Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455600 | XP_003600351.1 | 92.113 | 355 | 27 | 1 | 1 | 354 | 1 | 355 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455600 | sp|Q0DXZ1|CSLE2_ORYSJ | 52.632 | 380 | 159 | 7 | 3 | 362 | 13 | 391 | 1.45e-138 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455600 | G7IV14 | 92.113 | 355 | 27 | 1 | 1 | 354 | 1 | 355 | 0.0 | 695 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028950 | Msa0455600 | 0.802292 | 6.011638e-49 | -8.615850e-47 |
| Msa0035090 | Msa0455600 | 0.809923 | 1.488222e-50 | -8.615850e-47 |
| Msa0045660 | Msa0455600 | 0.807283 | 5.451614e-50 | -8.615850e-47 |
| Msa0046670 | Msa0455600 | 0.805497 | 1.297458e-49 | -8.615850e-47 |
| Msa0055530 | Msa0455600 | 0.804441 | 2.157362e-49 | -8.615850e-47 |
| Msa0062750 | Msa0455600 | 0.806933 | 6.467510e-50 | -8.615850e-47 |
| Msa0072910 | Msa0455600 | 0.825341 | 4.942527e-54 | -8.615850e-47 |
| Msa0094670 | Msa0455600 | 0.802067 | 6.689385e-49 | -8.615850e-47 |
| Msa0094700 | Msa0455600 | 0.817472 | 3.240081e-52 | -8.615850e-47 |
| Msa0107460 | Msa0455600 | 0.820942 | 5.253537e-53 | -8.615850e-47 |
| Msa0121080 | Msa0455600 | 0.803496 | 3.391398e-49 | -8.615850e-47 |
| Msa0131390 | Msa0455600 | 0.822401 | 2.415716e-53 | -8.615850e-47 |
| Msa0138800 | Msa0455600 | 0.816811 | 4.561966e-52 | -8.615850e-47 |
| Msa0168960 | Msa0455600 | 0.810453 | 1.144059e-50 | -8.615850e-47 |
| Msa0173850 | Msa0455600 | 0.805061 | 1.601053e-49 | -8.615850e-47 |
| Msa0177490 | Msa0455600 | 0.821447 | 4.017980e-53 | -8.615850e-47 |
| Msa0181020 | Msa0455600 | 0.801059 | 1.076326e-48 | -8.615850e-47 |
| Msa0185550 | Msa0455600 | 0.819901 | 9.103957e-53 | -8.615850e-47 |
| Msa0203330 | Msa0455600 | 0.807254 | 5.529469e-50 | -8.615850e-47 |
| Msa0206970 | Msa0455600 | 0.829074 | 6.308471e-55 | -8.615850e-47 |
| Msa0214730 | Msa0455600 | 0.810090 | 1.369830e-50 | -8.615850e-47 |
| Msa0224960 | Msa0455600 | 0.814261 | 1.685982e-51 | -8.615850e-47 |
| Msa0224980 | Msa0455600 | 0.812235 | 4.693914e-51 | -8.615850e-47 |
| Msa0225010 | Msa0455600 | 0.800287 | 1.546655e-48 | -8.615850e-47 |
| Msa0225030 | Msa0455600 | 0.813709 | 2.231558e-51 | -8.615850e-47 |
| Msa0226800 | Msa0455600 | 0.813251 | 2.813025e-51 | -8.615850e-47 |
| Msa0365150 | Msa0455600 | 0.801130 | 1.041212e-48 | -8.615850e-47 |
| Msa0372250 | Msa0455600 | 0.805797 | 1.122378e-49 | -8.615850e-47 |
| Msa0380420 | Msa0455600 | 0.811933 | 5.463126e-51 | -8.615850e-47 |
| Msa0411250 | Msa0455600 | 0.862692 | 4.232566e-64 | -8.615850e-47 |
| Msa0414990 | Msa0455600 | 0.807799 | 4.237550e-50 | -8.615850e-47 |
| Msa0421100 | Msa0455600 | 0.820297 | 7.388373e-53 | -8.615850e-47 |
| Msa0426480 | Msa0455600 | 0.828992 | 6.604952e-55 | -8.615850e-47 |
| Msa0434630 | Msa0455600 | 0.828943 | 6.787433e-55 | -8.615850e-47 |
| Msa0455600 | Msa0455610 | 0.815932 | 7.175783e-52 | -8.615850e-47 |
| Msa0455600 | Msa0457380 | 0.801070 | 1.070839e-48 | -8.615850e-47 |
| Msa0455600 | Msa0466100 | 0.804150 | 2.480644e-49 | -8.615850e-47 |
| Msa0455600 | Msa0473010 | 0.801833 | 7.471142e-49 | -8.615850e-47 |
| Msa0455600 | Msa0475740 | 0.807211 | 5.645641e-50 | -8.615850e-47 |
| Msa0455600 | Msa0476150 | 0.822251 | 2.618397e-53 | -8.615850e-47 |
| Msa0455600 | Msa0476180 | 0.815198 | 1.045138e-51 | -8.615850e-47 |
| Msa0455600 | Msa0482580 | 0.810713 | 1.005078e-50 | -8.615850e-47 |
| Msa0455600 | Msa0485350 | 0.809846 | 1.546281e-50 | -8.615850e-47 |
| Msa0455600 | Msa0498320 | 0.815592 | 8.544540e-52 | -8.615850e-47 |
| Msa0455600 | Msa0528740 | 0.815701 | 8.077877e-52 | -8.615850e-47 |
| Msa0455600 | Msa0528870 | 0.809703 | 1.659331e-50 | -8.615850e-47 |
| Msa0455600 | Msa0553350 | 0.839713 | 1.343843e-57 | -8.615850e-47 |
| Msa0455600 | Msa0554430 | 0.817542 | 3.123669e-52 | -8.615850e-47 |
| Msa0455600 | Msa0558850 | 0.824233 | 9.018060e-54 | -8.615850e-47 |
| Msa0455600 | Msa0568810 | 0.818955 | 1.495854e-52 | -8.615850e-47 |
| Msa0455600 | Msa0573300 | 0.800524 | 1.384204e-48 | -8.615850e-47 |
| Msa0455600 | Msa0575450 | 0.819851 | 9.348773e-53 | -8.615850e-47 |
| Msa0455600 | Msa0587060 | 0.811355 | 7.299296e-51 | -8.615850e-47 |
| Msa0455600 | Msa0607440 | 0.815373 | 9.558815e-52 | -8.615850e-47 |
| Msa0455600 | Msa0622390 | 0.811628 | 6.367308e-51 | -8.615850e-47 |
| Msa0455600 | Msa0622400 | 0.813347 | 2.680857e-51 | -8.615850e-47 |
| Msa0455600 | Msa0622690 | 0.801292 | 9.646845e-49 | -8.615850e-47 |
| Msa0455600 | Msa0623270 | 0.808487 | 3.023706e-50 | -8.615850e-47 |
| Msa0455600 | Msa0626890 | 0.836704 | 8.007260e-57 | -8.615850e-47 |
| Msa0455600 | Msa0647710 | 0.806587 | 7.649659e-50 | -8.615850e-47 |
| Msa0455600 | Msa0648190 | 0.818222 | 2.193325e-52 | -8.615850e-47 |
| Msa0455600 | Msa0648280 | 0.815833 | 7.548274e-52 | -8.615850e-47 |
| Msa0455600 | Msa0650360 | 0.820176 | 7.874953e-53 | -8.615850e-47 |
| Msa0455600 | Msa0690530 | 0.818102 | 2.335547e-52 | -8.615850e-47 |
| Msa0455600 | Msa0712070 | 0.803634 | 3.175301e-49 | -8.615850e-47 |
| Msa0455600 | Msa0712500 | 0.815760 | 7.835777e-52 | -8.615850e-47 |
| Msa0455600 | Msa0726000 | 0.805368 | 1.380960e-49 | -8.615850e-47 |
| Msa0455600 | Msa0734430 | 0.813326 | 2.708553e-51 | -8.615850e-47 |
| Msa0455600 | Msa0761930 | 0.814035 | 1.891541e-51 | -8.615850e-47 |
| Msa0455600 | Msa0790830 | 0.817804 | 2.727353e-52 | -8.615850e-47 |
| Msa0455600 | Msa0804930 | 0.805197 | 1.499365e-49 | -8.615850e-47 |
| Msa0455600 | Msa0814760 | 0.804684 | 1.919296e-49 | -8.615850e-47 |
| Msa0455600 | Msa0857080 | 0.803296 | 3.730563e-49 | -8.615850e-47 |
| Msa0455600 | Msa0873830 | 0.815450 | 9.185745e-52 | -8.615850e-47 |
| Msa0455600 | Msa0875130 | 0.837956 | 3.826234e-57 | -8.615850e-47 |
| Msa0455600 | Msa0901140 | 0.822716 | 2.041061e-53 | -8.615850e-47 |
| Msa0455600 | Msa0946650 | 0.804549 | 2.047685e-49 | -8.615850e-47 |
| Msa0455600 | Msa0968010 | 0.811151 | 8.079077e-51 | -8.615850e-47 |
| Msa0455600 | Msa0976950 | 0.814508 | 1.486665e-51 | -8.615850e-47 |
| Msa0455600 | Msa0982810 | 0.819428 | 1.167575e-52 | -8.615850e-47 |
| Msa0455600 | Msa1000470 | 0.817997 | 2.467030e-52 | -8.615850e-47 |
| Msa0455600 | Msa1011060 | 0.810488 | 1.124164e-50 | -8.615850e-47 |
| Msa0455600 | Msa1011240 | 0.816480 | 5.410346e-52 | -8.615850e-47 |
| Msa0455600 | Msa1030440 | 0.804279 | 2.331302e-49 | -8.615850e-47 |
| Msa0455600 | Msa1033670 | 0.809966 | 1.457167e-50 | -8.615850e-47 |
| Msa0455600 | Msa1061520 | 0.816650 | 4.957016e-52 | -8.615850e-47 |
| Msa0455600 | Msa1070900 | 0.803146 | 4.006591e-49 | -8.615850e-47 |
| Msa0455600 | Msa1070930 | 0.825104 | 5.623363e-54 | -8.615850e-47 |
| Msa0455600 | Msa1084490 | 0.801873 | 7.331623e-49 | -8.615850e-47 |
| Msa0455600 | Msa1126170 | 0.813479 | 2.507384e-51 | -8.615850e-47 |
| Msa0455600 | Msa1145370 | 0.823912 | 1.072699e-53 | -8.615850e-47 |
| Msa0455600 | Msa1151970 | 0.812586 | 3.934239e-51 | -8.615850e-47 |
| Msa0455600 | Msa1156210 | 0.817686 | 2.899872e-52 | -8.615850e-47 |
| Msa0455600 | Msa1183730 | 0.805497 | 1.297458e-49 | -8.615850e-47 |
| Msa0455600 | Msa1184640 | 0.802724 | 4.898732e-49 | -8.615850e-47 |
| Msa0455600 | Msa1207280 | 0.800977 | 1.118848e-48 | -8.615850e-47 |
| Msa0455600 | Msa1218720 | 0.812222 | 4.724835e-51 | -8.615850e-47 |
| Msa0455600 | Msa1224140 | 0.811537 | 6.663092e-51 | -8.615850e-47 |
| Msa0455600 | Msa1224150 | 0.813238 | 2.831405e-51 | -8.615850e-47 |
| Msa0455600 | Msa1228880 | 0.808541 | 2.944493e-50 | -8.615850e-47 |
| Msa0455600 | Msa1267330 | 0.821937 | 3.095807e-53 | -8.615850e-47 |
| Msa0455600 | Msa1279340 | 0.803001 | 4.293532e-49 | -8.615850e-47 |
| Msa0455600 | Msa1280020 | 0.802005 | 6.887329e-49 | -8.615850e-47 |
| Msa0455600 | Msa1302750 | 0.805802 | 1.119742e-49 | -8.615850e-47 |
| Msa0455600 | Msa1302920 | 0.804343 | 2.261444e-49 | -8.615850e-47 |
| Msa0455600 | Msa1316720 | 0.827159 | 1.824585e-54 | -8.615850e-47 |
| Msa0455600 | Msa1319440 | 0.802567 | 5.275822e-49 | -8.615850e-47 |
| Msa0455600 | Msa1319520 | 0.811677 | 6.210374e-51 | -8.615850e-47 |
| Msa0455600 | Msa1325980 | 0.806675 | 7.330187e-50 | -8.615850e-47 |
| Msa0455600 | Msa1331900 | 0.818110 | 2.325035e-52 | -8.615850e-47 |
| Msa0455600 | Msa1353270 | 0.810501 | 1.117200e-50 | -8.615850e-47 |
| Msa0455600 | Msa1368730 | 0.819484 | 1.133550e-52 | -8.615850e-47 |
| Msa0455600 | Msa1371840 | 0.811131 | 8.162489e-51 | -8.615850e-47 |
| Msa0455600 | Msa1374810 | 0.826496 | 2.627243e-54 | -8.615850e-47 |
| Msa0455600 | Msa1375630 | 0.814791 | 1.287141e-51 | -8.615850e-47 |
| Msa0455600 | Msa1379070 | 0.817181 | 3.767781e-52 | -8.615850e-47 |
| Msa0455600 | Msa1379090 | 0.817065 | 4.000795e-52 | -8.615850e-47 |
| Msa0455600 | Msa1419040 | 0.811690 | 6.170877e-51 | -8.615850e-47 |
| Msa0455600 | Msa1424240 | 0.807241 | 5.565668e-50 | -8.615850e-47 |
| Msa0455600 | Msa1451840 | 0.819529 | 1.107063e-52 | -8.615850e-47 |
| Msa0258380 | Msa0455600 | 0.836850 | 7.346682e-57 | -8.615850e-47 |
| Msa0258410 | Msa0455600 | 0.808416 | 3.130629e-50 | -8.615850e-47 |
| Msa0266010 | Msa0455600 | 0.819005 | 1.457540e-52 | -8.615850e-47 |
| Msa0288360 | Msa0455600 | 0.805403 | 1.357577e-49 | -8.615850e-47 |
| Msa0319090 | Msa0455600 | 0.806843 | 6.755626e-50 | -8.615850e-47 |
| Msa0335740 | Msa0455600 | 0.814854 | 1.246405e-51 | -8.615850e-47 |
| Msa0340440 | Msa0455600 | 0.817715 | 2.855662e-52 | -8.615850e-47 |
| Msa0350020 | Msa0455600 | 0.805533 | 1.275016e-49 | -8.615850e-47 |
| Msa0352200 | Msa0455600 | 0.825494 | 4.546640e-54 | -8.615850e-47 |
| Msa0354490 | Msa0455600 | 0.831358 | 1.746320e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455600 | MtrunA17_Chr3g0102541 | 92.113 | 355 | 27 | 1 | 1 | 354 | 1 | 355 | 0.0 | 695 |
| Msa0455600 | MtrunA17_Chr3g0102531 | 89.916 | 357 | 36 | 0 | 1 | 357 | 1 | 357 | 0.0 | 678 |
| Msa0455600 | MtrunA17_Chr3g0102551 | 70.994 | 362 | 93 | 4 | 2 | 352 | 4 | 364 | 0.0 | 546 |
| Msa0455600 | MtrunA17_Chr8g0364641 | 42.169 | 332 | 175 | 7 | 38 | 357 | 221 | 547 | 2.31e-81 | 267 |
| Msa0455600 | MtrunA17_Chr2g0322341 | 41.503 | 306 | 158 | 8 | 52 | 349 | 52 | 344 | 1.21e-78 | 245 |
| Msa0455600 | MtrunA17_Chr1g0201731 | 40.663 | 332 | 181 | 7 | 38 | 357 | 307 | 634 | 1.93e-78 | 261 |
| Msa0455600 | MtrunA17_Chr8g0379241 | 39.759 | 332 | 184 | 7 | 38 | 357 | 212 | 539 | 2.06e-78 | 259 |
| Msa0455600 | MtrunA17_Chr3g0088821 | 41.141 | 333 | 178 | 9 | 38 | 357 | 287 | 614 | 2.66e-78 | 260 |
| Msa0455600 | MtrunA17_Chr2g0322361 | 39.806 | 309 | 172 | 5 | 52 | 355 | 52 | 351 | 3.00e-78 | 255 |
| Msa0455600 | MtrunA17_Chr2g0284211 | 39.759 | 332 | 184 | 7 | 38 | 357 | 197 | 524 | 5.79e-78 | 258 |
| Msa0455600 | MtrunA17_Chr3g0137951 | 40.361 | 332 | 182 | 7 | 38 | 357 | 297 | 624 | 1.69e-77 | 258 |
| Msa0455600 | MtrunA17_Chr8g0383701 | 39.759 | 332 | 184 | 7 | 38 | 357 | 305 | 632 | 2.03e-77 | 258 |
| Msa0455600 | MtrunA17_Chr4g0073711 | 39.759 | 332 | 184 | 7 | 38 | 357 | 267 | 594 | 5.75e-77 | 256 |
| Msa0455600 | MtrunA17_Chr2g0322371 | 40.260 | 308 | 167 | 6 | 52 | 355 | 47 | 341 | 6.78e-77 | 251 |
| Msa0455600 | MtrunA17_Chr8g0352231 | 38.872 | 337 | 190 | 7 | 33 | 357 | 282 | 614 | 2.37e-75 | 252 |
| Msa0455600 | MtrunA17_Chr4g0025201 | 41.304 | 322 | 172 | 9 | 38 | 355 | 37 | 345 | 7.36e-75 | 246 |
| Msa0455600 | MtrunA17_Chr2g0322351 | 40.122 | 329 | 167 | 7 | 38 | 355 | 37 | 346 | 1.05e-74 | 245 |
| Msa0455600 | MtrunA17_Chr4g0046401 | 41.275 | 298 | 165 | 5 | 52 | 349 | 59 | 346 | 2.47e-73 | 241 |
| Msa0455600 | MtrunA17_Chr7g0267731 | 38.710 | 341 | 193 | 7 | 29 | 357 | 190 | 526 | 2.98e-73 | 245 |
| Msa0455600 | MtrunA17_Chr2g0296991 | 38.344 | 326 | 186 | 6 | 44 | 357 | 243 | 565 | 1.26e-72 | 244 |
| Msa0455600 | MtrunA17_Chr1g0183381 | 36.932 | 352 | 196 | 8 | 18 | 357 | 129 | 466 | 2.44e-72 | 241 |
| Msa0455600 | MtrunA17_Chr3g0078671 | 40.498 | 321 | 175 | 7 | 38 | 346 | 254 | 570 | 2.68e-72 | 243 |
| Msa0455600 | MtrunA17_Chr1g0186381 | 40.059 | 337 | 174 | 7 | 18 | 345 | 25 | 342 | 1.15e-71 | 237 |
| Msa0455600 | MtrunA17_Chr2g0307191 | 38.889 | 342 | 170 | 9 | 18 | 353 | 18 | 326 | 2.24e-70 | 233 |
| Msa0455600 | MtrunA17_Chr3g0095791 | 40.134 | 299 | 147 | 5 | 52 | 345 | 46 | 317 | 5.57e-70 | 232 |
| Msa0455600 | MtrunA17_Chr2g0298581 | 40.816 | 294 | 153 | 4 | 52 | 345 | 46 | 318 | 6.77e-69 | 229 |
| Msa0455600 | MtrunA17_Chr3g0077511 | 39.677 | 310 | 152 | 6 | 52 | 354 | 46 | 327 | 5.55e-68 | 226 |
| Msa0455600 | MtrunA17_Chr1g0165421 | 33.418 | 392 | 191 | 9 | 22 | 345 | 270 | 659 | 2.81e-66 | 227 |
| Msa0455600 | MtrunA17_Chr1g0165411 | 34.239 | 368 | 172 | 9 | 44 | 345 | 282 | 645 | 1.77e-65 | 224 |
| Msa0455600 | MtrunA17_Chr4g0039801 | 33.333 | 402 | 201 | 9 | 21 | 357 | 288 | 687 | 5.82e-65 | 223 |
| Msa0455600 | MtrunA17_Chr5g0410641 | 33.158 | 380 | 186 | 8 | 44 | 357 | 289 | 666 | 9.92e-65 | 222 |
| Msa0455600 | MtrunA17_Chr7g0269741 | 33.862 | 378 | 185 | 7 | 44 | 357 | 334 | 710 | 1.92e-63 | 219 |
| Msa0455600 | MtrunA17_Chr2g0297351 | 33.421 | 380 | 180 | 10 | 44 | 354 | 196 | 571 | 1.32e-61 | 213 |
| Msa0455600 | MtrunA17_Chr7g0274751 | 33.333 | 369 | 207 | 10 | 24 | 357 | 111 | 475 | 1.98e-61 | 211 |
| Msa0455600 | MtrunA17_Chr2g0307241 | 39.130 | 184 | 95 | 5 | 1 | 182 | 6 | 174 | 2.56e-35 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0455600 | AT1G55850.1 | 54.545 | 352 | 149 | 5 | 8 | 354 | 18 | 363 | 7.12e-138 | 410 |
| Msa0455600 | AT4G24010.1 | 41.641 | 329 | 186 | 3 | 21 | 346 | 26 | 351 | 1.39e-85 | 275 |
| Msa0455600 | AT4G23990.1 | 43.046 | 302 | 166 | 3 | 59 | 357 | 83 | 381 | 1.57e-84 | 272 |
| Msa0455600 | AT4G24000.1 | 42.042 | 333 | 178 | 5 | 21 | 349 | 23 | 344 | 2.37e-84 | 271 |
| Msa0455600 | AT5G17420.1 | 40.361 | 332 | 182 | 7 | 38 | 357 | 254 | 581 | 2.47e-78 | 260 |
| Msa0455600 | AT2G25540.1 | 39.458 | 332 | 185 | 7 | 38 | 357 | 271 | 598 | 4.39e-77 | 257 |
| Msa0455600 | AT4G39350.1 | 39.458 | 332 | 185 | 7 | 38 | 357 | 293 | 620 | 9.40e-77 | 256 |
| Msa0455600 | AT4G18780.1 | 39.875 | 321 | 177 | 7 | 38 | 346 | 200 | 516 | 3.89e-76 | 253 |
| Msa0455600 | AT5G05170.1 | 38.710 | 341 | 193 | 7 | 29 | 357 | 266 | 602 | 4.51e-76 | 254 |
| Msa0455600 | AT4G32410.1 | 38.166 | 338 | 193 | 7 | 32 | 357 | 285 | 618 | 1.39e-75 | 253 |
| Msa0455600 | AT5G64740.1 | 40.060 | 332 | 183 | 7 | 38 | 357 | 292 | 619 | 1.49e-75 | 253 |
| Msa0455600 | AT5G09870.1 | 39.759 | 332 | 184 | 7 | 38 | 357 | 280 | 607 | 3.71e-75 | 251 |
| Msa0455600 | AT2G21770.1 | 39.759 | 332 | 184 | 7 | 38 | 357 | 298 | 625 | 6.16e-75 | 251 |
| Msa0455600 | AT5G44030.1 | 38.957 | 326 | 184 | 6 | 44 | 357 | 236 | 558 | 4.59e-73 | 246 |
| Msa0455600 | AT5G44030.2 | 38.957 | 326 | 184 | 6 | 44 | 357 | 265 | 587 | 6.34e-73 | 245 |
| Msa0455600 | AT2G32620.2 | 41.234 | 308 | 157 | 10 | 38 | 336 | 39 | 331 | 7.99e-69 | 226 |
| Msa0455600 | AT4G15320.5 | 38.728 | 346 | 187 | 10 | 8 | 344 | 10 | 339 | 1.67e-68 | 229 |
| Msa0455600 | AT4G15320.3 | 38.728 | 346 | 187 | 10 | 8 | 344 | 10 | 339 | 1.75e-68 | 229 |
| Msa0455600 | AT2G32620.3 | 41.234 | 308 | 157 | 10 | 38 | 336 | 39 | 331 | 3.17e-68 | 226 |
| Msa0455600 | AT2G32530.1 | 39.048 | 315 | 178 | 9 | 34 | 344 | 35 | 339 | 7.22e-68 | 228 |
| Msa0455600 | AT2G32620.1 | 41.234 | 308 | 157 | 10 | 38 | 336 | 39 | 331 | 1.86e-67 | 226 |
| Msa0455600 | AT2G32540.1 | 41.017 | 295 | 152 | 6 | 51 | 336 | 50 | 331 | 1.39e-66 | 224 |
| Msa0455600 | AT4G38190.1 | 33.251 | 403 | 194 | 11 | 18 | 354 | 272 | 665 | 1.46e-66 | 228 |
| Msa0455600 | AT4G15320.4 | 36.842 | 361 | 188 | 10 | 8 | 344 | 10 | 354 | 1.02e-65 | 222 |
| Msa0455600 | AT1G32180.1 | 34.190 | 389 | 177 | 9 | 44 | 357 | 143 | 527 | 1.15e-65 | 224 |
| Msa0455600 | AT1G32180.2 | 34.190 | 389 | 177 | 9 | 44 | 357 | 143 | 527 | 1.15e-65 | 224 |
| Msa0455600 | AT2G33100.2 | 35.676 | 370 | 166 | 10 | 44 | 345 | 204 | 569 | 7.84e-65 | 223 |
| Msa0455600 | AT2G33100.1 | 35.676 | 370 | 166 | 10 | 44 | 345 | 204 | 569 | 7.84e-65 | 223 |
| Msa0455600 | AT2G32610.1 | 39.936 | 313 | 163 | 10 | 34 | 336 | 35 | 332 | 4.39e-64 | 218 |
| Msa0455600 | AT5G44030.3 | 41.445 | 263 | 144 | 5 | 91 | 346 | 9 | 268 | 2.47e-63 | 216 |
| Msa0455600 | AT3G03050.1 | 33.957 | 374 | 183 | 7 | 47 | 357 | 318 | 690 | 9.95e-63 | 217 |
| Msa0455600 | AT1G02730.1 | 34.031 | 382 | 182 | 7 | 44 | 357 | 339 | 718 | 1.37e-62 | 217 |
| Msa0455600 | AT5G16910.1 | 33.690 | 374 | 184 | 7 | 47 | 357 | 321 | 693 | 1.14e-61 | 214 |
| Msa0455600 | AT4G15320.2 | 34.184 | 392 | 187 | 11 | 8 | 344 | 10 | 385 | 3.06e-60 | 207 |
| Msa0455600 | AT4G15290.1 | 38.462 | 312 | 168 | 9 | 42 | 344 | 43 | 339 | 2.11e-59 | 205 |
| Msa0455600 | AT2G32620.4 | 42.915 | 247 | 120 | 7 | 99 | 336 | 1 | 235 | 1.11e-54 | 191 |
| Msa0455600 | AT4G15320.1 | 31.034 | 435 | 186 | 12 | 8 | 344 | 10 | 428 | 1.71e-53 | 189 |
| Msa0455600 | AT4G23990.2 | 38.150 | 173 | 104 | 1 | 195 | 364 | 2 | 174 | 1.61e-35 | 136 |
| Msa0455600 | AT4G24000.2 | 42.138 | 159 | 80 | 3 | 195 | 349 | 2 | 152 | 3.70e-33 | 129 |
Find 85 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGCTCTTTAGGATTATT+TGG | 0.116886 | 3_3:-48605009 | None:intergenic |
| TATGCCCACCTTGGTATATT+TGG | 0.175535 | 3_3:+48605952 | Msa0455600:CDS |
| ATTATTGGTGGTTCAATATC+TGG | 0.182940 | 3_3:-48604778 | None:intergenic |
| CTTTGAAGTTATGATGAAAT+TGG | 0.227274 | 3_3:-48605991 | None:intergenic |
| TACCCAAAGAAGATGGAAAA+TGG | 0.232894 | 3_3:+48602677 | Msa0455600:CDS |
| GGGAAGGGTTGCCTGAAAAT+AGG | 0.246274 | 3_3:-48602775 | None:intergenic |
| TTGATGGCCAAAAGCTCTTT+AGG | 0.251827 | 3_3:-48605018 | None:intergenic |
| TGAAAATAGGGTTCCATCTA+AGG | 0.252001 | 3_3:-48602762 | None:intergenic |
| CAAACAATTCTCAATCTCTA+AGG | 0.258363 | 3_3:+48606285 | Msa0455600:CDS |
| TTGTAGGAATTTGCTCCATT+TGG | 0.281017 | 3_3:+48602635 | Msa0455600:CDS |
| TTCTCTTTCTCTTTGTTTGT+AGG | 0.285077 | 3_3:+48602619 | Msa0455600:CDS |
| ACCTTGAATCTCTTGCAAAA+TGG | 0.308345 | 3_3:-48604940 | None:intergenic |
| TGACATATACGGTGGTTCTT+TGG | 0.317006 | 3_3:+48606397 | Msa0455600:CDS |
| TGATTAGTTTGTTACCTTGA+TGG | 0.319733 | 3_3:-48605034 | None:intergenic |
| GGATGCACTTTGCTTCTTCA+TGG | 0.325256 | 3_3:+48606307 | Msa0455600:CDS |
| ACTGTGTTAATCACCATTAT+TGG | 0.325856 | 3_3:-48604793 | None:intergenic |
| TGCCTTTGTGCAGGCTCCTC+AGG | 0.325914 | 3_3:+48606352 | Msa0455600:CDS |
| AAATAATCCTAAAGAGCTTT+TGG | 0.329209 | 3_3:+48605011 | Msa0455600:CDS |
| TTTGAAGTTATGATGAAATT+GGG | 0.331599 | 3_3:-48605990 | None:intergenic |
| TGTAGGAATTTGCTCCATTT+GGG | 0.331776 | 3_3:+48602636 | Msa0455600:CDS |
| CTTCTTCATGGATGAAGAAA+AGG | 0.332640 | 3_3:+48606319 | Msa0455600:CDS |
| TCCTTCGCCAAGCCCTTAGA+TGG | 0.335267 | 3_3:+48602749 | Msa0455600:CDS |
| TTCTGTTCTTGATCTGAGAT+TGG | 0.339592 | 3_3:+48606909 | Msa0455600:CDS |
| GATTGCTTTGTGCTGAACTA+TGG | 0.350824 | 3_3:+48602710 | Msa0455600:CDS |
| AGATATTGAACCACCAATAA+TGG | 0.352515 | 3_3:+48604780 | Msa0455600:CDS |
| AAAGCTCTTTAGGATTATTT+GGG | 0.360058 | 3_3:-48605008 | None:intergenic |
| AAGAAGATGGAAAATGGGTT+TGG | 0.382244 | 3_3:+48602683 | Msa0455600:CDS |
| ATAGAGAATGTACCAAGATA+TGG | 0.396702 | 3_3:+48605551 | Msa0455600:intron |
| CTACTCGACTTTCCATATCT+TGG | 0.397111 | 3_3:-48605563 | None:intergenic |
| CTTTGTGCTGAACTATGGTT+TGG | 0.397394 | 3_3:+48602715 | Msa0455600:CDS |
| CTTCGGTACTTCACCCAACT+TGG | 0.414455 | 3_3:-48605595 | None:intergenic |
| TGATTTGAGTATGCTTCCTT+CGG | 0.414471 | 3_3:-48605612 | None:intergenic |
| GGAAGGGTTGCCTGAAAATA+GGG | 0.417513 | 3_3:-48602774 | None:intergenic |
| GATGGAAAATGGGTTTGGAT+TGG | 0.417771 | 3_3:+48602688 | Msa0455600:CDS |
| ATAGATACTGCTTCATAGAA+AGG | 0.419423 | 3_3:+48605901 | Msa0455600:intron |
| TTCTTTGGCTATAGCTTATG+AGG | 0.433152 | 3_3:+48606412 | Msa0455600:CDS |
| TACCTTTGAGAGAGTCTTTG+TGG | 0.437674 | 3_3:-48602796 | None:intergenic |
| CTTCTAAATTTGCAAAGCAT+TGG | 0.440808 | 3_3:+48604914 | Msa0455600:CDS |
| TTTCATCATAACTTCAAAGC+TGG | 0.443682 | 3_3:+48605995 | Msa0455600:CDS |
| GCTCAAGAATTAACAAAGAT+GGG | 0.444585 | 3_3:+48602532 | Msa0455600:exon |
| CACACAAATATGTCCACTTT+GGG | 0.444982 | 3_3:-48604745 | None:intergenic |
| AGCTCAAGAATTAACAAAGA+TGG | 0.448254 | 3_3:+48602531 | Msa0455600:exon |
| TTTGAGACAAAGAGAGGTAA+GGG | 0.451655 | 3_3:+48602577 | Msa0455600:CDS |
| TGAGAGAGTCTTTGTGGGAA+GGG | 0.458120 | 3_3:-48602790 | None:intergenic |
| CCTCTCTTTGTCTCAAACAA+TGG | 0.463648 | 3_3:-48602571 | None:intergenic |
| AGCTGGAGCTATGAATTCAT+TGG | 0.478202 | 3_3:+48606012 | Msa0455600:CDS |
| GGAAGCATACTCAAATCATA+AGG | 0.479194 | 3_3:+48605617 | Msa0455600:CDS |
| ACCCAAAGAAGATGGAAAAT+GGG | 0.481854 | 3_3:+48602678 | Msa0455600:CDS |
| CTTTGTTAATTCTTGAGCTG+TGG | 0.486549 | 3_3:-48602527 | None:intergenic |
| TAGGGTTCCATCTAAGGGCT+TGG | 0.486681 | 3_3:-48602756 | None:intergenic |
| GTTTGAGACAAAGAGAGGTA+AGG | 0.489714 | 3_3:+48602576 | Msa0455600:CDS |
| ACACACAAATATGTCCACTT+TGG | 0.492778 | 3_3:-48604746 | None:intergenic |
| GTAGAAAATGCATCCAAGTT+GGG | 0.500272 | 3_3:+48605582 | Msa0455600:CDS |
| ACATGAAATTGCCTTTGTGC+AGG | 0.505115 | 3_3:+48606343 | Msa0455600:CDS |
| ACTCAATCTGTAAACCCAAA+TGG | 0.508314 | 3_3:-48602650 | None:intergenic |
| GTGTTAATCACCATTATTGG+TGG | 0.509771 | 3_3:-48604790 | None:intergenic |
| AGTTACATACCCAAAGAAGA+TGG | 0.514625 | 3_3:+48602670 | Msa0455600:CDS |
| TTGAGAGAGTCTTTGTGGGA+AGG | 0.517836 | 3_3:-48602791 | None:intergenic |
| AAATATGCACTTGGCGACCT+AGG | 0.526790 | 3_3:-48604967 | None:intergenic |
| TTCTTCATGGATGAAGAAAA+GGG | 0.528326 | 3_3:+48606320 | Msa0455600:CDS |
| ACCTTTGAGAGAGTCTTTGT+GGG | 0.530918 | 3_3:-48602795 | None:intergenic |
| AGTAGAAAATGCATCCAAGT+TGG | 0.531734 | 3_3:+48605581 | Msa0455600:CDS |
| AGTGGACATATTTGTGTGTA+CGG | 0.534171 | 3_3:+48604750 | Msa0455600:CDS |
| TGTCATCAATGATTAGCAAT+GGG | 0.542769 | 3_3:+48606228 | Msa0455600:CDS |
| TCCATCTAAGGGCTTGGCGA+AGG | 0.544391 | 3_3:-48602750 | None:intergenic |
| AAACAATTCTCAATCTCTAA+GGG | 0.548566 | 3_3:+48606286 | Msa0455600:CDS |
| TACACACTAAGCTTCTCTGT+TGG | 0.555790 | 3_3:-48604841 | None:intergenic |
| GTGTATCTTTCAGATGATGC+TGG | 0.557262 | 3_3:+48604859 | Msa0455600:CDS |
| TAACACAGTATTATCTGTGA+TGG | 0.561776 | 3_3:+48604807 | Msa0455600:CDS |
| TTGAAGTTATGATGAAATTG+GGG | 0.563444 | 3_3:-48605989 | None:intergenic |
| TGAGAACATGCTACCCAAAG+TGG | 0.566397 | 3_3:+48604732 | Msa0455600:CDS |
| GTGTCATCAATGATTAGCAA+TGG | 0.569343 | 3_3:+48606227 | Msa0455600:CDS |
| CCATTGTTTGAGACAAAGAG+AGG | 0.595694 | 3_3:+48602571 | Msa0455600:CDS |
| CGAGCCAAATATACCAAGGT+GGG | 0.599351 | 3_3:-48605956 | None:intergenic |
| GACAATGCTAGAGATGAAGA+TGG | 0.605747 | 3_3:+48605923 | Msa0455600:CDS |
| GAAAATAGGGTTCCATCTAA+GGG | 0.618382 | 3_3:-48602761 | None:intergenic |
| ACAGTCTTGAAATATGCACT+TGG | 0.625451 | 3_3:-48604976 | None:intergenic |
| CAAGTTGGGTGAAGTACCGA+AGG | 0.628457 | 3_3:+48605596 | Msa0455600:CDS |
| CTCAAGAATTAACAAAGATG+GGG | 0.628934 | 3_3:+48602533 | Msa0455600:exon |
| TCCCACAAAGACTCTCTCAA+AGG | 0.632973 | 3_3:+48602794 | Msa0455600:CDS |
| ATACTTGAAGAATTGTGTCA+TGG | 0.633922 | 3_3:-48605677 | None:intergenic |
| CTCACGAGCCAAATATACCA+AGG | 0.657691 | 3_3:-48605960 | None:intergenic |
| AGAGATTCAAGGTTGAACCT+AGG | 0.664021 | 3_3:+48604950 | Msa0455600:CDS |
| ACGAGCCAAATATACCAAGG+TGG | 0.686997 | 3_3:-48605957 | None:intergenic |
| GACCTGAGGAGCCTGCACAA+AGG | 0.692272 | 3_3:-48606354 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAAAAATAATATTGT+TGG | - | chr3_3:48602987-48603006 | None:intergenic | 10.0% |
| !! | AAAAAAATACAAAATAAAAC+TGG | + | chr3_3:48603259-48603278 | Msa0455600:intron | 10.0% |
| !! | AAAAAATACAAAATAAAACT+GGG | + | chr3_3:48603260-48603279 | Msa0455600:intron | 10.0% |
| !!! | TAAATTTAATTTTGAATGTT+GGG | - | chr3_3:48604291-48604310 | None:intergenic | 10.0% |
| !!! | TTAAATTTAATTTTGAATGT+TGG | - | chr3_3:48604292-48604311 | None:intergenic | 10.0% |
| !! | ATTATTATGAATAAAATTTG+CGG | + | chr3_3:48605241-48605260 | Msa0455600:intron | 10.0% |
| !!! | TTGATTTTTTTTTTTTTTGA+AGG | - | chr3_3:48605396-48605415 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATCAAATCATA+AGG | + | chr3_3:48605402-48605421 | Msa0455600:intron | 10.0% |
| !! | AATTTAATATAACAATTAGT+TGG | + | chr3_3:48605861-48605880 | Msa0455600:intron | 10.0% |
| !! | CTCAAAAAAAAAAAAAATGT+TGG | - | chr3_3:48603023-48603042 | None:intergenic | 15.0% |
| !! | AAAAATACAAAATAAAACTG+GGG | + | chr3_3:48603261-48603280 | Msa0455600:intron | 15.0% |
| !!! | ATATTTTATTAAGACTGTAA+AGG | + | chr3_3:48604369-48604388 | Msa0455600:intron | 15.0% |
| !!! | TATTTTATTAAGACTGTAAA+GGG | + | chr3_3:48604370-48604389 | Msa0455600:intron | 15.0% |
| !!! | AAATATTTTGGTTAACTTTT+AGG | + | chr3_3:48605159-48605178 | Msa0455600:intron | 15.0% |
| !!! | GCAAAAAAAATATATTTTGA+AGG | - | chr3_3:48605470-48605489 | None:intergenic | 15.0% |
| !! | TATTAAATTATTAGCAAATC+AGG | - | chr3_3:48605850-48605869 | None:intergenic | 15.0% |
| !! | TCTATTAATAATACATAGTT+TGG | - | chr3_3:48606479-48606498 | None:intergenic | 15.0% |
| !!! | AACAAAGATATTTTGTTTTA+AGG | - | chr3_3:48606531-48606550 | None:intergenic | 15.0% |
| !! | ATATCTACTTAAAGTTTATT+TGG | - | chr3_3:48606610-48606629 | None:intergenic | 15.0% |
| !! | AAATAAACTTTAAGTAGATA+TGG | + | chr3_3:48606609-48606628 | Msa0455600:intron | 15.0% |
| !! | CAAAAAAATAATATTGTTGG+TGG | - | chr3_3:48602984-48603003 | None:intergenic | 20.0% |
| !! | ATTAAATAAGCATGTATTAC+TGG | - | chr3_3:48603084-48603103 | None:intergenic | 20.0% |
| !! | AAAATACAAAATAAAACTGG+GGG | + | chr3_3:48603262-48603281 | Msa0455600:intron | 20.0% |
| !!! | AGAACTTTCTTTAAAAAAAC+CGG | + | chr3_3:48604079-48604098 | Msa0455600:intron | 20.0% |
| !!! | AATGATTGATTTGATGATTT+TGG | + | chr3_3:48604455-48604474 | Msa0455600:intron | 20.0% |
| !!! | ATCATAAGGAATTTTTTACT+TGG | + | chr3_3:48605416-48605435 | Msa0455600:intron | 20.0% |
| !! | GATCATCAATATGTAAATAA+TGG | + | chr3_3:48605507-48605526 | Msa0455600:intron | 20.0% |
| !! | TAGGTATTTGGATAATTTAA+GGG | - | chr3_3:48605806-48605825 | None:intergenic | 20.0% |
| !!! | TTTGAAGTTATGATGAAATT+GGG | - | chr3_3:48605993-48606012 | None:intergenic | 20.0% |
| !! | TCGTGGATTTAAATTTAATT+AGG | + | chr3_3:48606077-48606096 | Msa0455600:intron | 20.0% |
| !!! | TCATTGTATACTTTCTTTTA+GGG | - | chr3_3:48606177-48606196 | None:intergenic | 20.0% |
| !!! | TTCATTGTATACTTTCTTTT+AGG | - | chr3_3:48606178-48606197 | None:intergenic | 20.0% |
| !! | GTATACAATGAATTAATTGT+TGG | + | chr3_3:48606186-48606205 | Msa0455600:intron | 20.0% |
| !! | ATCACAAAAAATGACATATA+CGG | + | chr3_3:48606386-48606405 | Msa0455600:CDS | 20.0% |
| !!! | TTTTTATTTTCTTTTTGGTG+TGG | + | chr3_3:48606794-48606813 | Msa0455600:intron | 20.0% |
| !!! | AACTATGGTTTGGTTTTTAT+TGG | + | chr3_3:48602725-48602744 | Msa0455600:CDS | 25.0% |
| ! | GGTGAAAACTAAATAGAAAT+AGG | - | chr3_3:48602963-48602982 | None:intergenic | 25.0% |
| ! | AGTTTGGTACTATATAACTT+GGG | - | chr3_3:48603441-48603460 | None:intergenic | 25.0% |
| ! | AAGTTTGGTACTATATAACT+TGG | - | chr3_3:48603442-48603461 | None:intergenic | 25.0% |
| ! | AACCTGTTATGAAACATATA+CGG | + | chr3_3:48603716-48603735 | Msa0455600:intron | 25.0% |
| ! | CTTTAGTTATGGTTTCAATT+TGG | - | chr3_3:48603772-48603791 | None:intergenic | 25.0% |
| ! | CAAATTGAAACCATAACTAA+AGG | + | chr3_3:48603770-48603789 | Msa0455600:intron | 25.0% |
| ! | TTAAAGAAAGTTCTTGCAAT+CGG | - | chr3_3:48604073-48604092 | None:intergenic | 25.0% |
| !!! | TTTAATTTTGAATGTTGGGT+AGG | - | chr3_3:48604287-48604306 | None:intergenic | 25.0% |
| !!! | AAAGCTCTTTAGGATTATTT+GGG | - | chr3_3:48605011-48605030 | None:intergenic | 25.0% |
| !!! | AAAAGCTCTTTAGGATTATT+TGG | - | chr3_3:48605012-48605031 | None:intergenic | 25.0% |
| !! | AAATAATCCTAAAGAGCTTT+TGG | + | chr3_3:48605011-48605030 | Msa0455600:CDS | 25.0% |
| ! | CTAGATATGTAAATCTCTTT+AGG | + | chr3_3:48605065-48605084 | Msa0455600:intron | 25.0% |
| ! | ACCTATAAAGATGGATATAA+AGG | + | chr3_3:48605121-48605140 | Msa0455600:intron | 25.0% |
| ! | ACCTTTATATCCATCTTTAT+AGG | - | chr3_3:48605125-48605144 | None:intergenic | 25.0% |
| !! | GCTCTTAGGTTAAAATATTT+TGG | + | chr3_3:48605147-48605166 | Msa0455600:intron | 25.0% |
| ! | TACATCATGCTACATTAATT+TGG | + | chr3_3:48605439-48605458 | Msa0455600:intron | 25.0% |
| !! | ATCATAAGGAATTTTCTCAA+TGG | + | chr3_3:48605631-48605650 | Msa0455600:CDS | 25.0% |
| !! | TCATAAGGAATTTTCTCAAT+GGG | + | chr3_3:48605632-48605651 | Msa0455600:CDS | 25.0% |
| !!! | ACATATTTTAAACTACGTGA+AGG | - | chr3_3:48605730-48605749 | None:intergenic | 25.0% |
| ! | GTAGGTATTTGGATAATTTA+AGG | - | chr3_3:48605807-48605826 | None:intergenic | 25.0% |
| ! | AATTATCCAAATACCTACAA+CGG | + | chr3_3:48605809-48605828 | Msa0455600:intron | 25.0% |
| ! | TTGAAGTTATGATGAAATTG+GGG | - | chr3_3:48605992-48606011 | None:intergenic | 25.0% |
| !!! | CTTTGAAGTTATGATGAAAT+TGG | - | chr3_3:48605994-48606013 | None:intergenic | 25.0% |
| ! | TTTAAATCCACGATCAATAT+AGG | - | chr3_3:48606070-48606089 | None:intergenic | 25.0% |
| !!! | AGGCATTGAAAAATTAAACT+TGG | - | chr3_3:48606104-48606123 | None:intergenic | 25.0% |
| ! | ATTAATTAACTTCACAGAAC+AGG | - | chr3_3:48606124-48606143 | None:intergenic | 25.0% |
| !! | CATTGTATACTTTCTTTTAG+GGG | - | chr3_3:48606176-48606195 | None:intergenic | 25.0% |
| ! | AAACAATTCTCAATCTCTAA+GGG | + | chr3_3:48606286-48606305 | Msa0455600:CDS | 25.0% |
| ! | ACTTAAAGTTTATTTGGACT+AGG | - | chr3_3:48606604-48606623 | None:intergenic | 25.0% |
| ! | GAAGCTTATATAATATGCAT+TGG | - | chr3_3:48606668-48606687 | None:intergenic | 25.0% |
| !!! | AAAAAAAGGTCATTTTCAGA+CGG | - | chr3_3:48606703-48606722 | None:intergenic | 25.0% |
| !!! | AAATGACCTTTTTTTAGTAG+TGG | + | chr3_3:48606708-48606727 | Msa0455600:intron | 25.0% |
| AGCTCAAGAATTAACAAAGA+TGG | + | chr3_3:48602531-48602550 | Msa0455600:exon | 30.0% | |
| GCTCAAGAATTAACAAAGAT+GGG | + | chr3_3:48602532-48602551 | Msa0455600:exon | 30.0% | |
| CTCAAGAATTAACAAAGATG+GGG | + | chr3_3:48602533-48602552 | Msa0455600:exon | 30.0% | |
| ! | TTCTCTTTCTCTTTGTTTGT+AGG | + | chr3_3:48602619-48602638 | Msa0455600:CDS | 30.0% |
| ! | GGTGAAAAGCATATATATGT+TGG | - | chr3_3:48603053-48603072 | None:intergenic | 30.0% |
| !!! | TGTCATTGTGCTTTTGATTT+AGG | - | chr3_3:48603160-48603179 | None:intergenic | 30.0% |
| AGAAGACATTTCAACTAAGT+TGG | + | chr3_3:48603192-48603211 | Msa0455600:intron | 30.0% | |
| GAAGACATTTCAACTAAGTT+GGG | + | chr3_3:48603193-48603212 | Msa0455600:intron | 30.0% | |
| ATAGTCTACATGTTTGATGT+TGG | - | chr3_3:48603397-48603416 | None:intergenic | 30.0% | |
| TTTGGTACTATATAACTTGG+GGG | - | chr3_3:48603439-48603458 | None:intergenic | 30.0% | |
| GTTTGGTACTATATAACTTG+GGG | - | chr3_3:48603440-48603459 | None:intergenic | 30.0% | |
| AGAAATGACCATGAAACTTA+CGG | - | chr3_3:48603533-48603552 | None:intergenic | 30.0% | |
| TAAGTTTCATGGTCATTTCT+AGG | + | chr3_3:48603533-48603552 | Msa0455600:intron | 30.0% | |
| !!! | GGTTTTGAGTTGTTTAATGT+TGG | - | chr3_3:48603564-48603583 | None:intergenic | 30.0% |
| AACAACTCAAAACCAATTGA+AGG | + | chr3_3:48603570-48603589 | Msa0455600:intron | 30.0% | |
| TACCGTATATGTTTCATAAC+AGG | - | chr3_3:48603721-48603740 | None:intergenic | 30.0% | |
| ! | CTATCTTTTATGAAACGAAC+TGG | + | chr3_3:48603742-48603761 | Msa0455600:intron | 30.0% |
| ! | TGATTGCTTTGATTTCTCAA+CGG | - | chr3_3:48603910-48603929 | None:intergenic | 30.0% |
| AACCTTGAGAAAAATGTAGA+TGG | - | chr3_3:48604210-48604229 | None:intergenic | 30.0% | |
| ! | TCTACATTTTTCTCAAGGTT+TGG | + | chr3_3:48604210-48604229 | Msa0455600:intron | 30.0% |
| ! | TTTTTCTCAAGGTTTGGATT+TGG | + | chr3_3:48604216-48604235 | Msa0455600:intron | 30.0% |
| ! | TTTTCTCAAGGTTTGGATTT+GGG | + | chr3_3:48604217-48604236 | Msa0455600:intron | 30.0% |
| ACCTCATTCATTTGAAAACT+AGG | + | chr3_3:48604543-48604562 | Msa0455600:intron | 30.0% | |
| !! | TCCTAGTTTTCAAATGAATG+AGG | - | chr3_3:48604547-48604566 | None:intergenic | 30.0% |
| ! | ATTATTGGTGGTTCAATATC+TGG | - | chr3_3:48604781-48604800 | None:intergenic | 30.0% |
| AGATATTGAACCACCAATAA+TGG | + | chr3_3:48604780-48604799 | Msa0455600:CDS | 30.0% | |
| ACTGTGTTAATCACCATTAT+TGG | - | chr3_3:48604796-48604815 | None:intergenic | 30.0% | |
| TAACACAGTATTATCTGTGA+TGG | + | chr3_3:48604807-48604826 | Msa0455600:CDS | 30.0% | |
| CTTCTAAATTTGCAAAGCAT+TGG | + | chr3_3:48604914-48604933 | Msa0455600:CDS | 30.0% | |
| !! | TGATTAGTTTGTTACCTTGA+TGG | - | chr3_3:48605037-48605056 | None:intergenic | 30.0% |
| CTCATATCAACCTATAAAGA+TGG | + | chr3_3:48605112-48605131 | Msa0455600:intron | 30.0% | |
| TTTGCGAGAATACTGAAAAA+TGG | + | chr3_3:48605485-48605504 | Msa0455600:intron | 30.0% | |
| ATAGAGAATGTACCAAGATA+TGG | + | chr3_3:48605551-48605570 | Msa0455600:intron | 30.0% | |
| ATACTTGAAGAATTGTGTCA+TGG | - | chr3_3:48605680-48605699 | None:intergenic | 30.0% | |
| ATAGATACTGCTTCATAGAA+AGG | + | chr3_3:48605901-48605920 | Msa0455600:intron | 30.0% | |
| TTTCATCATAACTTCAAAGC+TGG | + | chr3_3:48605995-48606014 | Msa0455600:CDS | 30.0% | |
| TGTCATCAATGATTAGCAAT+GGG | + | chr3_3:48606228-48606247 | Msa0455600:CDS | 30.0% | |
| CAAACAATTCTCAATCTCTA+AGG | + | chr3_3:48606285-48606304 | Msa0455600:CDS | 30.0% | |
| TTCTTCATGGATGAAGAAAA+GGG | + | chr3_3:48606320-48606339 | Msa0455600:CDS | 30.0% | |
| ACAAAAAATGACATATACGG+TGG | + | chr3_3:48606389-48606408 | Msa0455600:CDS | 30.0% | |
| ! | AAAGTTTATTTGGACTAGGA+GGG | - | chr3_3:48606600-48606619 | None:intergenic | 30.0% |
| ! | TAAAGTTTATTTGGACTAGG+AGG | - | chr3_3:48606601-48606620 | None:intergenic | 30.0% |
| !! | TCGTGATGGATTTGTATTTA+TGG | + | chr3_3:48606855-48606874 | Msa0455600:intron | 30.0% |
| !! | CGTGATGGATTTGTATTTAT+GGG | + | chr3_3:48606856-48606875 | Msa0455600:intron | 30.0% |
| CTTTGTTAATTCTTGAGCTG+TGG | - | chr3_3:48602530-48602549 | None:intergenic | 35.0% | |
| ! | TTTGAGACAAAGAGAGGTAA+GGG | + | chr3_3:48602577-48602596 | Msa0455600:CDS | 35.0% |
| ! | TTGTAGGAATTTGCTCCATT+TGG | + | chr3_3:48602635-48602654 | Msa0455600:CDS | 35.0% |
| ! | TGTAGGAATTTGCTCCATTT+GGG | + | chr3_3:48602636-48602655 | Msa0455600:CDS | 35.0% |
| ACTCAATCTGTAAACCCAAA+TGG | - | chr3_3:48602653-48602672 | None:intergenic | 35.0% | |
| AGTTACATACCCAAAGAAGA+TGG | + | chr3_3:48602670-48602689 | Msa0455600:CDS | 35.0% | |
| TACCCAAAGAAGATGGAAAA+TGG | + | chr3_3:48602677-48602696 | Msa0455600:CDS | 35.0% | |
| ACCCAAAGAAGATGGAAAAT+GGG | + | chr3_3:48602678-48602697 | Msa0455600:CDS | 35.0% | |
| ! | ACCCATTTTCCATCTTCTTT+GGG | - | chr3_3:48602682-48602701 | None:intergenic | 35.0% |
| ! | AACCCATTTTCCATCTTCTT+TGG | - | chr3_3:48602683-48602702 | None:intergenic | 35.0% |
| ! | AAGAAGATGGAAAATGGGTT+TGG | + | chr3_3:48602683-48602702 | Msa0455600:CDS | 35.0% |
| GAAAATAGGGTTCCATCTAA+GGG | - | chr3_3:48602764-48602783 | None:intergenic | 35.0% | |
| TGAAAATAGGGTTCCATCTA+AGG | - | chr3_3:48602765-48602784 | None:intergenic | 35.0% | |
| ! | TTAGATGGAACCCTATTTTC+AGG | + | chr3_3:48602764-48602783 | Msa0455600:CDS | 35.0% |
| CATGTATTACTGGTGTTTGT+CGG | - | chr3_3:48603074-48603093 | None:intergenic | 35.0% | |
| TTGTGTGGATTTACTGTGTT+AGG | - | chr3_3:48603295-48603314 | None:intergenic | 35.0% | |
| AAGTGTATGTCAACCCAATT+AGG | + | chr3_3:48603314-48603333 | Msa0455600:intron | 35.0% | |
| GTCAACCCAATTAGGTAATA+CGG | + | chr3_3:48603322-48603341 | Msa0455600:intron | 35.0% | |
| TCGTTCCGTATTACCTAATT+GGG | - | chr3_3:48603330-48603349 | None:intergenic | 35.0% | |
| TTCGTTCCGTATTACCTAAT+TGG | - | chr3_3:48603331-48603350 | None:intergenic | 35.0% | |
| !! | ACATTATGCCTGTTGATTCT+TGG | - | chr3_3:48603355-48603374 | None:intergenic | 35.0% |
| ATGTTTGATGTTGGACTGTT+TGG | - | chr3_3:48603388-48603407 | None:intergenic | 35.0% | |
| CAAACATGTAGACTATGATG+AGG | + | chr3_3:48603401-48603420 | Msa0455600:intron | 35.0% | |
| TATAGTACCAAACTTCGTGA+AGG | + | chr3_3:48603447-48603466 | Msa0455600:intron | 35.0% | |
| AACAACGGACAACAAGTTAA+TGG | + | chr3_3:48603676-48603695 | Msa0455600:intron | 35.0% | |
| ! | TGTTTCATAACAGGTTTGCT+AGG | - | chr3_3:48603712-48603731 | None:intergenic | 35.0% |
| AAAAACCATGTAAGGCTCTA+TGG | - | chr3_3:48603858-48603877 | None:intergenic | 35.0% | |
| TTCGGTTCAAAAACCATGTA+AGG | - | chr3_3:48603866-48603885 | None:intergenic | 35.0% | |
| !! | TTGGATTAGATCCGGTTTTT+CGG | - | chr3_3:48603936-48603955 | None:intergenic | 35.0% |
| !!! | CTTCAGTTTTGGATTAGATC+CGG | - | chr3_3:48603944-48603963 | None:intergenic | 35.0% |
| ACATGAGACAAAACGATGAA+CGG | + | chr3_3:48604026-48604045 | Msa0455600:intron | 35.0% | |
| AAAAATGTAGATGGTGAGAG+TGG | - | chr3_3:48604201-48604220 | None:intergenic | 35.0% | |
| ! | CACCATCTACATTTTTCTCA+AGG | + | chr3_3:48604205-48604224 | Msa0455600:intron | 35.0% |
| ! | ATTTTGAATGTTGGGTAGGT+GGG | - | chr3_3:48604283-48604302 | None:intergenic | 35.0% |
| ! | AATTTTGAATGTTGGGTAGG+TGG | - | chr3_3:48604284-48604303 | None:intergenic | 35.0% |
| ! | TTTAAACCTGAGTTGAAACC+AGG | + | chr3_3:48604424-48604443 | Msa0455600:intron | 35.0% |
| ! | TTAAACCTGAGTTGAAACCA+GGG | + | chr3_3:48604425-48604444 | Msa0455600:intron | 35.0% |
| CACACAAATATGTCCACTTT+GGG | - | chr3_3:48604748-48604767 | None:intergenic | 35.0% | |
| ACACACAAATATGTCCACTT+TGG | - | chr3_3:48604749-48604768 | None:intergenic | 35.0% | |
| AGTGGACATATTTGTGTGTA+CGG | + | chr3_3:48604750-48604769 | Msa0455600:CDS | 35.0% | |
| GTGTTAATCACCATTATTGG+TGG | - | chr3_3:48604793-48604812 | None:intergenic | 35.0% | |
| ACCTTGAATCTCTTGCAAAA+TGG | - | chr3_3:48604943-48604962 | None:intergenic | 35.0% | |
| ACAGTCTTGAAATATGCACT+TGG | - | chr3_3:48604979-48604998 | None:intergenic | 35.0% | |
| TTGAAGGAGTTGCCAAATTA+AGG | - | chr3_3:48605380-48605399 | None:intergenic | 35.0% | |
| AGTAGAAAATGCATCCAAGT+TGG | + | chr3_3:48605581-48605600 | Msa0455600:CDS | 35.0% | |
| GTAGAAAATGCATCCAAGTT+GGG | + | chr3_3:48605582-48605601 | Msa0455600:CDS | 35.0% | |
| TGATTTGAGTATGCTTCCTT+CGG | - | chr3_3:48605615-48605634 | None:intergenic | 35.0% | |
| ! | GGAAGCATACTCAAATCATA+AGG | + | chr3_3:48605617-48605636 | Msa0455600:CDS | 35.0% |
| CTACGTGAAGGAAATTCAAT+CGG | - | chr3_3:48605718-48605737 | None:intergenic | 35.0% | |
| TAACTACCGTTGTAGGTATT+TGG | - | chr3_3:48605818-48605837 | None:intergenic | 35.0% | |
| GTGTCATCAATGATTAGCAA+TGG | + | chr3_3:48606227-48606246 | Msa0455600:CDS | 35.0% | |
| CTTCTTCATGGATGAAGAAA+AGG | + | chr3_3:48606319-48606338 | Msa0455600:CDS | 35.0% | |
| ! | GTGATATTTTCAAAGACCTG+AGG | - | chr3_3:48606371-48606390 | None:intergenic | 35.0% |
| TTCTTTGGCTATAGCTTATG+AGG | + | chr3_3:48606412-48606431 | Msa0455600:CDS | 35.0% | |
| ! | AAGTTTATTTGGACTAGGAG+GGG | - | chr3_3:48606599-48606618 | None:intergenic | 35.0% |
| TTTCAGACGGAATATTCAGA+CGG | - | chr3_3:48606690-48606709 | None:intergenic | 35.0% | |
| CCTCAACCACTACTAAAAAA+AGG | - | chr3_3:48606717-48606736 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTAGTAGTGGTTG+AGG | + | chr3_3:48606714-48606733 | Msa0455600:intron | 35.0% |
| ! | TTCTGTTCTTGATCTGAGAT+TGG | + | chr3_3:48606909-48606928 | Msa0455600:CDS | 35.0% |
| CCTCTCTTTGTCTCAAACAA+TGG | - | chr3_3:48602574-48602593 | None:intergenic | 40.0% | |
| ! | CCATTGTTTGAGACAAAGAG+AGG | + | chr3_3:48602571-48602590 | Msa0455600:CDS | 40.0% |
| ! | GTTTGAGACAAAGAGAGGTA+AGG | + | chr3_3:48602576-48602595 | Msa0455600:CDS | 40.0% |
| ! | GATGGAAAATGGGTTTGGAT+TGG | + | chr3_3:48602688-48602707 | Msa0455600:CDS | 40.0% |
| GATTGCTTTGTGCTGAACTA+TGG | + | chr3_3:48602710-48602729 | Msa0455600:CDS | 40.0% | |
| CTTTGTGCTGAACTATGGTT+TGG | + | chr3_3:48602715-48602734 | Msa0455600:CDS | 40.0% | |
| ! | ACCTTTGAGAGAGTCTTTGT+GGG | - | chr3_3:48602798-48602817 | None:intergenic | 40.0% |
| ! | TACCTTTGAGAGAGTCTTTG+TGG | - | chr3_3:48602799-48602818 | None:intergenic | 40.0% |
| GAACGAATCCAAGAATCAAC+AGG | + | chr3_3:48603344-48603363 | Msa0455600:intron | 40.0% | |
| ! | GAAACCATAACTAAAGGTGC+AGG | + | chr3_3:48603776-48603795 | Msa0455600:intron | 40.0% |
| ! | GGTTTTTGAACCGAACTAGA+CGG | + | chr3_3:48603871-48603890 | Msa0455600:intron | 40.0% |
| ! | TTGCTTTGATTTCTCAACGG+CGG | - | chr3_3:48603907-48603926 | None:intergenic | 40.0% |
| AGCAATCAAACCCGAAAAAC+CGG | + | chr3_3:48603922-48603941 | Msa0455600:intron | 40.0% | |
| !! | TGGATTAGATCCGGTTTTTC+GGG | - | chr3_3:48603935-48603954 | None:intergenic | 40.0% |
| TCATGTGTGAAGGTTTCATC+GGG | - | chr3_3:48604012-48604031 | None:intergenic | 40.0% | |
| CTCATGTGTGAAGGTTTCAT+CGG | - | chr3_3:48604013-48604032 | None:intergenic | 40.0% | |
| ! | TCGTTTTGTCTCATGTGTGA+AGG | - | chr3_3:48604022-48604041 | None:intergenic | 40.0% |
| TTAAAAAAACCGGCCCTAAC+TGG | + | chr3_3:48604089-48604108 | Msa0455600:intron | 40.0% | |
| TAAAAAAACCGGCCCTAACT+GGG | + | chr3_3:48604090-48604109 | Msa0455600:intron | 40.0% | |
| TTTGGAAAGACACCCAGTTA+GGG | - | chr3_3:48604105-48604124 | None:intergenic | 40.0% | |
| !! | TTTTGGAAAGACACCCAGTT+AGG | - | chr3_3:48604106-48604125 | None:intergenic | 40.0% |
| ! | TAGATTGAGTCAGTGGCTTT+TGG | - | chr3_3:48604123-48604142 | None:intergenic | 40.0% |
| CTGTCACTGTTTCAAAACTC+TGG | - | chr3_3:48604146-48604165 | None:intergenic | 40.0% | |
| !!! | GAGTTTTGAAACAGTGACAG+TGG | + | chr3_3:48604146-48604165 | Msa0455600:intron | 40.0% |
| GGCAAGTCGATTGGAAATTT+GGG | + | chr3_3:48604391-48604410 | Msa0455600:intron | 40.0% | |
| ! | TAAACCTGAGTTGAAACCAG+GGG | + | chr3_3:48604426-48604445 | Msa0455600:intron | 40.0% |
| TACACACTAAGCTTCTCTGT+TGG | - | chr3_3:48604844-48604863 | None:intergenic | 40.0% | |
| GTGTATCTTTCAGATGATGC+TGG | + | chr3_3:48604859-48604878 | Msa0455600:CDS | 40.0% | |
| !! | GCCATTTTGCAAGAGATTCA+AGG | + | chr3_3:48604939-48604958 | Msa0455600:CDS | 40.0% |
| AGAGATTCAAGGTTGAACCT+AGG | + | chr3_3:48604950-48604969 | Msa0455600:CDS | 40.0% | |
| ! | TTGATGGCCAAAAGCTCTTT+AGG | - | chr3_3:48605021-48605040 | None:intergenic | 40.0% |
| ! | TAAAGAGCTTTTGGCCATCA+AGG | + | chr3_3:48605020-48605039 | Msa0455600:CDS | 40.0% |
| GGATATAAAGGTGAGCTCTT+AGG | + | chr3_3:48605133-48605152 | Msa0455600:intron | 40.0% | |
| TGTACTACACTCAACCCTAT+TGG | - | chr3_3:48605275-48605294 | None:intergenic | 40.0% | |
| ATAGGGTTGAGTGTAGTACA+AGG | + | chr3_3:48605275-48605294 | Msa0455600:intron | 40.0% | |
| TAGGGTTGAGTGTAGTACAA+GGG | + | chr3_3:48605276-48605295 | Msa0455600:intron | 40.0% | |
| ATGGTCGAATCGAATTAGAG+AGG | + | chr3_3:48605319-48605338 | Msa0455600:intron | 40.0% | |
| CGAATCGAATTAGAGAGGAA+AGG | + | chr3_3:48605324-48605343 | Msa0455600:intron | 40.0% | |
| AGTTGCCAAATTAAGGAGGT+GGG | - | chr3_3:48605373-48605392 | None:intergenic | 40.0% | |
| AAGGAGTTGCCAAATTAAGG+AGG | - | chr3_3:48605377-48605396 | None:intergenic | 40.0% | |
| CTACTCGACTTTCCATATCT+TGG | - | chr3_3:48605566-48605585 | None:intergenic | 40.0% | |
| CGACAATTAACTACCGTTGT+AGG | - | chr3_3:48605825-48605844 | None:intergenic | 40.0% | |
| GACAATGCTAGAGATGAAGA+TGG | + | chr3_3:48605923-48605942 | Msa0455600:CDS | 40.0% | |
| TATGCCCACCTTGGTATATT+TGG | + | chr3_3:48605952-48605971 | Msa0455600:CDS | 40.0% | |
| AGCTGGAGCTATGAATTCAT+TGG | + | chr3_3:48606012-48606031 | Msa0455600:CDS | 40.0% | |
| CACTAAGCCTATATTGATCG+TGG | + | chr3_3:48606060-48606079 | Msa0455600:intron | 40.0% | |
| TTGGTCCTCAATGCAGATAA+GGG | + | chr3_3:48606205-48606224 | Msa0455600:intron | 40.0% | |
| ACATGAAATTGCCTTTGTGC+AGG | + | chr3_3:48606343-48606362 | Msa0455600:CDS | 40.0% | |
| TGACATATACGGTGGTTCTT+TGG | + | chr3_3:48606397-48606416 | Msa0455600:CDS | 40.0% | |
| TGGAGGAAGTTTATAGACAG+AGG | - | chr3_3:48606558-48606577 | None:intergenic | 40.0% | |
| ! | AGTTTATTTGGACTAGGAGG+GGG | - | chr3_3:48606598-48606617 | None:intergenic | 40.0% |
| ! | TGAGCTTAGCTCAGTTGATA+GGG | + | chr3_3:48606642-48606661 | Msa0455600:intron | 40.0% |
| !! | TTGTTTTGCTCGTGATCTAG+CGG | + | chr3_3:48606760-48606779 | Msa0455600:intron | 40.0% |
| !! | TTTCTTTTTGGTGTGGTCGA+TGG | + | chr3_3:48606801-48606820 | Msa0455600:intron | 40.0% |
| GGAAGGGTTGCCTGAAAATA+GGG | - | chr3_3:48602777-48602796 | None:intergenic | 45.0% | |
| TGAGAGAGTCTTTGTGGGAA+GGG | - | chr3_3:48602793-48602812 | None:intergenic | 45.0% | |
| TTGAGAGAGTCTTTGTGGGA+AGG | - | chr3_3:48602794-48602813 | None:intergenic | 45.0% | |
| TCCCACAAAGACTCTCTCAA+AGG | + | chr3_3:48602794-48602813 | Msa0455600:CDS | 45.0% | |
| GGGTTGACATACACTTTGTG+TGG | - | chr3_3:48603310-48603329 | None:intergenic | 45.0% | |
| GGTACTATATAACTTGGGGG+AGG | - | chr3_3:48603436-48603455 | None:intergenic | 45.0% | |
| TCTCTCACCTTCACGAAGTT+TGG | - | chr3_3:48603457-48603476 | None:intergenic | 45.0% | |
| TTGAGGTTCTGTATCCGTGT+TGG | - | chr3_3:48603490-48603509 | None:intergenic | 45.0% | |
| ACCAATTGAAGGCCATATCG+AGG | + | chr3_3:48603581-48603600 | Msa0455600:intron | 45.0% | |
| CCAATTGAAGGCCATATCGA+GGG | + | chr3_3:48603582-48603601 | Msa0455600:intron | 45.0% | |
| TGATTGACCATCCCTCGATA+TGG | - | chr3_3:48603596-48603615 | None:intergenic | 45.0% | |
| !! | ACTTGTTGTCCGTTGTTGCT+GGG | - | chr3_3:48603673-48603692 | None:intergenic | 45.0% |
| !! | AACTTGTTGTCCGTTGTTGC+TGG | - | chr3_3:48603674-48603693 | None:intergenic | 45.0% |
| !! | CAGGTTTGCTAGGCTAGAAA+TGG | - | chr3_3:48603702-48603721 | None:intergenic | 45.0% |
| CGTTCCTGCACCTTTAGTTA+TGG | - | chr3_3:48603783-48603802 | None:intergenic | 45.0% | |
| GGTTCTGCTAAAACCTGCAA+GGG | - | chr3_3:48603837-48603856 | None:intergenic | 45.0% | |
| ! | TGGTTCTGCTAAAACCTGCA+AGG | - | chr3_3:48603838-48603857 | None:intergenic | 45.0% |
| CAGAACCATAGAGCCTTACA+TGG | + | chr3_3:48603850-48603869 | Msa0455600:intron | 45.0% | |
| ! | TTTTGAACCGAACTAGACGG+TGG | + | chr3_3:48603874-48603893 | Msa0455600:intron | 45.0% |
| !! | TTTGGCTTCGGCTTCAGTTT+TGG | - | chr3_3:48603955-48603974 | None:intergenic | 45.0% |
| TGTAAGCAAGCTCCAGTTGT+TGG | - | chr3_3:48603979-48603998 | None:intergenic | 45.0% | |
| ACTCTGGTAGATTGAGTCAG+TGG | - | chr3_3:48604130-48604149 | None:intergenic | 45.0% | |
| TTGAAACAGTGACAGTGGTG+CGG | + | chr3_3:48604151-48604170 | Msa0455600:intron | 45.0% | |
| TCTCAAGGTTTGGATTTGGG+TGG | + | chr3_3:48604220-48604239 | Msa0455600:intron | 45.0% | |
| CTCAAGGTTTGGATTTGGGT+GGG | + | chr3_3:48604221-48604240 | Msa0455600:intron | 45.0% | |
| TTGGATTTGGGTGGGAAAAG+AGG | + | chr3_3:48604229-48604248 | Msa0455600:intron | 45.0% | |
| TGGATTTGGGTGGGAAAAGA+GGG | + | chr3_3:48604230-48604249 | Msa0455600:intron | 45.0% | |
| !! | TTGGGTAGGTGGGTTTTTGT+TGG | - | chr3_3:48604273-48604292 | None:intergenic | 45.0% |
| ACTGTAAAGGGCAAGTCGAT+TGG | + | chr3_3:48604382-48604401 | Msa0455600:intron | 45.0% | |
| GGGCAAGTCGATTGGAAATT+TGG | + | chr3_3:48604390-48604409 | Msa0455600:intron | 45.0% | |
| TGAGAACATGCTACCCAAAG+TGG | + | chr3_3:48604732-48604751 | Msa0455600:CDS | 45.0% | |
| AAATATGCACTTGGCGACCT+AGG | - | chr3_3:48604970-48604989 | None:intergenic | 45.0% | |
| AGGGTTGAGTGTAGTACAAG+GGG | + | chr3_3:48605277-48605296 | Msa0455600:intron | 45.0% | |
| ! | CTAGAGTGCCACAACATCAA+TGG | + | chr3_3:48605300-48605319 | Msa0455600:intron | 45.0% |
| CGATTCGACCATTGATGTTG+TGG | - | chr3_3:48605311-48605330 | None:intergenic | 45.0% | |
| TGGGTCAGATACTAAATGCG+GGG | - | chr3_3:48605354-48605373 | None:intergenic | 45.0% | |
| GTGGGTCAGATACTAAATGC+GGG | - | chr3_3:48605355-48605374 | None:intergenic | 45.0% | |
| GGTGGGTCAGATACTAAATG+CGG | - | chr3_3:48605356-48605375 | None:intergenic | 45.0% | |
| TCTGACCCACCTCCTTAATT+TGG | + | chr3_3:48605365-48605384 | Msa0455600:intron | 45.0% | |
| GAGTTGCCAAATTAAGGAGG+TGG | - | chr3_3:48605374-48605393 | None:intergenic | 45.0% | |
| !!! | TGGTTTTGTTATGCCCACCT+TGG | + | chr3_3:48605943-48605962 | Msa0455600:CDS | 45.0% |
| CGAGCCAAATATACCAAGGT+GGG | - | chr3_3:48605959-48605978 | None:intergenic | 45.0% | |
| ACGAGCCAAATATACCAAGG+TGG | - | chr3_3:48605960-48605979 | None:intergenic | 45.0% | |
| CTCACGAGCCAAATATACCA+AGG | - | chr3_3:48605963-48605982 | None:intergenic | 45.0% | |
| GTTGGTCCTCAATGCAGATA+AGG | + | chr3_3:48606204-48606223 | Msa0455600:intron | 45.0% | |
| TGACACCCTTATCTGCATTG+AGG | - | chr3_3:48606213-48606232 | None:intergenic | 45.0% | |
| GGATGCACTTTGCTTCTTCA+TGG | + | chr3_3:48606307-48606326 | Msa0455600:CDS | 45.0% | |
| GTGAGCTTAGCTCAGTTGAT+AGG | + | chr3_3:48606641-48606660 | Msa0455600:intron | 45.0% | |
| TCACGAGCAAAACAACCAGA+GGG | - | chr3_3:48606755-48606774 | None:intergenic | 45.0% | |
| ATCACGAGCAAAACAACCAG+AGG | - | chr3_3:48606756-48606775 | None:intergenic | 45.0% | |
| ACAAATCCATCACGACAGTG+AGG | - | chr3_3:48606850-48606869 | None:intergenic | 45.0% | |
| TTTATGGGCTTGCGACAGTT+TGG | + | chr3_3:48606871-48606890 | Msa0455600:intron | 45.0% | |
| !! | AAAATTATTAATTCATTAAA+AGG | + | chr3_3:48604500-48604519 | Msa0455600:intron | 5.0% |
| !!! | TTTATTTTTTATTTTCTTTT+TGG | + | chr3_3:48606789-48606808 | Msa0455600:intron | 5.0% |
| TAGGGTTCCATCTAAGGGCT+TGG | - | chr3_3:48602759-48602778 | None:intergenic | 50.0% | |
| GGGAAGGGTTGCCTGAAAAT+AGG | - | chr3_3:48602778-48602797 | None:intergenic | 50.0% | |
| GAGAGATTTGACCGCCAACA+CGG | + | chr3_3:48603473-48603492 | Msa0455600:intron | 50.0% | |
| AGGTTCTGTATCCGTGTTGG+CGG | - | chr3_3:48603487-48603506 | None:intergenic | 50.0% | |
| !! | CAGCATAGTGGGTTGTGTTG+AGG | - | chr3_3:48603507-48603526 | None:intergenic | 50.0% |
| ACTTACGGTCGCAGCATAGT+GGG | - | chr3_3:48603518-48603537 | None:intergenic | 50.0% | |
| AACTTACGGTCGCAGCATAG+TGG | - | chr3_3:48603519-48603538 | None:intergenic | 50.0% | |
| TGCTGCGACCGTAAGTTTCA+TGG | + | chr3_3:48603522-48603541 | Msa0455600:intron | 50.0% | |
| CCCTCGATATGGCCTTCAAT+TGG | - | chr3_3:48603585-48603604 | None:intergenic | 50.0% | |
| TTGAAGGCCATATCGAGGGA+TGG | + | chr3_3:48603586-48603605 | Msa0455600:intron | 50.0% | |
| TAAAACCTGCAAGGGTCGGT+TGG | - | chr3_3:48603829-48603848 | None:intergenic | 50.0% | |
| CTGCTAAAACCTGCAAGGGT+CGG | - | chr3_3:48603833-48603852 | None:intergenic | 50.0% | |
| ! | CTTTGATTTCTCAACGGCGG+TGG | - | chr3_3:48603904-48603923 | None:intergenic | 50.0% |
| !! | CCAGTTGTTGGCTTTGGCTT+CGG | - | chr3_3:48603967-48603986 | None:intergenic | 50.0% |
| !! | CAAGCTCCAGTTGTTGGCTT+TGG | - | chr3_3:48603973-48603992 | None:intergenic | 50.0% |
| ATTTGGGTGGGAAAAGAGGG+TGG | + | chr3_3:48604233-48604252 | Msa0455600:intron | 50.0% | |
| ATCAATCATTTCGCCACCCC+TGG | - | chr3_3:48604445-48604464 | None:intergenic | 50.0% | |
| TTTGCGGCATAGCAGCCAAT+AGG | + | chr3_3:48605257-48605276 | Msa0455600:intron | 50.0% | |
| TTGCGGCATAGCAGCCAATA+GGG | + | chr3_3:48605258-48605277 | Msa0455600:intron | 50.0% | |
| CTTCGGTACTTCACCCAACT+TGG | - | chr3_3:48605598-48605617 | None:intergenic | 50.0% | |
| !! | CAAGTTGGGTGAAGTACCGA+AGG | + | chr3_3:48605596-48605615 | Msa0455600:CDS | 50.0% |
| !! | TGTTTTTGTTAGCCGCCCTC+TGG | + | chr3_3:48606737-48606756 | Msa0455600:intron | 50.0% |
| !! | CTTTTTGGTGTGGTCGATGG+TGG | + | chr3_3:48606804-48606823 | Msa0455600:intron | 50.0% |
| ! | TCGATGGTGGTGTATGTGTG+TGG | + | chr3_3:48606817-48606836 | Msa0455600:intron | 50.0% |
| CATCACGACAGTGAGGAAAG+TGG | - | chr3_3:48606843-48606862 | None:intergenic | 50.0% | |
| CACTTTCCTCACTGTCGTGA+TGG | + | chr3_3:48606841-48606860 | Msa0455600:intron | 50.0% | |
| TCCTTCGCCAAGCCCTTAGA+TGG | + | chr3_3:48602749-48602768 | Msa0455600:CDS | 55.0% | |
| TCCATCTAAGGGCTTGGCGA+AGG | - | chr3_3:48602753-48602772 | None:intergenic | 55.0% | |
| TTCGGCTGTTACCGTGTTGG+CGG | - | chr3_3:48603641-48603660 | None:intergenic | 55.0% | |
| TTGTCCGTTGTTGCTGGGAG+TGG | - | chr3_3:48603668-48603687 | None:intergenic | 55.0% | |
| !! | AAGGGTCGGTTGGTTTCGCT+TGG | - | chr3_3:48603819-48603838 | None:intergenic | 55.0% |
| TGGCAAGCCACCGTCTAGTT+CGG | - | chr3_3:48603884-48603903 | None:intergenic | 55.0% | |
| CCGAAGCCAAAGCCAACAAC+TGG | + | chr3_3:48603964-48603983 | Msa0455600:intron | 55.0% | |
| TCTTGCAATCGGCGTCTACG+CGG | - | chr3_3:48604062-48604081 | None:intergenic | 55.0% | |
| GAAAGACACCCAGTTAGGGC+CGG | - | chr3_3:48604101-48604120 | None:intergenic | 55.0% | |
| AAACAGTGACAGTGGTGCGG+AGG | + | chr3_3:48604154-48604173 | Msa0455600:intron | 55.0% | |
| TGACAGTGGTGCGGAGGAAA+GGG | + | chr3_3:48604160-48604179 | Msa0455600:intron | 55.0% | |
| !! | TGAGAGTGGTGTTGCGACGA+GGG | - | chr3_3:48604187-48604206 | None:intergenic | 55.0% |
| ! | ACCTGAGTTGAAACCAGGGG+TGG | + | chr3_3:48604429-48604448 | Msa0455600:intron | 55.0% |
| ! | AGAAGAAGGTGGTGGCTTGG+AGG | - | chr3_3:48606575-48606594 | None:intergenic | 55.0% |
| CGAGCAAAACAACCAGAGGG+CGG | - | chr3_3:48606752-48606771 | None:intergenic | 55.0% | |
| ! | AGCCACAAGCACCGCCAACA+CGG | + | chr3_3:48603627-48603646 | Msa0455600:intron | 60.0% |
| ! | TACCGTGTTGGCGGTGCTTG+TGG | - | chr3_3:48603632-48603651 | None:intergenic | 60.0% |
| GGGTTCGGCTGTTACCGTGT+TGG | - | chr3_3:48603644-48603663 | None:intergenic | 60.0% | |
| !! | GTTGCTGGGAGTGGTGGGTT+CGG | - | chr3_3:48603659-48603678 | None:intergenic | 60.0% |
| CCGTTGTTGCTGGGAGTGGT+GGG | - | chr3_3:48603664-48603683 | None:intergenic | 60.0% | |
| CCCACCACTCCCAGCAACAA+CGG | + | chr3_3:48603661-48603680 | Msa0455600:intron | 60.0% | |
| TCCGTTGTTGCTGGGAGTGG+TGG | - | chr3_3:48603665-48603684 | None:intergenic | 60.0% | |
| CGAAACCAACCGACCCTTGC+AGG | + | chr3_3:48603821-48603840 | Msa0455600:intron | 60.0% | |
| GTGACAGTGGTGCGGAGGAA+AGG | + | chr3_3:48604159-48604178 | Msa0455600:intron | 60.0% | |
| !! | GTGAGAGTGGTGTTGCGACG+AGG | - | chr3_3:48604188-48604207 | None:intergenic | 60.0% |
| TGGGTGGGAAAAGAGGGTGG+AGG | + | chr3_3:48604236-48604255 | Msa0455600:intron | 60.0% | |
| GCCACCCCTGGTTTCAACTC+AGG | - | chr3_3:48604433-48604452 | None:intergenic | 60.0% | |
| TGCCTTTGTGCAGGCTCCTC+AGG | + | chr3_3:48606352-48606371 | Msa0455600:CDS | 60.0% | |
| GACCTGAGGAGCCTGCACAA+AGG | - | chr3_3:48606357-48606376 | None:intergenic | 60.0% | |
| ! | GGGAGAAGAAGGTGGTGGCT+TGG | - | chr3_3:48606578-48606597 | None:intergenic | 60.0% |
| CTAGGAGGGGGAGAAGAAGG+TGG | - | chr3_3:48606586-48606605 | None:intergenic | 60.0% | |
| GGACTAGGAGGGGGAGAAGA+AGG | - | chr3_3:48606589-48606608 | None:intergenic | 60.0% | |
| TGGCGGTGCTTGTGGCTCTC+AGG | - | chr3_3:48603624-48603643 | None:intergenic | 65.0% | |
| GGAGGGGGAGAAGAAGGTGG+TGG | - | chr3_3:48606583-48606602 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 48602502 | 48606939 | 48602502 | ID=Msa0455600;Name=Msa0455600 |
| chr3_3 | mRNA | 48602502 | 48606939 | 48602502 | ID=Msa0455600-mRNA-1;Parent=Msa0455600;Name=Msa0455600-mRNA-1;_AED=0.43;_eAED=0.43;_QI=48|0.8|0.83|0.83|0.8|0.83|6|0|370 |
| chr3_3 | exon | 48602502 | 48602815 | 48602502 | ID=Msa0455600-mRNA-1:exon:9076;Parent=Msa0455600-mRNA-1 |
| chr3_3 | exon | 48604729 | 48605041 | 48604729 | ID=Msa0455600-mRNA-1:exon:9077;Parent=Msa0455600-mRNA-1 |
| chr3_3 | exon | 48605555 | 48605695 | 48605555 | ID=Msa0455600-mRNA-1:exon:9078;Parent=Msa0455600-mRNA-1 |
| chr3_3 | exon | 48605905 | 48606033 | 48605905 | ID=Msa0455600-mRNA-1:exon:9079;Parent=Msa0455600-mRNA-1 |
| chr3_3 | exon | 48606221 | 48606433 | 48606221 | ID=Msa0455600-mRNA-1:exon:9080;Parent=Msa0455600-mRNA-1 |
| chr3_3 | exon | 48606889 | 48606939 | 48606889 | ID=Msa0455600-mRNA-1:exon:9081;Parent=Msa0455600-mRNA-1 |
| chr3_3 | five_prime_UTR | 48602502 | 48602549 | 48602502 | ID=Msa0455600-mRNA-1:five_prime_utr;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48602550 | 48602815 | 48602550 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48604729 | 48605041 | 48604729 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48605555 | 48605695 | 48605555 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48605905 | 48606033 | 48605905 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48606221 | 48606433 | 48606221 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| chr3_3 | CDS | 48606889 | 48606939 | 48606889 | ID=Msa0455600-mRNA-1:cds;Parent=Msa0455600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
