Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0782090 | G7KHA8 | 81.652 | 1259 | 119 | 9 | 1 | 1183 | 667 | 1889 | 0.0 | 2004 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006700 | Msa0782090 | 0.801274 | 9.726375e-49 | -8.615850e-47 |
Msa0014790 | Msa0782090 | 0.833879 | 4.138690e-56 | -8.615850e-47 |
Msa0026120 | Msa0782090 | 0.837206 | 5.960639e-57 | -8.615850e-47 |
Msa0036150 | Msa0782090 | 0.804673 | 1.929822e-49 | -8.615850e-47 |
Msa0050240 | Msa0782090 | 0.801747 | 7.780291e-49 | -8.615850e-47 |
Msa0053960 | Msa0782090 | 0.813923 | 2.001924e-51 | -8.615850e-47 |
Msa0056550 | Msa0782090 | 0.811379 | 7.210581e-51 | -8.615850e-47 |
Msa0067580 | Msa0782090 | 0.817515 | 3.168890e-52 | -8.615850e-47 |
Msa0070090 | Msa0782090 | 0.806552 | 7.782837e-50 | -8.615850e-47 |
Msa0088550 | Msa0782090 | 0.815520 | 8.862286e-52 | -8.615850e-47 |
Msa0089010 | Msa0782090 | 0.805599 | 1.234978e-49 | -8.615850e-47 |
Msa0093440 | Msa0782090 | 0.800005 | 1.765189e-48 | -8.615850e-47 |
Msa0101650 | Msa0782090 | 0.811460 | 6.922728e-51 | -8.615850e-47 |
Msa0112800 | Msa0782090 | 0.819055 | 1.419570e-52 | -8.615850e-47 |
Msa0607400 | Msa0782090 | 0.802115 | 6.537648e-49 | -8.615850e-47 |
Msa0607440 | Msa0782090 | 0.801256 | 9.811763e-49 | -8.615850e-47 |
Msa0622690 | Msa0782090 | 0.806370 | 8.502601e-50 | -8.615850e-47 |
Msa0629960 | Msa0782090 | 0.818789 | 1.631455e-52 | -8.615850e-47 |
Msa0630060 | Msa0782090 | 0.841354 | 5.000252e-58 | -8.615850e-47 |
Msa0632560 | Msa0782090 | 0.807810 | 4.214565e-50 | -8.615850e-47 |
Msa0639880 | Msa0782090 | 0.832544 | 8.899599e-56 | -8.615850e-47 |
Msa0641020 | Msa0782090 | 0.830415 | 2.974757e-55 | -8.615850e-47 |
Msa0641030 | Msa0782090 | 0.805943 | 1.045569e-49 | -8.615850e-47 |
Msa0645460 | Msa0782090 | 0.806041 | 9.970299e-50 | -8.615850e-47 |
Msa0648300 | Msa0782090 | 0.807738 | 4.365197e-50 | -8.615850e-47 |
Msa0660880 | Msa0782090 | -0.810289 | 1.241465e-50 | -8.615850e-47 |
Msa0672810 | Msa0782090 | 0.801370 | 9.295984e-49 | -8.615850e-47 |
Msa0672850 | Msa0782090 | 0.802582 | 5.240429e-49 | -8.615850e-47 |
Msa0678240 | Msa0782090 | 0.846982 | 1.542790e-59 | -8.615850e-47 |
Msa0691190 | Msa0782090 | 0.801009 | 1.102012e-48 | -8.615850e-47 |
Msa0692000 | Msa0782090 | 0.822668 | 2.094502e-53 | -8.615850e-47 |
Msa0709820 | Msa0782090 | -0.815639 | 8.341415e-52 | -8.615850e-47 |
Msa0712440 | Msa0782090 | 0.800180 | 1.626178e-48 | -8.615850e-47 |
Msa0716740 | Msa0782090 | -0.801518 | 8.670166e-49 | -8.615850e-47 |
Msa0718920 | Msa0782090 | 0.825247 | 5.200672e-54 | -8.615850e-47 |
Msa0722930 | Msa0782090 | 0.803275 | 3.767377e-49 | -8.615850e-47 |
Msa0723140 | Msa0782090 | 0.801288 | 9.665284e-49 | -8.615850e-47 |
Msa0729920 | Msa0782090 | 0.813594 | 2.365168e-51 | -8.615850e-47 |
Msa0739390 | Msa0782090 | 0.892737 | 1.204252e-74 | -8.615850e-47 |
Msa0749900 | Msa0782090 | 0.820846 | 5.528162e-53 | -8.615850e-47 |
Msa0752580 | Msa0782090 | 0.848039 | 7.902643e-60 | -8.615850e-47 |
Msa0754500 | Msa0782090 | 0.838752 | 2.385508e-57 | -8.615850e-47 |
Msa0756410 | Msa0782090 | 0.800771 | 1.232682e-48 | -8.615850e-47 |
Msa0756480 | Msa0782090 | 0.806779 | 6.968894e-50 | -8.615850e-47 |
Msa0763280 | Msa0782090 | 0.807102 | 5.955881e-50 | -8.615850e-47 |
Msa0770890 | Msa0782090 | 0.824511 | 7.757934e-54 | -8.615850e-47 |
Msa0782080 | Msa0782090 | 0.810071 | 1.382871e-50 | -8.615850e-47 |
Msa0782090 | Msa0799290 | -0.816860 | 4.446680e-52 | -8.615850e-47 |
Msa0782090 | Msa0811000 | 0.839879 | 1.216892e-57 | -8.615850e-47 |
Msa0782090 | Msa0813030 | 0.814464 | 1.520196e-51 | -8.615850e-47 |
Msa0782090 | Msa0815380 | 0.810684 | 1.019984e-50 | -8.615850e-47 |
Msa0782090 | Msa0819740 | 0.935007 | 1.667338e-96 | -8.615850e-47 |
Msa0782090 | Msa0829430 | 0.803324 | 3.681022e-49 | -8.615850e-47 |
Msa0782090 | Msa0830120 | 0.821839 | 3.261651e-53 | -8.615850e-47 |
Msa0782090 | Msa0830450 | 0.819983 | 8.718795e-53 | -8.615850e-47 |
Msa0782090 | Msa0830900 | 0.830065 | 3.621639e-55 | -8.615850e-47 |
Msa0782090 | Msa0837510 | -0.816947 | 4.251087e-52 | -8.615850e-47 |
Msa0782090 | Msa0839730 | 0.807752 | 4.336216e-50 | -8.615850e-47 |
Msa0782090 | Msa0853500 | 0.817104 | 3.921312e-52 | -8.615850e-47 |
Msa0782090 | Msa0860060 | 0.828894 | 6.975596e-55 | -8.615850e-47 |
Msa0782090 | Msa0862020 | 0.833633 | 4.767034e-56 | -8.615850e-47 |
Msa0782090 | Msa0867810 | 0.823451 | 1.375569e-53 | -8.615850e-47 |
Msa0782090 | Msa0883350 | 0.816260 | 6.061959e-52 | -8.615850e-47 |
Msa0782090 | Msa0883390 | 0.821748 | 3.424405e-53 | -8.615850e-47 |
Msa0782090 | Msa0883410 | 0.828112 | 1.077327e-54 | -8.615850e-47 |
Msa0782090 | Msa0883660 | 0.847885 | 8.712050e-60 | -8.615850e-47 |
Msa0782090 | Msa0883670 | 0.817577 | 3.068929e-52 | -8.615850e-47 |
Msa0782090 | Msa0883700 | 0.800567 | 1.356433e-48 | -8.615850e-47 |
Msa0782090 | Msa0886660 | 0.801585 | 8.401615e-49 | -8.615850e-47 |
Msa0782090 | Msa0887000 | 0.826176 | 3.131532e-54 | -8.615850e-47 |
Msa0782090 | Msa0892540 | 0.802945 | 4.408586e-49 | -8.615850e-47 |
Msa0782090 | Msa0912160 | 0.821708 | 3.497283e-53 | -8.615850e-47 |
Msa0782090 | Msa0919490 | 0.818706 | 1.703880e-52 | -8.615850e-47 |
Msa0782090 | Msa0929400 | 0.802066 | 6.691525e-49 | -8.615850e-47 |
Msa0782090 | Msa0951720 | 0.825923 | 3.597201e-54 | -8.615850e-47 |
Msa0782090 | Msa0957800 | 0.835792 | 1.364867e-56 | -8.615850e-47 |
Msa0782090 | Msa0984840 | 0.835449 | 1.666848e-56 | -8.615850e-47 |
Msa0782090 | Msa0984850 | 0.806066 | 9.850739e-50 | -8.615850e-47 |
Msa0782090 | Msa0984860 | 0.801276 | 9.718236e-49 | -8.615850e-47 |
Msa0782090 | Msa0986870 | 0.834323 | 3.202878e-56 | -8.615850e-47 |
Msa0782090 | Msa1006460 | 0.810461 | 1.139438e-50 | -8.615850e-47 |
Msa0782090 | Msa1006600 | 0.804148 | 2.482704e-49 | -8.615850e-47 |
Msa0782090 | Msa1006680 | 0.817062 | 4.007435e-52 | -8.615850e-47 |
Msa0782090 | Msa1008340 | 0.826148 | 3.180752e-54 | -8.615850e-47 |
Msa0782090 | Msa1008960 | 0.815578 | 8.604201e-52 | -8.615850e-47 |
Msa0782090 | Msa1009150 | 0.813683 | 2.261322e-51 | -8.615850e-47 |
Msa0782090 | Msa1009170 | 0.812017 | 5.237809e-51 | -8.615850e-47 |
Msa0782090 | Msa1009180 | 0.804675 | 1.927593e-49 | -8.615850e-47 |
Msa0782090 | Msa1009220 | 0.821811 | 3.310689e-53 | -8.615850e-47 |
Msa0782090 | Msa1032350 | 0.811323 | 7.414808e-51 | -8.615850e-47 |
Msa0782090 | Msa1033670 | 0.828893 | 6.978811e-55 | -8.615850e-47 |
Msa0782090 | Msa1036360 | 0.805632 | 1.215246e-49 | -8.615850e-47 |
Msa0782090 | Msa1049950 | 0.827097 | 1.888059e-54 | -8.615850e-47 |
Msa0782090 | Msa1050500 | 0.804425 | 2.173472e-49 | -8.615850e-47 |
Msa0782090 | Msa1052080 | 0.819006 | 1.456469e-52 | -8.615850e-47 |
Msa0782090 | Msa1073500 | 0.813176 | 2.921532e-51 | -8.615850e-47 |
Msa0782090 | Msa1076630 | 0.802363 | 5.813754e-49 | -8.615850e-47 |
Msa0782090 | Msa1076640 | 0.805709 | 1.170963e-49 | -8.615850e-47 |
Msa0782090 | Msa1081600 | 0.800663 | 1.296703e-48 | -8.615850e-47 |
Msa0782090 | Msa1081700 | 0.805712 | 1.169515e-49 | -8.615850e-47 |
Msa0782090 | Msa1091730 | 0.809767 | 1.608094e-50 | -8.615850e-47 |
Msa0782090 | Msa1098350 | 0.818260 | 2.150912e-52 | -8.615850e-47 |
Msa0782090 | Msa1098380 | 0.825633 | 4.214783e-54 | -8.615850e-47 |
Msa0782090 | Msa1098990 | 0.818299 | 2.107240e-52 | -8.615850e-47 |
Msa0782090 | Msa1113210 | 0.838876 | 2.216324e-57 | -8.615850e-47 |
Msa0782090 | Msa1118140 | 0.800005 | 1.765211e-48 | -8.615850e-47 |
Msa0782090 | Msa1130650 | 0.808123 | 3.614598e-50 | -8.615850e-47 |
Msa0782090 | Msa1135660 | 0.836403 | 9.549303e-57 | -8.615850e-47 |
Msa0782090 | Msa1138450 | 0.827341 | 1.650287e-54 | -8.615850e-47 |
Msa0782090 | Msa1138480 | 0.848850 | 4.713509e-60 | -8.615850e-47 |
Msa0782090 | Msa1138490 | 0.820518 | 6.576395e-53 | -8.615850e-47 |
Msa0782090 | Msa1139240 | 0.829425 | 5.186388e-55 | -8.615850e-47 |
Msa0782090 | Msa1140460 | 0.828271 | 9.866370e-55 | -8.615850e-47 |
Msa0782090 | Msa1166370 | 0.800127 | 1.667452e-48 | -8.615850e-47 |
Msa0782090 | Msa1182780 | 0.845101 | 5.008635e-59 | -8.615850e-47 |
Msa0782090 | Msa1182830 | 0.813556 | 2.411647e-51 | -8.615850e-47 |
Msa0782090 | Msa1191390 | 0.808283 | 3.341335e-50 | -8.615850e-47 |
Msa0782090 | Msa1199750 | 0.831961 | 1.240748e-55 | -8.615850e-47 |
Msa0782090 | Msa1208250 | 0.821986 | 3.016460e-53 | -8.615850e-47 |
Msa0782090 | Msa1212740 | 0.834393 | 3.076386e-56 | -8.615850e-47 |
Msa0782090 | Msa1231520 | 0.816646 | 4.968459e-52 | -8.615850e-47 |
Msa0782090 | Msa1232330 | 0.804669 | 1.933721e-49 | -8.615850e-47 |
Msa0782090 | Msa1237260 | 0.803385 | 3.574778e-49 | -8.615850e-47 |
Msa0782090 | Msa1238130 | 0.826586 | 2.501189e-54 | -8.615850e-47 |
Msa0782090 | Msa1246560 | 0.804208 | 2.412575e-49 | -8.615850e-47 |
Msa0782090 | Msa1247720 | 0.835098 | 2.045076e-56 | -8.615850e-47 |
Msa0782090 | Msa1247860 | 0.837276 | 5.717417e-57 | -8.615850e-47 |
Msa0782090 | Msa1258280 | 0.805341 | 1.398882e-49 | -8.615850e-47 |
Msa0782090 | Msa1274310 | 0.805436 | 1.336361e-49 | -8.615850e-47 |
Msa0782090 | Msa1275340 | 0.804464 | 2.133691e-49 | -8.615850e-47 |
Msa0782090 | Msa1279310 | 0.830991 | 2.149144e-55 | -8.615850e-47 |
Msa0782090 | Msa1279320 | 0.808018 | 3.805422e-50 | -8.615850e-47 |
Msa0782090 | Msa1279330 | 0.804672 | 1.930985e-49 | -8.615850e-47 |
Msa0782090 | Msa1279850 | 0.807393 | 5.165790e-50 | -8.615850e-47 |
Msa0782090 | Msa1279860 | 0.840772 | 7.109207e-58 | -8.615850e-47 |
Msa0782090 | Msa1279870 | 0.829232 | 5.775980e-55 | -8.615850e-47 |
Msa0782090 | Msa1285820 | 0.817501 | 3.190989e-52 | -8.615850e-47 |
Msa0782090 | Msa1285830 | 0.830274 | 3.220003e-55 | -8.615850e-47 |
Msa0782090 | Msa1287160 | 0.833521 | 5.086009e-56 | -8.615850e-47 |
Msa0782090 | Msa1287340 | 0.836140 | 1.114274e-56 | -8.615850e-47 |
Msa0782090 | Msa1298290 | 0.813759 | 2.174868e-51 | -8.615850e-47 |
Msa0782090 | Msa1304850 | 0.833597 | 4.867995e-56 | -8.615850e-47 |
Msa0782090 | Msa1311150 | 0.805232 | 1.474540e-49 | -8.615850e-47 |
Msa0782090 | Msa1311550 | 0.803284 | 3.751552e-49 | -8.615850e-47 |
Msa0782090 | Msa1319440 | 0.824463 | 7.964841e-54 | -8.615850e-47 |
Msa0782090 | Msa1328600 | 0.839889 | 1.209095e-57 | -8.615850e-47 |
Msa0782090 | Msa1328790 | 0.809854 | 1.540360e-50 | -8.615850e-47 |
Msa0782090 | Msa1343770 | 0.816030 | 6.823879e-52 | -8.615850e-47 |
Msa0782090 | Msa1352060 | 0.823724 | 1.187598e-53 | -8.615850e-47 |
Msa0782090 | Msa1357380 | 0.825509 | 4.509169e-54 | -8.615850e-47 |
Msa0782090 | Msa1365120 | 0.801802 | 7.580407e-49 | -8.615850e-47 |
Msa0782090 | Msa1366700 | 0.813912 | 2.012972e-51 | -8.615850e-47 |
Msa0782090 | Msa1371840 | 0.806937 | 6.454222e-50 | -8.615850e-47 |
Msa0782090 | Msa1373950 | 0.802613 | 5.161966e-49 | -8.615850e-47 |
Msa0782090 | Msa1396820 | 0.808451 | 3.077314e-50 | -8.615850e-47 |
Msa0782090 | Msa1397540 | 0.815677 | 8.180171e-52 | -8.615850e-47 |
Msa0782090 | Msa1405470 | 0.822387 | 2.434553e-53 | -8.615850e-47 |
Msa0782090 | Msa1437650 | 0.819960 | 8.824039e-53 | -8.615850e-47 |
Msa0782090 | Msa1445250 | 0.824605 | 7.374373e-54 | -8.615850e-47 |
Msa0782090 | Msa1447440 | 0.804333 | 2.271817e-49 | -8.615850e-47 |
Msa0782090 | Msa1450420 | 0.801275 | 9.722363e-49 | -8.615850e-47 |
Msa0782090 | Msa1457070 | 0.803261 | 3.793850e-49 | -8.615850e-47 |
Msa0782090 | Msa1459170 | 0.845398 | 4.163822e-59 | -8.615850e-47 |
Msa0782090 | Msa1460310 | -0.819778 | 9.711233e-53 | -8.615850e-47 |
Msa0135360 | Msa0782090 | 0.814568 | 1.441671e-51 | -8.615850e-47 |
Msa0148430 | Msa0782090 | 0.818088 | 2.352242e-52 | -8.615850e-47 |
Msa0151870 | Msa0782090 | 0.820047 | 8.431258e-53 | -8.615850e-47 |
Msa0153440 | Msa0782090 | 0.844732 | 6.301672e-59 | -8.615850e-47 |
Msa0164700 | Msa0782090 | 0.820718 | 5.914327e-53 | -8.615850e-47 |
Msa0166580 | Msa0782090 | 0.821277 | 4.398937e-53 | -8.615850e-47 |
Msa0169960 | Msa0782090 | 0.807510 | 4.880972e-50 | -8.615850e-47 |
Msa0180290 | Msa0782090 | 0.821263 | 4.430406e-53 | -8.615850e-47 |
Msa0190980 | Msa0782090 | 0.817380 | 3.397695e-52 | -8.615850e-47 |
Msa0211670 | Msa0782090 | 0.807341 | 5.298923e-50 | -8.615850e-47 |
Msa0227800 | Msa0782090 | 0.810720 | 1.001799e-50 | -8.615850e-47 |
Msa0228130 | Msa0782090 | 0.800463 | 1.424404e-48 | -8.615850e-47 |
Msa0228180 | Msa0782090 | 0.817362 | 3.430740e-52 | -8.615850e-47 |
Msa0232860 | Msa0782090 | 0.846034 | 2.797690e-59 | -8.615850e-47 |
Msa0235550 | Msa0782090 | 0.809239 | 2.087080e-50 | -8.615850e-47 |
Msa0365360 | Msa0782090 | 0.829347 | 5.415146e-55 | -8.615850e-47 |
Msa0389050 | Msa0782090 | 0.864475 | 1.184040e-64 | -8.615850e-47 |
Msa0389060 | Msa0782090 | 0.803873 | 2.832206e-49 | -8.615850e-47 |
Msa0409820 | Msa0782090 | 0.802538 | 5.350855e-49 | -8.615850e-47 |
Msa0410960 | Msa0782090 | 0.800877 | 1.172766e-48 | -8.615850e-47 |
Msa0411000 | Msa0782090 | 0.805442 | 1.332131e-49 | -8.615850e-47 |
Msa0423600 | Msa0782090 | 0.804812 | 1.804590e-49 | -8.615850e-47 |
Msa0434890 | Msa0782090 | -0.820796 | 5.674444e-53 | -8.615850e-47 |
Msa0439700 | Msa0782090 | 0.800748 | 1.245915e-48 | -8.615850e-47 |
Msa0440110 | Msa0782090 | 0.809222 | 2.105295e-50 | -8.615850e-47 |
Msa0452010 | Msa0782090 | 0.843683 | 1.205343e-58 | -8.615850e-47 |
Msa0454940 | Msa0782090 | 0.812260 | 4.637542e-51 | -8.615850e-47 |
Msa0455260 | Msa0782090 | 0.821572 | 3.760390e-53 | -8.615850e-47 |
Msa0457370 | Msa0782090 | 0.819226 | 1.297798e-52 | -8.615850e-47 |
Msa0458790 | Msa0782090 | 0.801836 | 7.461956e-49 | -8.615850e-47 |
Msa0470650 | Msa0782090 | 0.801663 | 8.098453e-49 | -8.615850e-47 |
Msa0481320 | Msa0782090 | 0.830656 | 2.596897e-55 | -8.615850e-47 |
Msa0254190 | Msa0782090 | 0.832620 | 8.521649e-56 | -8.615850e-47 |
Msa0264940 | Msa0782090 | -0.818056 | 2.392159e-52 | -8.615850e-47 |
Msa0266380 | Msa0782090 | 0.800551 | 1.366550e-48 | -8.615850e-47 |
Msa0302990 | Msa0782090 | -0.820130 | 8.068065e-53 | -8.615850e-47 |
Msa0304990 | Msa0782090 | 0.823999 | 1.023368e-53 | -8.615850e-47 |
Msa0311620 | Msa0782090 | 0.809311 | 2.015030e-50 | -8.615850e-47 |
Msa0312780 | Msa0782090 | 0.808061 | 3.726923e-50 | -8.615850e-47 |
Msa0319090 | Msa0782090 | 0.808375 | 3.194347e-50 | -8.615850e-47 |
Msa0330270 | Msa0782090 | 0.801148 | 1.032348e-48 | -8.615850e-47 |
Msa0363440 | Msa0782090 | 0.823833 | 1.119399e-53 | -8.615850e-47 |
Msa0492740 | Msa0782090 | 0.801944 | 7.091029e-49 | -8.615850e-47 |
Msa0499710 | Msa0782090 | 0.803191 | 3.920829e-49 | -8.615850e-47 |
Msa0501470 | Msa0782090 | 0.801799 | 7.593208e-49 | -8.615850e-47 |
Msa0502910 | Msa0782090 | 0.806502 | 7.974452e-50 | -8.615850e-47 |
Msa0543310 | Msa0782090 | 0.820152 | 7.976158e-53 | -8.615850e-47 |
Msa0544930 | Msa0782090 | 0.801877 | 7.318049e-49 | -8.615850e-47 |
Msa0589610 | Msa0782090 | 0.810745 | 9.895806e-51 | -8.615850e-47 |
Msa0599250 | Msa0782090 | 0.862656 | 4.341976e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0782090 | MtrunA17_Chr5g0439121 | 81.652 | 1259 | 119 | 9 | 1 | 1183 | 667 | 1889 | 0.0 | 2004 |
Msa0782090 | MtrunA17_Chr3g0108011 | 27.124 | 977 | 510 | 34 | 23 | 913 | 730 | 1590 | 2.59e-66 | 246 |
Msa0782090 | MtrunA17_Chr3g0107931 | 27.364 | 994 | 536 | 37 | 23 | 916 | 725 | 1632 | 2.99e-64 | 240 |
Msa0782090 | MtrunA17_Chr3g0091861 | 26.326 | 999 | 574 | 31 | 18 | 918 | 632 | 1566 | 8.36e-61 | 229 |
Msa0782090 | MtrunA17_Chr3g0105551 | 27.890 | 839 | 396 | 33 | 23 | 805 | 690 | 1375 | 5.15e-53 | 204 |
Msa0782090 | MtrunA17_Chr3g0108151 | 32.934 | 501 | 251 | 13 | 316 | 775 | 747 | 1203 | 2.59e-52 | 201 |
Msa0782090 | MtrunA17_Chr3g0108151 | 24.956 | 569 | 305 | 17 | 5 | 493 | 646 | 1172 | 2.49e-28 | 124 |
Msa0782090 | MtrunA17_Chr1g0160951 | 32.265 | 499 | 264 | 16 | 317 | 790 | 804 | 1253 | 2.65e-50 | 195 |
Msa0782090 | MtrunA17_Chr1g0160951 | 23.441 | 401 | 244 | 12 | 116 | 493 | 841 | 1201 | 3.17e-16 | 84.7 |
Msa0782090 | MtrunA17_Chr1g0160951 | 25.000 | 548 | 276 | 25 | 14 | 464 | 600 | 1109 | 2.19e-14 | 78.6 |
Msa0782090 | MtrunA17_Chr3g0105481 | 27.436 | 780 | 382 | 24 | 91 | 773 | 563 | 1255 | 3.57e-50 | 194 |
Msa0782090 | MtrunA17_Chr3g0105481 | 24.593 | 614 | 294 | 20 | 23 | 493 | 639 | 1226 | 3.80e-29 | 126 |
Msa0782090 | MtrunA17_Chr5g0443761 | 30.380 | 553 | 311 | 17 | 316 | 827 | 635 | 1154 | 4.40e-46 | 181 |
Msa0782090 | MtrunA17_Chr5g0443761 | 28.114 | 562 | 306 | 19 | 14 | 501 | 531 | 1068 | 2.14e-33 | 140 |
Msa0782090 | MtrunA17_Chr3g0108821 | 29.795 | 537 | 296 | 18 | 349 | 861 | 1042 | 1521 | 3.81e-45 | 179 |
Msa0782090 | MtrunA17_Chr3g0108821 | 27.729 | 458 | 251 | 15 | 316 | 766 | 796 | 1180 | 3.86e-21 | 100 |
Msa0782090 | MtrunA17_Chr3g0108821 | 29.137 | 278 | 139 | 8 | 19 | 258 | 697 | 954 | 4.92e-18 | 90.5 |
Msa0782090 | MtrunA17_Chr3g0108821 | 23.762 | 404 | 236 | 12 | 118 | 503 | 1044 | 1393 | 9.34e-17 | 86.3 |
Msa0782090 | MtrunA17_Chr3g0108171 | 26.755 | 755 | 341 | 26 | 320 | 932 | 822 | 1506 | 2.35e-43 | 173 |
Msa0782090 | MtrunA17_Chr3g0108171 | 23.889 | 540 | 285 | 15 | 23 | 463 | 723 | 1235 | 2.58e-28 | 124 |
Msa0782090 | MtrunA17_Chr3g0108171 | 25.000 | 328 | 192 | 10 | 178 | 503 | 1053 | 1328 | 6.89e-14 | 77.0 |
Msa0782090 | MtrunA17_Chr3g0108071 | 26.308 | 669 | 369 | 22 | 130 | 775 | 2 | 569 | 1.97e-42 | 169 |
Msa0782090 | MtrunA17_Chr3g0108071 | 27.764 | 407 | 226 | 12 | 362 | 763 | 1 | 344 | 1.50e-16 | 85.5 |
Msa0782090 | MtrunA17_Chr3g0108071 | 25.602 | 332 | 170 | 10 | 118 | 398 | 213 | 518 | 1.68e-12 | 72.4 |
Msa0782090 | MtrunA17_Chr3g0108111 | 30.675 | 489 | 266 | 17 | 449 | 874 | 55 | 533 | 5.57e-42 | 164 |
Msa0782090 | MtrunA17_Chr3g0108111 | 24.084 | 382 | 236 | 12 | 129 | 493 | 5 | 349 | 9.34e-15 | 79.0 |
Msa0782090 | MtrunA17_Chr8g0360991 | 29.530 | 447 | 247 | 13 | 353 | 786 | 836 | 1227 | 1.02e-38 | 157 |
Msa0782090 | MtrunA17_Chr8g0360991 | 25.046 | 539 | 308 | 14 | 8 | 497 | 695 | 1186 | 9.79e-25 | 112 |
Msa0782090 | MtrunA17_Chr3g0099591 | 28.868 | 530 | 300 | 17 | 13 | 497 | 693 | 1190 | 1.85e-38 | 156 |
Msa0782090 | MtrunA17_Chr3g0099591 | 29.208 | 404 | 233 | 8 | 355 | 748 | 832 | 1192 | 4.65e-36 | 149 |
Msa0782090 | MtrunA17_Chr3g0100261 | 30.752 | 439 | 229 | 14 | 349 | 767 | 838 | 1221 | 7.97e-36 | 148 |
Msa0782090 | MtrunA17_Chr3g0100261 | 26.306 | 536 | 311 | 15 | 9 | 497 | 701 | 1199 | 3.25e-29 | 126 |
Msa0782090 | MtrunA17_Chr3g0108811 | 29.885 | 348 | 195 | 8 | 355 | 698 | 1069 | 1371 | 1.15e-34 | 145 |
Msa0782090 | MtrunA17_Chr3g0108811 | 22.090 | 842 | 487 | 32 | 113 | 861 | 900 | 1665 | 1.23e-24 | 112 |
Msa0782090 | MtrunA17_Chr3g0108811 | 28.043 | 460 | 255 | 16 | 316 | 766 | 809 | 1201 | 6.02e-23 | 106 |
Msa0782090 | MtrunA17_Chr3g0108811 | 28.328 | 293 | 158 | 9 | 6 | 258 | 695 | 975 | 1.21e-18 | 92.8 |
Msa0782090 | MtrunA17_Chr3g0105601 | 27.624 | 543 | 292 | 18 | 317 | 815 | 18 | 503 | 6.83e-33 | 134 |
Msa0782090 | MtrunA17_Chr3g0105601 | 23.738 | 535 | 295 | 17 | 160 | 685 | 4 | 434 | 1.15e-19 | 94.0 |
Msa0782090 | MtrunA17_Chr3g0105521 | 24.181 | 641 | 318 | 18 | 14 | 493 | 561 | 1194 | 9.98e-32 | 135 |
Msa0782090 | MtrunA17_Chr3g0105521 | 38.693 | 199 | 116 | 4 | 575 | 770 | 1025 | 1220 | 3.15e-26 | 117 |
Msa0782090 | MtrunA17_Chr3g0105521 | 25.800 | 469 | 278 | 15 | 320 | 774 | 668 | 1080 | 1.45e-20 | 99.0 |
Msa0782090 | MtrunA17_Chr3g0107271 | 34.016 | 244 | 144 | 8 | 543 | 782 | 8 | 238 | 5.86e-30 | 119 |
Msa0782090 | MtrunA17_Chr3g0099571 | 28.256 | 407 | 211 | 12 | 29 | 390 | 711 | 1081 | 1.18e-25 | 115 |
Msa0782090 | MtrunA17_Chr3g0099571 | 24.789 | 355 | 199 | 9 | 290 | 630 | 774 | 1074 | 1.91e-17 | 88.6 |
Msa0782090 | MtrunA17_Chr3g0105501 | 37.436 | 195 | 111 | 5 | 584 | 777 | 5 | 189 | 1.51e-25 | 105 |
Msa0782090 | MtrunA17_Chr3g0097601 | 32.569 | 218 | 133 | 4 | 584 | 798 | 48 | 254 | 1.48e-23 | 101 |
Msa0782090 | MtrunA17_Chr3g0100241 | 35.106 | 188 | 115 | 5 | 586 | 767 | 17 | 203 | 1.56e-21 | 94.4 |
Msa0782090 | MtrunA17_Chr3g0100241 | 30.935 | 139 | 89 | 3 | 119 | 253 | 46 | 181 | 9.41e-11 | 63.2 |
Msa0782090 | MtrunA17_Chr3g0107181 | 26.537 | 309 | 183 | 7 | 14 | 287 | 676 | 975 | 1.66e-21 | 101 |
Msa0782090 | MtrunA17_Chr3g0107181 | 36.464 | 181 | 93 | 5 | 320 | 499 | 784 | 943 | 1.79e-18 | 91.7 |
Msa0782090 | MtrunA17_Chr3g0107081 | 36.264 | 182 | 101 | 4 | 608 | 789 | 34 | 200 | 1.73e-21 | 94.4 |
Msa0782090 | MtrunA17_Chr3g0106011 | 33.161 | 193 | 112 | 2 | 316 | 508 | 16 | 191 | 2.29e-21 | 95.5 |
Msa0782090 | MtrunA17_Chr3g0106011 | 33.514 | 185 | 102 | 5 | 91 | 266 | 20 | 192 | 1.91e-15 | 78.2 |
Msa0782090 | MtrunA17_Chr3g0096721 | 23.587 | 513 | 290 | 16 | 14 | 513 | 686 | 1109 | 3.09e-21 | 100 |
Msa0782090 | MtrunA17_Chr3g0096721 | 27.446 | 419 | 229 | 14 | 313 | 710 | 729 | 1093 | 2.34e-17 | 88.2 |
Msa0782090 | MtrunA17_Chr3g0096701 | 30.345 | 290 | 183 | 7 | 608 | 884 | 39 | 322 | 9.66e-21 | 98.6 |
Msa0782090 | MtrunA17_Chr3g0097621 | 30.712 | 267 | 141 | 7 | 33 | 260 | 111 | 372 | 1.16e-20 | 96.7 |
Msa0782090 | MtrunA17_Chr3g0097621 | 35.106 | 188 | 105 | 4 | 316 | 501 | 197 | 369 | 7.22e-18 | 88.2 |
Msa0782090 | MtrunA17_Chr3g0096821 | 28.541 | 473 | 250 | 17 | 313 | 770 | 730 | 1129 | 1.42e-20 | 98.6 |
Msa0782090 | MtrunA17_Chr3g0096821 | 27.778 | 252 | 137 | 7 | 14 | 255 | 687 | 903 | 2.18e-15 | 81.6 |
Msa0782090 | MtrunA17_Chr3g0091851 | 25.901 | 444 | 254 | 15 | 10 | 396 | 621 | 1046 | 2.43e-19 | 94.7 |
Msa0782090 | MtrunA17_Chr3g0091851 | 43.697 | 119 | 67 | 0 | 348 | 466 | 758 | 876 | 8.50e-15 | 79.7 |
Msa0782090 | MtrunA17_Chr3g0107281 | 26.214 | 515 | 277 | 16 | 267 | 773 | 59 | 478 | 5.50e-19 | 92.0 |
Msa0782090 | MtrunA17_Chr3g0107281 | 29.697 | 165 | 84 | 5 | 118 | 278 | 338 | 474 | 5.57e-13 | 73.2 |
Msa0782090 | MtrunA17_Chr3g0107211 | 32.995 | 197 | 121 | 3 | 316 | 508 | 854 | 1043 | 1.42e-18 | 92.0 |
Msa0782090 | MtrunA17_Chr3g0107211 | 27.586 | 290 | 167 | 7 | 116 | 367 | 891 | 1175 | 9.77e-18 | 89.4 |
Msa0782090 | MtrunA17_Chr3g0107211 | 24.889 | 225 | 128 | 5 | 23 | 212 | 707 | 925 | 4.31e-11 | 67.8 |
Msa0782090 | MtrunA17_Chr3g0097021 | 34.239 | 184 | 102 | 4 | 316 | 499 | 58 | 222 | 4.51e-18 | 86.7 |
Msa0782090 | MtrunA17_Chr3g0106021 | 25.850 | 441 | 248 | 13 | 192 | 616 | 3 | 380 | 1.50e-17 | 86.3 |
Msa0782090 | MtrunA17_Chr1g0174511 | 22.066 | 639 | 398 | 19 | 186 | 763 | 967 | 1566 | 1.68e-17 | 89.0 |
Msa0782090 | MtrunA17_Chr7g0229721 | 31.250 | 256 | 155 | 9 | 14 | 263 | 687 | 927 | 2.42e-17 | 88.2 |
Msa0782090 | MtrunA17_Chr1g0163991 | 22.154 | 650 | 411 | 17 | 118 | 716 | 626 | 1231 | 3.11e-17 | 87.8 |
Msa0782090 | MtrunA17_Chr1g0163991 | 22.074 | 675 | 399 | 21 | 143 | 742 | 380 | 1002 | 4.70e-15 | 80.9 |
Msa0782090 | MtrunA17_Chr3g0107071 | 28.571 | 245 | 138 | 6 | 14 | 255 | 7 | 217 | 4.95e-17 | 83.2 |
Msa0782090 | MtrunA17_Chr3g0107071 | 35.450 | 189 | 99 | 5 | 313 | 499 | 50 | 217 | 1.53e-13 | 72.8 |
Msa0782090 | MtrunA17_Chr3g0100231 | 37.888 | 161 | 82 | 6 | 349 | 498 | 541 | 694 | 1.82e-15 | 81.6 |
Msa0782090 | MtrunA17_Chr3g0100231 | 26.641 | 259 | 143 | 6 | 9 | 224 | 404 | 658 | 8.36e-14 | 76.3 |
Msa0782090 | MtrunA17_Chr3g0107981 | 30.734 | 218 | 125 | 7 | 43 | 255 | 1 | 197 | 2.27e-15 | 76.3 |
Msa0782090 | MtrunA17_Chr2g0288311 | 37.879 | 132 | 76 | 4 | 621 | 752 | 31 | 156 | 4.82e-15 | 74.7 |
Msa0782090 | MtrunA17_Chr1g0146241 | 20.584 | 685 | 431 | 21 | 115 | 752 | 898 | 1516 | 8.39e-15 | 80.1 |
Msa0782090 | MtrunA17_Chr1g0172231 | 21.845 | 737 | 445 | 25 | 52 | 709 | 413 | 1097 | 9.05e-15 | 79.7 |
Msa0782090 | MtrunA17_Chr1g0167981 | 21.446 | 802 | 513 | 26 | 27 | 765 | 736 | 1483 | 3.58e-14 | 78.2 |
Msa0782090 | MtrunA17_Chr1g0167981 | 21.823 | 724 | 419 | 28 | 116 | 771 | 1366 | 2010 | 2.75e-11 | 68.6 |
Msa0782090 | MtrunA17_Chr1g0172051 | 22.409 | 714 | 401 | 26 | 181 | 763 | 1394 | 2085 | 4.93e-14 | 77.8 |
Msa0782090 | MtrunA17_Chr2g0323691 | 22.835 | 635 | 398 | 20 | 186 | 763 | 970 | 1569 | 9.76e-14 | 76.6 |
Msa0782090 | MtrunA17_Chr8g0359891 | 21.651 | 642 | 397 | 20 | 186 | 763 | 846 | 1445 | 1.29e-13 | 76.3 |
Msa0782090 | MtrunA17_Chr8g0359891 | 23.175 | 630 | 392 | 21 | 181 | 763 | 430 | 1014 | 8.19e-12 | 70.5 |
Msa0782090 | MtrunA17_Chr3g0107631 | 35.862 | 145 | 85 | 3 | 362 | 506 | 1 | 137 | 1.51e-13 | 70.9 |
Msa0782090 | MtrunA17_Chr3g0107631 | 33.333 | 135 | 76 | 3 | 130 | 255 | 2 | 131 | 6.22e-13 | 68.9 |
Msa0782090 | MtrunA17_Chr1g0163891 | 22.118 | 642 | 394 | 22 | 186 | 763 | 983 | 1582 | 3.35e-13 | 74.7 |
Msa0782090 | MtrunA17_Chr6g0474571 | 21.456 | 522 | 316 | 14 | 201 | 698 | 764 | 1215 | 5.31e-13 | 74.3 |
Msa0782090 | MtrunA17_Chr6g0474571 | 22.833 | 600 | 373 | 21 | 186 | 771 | 969 | 1492 | 2.26e-11 | 68.9 |
Msa0782090 | MtrunA17_Chr1g0163791 | 21.656 | 628 | 414 | 20 | 186 | 763 | 967 | 1566 | 1.89e-12 | 72.4 |
Msa0782090 | MtrunA17_Chr3g0097641 | 38.788 | 165 | 92 | 4 | 346 | 508 | 786 | 943 | 2.50e-12 | 71.6 |
Msa0782090 | MtrunA17_Chr1g0170881 | 21.473 | 638 | 403 | 20 | 186 | 763 | 968 | 1567 | 1.42e-11 | 69.3 |
Msa0782090 | MtrunA17_Chr1g0163761 | 22.008 | 727 | 433 | 28 | 143 | 777 | 1343 | 2027 | 2.36e-11 | 68.9 |
Msa0782090 | MtrunA17_Chr2g0313491 | 21.827 | 788 | 460 | 37 | 24 | 716 | 741 | 1467 | 3.76e-11 | 68.2 |
Msa0782090 | MtrunA17_Chr7g0255111 | 24.547 | 497 | 273 | 23 | 317 | 770 | 948 | 1385 | 3.82e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 224 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTTGTTTCTCAGTTATT+TGG | 0.160303 | 5_2:+64744293 | Msa0782090:CDS |
GTTGAAGTTATTGAGAATTT+TGG | 0.185354 | 5_2:-64747326 | None:intergenic |
CCAAAACAGGAAGCTCAATT+TGG | 0.188028 | 5_2:-64746321 | None:intergenic |
AAACACAAAGTGTGGTTATT+TGG | 0.189214 | 5_2:-64749152 | None:intergenic |
GGACATATGGCGATCATATT+TGG | 0.196248 | 5_2:-64746367 | None:intergenic |
CCAAATTGAGCTTCCTGTTT+TGG | 0.204288 | 5_2:+64746321 | Msa0782090:CDS |
ACAGAGGGAAGCAGCTTTAA+AGG | 0.223551 | 5_2:+64749518 | Msa0782090:CDS |
CCTGAGTTGAAATATATATT+TGG | 0.225564 | 5_2:+64746268 | Msa0782090:CDS |
GAGAATTTGAAATACGTATT+TGG | 0.226685 | 5_2:+64744897 | Msa0782090:CDS |
TTCCAAAGCAAACAGTTTCT+TGG | 0.227880 | 5_2:+64749485 | Msa0782090:CDS |
ACTGTTTGCTTTGGAAATTT+TGG | 0.237768 | 5_2:-64749478 | None:intergenic |
AATAATTTGATGGTTGATTC+TGG | 0.267671 | 5_2:+64746457 | Msa0782090:CDS |
TTAAAGCAATTAGTAACTTA+TGG | 0.270832 | 5_2:+64746061 | Msa0782090:CDS |
TGCTCAAAATCTGGCGCAAC+TGG | 0.277872 | 5_2:+64744665 | Msa0782090:CDS |
TGCAAGAGGACTGGTAAAAT+TGG | 0.285380 | 5_2:+64746222 | Msa0782090:CDS |
AATCAAATCGTTGAGGATAT+TGG | 0.306245 | 5_2:+64745454 | Msa0782090:CDS |
TGCTAAAACCTTGACTTCAT+TGG | 0.306886 | 5_2:+64746009 | Msa0782090:CDS |
ATCCAAGAAACTGTTTGCTT+TGG | 0.314694 | 5_2:-64749487 | None:intergenic |
AGCTCAATTTGGAACTTGTT+TGG | 0.319304 | 5_2:-64746310 | None:intergenic |
GGTCACAGAAAATTTGTCTA+TGG | 0.326277 | 5_2:-64749418 | None:intergenic |
TATTTGAGGTCGATTATAAA+TGG | 0.326623 | 5_2:+64749694 | Msa0782090:CDS |
AGGGTAAGATATTCCAGTTC+TGG | 0.327387 | 5_2:-64747122 | None:intergenic |
TCCCTTGACATACATCATTC+AGG | 0.329018 | 5_2:-64747259 | None:intergenic |
TCAGACACTGACCAATCTTT+TGG | 0.333014 | 5_2:+64747292 | Msa0782090:CDS |
AATTGAGCATATGAAGCATT+TGG | 0.337966 | 5_2:+64744536 | Msa0782090:CDS |
TCAAGTTTGGTAAAGGAATA+GGG | 0.338346 | 5_2:-64747606 | None:intergenic |
AAATTTGTCTATGGTAATAA+AGG | 0.340812 | 5_2:-64749409 | None:intergenic |
GGACAAATGCTATTGATATT+CGG | 0.346837 | 5_2:-64744990 | None:intergenic |
TTGGACAATGACTTATATAT+AGG | 0.353133 | 5_2:-64744614 | None:intergenic |
GTCAAGTTTGGTAAAGGAAT+AGG | 0.353400 | 5_2:-64747607 | None:intergenic |
AGCTCAAGGCCTTGTACAAC+TGG | 0.354325 | 5_2:+64744851 | Msa0782090:CDS |
GCATCCTCAAAGACTCTTCC+AGG | 0.361705 | 5_2:-64749218 | None:intergenic |
AGCATTACATGTTTCAGTTT+CGG | 0.362165 | 5_2:-64747221 | None:intergenic |
CACATTAGATAACAATCTTC+TGG | 0.365720 | 5_2:-64745011 | None:intergenic |
GGTAGAACAGTGTGAGGAAT+TGG | 0.367063 | 5_2:+64746959 | Msa0782090:CDS |
TTTGTGTAGGAGTTGGTTAA+AGG | 0.368467 | 5_2:+64747992 | Msa0782090:intron |
TAATGCCGCGATCAAGGATT+TGG | 0.368482 | 5_2:+64744323 | Msa0782090:CDS |
TGTGAAGCTTCATTGATTAT+CGG | 0.370501 | 5_2:-64745119 | None:intergenic |
TTGGTCTTCCCAGTCTTATA+AGG | 0.372003 | 5_2:+64745936 | Msa0782090:CDS |
CCTTGTACAACTGGAGTGTT+TGG | 0.372146 | 5_2:+64744860 | Msa0782090:CDS |
ATCCCATGTGTTTCCAGAAC+TGG | 0.375180 | 5_2:+64747109 | Msa0782090:CDS |
TTCTGAGGGGATAGAATGTT+TGG | 0.376627 | 5_2:+64744455 | Msa0782090:CDS |
AAAGGAACAGATCATTCAAT+TGG | 0.379504 | 5_2:+64749536 | Msa0782090:CDS |
ACTTGCAGTTGCTCAAAATC+TGG | 0.381898 | 5_2:+64744656 | Msa0782090:CDS |
GAGAAGATAGACTTTAGTTT+CGG | 0.384241 | 5_2:-64746894 | None:intergenic |
TGAAAGAGCATAAGATGCTT+TGG | 0.384295 | 5_2:-64749380 | None:intergenic |
CTGACCTGGAAGAGTCTTTG+AGG | 0.384601 | 5_2:+64749214 | Msa0782090:CDS |
TTGAAGGCTTACACTATGTT+TGG | 0.386061 | 5_2:-64746841 | None:intergenic |
GAAGAGATCAGAAAACTAGA+AGG | 0.386150 | 5_2:+64746083 | Msa0782090:CDS |
ATCCATATGTACATTAGCTT+TGG | 0.388881 | 5_2:-64746813 | None:intergenic |
ACTAATATCATGTCCGATGC+TGG | 0.392088 | 5_2:+64745964 | Msa0782090:CDS |
ATTAGTATATGCTGAAGTTC+AGG | 0.397345 | 5_2:-64744711 | None:intergenic |
TTGGCAAATTGACACACTTA+AGG | 0.399656 | 5_2:-64746794 | None:intergenic |
TAACAAGAGTAAGCTCTTCC+AGG | 0.406999 | 5_2:-64744962 | None:intergenic |
TATCGTACCTCTGTCAAGTT+TGG | 0.408698 | 5_2:-64747619 | None:intergenic |
GAGAAACTCGTCCTGGAAAC+CGG | 0.413836 | 5_2:-64744259 | None:intergenic |
TATTGTTGTAAGTATCAGTT+TGG | 0.414344 | 5_2:-64749047 | None:intergenic |
AGAAGTTAAGAGCCGTTAGA+AGG | 0.415578 | 5_2:-64749281 | None:intergenic |
TTTATACTTTGAAATATGTC+AGG | 0.417098 | 5_2:-64744405 | None:intergenic |
GTGAAGAGACATGTTAGCTT+TGG | 0.418399 | 5_2:-64744633 | None:intergenic |
ATGTCTGTTATTATTGAAAA+CGG | 0.420882 | 5_2:+64746693 | Msa0782090:CDS |
CTATGTTGAGAGATAGCTAA+TGG | 0.421122 | 5_2:-64748768 | None:intergenic |
ATTGAGCATATGAAGCATTT+GGG | 0.421651 | 5_2:+64744537 | Msa0782090:CDS |
AGGCCTTGAGCTAAAGTGAT+TGG | 0.422035 | 5_2:-64744840 | None:intergenic |
ACAATTGTGCACCAAAAGAT+TGG | 0.425990 | 5_2:-64747303 | None:intergenic |
TATAAATACAAGAGAAAACT+TGG | 0.427928 | 5_2:+64749089 | Msa0782090:CDS |
TCTATCAATGAATAATTTGA+TGG | 0.428913 | 5_2:+64746447 | Msa0782090:CDS |
TCTTCTTCTGCAAGTTGCAT+TGG | 0.430866 | 5_2:+64744508 | Msa0782090:CDS |
GTCAATAACTGTGAGTTAGA+AGG | 0.430891 | 5_2:+64745173 | Msa0782090:CDS |
GATCATTGAGCTTTCTGCCC+TGG | 0.434908 | 5_2:+64744944 | Msa0782090:CDS |
TGAAGGCATCTTTCAAATGA+AGG | 0.439651 | 5_2:+64746725 | Msa0782090:CDS |
GGAACTTGTTTGGATATTGA+TGG | 0.439754 | 5_2:-64746300 | None:intergenic |
TTCCATAGGATTGAGATCAT+TGG | 0.442197 | 5_2:-64749115 | None:intergenic |
TTTGCAAATTGAATTGAAGC+AGG | 0.444835 | 5_2:-64745040 | None:intergenic |
ACTTCTTGTCCATTCTCACT+TGG | 0.445242 | 5_2:-64746753 | None:intergenic |
GGCCTTGAGCTAAAGTGATT+GGG | 0.450874 | 5_2:-64744839 | None:intergenic |
TAGTGTTAACCTTATAAGAC+TGG | 0.453487 | 5_2:-64745945 | None:intergenic |
TGCCAAAGCTAATGTACATA+TGG | 0.453580 | 5_2:+64746811 | Msa0782090:CDS |
TGACATACATCATTCAGGTT+TGG | 0.454788 | 5_2:-64747254 | None:intergenic |
CAATTCAATTTGCAAAATTG+TGG | 0.456051 | 5_2:+64745047 | Msa0782090:CDS |
GATACAAGATTTAGAATCAC+AGG | 0.459572 | 5_2:+64747570 | Msa0782090:CDS |
ATCTTTAGCGCTTTCAATTG+AGG | 0.459966 | 5_2:-64745412 | None:intergenic |
CTAGTTCAAGTGTTTAAAGT+TGG | 0.464453 | 5_2:+64747161 | Msa0782090:CDS |
CCTTCATCATACTCTTCCAT+AGG | 0.468941 | 5_2:-64749129 | None:intergenic |
ATAGAGGGCCTAAGCATTCA+AGG | 0.470650 | 5_2:+64748542 | Msa0782090:CDS |
TACAATGGTCAAATGCCTCT+TGG | 0.471459 | 5_2:+64744567 | Msa0782090:CDS |
CATGCTACAAAGCTTTGATC+GGG | 0.473282 | 5_2:+64747364 | Msa0782090:CDS |
CTTACCATTACATATTCAAA+AGG | 0.475866 | 5_2:-64748605 | None:intergenic |
TGTTAGAGAGTGTGGTGTGC+TGG | 0.480269 | 5_2:+64744806 | Msa0782090:CDS |
TGGGCTTGATTGTGAGCAAT+CGG | 0.481155 | 5_2:-64748748 | None:intergenic |
CTTCTTGTCCATTCTCACTT+GGG | 0.481507 | 5_2:-64746752 | None:intergenic |
TATATCTAATGCCGCGATCA+AGG | 0.482151 | 5_2:+64744317 | Msa0782090:CDS |
AAATGCATTGAAGAAACTAT+AGG | 0.482552 | 5_2:+64749594 | Msa0782090:CDS |
CCAAACACTCCAGTTGTACA+AGG | 0.482754 | 5_2:-64744860 | None:intergenic |
CAGTCCTCTTGCAAATGAAA+CGG | 0.483083 | 5_2:-64746212 | None:intergenic |
TGCAGATAACTTAGTCGAAA+AGG | 0.483271 | 5_2:+64749185 | Msa0782090:CDS |
TAGAAGGGGAGAAATAGTTC+AGG | 0.486235 | 5_2:+64746099 | Msa0782090:CDS |
GATCAAGGATTTGGCCGAAA+AGG | 0.487795 | 5_2:+64744332 | Msa0782090:CDS |
ACCTCTGTCAAGTTTGGTAA+AGG | 0.487864 | 5_2:-64747613 | None:intergenic |
GGCCAATGATCTCAATCCTA+TGG | 0.489154 | 5_2:+64749113 | Msa0782090:CDS |
CGAAAAGGCCCTTTCTGACC+TGG | 0.489288 | 5_2:+64749200 | Msa0782090:CDS |
AAGGGAGTCCCAAGTGAGAA+TGG | 0.489677 | 5_2:+64746744 | Msa0782090:CDS |
GGCCTCGTTGTGATGAGCTT+CGG | 0.490127 | 5_2:-64749439 | None:intergenic |
CAAGTGTTTAAAGTTGGTCC+TGG | 0.491588 | 5_2:+64747167 | Msa0782090:CDS |
ATTTACTGAATTCATCTAGC+AGG | 0.492565 | 5_2:-64749765 | None:intergenic |
AGTCCTCTTGCAAATGAAAC+GGG | 0.493402 | 5_2:-64746211 | None:intergenic |
ATAAGTTGTACAACAACAAA+CGG | 0.502098 | 5_2:+64747511 | Msa0782090:CDS |
TTGGATATTGATGGGAAGAA+TGG | 0.503363 | 5_2:-64746291 | None:intergenic |
CGGATTGTTGTGTAAAGCCA+TGG | 0.503533 | 5_2:-64745099 | None:intergenic |
AAGACTCTTCCAGGTCAGAA+AGG | 0.505049 | 5_2:-64749209 | None:intergenic |
CGTTTCATTTGCAAGAGGAC+TGG | 0.505232 | 5_2:+64746213 | Msa0782090:CDS |
AAGTTTCATGTTAGAGAGTG+TGG | 0.505294 | 5_2:+64744798 | Msa0782090:CDS |
TACACTTTATAAGATAAGAT+AGG | 0.508869 | 5_2:+64749818 | Msa0782090:three_prime_UTR |
GTTGGTTAAAGGACAATCAA+TGG | 0.515267 | 5_2:+64748003 | Msa0782090:CDS |
ACAGTGTCTCAAAGAAATAG+AGG | 0.515813 | 5_2:+64748526 | Msa0782090:intron |
GCAGAGGTCTTGTGTATAGC+AGG | 0.518876 | 5_2:+64744354 | Msa0782090:CDS |
TATGTTGAGAGATAGCTAAT+GGG | 0.520460 | 5_2:-64748767 | None:intergenic |
AGACTCTTCCAGGTCAGAAA+GGG | 0.530342 | 5_2:-64749208 | None:intergenic |
CTTCTTGTCATGAACGATGT+TGG | 0.530497 | 5_2:+64746424 | Msa0782090:CDS |
AAAGTGTATTTATTACATGT+AGG | 0.530950 | 5_2:-64749803 | None:intergenic |
TTGTGTATAGCAGGTATTGA+GGG | 0.534614 | 5_2:+64744363 | Msa0782090:CDS |
ATGGACAAGAAGTGATATCC+TGG | 0.536585 | 5_2:+64746763 | Msa0782090:CDS |
TTACTAATTGCTTTAAACCA+TGG | 0.537762 | 5_2:-64746054 | None:intergenic |
CAGAAGATTGTTATCTAATG+TGG | 0.538683 | 5_2:+64745012 | Msa0782090:CDS |
CAATTCTTCCAATGAAGTCA+AGG | 0.539953 | 5_2:-64746017 | None:intergenic |
ATAAATACAAGAGAAAACTT+GGG | 0.544896 | 5_2:+64749090 | Msa0782090:CDS |
TAGACTAGAGTCTTGATTGA+GGG | 0.544985 | 5_2:-64747141 | None:intergenic |
AACATATCTTCAAGAGGAGA+AGG | 0.547440 | 5_2:+64749569 | Msa0782090:CDS |
ATGAGCCAACAAAAGCCACT+TGG | 0.548390 | 5_2:+64748040 | Msa0782090:CDS |
GATGATTGAGAAACTCGTCC+TGG | 0.551510 | 5_2:-64744266 | None:intergenic |
AGAAGCAAACTTGAGGACTC+TGG | 0.551808 | 5_2:-64747022 | None:intergenic |
GGTGTCTATCAATACTTCCA+TGG | 0.552802 | 5_2:+64745082 | Msa0782090:CDS |
TATAGGCTACAAAACGGAGT+TGG | 0.554635 | 5_2:+64749611 | Msa0782090:CDS |
ACATGCTACAAAGCTTTGAT+CGG | 0.555163 | 5_2:+64747363 | Msa0782090:CDS |
CTAGGATCTTCAACAGAGGC+AGG | 0.555271 | 5_2:-64746935 | None:intergenic |
ATTGGCACTGCAATTCCCTC+AGG | 0.555694 | 5_2:+64745472 | Msa0782090:CDS |
GTCTTTGAGGATGCCTCTGA+AGG | 0.556623 | 5_2:+64749227 | Msa0782090:CDS |
AGCTCGGCAACAAATATTTG+AGG | 0.556668 | 5_2:+64749680 | Msa0782090:CDS |
TTGGTCCTGGTGTGAGAGAT+GGG | 0.556938 | 5_2:+64747180 | Msa0782090:CDS |
AGAAATAACATATCTTCAAG+AGG | 0.557377 | 5_2:+64749563 | Msa0782090:CDS |
TTGGTTAAAGGACAATCAAT+GGG | 0.559031 | 5_2:+64748004 | Msa0782090:CDS |
ACATCGTTCATGACAAGAAG+TGG | 0.559036 | 5_2:-64746421 | None:intergenic |
TTGCAAATTGAATTGAAGCA+GGG | 0.559445 | 5_2:-64745039 | None:intergenic |
GAAGGCATCTTTCAAATGAA+GGG | 0.560600 | 5_2:+64746726 | Msa0782090:CDS |
CCAAATATATATTTCAACTC+AGG | 0.561483 | 5_2:-64746268 | None:intergenic |
CTAATATCATGTCCGATGCT+GGG | 0.561510 | 5_2:+64745965 | Msa0782090:CDS |
GAAAACGGATCTGAAATTGA+AGG | 0.564218 | 5_2:+64746708 | Msa0782090:CDS |
TTATACTTTGAAATATGTCA+GGG | 0.566335 | 5_2:-64744404 | None:intergenic |
AATGGTCAAATGCCTCTTGG+TGG | 0.566581 | 5_2:+64744570 | Msa0782090:CDS |
CTAGACTAGAGTCTTGATTG+AGG | 0.567258 | 5_2:-64747142 | None:intergenic |
AACAAGAGTAAGCTCTTCCA+GGG | 0.567593 | 5_2:-64744961 | None:intergenic |
AAAGCTAATGTACATATGGA+TGG | 0.567886 | 5_2:+64746815 | Msa0782090:CDS |
TGGAAGATCAAATGAAAGCT+CGG | 0.568431 | 5_2:+64749664 | Msa0782090:CDS |
CCTCACACTGTTCTACCACT+AGG | 0.569504 | 5_2:-64746953 | None:intergenic |
AAAGATGTAGCTCTATCAGA+TGG | 0.570186 | 5_2:+64749321 | Msa0782090:CDS |
ACACTTAAGGTCTTCTAACC+AGG | 0.570784 | 5_2:-64746781 | None:intergenic |
ATCCCAATCACTTTAGCTCA+AGG | 0.571511 | 5_2:+64744837 | Msa0782090:CDS |
AAGAGATCAGAAAACTAGAA+GGG | 0.571970 | 5_2:+64746084 | Msa0782090:CDS |
GTTGGTCCTGGTGTGAGAGA+TGG | 0.572229 | 5_2:+64747179 | Msa0782090:CDS |
CTTGTGTATAGCAGGTATTG+AGG | 0.573493 | 5_2:+64744362 | Msa0782090:CDS |
CCTATGGAAGAGTATGATGA+AGG | 0.576533 | 5_2:+64749129 | Msa0782090:CDS |
CAGGACTCTCAAGACAGAGA+TGG | 0.577774 | 5_2:-64746916 | None:intergenic |
TCTTGTGCAGAGAGTTGAGA+AGG | 0.579325 | 5_2:+64748662 | Msa0782090:intron |
GAACTTGTTTGGATATTGAT+GGG | 0.579702 | 5_2:-64746299 | None:intergenic |
GGATTTGGCCGAAAAGGCAG+AGG | 0.584723 | 5_2:+64744338 | Msa0782090:CDS |
CTACCCGTTTCATTTGCAAG+AGG | 0.585330 | 5_2:+64746208 | Msa0782090:CDS |
CATTTGGGAGCTTTATACAA+TGG | 0.585469 | 5_2:+64744552 | Msa0782090:CDS |
AAATTGAATTGAAGCAGGGA+TGG | 0.585976 | 5_2:-64745035 | None:intergenic |
ACCTGAATGATGTATGTCAA+GGG | 0.587195 | 5_2:+64747258 | Msa0782090:CDS |
TAAGAGCCGTTAGAAGGCGA+AGG | 0.589692 | 5_2:-64749275 | None:intergenic |
AGTTGAGAAGGCTACTGAAG+AGG | 0.589930 | 5_2:+64748674 | Msa0782090:CDS |
AGAAACTATAGGCTACAAAA+CGG | 0.591909 | 5_2:+64749605 | Msa0782090:CDS |
ATGAAACGGGTAGTATACAC+TGG | 0.593405 | 5_2:-64746198 | None:intergenic |
TAAATACAAGAGAAAACTTG+GGG | 0.593544 | 5_2:+64749091 | Msa0782090:CDS |
CAAGTTTGGTAAAGGAATAG+GGG | 0.594297 | 5_2:-64747605 | None:intergenic |
AACTTCAACAACTACTGTTG+AGG | 0.594959 | 5_2:+64747340 | Msa0782090:CDS |
CTTGGATGATGCTCAACAGA+GGG | 0.597612 | 5_2:+64749503 | Msa0782090:CDS |
AAGCTAATGTACATATGGAT+GGG | 0.601355 | 5_2:+64746816 | Msa0782090:CDS |
TTATGTCGTGTAAGTGTGGA+CGG | 0.601754 | 5_2:-64747492 | None:intergenic |
AGTGTTAACCTTATAAGACT+GGG | 0.605559 | 5_2:-64745944 | None:intergenic |
AACCTGAATGATGTATGTCA+AGG | 0.607213 | 5_2:+64747257 | Msa0782090:CDS |
GCATAGTGTCTATTATAGCT+CGG | 0.611068 | 5_2:-64749347 | None:intergenic |
GGTTGACACTTGTCTGATCG+AGG | 0.612913 | 5_2:+64744476 | Msa0782090:CDS |
AACTGTGAGAAGCAAACTTG+AGG | 0.613619 | 5_2:-64747029 | None:intergenic |
CTTCTGATACGTGATTCTGA+GGG | 0.613722 | 5_2:+64744441 | Msa0782090:CDS |
CTGGAAACACATGGGATGTG+CGG | 0.615815 | 5_2:-64747103 | None:intergenic |
GCTTCTGATACGTGATTCTG+AGG | 0.618264 | 5_2:+64744440 | Msa0782090:CDS |
TGGTGTGAGAGATGGGAGAG+TGG | 0.618911 | 5_2:+64747187 | Msa0782090:CDS |
TTGACAATACAAGATTGCCA+TGG | 0.622401 | 5_2:+64746037 | Msa0782090:CDS |
CAGGATTTCTTGCAACAATG+TGG | 0.623390 | 5_2:-64749746 | None:intergenic |
TCCTTTACCAAACTTGACAG+AGG | 0.623727 | 5_2:+64747612 | Msa0782090:CDS |
TAGAGGGCCTAAGCATTCAA+GGG | 0.623984 | 5_2:+64748543 | Msa0782090:CDS |
ACTCTCCCATCTCTCACACC+AGG | 0.624756 | 5_2:-64747185 | None:intergenic |
GTACTTACAGATTCTCCAAG+TGG | 0.627401 | 5_2:-64748055 | None:intergenic |
CACTTCAGAAACACAAAGTG+TGG | 0.629775 | 5_2:-64749160 | None:intergenic |
ATTCCAGTTCTGGAAACACA+TGG | 0.630750 | 5_2:-64747112 | None:intergenic |
TTCGGCCAAATCCTTGATCG+CGG | 0.631077 | 5_2:-64744328 | None:intergenic |
AAACGGAGTTGGAGAATGTG+AGG | 0.631772 | 5_2:+64749622 | Msa0782090:CDS |
CAACTTATGTCGTGTAAGTG+TGG | 0.633609 | 5_2:-64747496 | None:intergenic |
AGAGATCAGAAAACTAGAAG+GGG | 0.634835 | 5_2:+64746085 | Msa0782090:CDS |
TTTGGAAGAAAGAGTAATGG+CGG | 0.638745 | 5_2:-64749460 | None:intergenic |
TAACAGCCTTCGCCTTCTAA+CGG | 0.640328 | 5_2:+64749269 | Msa0782090:CDS |
ATGAACAATGAACCCAGCAT+CGG | 0.640559 | 5_2:-64745977 | None:intergenic |
AGAGGGCCTAAGCATTCAAG+GGG | 0.645817 | 5_2:+64748544 | Msa0782090:CDS |
GCAAAGACGAGCATGTTGCA+TGG | 0.646809 | 5_2:-64746399 | None:intergenic |
CAGTGTCTCAAAGAAATAGA+GGG | 0.647088 | 5_2:+64748527 | Msa0782090:intron |
ACCACTAGGATCTTCAACAG+AGG | 0.648649 | 5_2:-64746939 | None:intergenic |
CCTAGTGGTAGAACAGTGTG+AGG | 0.655007 | 5_2:+64746953 | Msa0782090:CDS |
GCCTCTGTTGAAGATCCTAG+TGG | 0.655823 | 5_2:+64746938 | Msa0782090:CDS |
TCTTGGATGATGCTCAACAG+AGG | 0.659133 | 5_2:+64749502 | Msa0782090:CDS |
GACACTTGTCTGATCGAGGT+AGG | 0.661498 | 5_2:+64744480 | Msa0782090:CDS |
TCAGCTCAATCAAATCGTTG+AGG | 0.662541 | 5_2:+64745447 | Msa0782090:CDS |
GAGCTAGCTATGTCCTTCAG+AGG | 0.665087 | 5_2:-64749240 | None:intergenic |
TTCTCAAAATGACCACCAAG+AGG | 0.666178 | 5_2:-64744582 | None:intergenic |
TTCCAGTTCTGGAAACACAT+GGG | 0.669141 | 5_2:-64747111 | None:intergenic |
TTCTGATACGTGATTCTGAG+GGG | 0.679667 | 5_2:+64744442 | Msa0782090:CDS |
TGTATAGCAGGTATTGAGGG+AGG | 0.682161 | 5_2:+64744366 | Msa0782090:CDS |
AGTATGCTATTACAGGACGA+AGG | 0.704451 | 5_2:+64746639 | Msa0782090:intron |
TATATCTGCATTCTTGAACG+CGG | 0.708004 | 5_2:-64748700 | None:intergenic |
ATGCTACAAAGCTTTGATCG+GGG | 0.723716 | 5_2:+64747365 | Msa0782090:CDS |
AAATACAAGAGAAAACTTGG+GGG | 0.739234 | 5_2:+64749092 | Msa0782090:CDS |
GAAGGACATAGCTAGCTCAG+AGG | 0.748939 | 5_2:+64749245 | Msa0782090:CDS |
GACCGAAGCTCATCACAACG+AGG | 0.775182 | 5_2:+64749437 | Msa0782090:CDS |
GAGGGCCTAAGCATTCAAGG+GGG | 0.812207 | 5_2:+64748545 | Msa0782090:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACATGAAACTTTTTTAATTT+TGG | - | chr5_2:64744789-64744808 | None:intergenic | 15.0% |
!!! | AACAGTAATTTAATTTTACT+TGG | - | chr5_2:64748355-64748374 | None:intergenic | 15.0% |
!! | AGAATAAGATTATTAATGTA+GGG | - | chr5_2:64748429-64748448 | None:intergenic | 15.0% |
!! | AAGAATAAGATTATTAATGT+AGG | - | chr5_2:64748430-64748449 | None:intergenic | 15.0% |
!! | TACAACAATAAAAAAAACAA+AGG | + | chr5_2:64749060-64749079 | Msa0782090:CDS | 15.0% |
!!! | AATTTTTTTATATCAATGCA+TGG | + | chr5_2:64749912-64749931 | Msa0782090:three_prime_UTR | 15.0% |
!!! | TTATACTTTGAAATATGTCA+GGG | - | chr5_2:64744407-64744426 | None:intergenic | 20.0% |
!!! | TTTATACTTTGAAATATGTC+AGG | - | chr5_2:64744408-64744427 | None:intergenic | 20.0% |
!!! | GCTAAATGTTATGAAAATTT+TGG | + | chr5_2:64745568-64745587 | Msa0782090:intron | 20.0% |
!! | TAGATCATTTCTAATATACA+AGG | + | chr5_2:64745874-64745893 | Msa0782090:intron | 20.0% |
!! | TTAAAGCAATTAGTAACTTA+TGG | + | chr5_2:64746061-64746080 | Msa0782090:CDS | 20.0% |
!! | TCTATCAATGAATAATTTGA+TGG | + | chr5_2:64746447-64746466 | Msa0782090:CDS | 20.0% |
!! | ATGTCTGTTATTATTGAAAA+CGG | + | chr5_2:64746693-64746712 | Msa0782090:CDS | 20.0% |
!!! | TTTTCTCAAAGATTATAACT+TGG | + | chr5_2:64747429-64747448 | Msa0782090:intron | 20.0% |
!!! | ACAATATGTTATTTTAGACA+AGG | + | chr5_2:64747453-64747472 | Msa0782090:intron | 20.0% |
!! | AAAAAAAGAGAGAAACAAAA+TGG | - | chr5_2:64748195-64748214 | None:intergenic | 20.0% |
!!! | TTTTGTTTCTCTCTTTTTTT+TGG | + | chr5_2:64748195-64748214 | Msa0782090:intron | 20.0% |
!! | CTTATCTATATATCAACTAT+CGG | - | chr5_2:64748309-64748328 | None:intergenic | 20.0% |
!! | TTATAAAAGAAACTTACATG+TGG | - | chr5_2:64748801-64748820 | None:intergenic | 20.0% |
!!! | ATAAATCAGTACTATTTTGT+TGG | - | chr5_2:64748835-64748854 | None:intergenic | 20.0% |
!!! | AAGTTTTCTCTTGTATTTAT+AGG | - | chr5_2:64749090-64749109 | None:intergenic | 20.0% |
!! | TATAAATACAAGAGAAAACT+TGG | + | chr5_2:64749089-64749108 | Msa0782090:CDS | 20.0% |
!! | ATAAATACAAGAGAAAACTT+GGG | + | chr5_2:64749090-64749109 | Msa0782090:CDS | 20.0% |
!! | AAATTTGTCTATGGTAATAA+AGG | - | chr5_2:64749412-64749431 | None:intergenic | 20.0% |
!! | AAAGTGTATTTATTACATGT+AGG | - | chr5_2:64749806-64749825 | None:intergenic | 20.0% |
!! | TACACTTTATAAGATAAGAT+AGG | + | chr5_2:64749818-64749837 | Msa0782090:three_prime_UTR | 20.0% |
!! | AACTTTGTTTCTCAGTTATT+TGG | + | chr5_2:64744293-64744312 | Msa0782090:CDS | 25.0% |
! | TTGGACAATGACTTATATAT+AGG | - | chr5_2:64744617-64744636 | None:intergenic | 25.0% |
!! | GAGAATTTGAAATACGTATT+TGG | + | chr5_2:64744897-64744916 | Msa0782090:CDS | 25.0% |
! | CAATTCAATTTGCAAAATTG+TGG | + | chr5_2:64745047-64745066 | Msa0782090:CDS | 25.0% |
! | ATGTTTGGAAATGTTGTATT+TGG | + | chr5_2:64745250-64745269 | Msa0782090:intron | 25.0% |
!! | ATTTGTTGAAGATTTGGAAT+TGG | - | chr5_2:64745331-64745350 | None:intergenic | 25.0% |
! | AATTCCAAATCTTCAACAAA+TGG | + | chr5_2:64745330-64745349 | Msa0782090:intron | 25.0% |
! | CTGTAACTCTTATGTTAAAT+TGG | + | chr5_2:64745519-64745538 | Msa0782090:intron | 25.0% |
! | TTCTGTCTGTATATAATTCA+TGG | + | chr5_2:64745671-64745690 | Msa0782090:intron | 25.0% |
!! | TAATTCATGGTGATTTTCTA+TGG | + | chr5_2:64745684-64745703 | Msa0782090:intron | 25.0% |
! | TTGAATAAAATGTGCTTTGA+AGG | + | chr5_2:64745731-64745750 | Msa0782090:intron | 25.0% |
!!! | ATTTTGTTTTTCTTACCAAC+GGG | - | chr5_2:64745801-64745820 | None:intergenic | 25.0% |
!!! | GATTTTGTTTTTCTTACCAA+CGG | - | chr5_2:64745802-64745821 | None:intergenic | 25.0% |
! | ATTGTTAAATCTACCATGTA+TGG | - | chr5_2:64745849-64745868 | None:intergenic | 25.0% |
!! | TTACTAATTGCTTTAAACCA+TGG | - | chr5_2:64746057-64746076 | None:intergenic | 25.0% |
! | CCAAATATATATTTCAACTC+AGG | - | chr5_2:64746271-64746290 | None:intergenic | 25.0% |
!! | CCTGAGTTGAAATATATATT+TGG | + | chr5_2:64746268-64746287 | Msa0782090:CDS | 25.0% |
!! | AATAATTTGATGGTTGATTC+TGG | + | chr5_2:64746457-64746476 | Msa0782090:CDS | 25.0% |
!!! | TTTTAAGAAAGACAATGAGA+GGG | - | chr5_2:64746533-64746552 | None:intergenic | 25.0% |
! | AACAATTTCTATAGACATGT+GGG | - | chr5_2:64746594-64746613 | None:intergenic | 25.0% |
! | TAACAATTTCTATAGACATG+TGG | - | chr5_2:64746595-64746614 | None:intergenic | 25.0% |
! | TACTTAACATTAAGTCTGAT+AGG | - | chr5_2:64746623-64746642 | None:intergenic | 25.0% |
! | AATGTTAAGTATGCTATTAC+AGG | + | chr5_2:64746632-64746651 | Msa0782090:intron | 25.0% |
!!! | TTATTTTGTGAAGATGTTGA+AGG | - | chr5_2:64746860-64746879 | None:intergenic | 25.0% |
!! | GTTGAAGTTATTGAGAATTT+TGG | - | chr5_2:64747329-64747348 | None:intergenic | 25.0% |
! | ATAAGTTGTACAACAACAAA+CGG | + | chr5_2:64747511-64747530 | Msa0782090:CDS | 25.0% |
!! | TATATCTGGTTTCTTAAAAG+AGG | - | chr5_2:64747655-64747674 | None:intergenic | 25.0% |
! | AAGAAACCAGATATATTAGA+TGG | + | chr5_2:64747660-64747679 | Msa0782090:intron | 25.0% |
! | CAAATTCATAACTGATTGAA+AGG | + | chr5_2:64747749-64747768 | Msa0782090:intron | 25.0% |
! | ATATCAAAATGACTAGGAAT+TGG | - | chr5_2:64747775-64747794 | None:intergenic | 25.0% |
! | TGGTAAATATCAAAATGACT+AGG | - | chr5_2:64747781-64747800 | None:intergenic | 25.0% |
! | TGTATGGTGTAAAATAATCA+TGG | - | chr5_2:64747801-64747820 | None:intergenic | 25.0% |
!!! | AAGAAAAAGTTTTAGGTGTA+TGG | - | chr5_2:64747817-64747836 | None:intergenic | 25.0% |
!! | AAGGGAAAAGAAAAAGTTTT+AGG | - | chr5_2:64747824-64747843 | None:intergenic | 25.0% |
! | ATTTGTTCATTACTTTGTGT+AGG | + | chr5_2:64747979-64747998 | Msa0782090:intron | 25.0% |
!!! | ACAAAATGGTGATTTTTTTC+CGG | - | chr5_2:64748181-64748200 | None:intergenic | 25.0% |
!! | TTTTGGTAGAACAATCTTTA+AGG | + | chr5_2:64748212-64748231 | Msa0782090:intron | 25.0% |
!! | ATAATCTTTTATCACCAGAA+AGG | + | chr5_2:64748242-64748261 | Msa0782090:intron | 25.0% |
! | GCTTAAAGATTATCTTTAGT+AGG | - | chr5_2:64748287-64748306 | None:intergenic | 25.0% |
! | AAGATGTACTGTAATTCTAT+TGG | - | chr5_2:64748459-64748478 | None:intergenic | 25.0% |
! | CTTACCATTACATATTCAAA+AGG | - | chr5_2:64748608-64748627 | None:intergenic | 25.0% |
!!! | AACAGTTTTTTGGATTAAAG+TGG | - | chr5_2:64748968-64748987 | None:intergenic | 25.0% |
! | TTTAATCCAAAAAACTGTTG+TGG | + | chr5_2:64748969-64748988 | Msa0782090:intron | 25.0% |
!!! | AAAAACAAAAAAGGCATTAC+CGG | - | chr5_2:64748999-64749018 | None:intergenic | 25.0% |
! | TATTGTTGTAAGTATCAGTT+TGG | - | chr5_2:64749050-64749069 | None:intergenic | 25.0% |
! | TAAATACAAGAGAAAACTTG+GGG | + | chr5_2:64749091-64749110 | Msa0782090:CDS | 25.0% |
!!! | TACATCTTTTAAAGAAAGGT+GGG | - | chr5_2:64749310-64749329 | None:intergenic | 25.0% |
!!! | AATTTTGGAAGAAAGAGTAA+TGG | - | chr5_2:64749466-64749485 | None:intergenic | 25.0% |
! | AGAAATAACATATCTTCAAG+AGG | + | chr5_2:64749563-64749582 | Msa0782090:CDS | 25.0% |
! | AAATGCATTGAAGAAACTAT+AGG | + | chr5_2:64749594-64749613 | Msa0782090:CDS | 25.0% |
! | GAAAGACAAAAATCAAATTG+TGG | + | chr5_2:64749644-64749663 | Msa0782090:CDS | 25.0% |
!! | TATTTGAGGTCGATTATAAA+TGG | + | chr5_2:64749694-64749713 | Msa0782090:CDS | 25.0% |
! | AATTGAGCATATGAAGCATT+TGG | + | chr5_2:64744536-64744555 | Msa0782090:CDS | 30.0% |
! | ATTGAGCATATGAAGCATTT+GGG | + | chr5_2:64744537-64744556 | Msa0782090:CDS | 30.0% |
ATTAGTATATGCTGAAGTTC+AGG | - | chr5_2:64744714-64744733 | None:intergenic | 30.0% | |
GGACAAATGCTATTGATATT+CGG | - | chr5_2:64744993-64745012 | None:intergenic | 30.0% | |
CACATTAGATAACAATCTTC+TGG | - | chr5_2:64745014-64745033 | None:intergenic | 30.0% | |
CAGAAGATTGTTATCTAATG+TGG | + | chr5_2:64745012-64745031 | Msa0782090:CDS | 30.0% | |
TTGCAAATTGAATTGAAGCA+GGG | - | chr5_2:64745042-64745061 | None:intergenic | 30.0% | |
TTTGCAAATTGAATTGAAGC+AGG | - | chr5_2:64745043-64745062 | None:intergenic | 30.0% | |
! | AAATTGTGGAGAGTTTTTCA+TGG | + | chr5_2:64745061-64745080 | Msa0782090:CDS | 30.0% |
! | TGTGAAGCTTCATTGATTAT+CGG | - | chr5_2:64745122-64745141 | None:intergenic | 30.0% |
! | ATCTCCATTTGTTGAAGATT+TGG | - | chr5_2:64745337-64745356 | None:intergenic | 30.0% |
AATCAAATCGTTGAGGATAT+TGG | + | chr5_2:64745454-64745473 | Msa0782090:CDS | 30.0% | |
!! | AAAATGTGCTTTGAAGGATA+AGG | + | chr5_2:64745737-64745756 | Msa0782090:intron | 30.0% |
!! | AAATGTGCTTTGAAGGATAA+GGG | + | chr5_2:64745738-64745757 | Msa0782090:intron | 30.0% |
AGTGTTAACCTTATAAGACT+GGG | - | chr5_2:64745947-64745966 | None:intergenic | 30.0% | |
TAGTGTTAACCTTATAAGAC+TGG | - | chr5_2:64745948-64745967 | None:intergenic | 30.0% | |
AAGAGATCAGAAAACTAGAA+GGG | + | chr5_2:64746084-64746103 | Msa0782090:CDS | 30.0% | |
! | GAACTTGTTTGGATATTGAT+GGG | - | chr5_2:64746302-64746321 | None:intergenic | 30.0% |
! | AGTGCAAATTTTTCCAAAAC+AGG | - | chr5_2:64746337-64746356 | None:intergenic | 30.0% |
!!! | GTTTTAAGAAAGACAATGAG+AGG | - | chr5_2:64746534-64746553 | None:intergenic | 30.0% |
! | ATCCATATGTACATTAGCTT+TGG | - | chr5_2:64746816-64746835 | None:intergenic | 30.0% |
AAAGCTAATGTACATATGGA+TGG | + | chr5_2:64746815-64746834 | Msa0782090:CDS | 30.0% | |
AAGCTAATGTACATATGGAT+GGG | + | chr5_2:64746816-64746835 | Msa0782090:CDS | 30.0% | |
! | GAGAAGATAGACTTTAGTTT+CGG | - | chr5_2:64746897-64746916 | None:intergenic | 30.0% |
! | CTAGTTCAAGTGTTTAAAGT+TGG | + | chr5_2:64747161-64747180 | Msa0782090:CDS | 30.0% |
AGCATTACATGTTTCAGTTT+CGG | - | chr5_2:64747224-64747243 | None:intergenic | 30.0% | |
AAAGCACAAAATGAAACAGA+GGG | - | chr5_2:64747407-64747426 | None:intergenic | 30.0% | |
! | AAAAGCACAAAATGAAACAG+AGG | - | chr5_2:64747408-64747427 | None:intergenic | 30.0% |
!! | TGTTTTTGTTCTTCGATGTA+AGG | - | chr5_2:64747546-64747565 | None:intergenic | 30.0% |
! | GATACAAGATTTAGAATCAC+AGG | + | chr5_2:64747570-64747589 | Msa0782090:CDS | 30.0% |
TCAAGTTTGGTAAAGGAATA+GGG | - | chr5_2:64747609-64747628 | None:intergenic | 30.0% | |
TCTTCTCCATCTAATATATC+TGG | - | chr5_2:64747669-64747688 | None:intergenic | 30.0% | |
TATATTAGATGGAGAAGAGT+TGG | + | chr5_2:64747671-64747690 | Msa0782090:intron | 30.0% | |
ATTTCATTCTGCGGTAAAAA+GGG | - | chr5_2:64747842-64747861 | None:intergenic | 30.0% | |
!!! | GTGACTGAAACATTTTTTCT+TGG | + | chr5_2:64747887-64747906 | Msa0782090:intron | 30.0% |
TTGGTTAAAGGACAATCAAT+GGG | + | chr5_2:64748004-64748023 | Msa0782090:CDS | 30.0% | |
GAAAAAAAAACCAAGAACAC+CGG | + | chr5_2:64748159-64748178 | Msa0782090:intron | 30.0% | |
CAAAGTTATTATGACCTTTC+TGG | - | chr5_2:64748259-64748278 | None:intergenic | 30.0% | |
CATAAAAGAAAACAAGCTGT+AGG | - | chr5_2:64748502-64748521 | None:intergenic | 30.0% | |
! | TCGTCCTTTTGAATATGTAA+TGG | + | chr5_2:64748601-64748620 | Msa0782090:CDS | 30.0% |
TATGTTGAGAGATAGCTAAT+GGG | - | chr5_2:64748770-64748789 | None:intergenic | 30.0% | |
AAATACAAGAGAAAACTTGG+GGG | + | chr5_2:64749092-64749111 | Msa0782090:CDS | 30.0% | |
AAACACAAAGTGTGGTTATT+TGG | - | chr5_2:64749155-64749174 | None:intergenic | 30.0% | |
!! | CTACATCTTTTAAAGAAAGG+TGG | - | chr5_2:64749311-64749330 | None:intergenic | 30.0% |
!! | GAGCTACATCTTTTAAAGAA+AGG | - | chr5_2:64749314-64749333 | None:intergenic | 30.0% |
!!! | ACTGTTTGCTTTGGAAATTT+TGG | - | chr5_2:64749481-64749500 | None:intergenic | 30.0% |
AAAGGAACAGATCATTCAAT+TGG | + | chr5_2:64749536-64749555 | Msa0782090:CDS | 30.0% | |
AGAAACTATAGGCTACAAAA+CGG | + | chr5_2:64749605-64749624 | Msa0782090:CDS | 30.0% | |
ATTTACTGAATTCATCTAGC+AGG | - | chr5_2:64749768-64749787 | None:intergenic | 30.0% | |
!! | TTGTGTATAGCAGGTATTGA+GGG | + | chr5_2:64744363-64744382 | Msa0782090:CDS | 35.0% |
! | CATTTGGGAGCTTTATACAA+TGG | + | chr5_2:64744552-64744571 | Msa0782090:CDS | 35.0% |
AAGTTTCATGTTAGAGAGTG+TGG | + | chr5_2:64744798-64744817 | Msa0782090:CDS | 35.0% | |
AAATTGAATTGAAGCAGGGA+TGG | - | chr5_2:64745038-64745057 | None:intergenic | 35.0% | |
GTCAATAACTGTGAGTTAGA+AGG | + | chr5_2:64745173-64745192 | Msa0782090:CDS | 35.0% | |
! | TGGATCTTTTTCTCCATCAT+TGG | - | chr5_2:64745222-64745241 | None:intergenic | 35.0% |
ATTTCCAAACATGATGTCAG+TGG | - | chr5_2:64745242-64745261 | None:intergenic | 35.0% | |
! | TGTTGAAGATTTGGAATTGG+AGG | - | chr5_2:64745328-64745347 | None:intergenic | 35.0% |
CTTCAACAAATGGAGATAAG+TGG | + | chr5_2:64745340-64745359 | Msa0782090:intron | 35.0% | |
ATCTTTAGCGCTTTCAATTG+AGG | - | chr5_2:64745415-64745434 | None:intergenic | 35.0% | |
TGTCATCTGATGTTGTAGTA+AGG | - | chr5_2:64745606-64745625 | None:intergenic | 35.0% | |
TACAGACAGAATACACACTT+TGG | - | chr5_2:64745662-64745681 | None:intergenic | 35.0% | |
! | ATTTGCTTGATGACCATACA+TGG | + | chr5_2:64745833-64745852 | Msa0782090:intron | 35.0% |
CAAATGATCCTGAAAAGTAG+TGG | - | chr5_2:64745919-64745938 | None:intergenic | 35.0% | |
!! | CACTACTTTTCAGGATCATT+TGG | + | chr5_2:64745917-64745936 | Msa0782090:intron | 35.0% |
TGCTAAAACCTTGACTTCAT+TGG | + | chr5_2:64746009-64746028 | Msa0782090:CDS | 35.0% | |
CAATTCTTCCAATGAAGTCA+AGG | - | chr5_2:64746020-64746039 | None:intergenic | 35.0% | |
TTGACAATACAAGATTGCCA+TGG | + | chr5_2:64746037-64746056 | Msa0782090:CDS | 35.0% | |
GAAGAGATCAGAAAACTAGA+AGG | + | chr5_2:64746083-64746102 | Msa0782090:CDS | 35.0% | |
AGAGATCAGAAAACTAGAAG+GGG | + | chr5_2:64746085-64746104 | Msa0782090:CDS | 35.0% | |
TTGGATATTGATGGGAAGAA+TGG | - | chr5_2:64746294-64746313 | None:intergenic | 35.0% | |
! | GGAACTTGTTTGGATATTGA+TGG | - | chr5_2:64746303-64746322 | None:intergenic | 35.0% |
! | AGCTCAATTTGGAACTTGTT+TGG | - | chr5_2:64746313-64746332 | None:intergenic | 35.0% |
! | ATGGTAGTTTTCTGGACATA+TGG | - | chr5_2:64746383-64746402 | None:intergenic | 35.0% |
! | GAAAACGGATCTGAAATTGA+AGG | + | chr5_2:64746708-64746727 | Msa0782090:CDS | 35.0% |
!! | TGAAGGCATCTTTCAAATGA+AGG | + | chr5_2:64746725-64746744 | Msa0782090:CDS | 35.0% |
!! | GAAGGCATCTTTCAAATGAA+GGG | + | chr5_2:64746726-64746745 | Msa0782090:CDS | 35.0% |
TTGGCAAATTGACACACTTA+AGG | - | chr5_2:64746797-64746816 | None:intergenic | 35.0% | |
TGCCAAAGCTAATGTACATA+TGG | + | chr5_2:64746811-64746830 | Msa0782090:CDS | 35.0% | |
TTGAAGGCTTACACTATGTT+TGG | - | chr5_2:64746844-64746863 | None:intergenic | 35.0% | |
TAGACTAGAGTCTTGATTGA+GGG | - | chr5_2:64747144-64747163 | None:intergenic | 35.0% | |
! | TGACATACATCATTCAGGTT+TGG | - | chr5_2:64747257-64747276 | None:intergenic | 35.0% |
AACCTGAATGATGTATGTCA+AGG | + | chr5_2:64747257-64747276 | Msa0782090:CDS | 35.0% | |
ACCTGAATGATGTATGTCAA+GGG | + | chr5_2:64747258-64747277 | Msa0782090:CDS | 35.0% | |
ACAATTGTGCACCAAAAGAT+TGG | - | chr5_2:64747306-64747325 | None:intergenic | 35.0% | |
AACTTCAACAACTACTGTTG+AGG | + | chr5_2:64747340-64747359 | Msa0782090:CDS | 35.0% | |
! | ACATGCTACAAAGCTTTGAT+CGG | + | chr5_2:64747363-64747382 | Msa0782090:CDS | 35.0% |
CAAGTTTGGTAAAGGAATAG+GGG | - | chr5_2:64747608-64747627 | None:intergenic | 35.0% | |
GTCAAGTTTGGTAAAGGAAT+AGG | - | chr5_2:64747610-64747629 | None:intergenic | 35.0% | |
GATTTCATTCTGCGGTAAAA+AGG | - | chr5_2:64747843-64747862 | None:intergenic | 35.0% | |
!! | ATAACCCTTTTTCACAGTGT+TGG | + | chr5_2:64747923-64747942 | Msa0782090:intron | 35.0% |
TCATTACTTTGTGTAGGAGT+TGG | + | chr5_2:64747985-64748004 | Msa0782090:intron | 35.0% | |
! | TTTGTGTAGGAGTTGGTTAA+AGG | + | chr5_2:64747992-64748011 | Msa0782090:intron | 35.0% |
GTTGGTTAAAGGACAATCAA+TGG | + | chr5_2:64748003-64748022 | Msa0782090:CDS | 35.0% | |
!!! | TTTTGTTGGCTCATCAAACA+TGG | - | chr5_2:64748034-64748053 | None:intergenic | 35.0% |
AGCTGGTATTACATTGTTTG+AGG | - | chr5_2:64748091-64748110 | None:intergenic | 35.0% | |
!!! | TGATTTTTTTCCGGTGTTCT+TGG | - | chr5_2:64748172-64748191 | None:intergenic | 35.0% |
!! | TCTATTTCTTTGAGACACTG+TGG | - | chr5_2:64748527-64748546 | None:intergenic | 35.0% |
ACAGTGTCTCAAAGAAATAG+AGG | + | chr5_2:64748526-64748545 | Msa0782090:intron | 35.0% | |
CAGTGTCTCAAAGAAATAGA+GGG | + | chr5_2:64748527-64748546 | Msa0782090:intron | 35.0% | |
TATATCTGCATTCTTGAACG+CGG | - | chr5_2:64748703-64748722 | None:intergenic | 35.0% | |
CTATGTTGAGAGATAGCTAA+TGG | - | chr5_2:64748771-64748790 | None:intergenic | 35.0% | |
TGATTTATTGTTTGCCACAG+AGG | + | chr5_2:64748847-64748866 | Msa0782090:intron | 35.0% | |
AAAAAACTGTTGTGGCTAAC+CGG | + | chr5_2:64748977-64748996 | Msa0782090:intron | 35.0% | |
GGCAGGAACAAAAACAAAAA+AGG | - | chr5_2:64749008-64749027 | None:intergenic | 35.0% | |
TTCCATAGGATTGAGATCAT+TGG | - | chr5_2:64749118-64749137 | None:intergenic | 35.0% | |
TGCAGATAACTTAGTCGAAA+AGG | + | chr5_2:64749185-64749204 | Msa0782090:CDS | 35.0% | |
! | AAAGATGTAGCTCTATCAGA+TGG | + | chr5_2:64749321-64749340 | Msa0782090:CDS | 35.0% |
GCATAGTGTCTATTATAGCT+CGG | - | chr5_2:64749350-64749369 | None:intergenic | 35.0% | |
! | TGAAAGAGCATAAGATGCTT+TGG | - | chr5_2:64749383-64749402 | None:intergenic | 35.0% |
GGTCACAGAAAATTTGTCTA+TGG | - | chr5_2:64749421-64749440 | None:intergenic | 35.0% | |
TTTGGAAGAAAGAGTAATGG+CGG | - | chr5_2:64749463-64749482 | None:intergenic | 35.0% | |
TTCCAAAGCAAACAGTTTCT+TGG | + | chr5_2:64749485-64749504 | Msa0782090:CDS | 35.0% | |
ATCCAAGAAACTGTTTGCTT+TGG | - | chr5_2:64749490-64749509 | None:intergenic | 35.0% | |
AACATATCTTCAAGAGGAGA+AGG | + | chr5_2:64749569-64749588 | Msa0782090:CDS | 35.0% | |
TGGAAGATCAAATGAAAGCT+CGG | + | chr5_2:64749664-64749683 | Msa0782090:CDS | 35.0% | |
TATATCTAATGCCGCGATCA+AGG | + | chr5_2:64744317-64744336 | Msa0782090:CDS | 40.0% | |
! | CTTGTGTATAGCAGGTATTG+AGG | + | chr5_2:64744362-64744381 | Msa0782090:CDS | 40.0% |
CTTCTGATACGTGATTCTGA+GGG | + | chr5_2:64744441-64744460 | Msa0782090:CDS | 40.0% | |
TTCTGATACGTGATTCTGAG+GGG | + | chr5_2:64744442-64744461 | Msa0782090:CDS | 40.0% | |
! | TTCTGAGGGGATAGAATGTT+TGG | + | chr5_2:64744455-64744474 | Msa0782090:CDS | 40.0% |
TCTTCTTCTGCAAGTTGCAT+TGG | + | chr5_2:64744508-64744527 | Msa0782090:CDS | 40.0% | |
TACAATGGTCAAATGCCTCT+TGG | + | chr5_2:64744567-64744586 | Msa0782090:CDS | 40.0% | |
TTCTCAAAATGACCACCAAG+AGG | - | chr5_2:64744585-64744604 | None:intergenic | 40.0% | |
! | GTGAAGAGACATGTTAGCTT+TGG | - | chr5_2:64744636-64744655 | None:intergenic | 40.0% |
ACTTGCAGTTGCTCAAAATC+TGG | + | chr5_2:64744656-64744675 | Msa0782090:CDS | 40.0% | |
! | ATCCCAATCACTTTAGCTCA+AGG | + | chr5_2:64744837-64744856 | Msa0782090:CDS | 40.0% |
AACAAGAGTAAGCTCTTCCA+GGG | - | chr5_2:64744964-64744983 | None:intergenic | 40.0% | |
TAACAAGAGTAAGCTCTTCC+AGG | - | chr5_2:64744965-64744984 | None:intergenic | 40.0% | |
GGTGTCTATCAATACTTCCA+TGG | + | chr5_2:64745082-64745101 | Msa0782090:CDS | 40.0% | |
!! | GAAGGTATCTTTCAGCTAGT+TGG | + | chr5_2:64745191-64745210 | Msa0782090:intron | 40.0% |
CTAGTTGGACTAACCAATGA+TGG | + | chr5_2:64745206-64745225 | Msa0782090:intron | 40.0% | |
AGATCCACTGACATCATGTT+TGG | + | chr5_2:64745235-64745254 | Msa0782090:intron | 40.0% | |
TTACATACATACCTGAGCTG+AGG | - | chr5_2:64745284-64745303 | None:intergenic | 40.0% | |
CTCAGGTATGTATGTAAGAG+TGG | + | chr5_2:64745287-64745306 | Msa0782090:intron | 40.0% | |
ATCTTCTCATCCTGTTTAGC+AGG | + | chr5_2:64745382-64745401 | Msa0782090:intron | 40.0% | |
TCAGCTCAATCAAATCGTTG+AGG | + | chr5_2:64745447-64745466 | Msa0782090:CDS | 40.0% | |
AGAGTTACAGCAAGAGTAAG+TGG | - | chr5_2:64745509-64745528 | None:intergenic | 40.0% | |
! | ACAGAATACACACTTTGGAG+TGG | - | chr5_2:64745657-64745676 | None:intergenic | 40.0% |
!!! | AAGAATCTGCTTTTTCCCGT+TGG | + | chr5_2:64745783-64745802 | Msa0782090:intron | 40.0% |
! | TTGGTCTTCCCAGTCTTATA+AGG | + | chr5_2:64745936-64745955 | Msa0782090:CDS | 40.0% |
ACTAATATCATGTCCGATGC+TGG | + | chr5_2:64745964-64745983 | Msa0782090:CDS | 40.0% | |
CTAATATCATGTCCGATGCT+GGG | + | chr5_2:64745965-64745984 | Msa0782090:CDS | 40.0% | |
ATGAACAATGAACCCAGCAT+CGG | - | chr5_2:64745980-64745999 | None:intergenic | 40.0% | |
!! | TGAAGTCAAGGTTTTAGCAG+TGG | - | chr5_2:64746008-64746027 | None:intergenic | 40.0% |
TAGAAGGGGAGAAATAGTTC+AGG | + | chr5_2:64746099-64746118 | Msa0782090:CDS | 40.0% | |
ATGAAACGGGTAGTATACAC+TGG | - | chr5_2:64746201-64746220 | None:intergenic | 40.0% | |
AGTCCTCTTGCAAATGAAAC+GGG | - | chr5_2:64746214-64746233 | None:intergenic | 40.0% | |
CAGTCCTCTTGCAAATGAAA+CGG | - | chr5_2:64746215-64746234 | None:intergenic | 40.0% | |
! | TGCAAGAGGACTGGTAAAAT+TGG | + | chr5_2:64746222-64746241 | Msa0782090:CDS | 40.0% |
CCAAAACAGGAAGCTCAATT+TGG | - | chr5_2:64746324-64746343 | None:intergenic | 40.0% | |
! | CCAAATTGAGCTTCCTGTTT+TGG | + | chr5_2:64746321-64746340 | Msa0782090:CDS | 40.0% |
GGACATATGGCGATCATATT+TGG | - | chr5_2:64746370-64746389 | None:intergenic | 40.0% | |
! | CATGTTGCATGGTAGTTTTC+TGG | - | chr5_2:64746391-64746410 | None:intergenic | 40.0% |
ACATCGTTCATGACAAGAAG+TGG | - | chr5_2:64746424-64746443 | None:intergenic | 40.0% | |
CTTCTTGTCATGAACGATGT+TGG | + | chr5_2:64746424-64746443 | Msa0782090:CDS | 40.0% | |
AAGACAATGAGAGGGTGAAA+AGG | - | chr5_2:64746525-64746544 | None:intergenic | 40.0% | |
AGTATGCTATTACAGGACGA+AGG | + | chr5_2:64746639-64746658 | Msa0782090:intron | 40.0% | |
CTTCTTGTCCATTCTCACTT+GGG | - | chr5_2:64746755-64746774 | None:intergenic | 40.0% | |
ACTTCTTGTCCATTCTCACT+TGG | - | chr5_2:64746756-64746775 | None:intergenic | 40.0% | |
ATGGACAAGAAGTGATATCC+TGG | + | chr5_2:64746763-64746782 | Msa0782090:CDS | 40.0% | |
ACACTTAAGGTCTTCTAACC+AGG | - | chr5_2:64746784-64746803 | None:intergenic | 40.0% | |
AACTGTGAGAAGCAAACTTG+AGG | - | chr5_2:64747032-64747051 | None:intergenic | 40.0% | |
!! | TTCCAGTTCTGGAAACACAT+GGG | - | chr5_2:64747114-64747133 | None:intergenic | 40.0% |
!! | ATTCCAGTTCTGGAAACACA+TGG | - | chr5_2:64747115-64747134 | None:intergenic | 40.0% |
AGGGTAAGATATTCCAGTTC+TGG | - | chr5_2:64747125-64747144 | None:intergenic | 40.0% | |
CTAGACTAGAGTCTTGATTG+AGG | - | chr5_2:64747145-64747164 | None:intergenic | 40.0% | |
! | CAAGTGTTTAAAGTTGGTCC+TGG | + | chr5_2:64747167-64747186 | Msa0782090:CDS | 40.0% |
TCCCTTGACATACATCATTC+AGG | - | chr5_2:64747262-64747281 | None:intergenic | 40.0% | |
! | TCAGACACTGACCAATCTTT+TGG | + | chr5_2:64747292-64747311 | Msa0782090:CDS | 40.0% |
! | CATGCTACAAAGCTTTGATC+GGG | + | chr5_2:64747364-64747383 | Msa0782090:CDS | 40.0% |
! | ATGCTACAAAGCTTTGATCG+GGG | + | chr5_2:64747365-64747384 | Msa0782090:CDS | 40.0% |
TTATGTCGTGTAAGTGTGGA+CGG | - | chr5_2:64747495-64747514 | None:intergenic | 40.0% | |
CAACTTATGTCGTGTAAGTG+TGG | - | chr5_2:64747499-64747518 | None:intergenic | 40.0% | |
TCCTTTACCAAACTTGACAG+AGG | + | chr5_2:64747612-64747631 | Msa0782090:CDS | 40.0% | |
ACCTCTGTCAAGTTTGGTAA+AGG | - | chr5_2:64747616-64747635 | None:intergenic | 40.0% | |
TATCGTACCTCTGTCAAGTT+TGG | - | chr5_2:64747622-64747641 | None:intergenic | 40.0% | |
TTTACCGCAGAATGAAATCG+TGG | + | chr5_2:64747844-64747863 | Msa0782090:intron | 40.0% | |
TCCTCCAACACTGTGAAAAA+GGG | - | chr5_2:64747930-64747949 | None:intergenic | 40.0% | |
TTCCTCCAACACTGTGAAAA+AGG | - | chr5_2:64747931-64747950 | None:intergenic | 40.0% | |
! | ATTCTCCAAGTGGCTTTTGT+TGG | - | chr5_2:64748048-64748067 | None:intergenic | 40.0% |
GTACTTACAGATTCTCCAAG+TGG | - | chr5_2:64748058-64748077 | None:intergenic | 40.0% | |
GTACAGTATATACGTTCAGC+TGG | - | chr5_2:64748108-64748127 | None:intergenic | 40.0% | |
!!! | GGTTAGCCACAACAGTTTTT+TGG | - | chr5_2:64748978-64748997 | None:intergenic | 40.0% |
CCTTCATCATACTCTTCCAT+AGG | - | chr5_2:64749132-64749151 | None:intergenic | 40.0% | |
! | CCTATGGAAGAGTATGATGA+AGG | + | chr5_2:64749129-64749148 | Msa0782090:CDS | 40.0% |
CACTTCAGAAACACAAAGTG+TGG | - | chr5_2:64749163-64749182 | None:intergenic | 40.0% | |
AGAAGTTAAGAGCCGTTAGA+AGG | - | chr5_2:64749284-64749303 | None:intergenic | 40.0% | |
TATAGGCTACAAAACGGAGT+TGG | + | chr5_2:64749611-64749630 | Msa0782090:CDS | 40.0% | |
AGCTCGGCAACAAATATTTG+AGG | + | chr5_2:64749680-64749699 | Msa0782090:CDS | 40.0% | |
CAGGATTTCTTGCAACAATG+TGG | - | chr5_2:64749749-64749768 | None:intergenic | 40.0% | |
GATGATTGAGAAACTCGTCC+TGG | - | chr5_2:64744269-64744288 | None:intergenic | 45.0% | |
TAATGCCGCGATCAAGGATT+TGG | + | chr5_2:64744323-64744342 | Msa0782090:CDS | 45.0% | |
GATCAAGGATTTGGCCGAAA+AGG | + | chr5_2:64744332-64744351 | Msa0782090:CDS | 45.0% | |
! | ACACAAGACCTCTGCCTTTT+CGG | - | chr5_2:64744349-64744368 | None:intergenic | 45.0% |
!! | TGTATAGCAGGTATTGAGGG+AGG | + | chr5_2:64744366-64744385 | Msa0782090:CDS | 45.0% |
GCTTCTGATACGTGATTCTG+AGG | + | chr5_2:64744440-64744459 | Msa0782090:CDS | 45.0% | |
AATGGTCAAATGCCTCTTGG+TGG | + | chr5_2:64744570-64744589 | Msa0782090:CDS | 45.0% | |
GGCCTTGAGCTAAAGTGATT+GGG | - | chr5_2:64744842-64744861 | None:intergenic | 45.0% | |
AGGCCTTGAGCTAAAGTGAT+TGG | - | chr5_2:64744843-64744862 | None:intergenic | 45.0% | |
CCAAACACTCCAGTTGTACA+AGG | - | chr5_2:64744863-64744882 | None:intergenic | 45.0% | |
! | CCTTGTACAACTGGAGTGTT+TGG | + | chr5_2:64744860-64744879 | Msa0782090:CDS | 45.0% |
CGGATTGTTGTGTAAAGCCA+TGG | - | chr5_2:64745102-64745121 | None:intergenic | 45.0% | |
TTCTCATCCTGTTTAGCAGG+AGG | + | chr5_2:64745385-64745404 | Msa0782090:intron | 45.0% | |
TCTCATCCTGTTTAGCAGGA+GGG | + | chr5_2:64745386-64745405 | Msa0782090:intron | 45.0% | |
GTGGATGTTTGTGTACCTGA+GGG | - | chr5_2:64745490-64745509 | None:intergenic | 45.0% | |
AGTGGATGTTTGTGTACCTG+AGG | - | chr5_2:64745491-64745510 | None:intergenic | 45.0% | |
!! | CTACTGTGCCACTACTTTTC+AGG | + | chr5_2:64745908-64745927 | Msa0782090:intron | 45.0% |
CTACCCGTTTCATTTGCAAG+AGG | + | chr5_2:64746208-64746227 | Msa0782090:CDS | 45.0% | |
CGTTTCATTTGCAAGAGGAC+TGG | + | chr5_2:64746213-64746232 | Msa0782090:CDS | 45.0% | |
ACCACTAGGATCTTCAACAG+AGG | - | chr5_2:64746942-64746961 | None:intergenic | 45.0% | |
GGTAGAACAGTGTGAGGAAT+TGG | + | chr5_2:64746959-64746978 | Msa0782090:CDS | 45.0% | |
AGAAGCAAACTTGAGGACTC+TGG | - | chr5_2:64747025-64747044 | None:intergenic | 45.0% | |
ATCCCATGTGTTTCCAGAAC+TGG | + | chr5_2:64747109-64747128 | Msa0782090:CDS | 45.0% | |
CCTTCCACGATTTCATTCTG+CGG | - | chr5_2:64747851-64747870 | None:intergenic | 45.0% | |
!! | ACCCTTTTTCACAGTGTTGG+AGG | + | chr5_2:64747926-64747945 | Msa0782090:intron | 45.0% |
ATGAGCCAACAAAAGCCACT+TGG | + | chr5_2:64748040-64748059 | Msa0782090:CDS | 45.0% | |
ATAGAGGGCCTAAGCATTCA+AGG | + | chr5_2:64748542-64748561 | Msa0782090:CDS | 45.0% | |
TAGAGGGCCTAAGCATTCAA+GGG | + | chr5_2:64748543-64748562 | Msa0782090:CDS | 45.0% | |
TAGAACCCCCTTGAATGCTT+AGG | - | chr5_2:64748553-64748572 | None:intergenic | 45.0% | |
TCTTGTGCAGAGAGTTGAGA+AGG | + | chr5_2:64748662-64748681 | Msa0782090:intron | 45.0% | |
AGTTGAGAAGGCTACTGAAG+AGG | + | chr5_2:64748674-64748693 | Msa0782090:CDS | 45.0% | |
TGGGCTTGATTGTGAGCAAT+CGG | - | chr5_2:64748751-64748770 | None:intergenic | 45.0% | |
! | GAAGCTGATTTCATACTGGC+AGG | - | chr5_2:64749025-64749044 | None:intergenic | 45.0% |
! | GGCTGAAGCTGATTTCATAC+TGG | - | chr5_2:64749029-64749048 | None:intergenic | 45.0% |
GGCCAATGATCTCAATCCTA+TGG | + | chr5_2:64749113-64749132 | Msa0782090:CDS | 45.0% | |
AGACTCTTCCAGGTCAGAAA+GGG | - | chr5_2:64749211-64749230 | None:intergenic | 45.0% | |
AAGACTCTTCCAGGTCAGAA+AGG | - | chr5_2:64749212-64749231 | None:intergenic | 45.0% | |
TAACAGCCTTCGCCTTCTAA+CGG | + | chr5_2:64749269-64749288 | Msa0782090:CDS | 45.0% | |
TCTTGGATGATGCTCAACAG+AGG | + | chr5_2:64749502-64749521 | Msa0782090:CDS | 45.0% | |
CTTGGATGATGCTCAACAGA+GGG | + | chr5_2:64749503-64749522 | Msa0782090:CDS | 45.0% | |
! | ACAGAGGGAAGCAGCTTTAA+AGG | + | chr5_2:64749518-64749537 | Msa0782090:CDS | 45.0% |
AAACGGAGTTGGAGAATGTG+AGG | + | chr5_2:64749622-64749641 | Msa0782090:CDS | 45.0% | |
GAGAAACTCGTCCTGGAAAC+CGG | - | chr5_2:64744262-64744281 | None:intergenic | 50.0% | |
TTCGGCCAAATCCTTGATCG+CGG | - | chr5_2:64744331-64744350 | None:intergenic | 50.0% | |
! | GCAGAGGTCTTGTGTATAGC+AGG | + | chr5_2:64744354-64744373 | Msa0782090:CDS | 50.0% |
GGTTGACACTTGTCTGATCG+AGG | + | chr5_2:64744476-64744495 | Msa0782090:CDS | 50.0% | |
GACACTTGTCTGATCGAGGT+AGG | + | chr5_2:64744480-64744499 | Msa0782090:CDS | 50.0% | |
TGCTCAAAATCTGGCGCAAC+TGG | + | chr5_2:64744665-64744684 | Msa0782090:CDS | 50.0% | |
! | TGTTAGAGAGTGTGGTGTGC+TGG | + | chr5_2:64744806-64744825 | Msa0782090:CDS | 50.0% |
! | AGCTCAAGGCCTTGTACAAC+TGG | + | chr5_2:64744851-64744870 | Msa0782090:CDS | 50.0% |
GATCATTGAGCTTTCTGCCC+TGG | + | chr5_2:64744944-64744963 | Msa0782090:CDS | 50.0% | |
TGGAGAATCTACCTCAGCTC+AGG | + | chr5_2:64745270-64745289 | Msa0782090:intron | 50.0% | |
ATTGGCACTGCAATTCCCTC+AGG | + | chr5_2:64745472-64745491 | Msa0782090:CDS | 50.0% | |
GCAAAGACGAGCATGTTGCA+TGG | - | chr5_2:64746402-64746421 | None:intergenic | 50.0% | |
AAGGGAGTCCCAAGTGAGAA+TGG | + | chr5_2:64746744-64746763 | Msa0782090:CDS | 50.0% | |
CAGGACTCTCAAGACAGAGA+TGG | - | chr5_2:64746919-64746938 | None:intergenic | 50.0% | |
CTAGGATCTTCAACAGAGGC+AGG | - | chr5_2:64746938-64746957 | None:intergenic | 50.0% | |
GCCTCTGTTGAAGATCCTAG+TGG | + | chr5_2:64746938-64746957 | Msa0782090:CDS | 50.0% | |
CCTCACACTGTTCTACCACT+AGG | - | chr5_2:64746956-64746975 | None:intergenic | 50.0% | |
CCTAGTGGTAGAACAGTGTG+AGG | + | chr5_2:64746953-64746972 | Msa0782090:CDS | 50.0% | |
CTGGAAACACATGGGATGTG+CGG | - | chr5_2:64747106-64747125 | None:intergenic | 50.0% | |
TTGGTCCTGGTGTGAGAGAT+GGG | + | chr5_2:64747180-64747199 | Msa0782090:CDS | 50.0% | |
CCGCAGAATGAAATCGTGGA+AGG | + | chr5_2:64747848-64747867 | Msa0782090:intron | 50.0% | |
AGAGGGCCTAAGCATTCAAG+GGG | + | chr5_2:64748544-64748563 | Msa0782090:CDS | 50.0% | |
GTTTCTCGATCTTGCCTCTG+TGG | - | chr5_2:64748864-64748883 | None:intergenic | 50.0% | |
CTGACCTGGAAGAGTCTTTG+AGG | + | chr5_2:64749214-64749233 | Msa0782090:CDS | 50.0% | |
GCATCCTCAAAGACTCTTCC+AGG | - | chr5_2:64749221-64749240 | None:intergenic | 50.0% | |
! | GTCTTTGAGGATGCCTCTGA+AGG | + | chr5_2:64749227-64749246 | Msa0782090:CDS | 50.0% |
TAAGAGCCGTTAGAAGGCGA+AGG | - | chr5_2:64749278-64749297 | None:intergenic | 50.0% | |
GGATTTGGCCGAAAAGGCAG+AGG | + | chr5_2:64744338-64744357 | Msa0782090:CDS | 55.0% | |
GTTGGTCCTGGTGTGAGAGA+TGG | + | chr5_2:64747179-64747198 | Msa0782090:CDS | 55.0% | |
ACTCTCCCATCTCTCACACC+AGG | - | chr5_2:64747188-64747207 | None:intergenic | 55.0% | |
TGGTGTGAGAGATGGGAGAG+TGG | + | chr5_2:64747187-64747206 | Msa0782090:CDS | 55.0% | |
GAGGGCCTAAGCATTCAAGG+GGG | + | chr5_2:64748545-64748564 | Msa0782090:CDS | 55.0% | |
CGAAAAGGCCCTTTCTGACC+TGG | + | chr5_2:64749200-64749219 | Msa0782090:CDS | 55.0% | |
GACCGAAGCTCATCACAACG+AGG | + | chr5_2:64749437-64749456 | Msa0782090:CDS | 55.0% | |
GGCCTCGTTGTGATGAGCTT+CGG | - | chr5_2:64749442-64749461 | None:intergenic | 55.0% | |
AGGCAGCCCTCCTGCTAAAC+AGG | - | chr5_2:64745395-64745414 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 64744252 | 64749951 | 64744252 | ID=Msa0782090;Name=Msa0782090 |
chr5_2 | mRNA | 64744252 | 64749951 | 64744252 | ID=Msa0782090-mRNA-1;Parent=Msa0782090;Name=Msa0782090-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.75|0.66|1|1|1|9|175|1184 |
chr5_2 | exon | 64744252 | 64745194 | 64744252 | ID=Msa0782090-mRNA-1:exon:19423;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64745404 | 64745493 | 64745404 | ID=Msa0782090-mRNA-1:exon:19424;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64745930 | 64746513 | 64745930 | ID=Msa0782090-mRNA-1:exon:19425;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64746654 | 64747386 | 64746654 | ID=Msa0782090-mRNA-1:exon:19426;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64747470 | 64747633 | 64747470 | ID=Msa0782090-mRNA-1:exon:19427;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64748001 | 64748069 | 64748001 | ID=Msa0782090-mRNA-1:exon:19428;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64748530 | 64748622 | 64748530 | ID=Msa0782090-mRNA-1:exon:19429;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64748672 | 64748803 | 64748672 | ID=Msa0782090-mRNA-1:exon:19430;Parent=Msa0782090-mRNA-1 |
chr5_2 | exon | 64749030 | 64749951 | 64749030 | ID=Msa0782090-mRNA-1:exon:19431;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64744252 | 64745194 | 64744252 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64745404 | 64745493 | 64745404 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64745930 | 64746513 | 64745930 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64746654 | 64747386 | 64746654 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64747470 | 64747633 | 64747470 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64748001 | 64748069 | 64748001 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64748530 | 64748622 | 64748530 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64748672 | 64748803 | 64748672 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | CDS | 64749030 | 64749776 | 64749030 | ID=Msa0782090-mRNA-1:cds;Parent=Msa0782090-mRNA-1 |
chr5_2 | three_prime_UTR | 64749777 | 64749951 | 64749777 | ID=Msa0782090-mRNA-1:three_prime_utr;Parent=Msa0782090-mRNA-1 |
Gene Sequence |
Protein sequence |