATAGAAGCGTTGATCTGGATGGTAAGGTGGAGGAATCACAGAAGAAAAAGAAGAAGAAGATCAACCCATCGACGAGATGGAGACAGAACAAGAAGGCTAAGGAGAAGGAGGAGAGAAGAGCAATTGAAGAAGGTAGTGCTGCTAAGGAGGATGAAGTAGTTGCTGAGAAAACGAGTGTGAAAATCGAATTGAAAGATGAAGAGATTGTAGATTCGAAAACAGTTGATGAAGTTGAAGAGAAATTGAGGGTTTTATCTGTGAAATCTGAGAATGGAAAACAGAATTGGAGGTTCAGAAAAATGAACTATGGTATGAGAAAGAATGGTGATGGCGATGGTGACCATCAAGGTGATGGCCATGGCCATGGGCATAGACATGGCCATGGGCATGGTCATGGTGGCCATGGGCATAGGAATTTTAAGGAACAACAAAGCTCTAAGACTTGGGTGAAGAAGGATGGCAGTGTTGGAGAAATTGAGACATAG

Protein sequence

>Msa0052680

MLKNKRNNFFNKKEAWVAVKTKESEKGKGKEKEKGKEIEEEEKKQSLVMEEEKKEEKKKKVYSPLPSNYVTLAQLQERWLKQQNEKNQLEKKEDHLPVDERHVAVVAETSVTVSRSNPVDRNREDSVDNRRAVHVAVANEDGGKSVTEAGSADYRNRSRNRGDSVENRLAVVVKSDDSRKSVTGAGIRDGNADNATDSRFIAVDQNRRGNRDDSAINRRGVVVVSEENRKPVTGDGIADNATVSKSNHSGRNRRGNLEGLVENRRENRRKSVDRNRRGNLESLVENRREIGKEDEDEQKSVTGDGIGDRSVDLDGKVEESQKKKKKKINPSTRWRQNKKAKEKEERRAIEEGSAAKEDEVVAEKTSVKIELKDEEIVDSKTVDEVEEKLRVLSVKSENGKQNWRFRKMNYGMRKNGDGDGDHQGDGHGHGHRHGHGHGHGGHGHRNFKEQQSSKTWVKKDGSVGEIET*