Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038200 | XP_024627340.1 | 96.571 | 875 | 27 | 3 | 1 | 874 | 1 | 873 | 0.0 | 1728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038200 | sp|F4HXQ7|MYOB1_ARATH | 43.266 | 349 | 151 | 6 | 415 | 760 | 766 | 1070 | 1.20e-68 | 251 |
| Msa1038200 | sp|F4HXQ7|MYOB1_ARATH | 45.614 | 228 | 101 | 9 | 19 | 243 | 4 | 211 | 4.85e-42 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038200 | A0A072U5Z8 | 96.571 | 875 | 27 | 3 | 1 | 874 | 1 | 873 | 0.0 | 1728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028410 | Msa1038200 | -0.809886 | 1.515758e-50 | -8.615850e-47 |
| Msa0042210 | Msa1038200 | -0.801573 | 8.449962e-49 | -8.615850e-47 |
| Msa0044700 | Msa1038200 | -0.807516 | 4.865777e-50 | -8.615850e-47 |
| Msa0046800 | Msa1038200 | -0.836921 | 7.048414e-57 | -8.615850e-47 |
| Msa0058140 | Msa1038200 | -0.814144 | 1.789257e-51 | -8.615850e-47 |
| Msa0064490 | Msa1038200 | -0.817457 | 3.265542e-52 | -8.615850e-47 |
| Msa0066350 | Msa1038200 | 0.808778 | 2.619992e-50 | -8.615850e-47 |
| Msa0075080 | Msa1038200 | -0.805684 | 1.185513e-49 | -8.615850e-47 |
| Msa0102290 | Msa1038200 | -0.811414 | 7.085728e-51 | -8.615850e-47 |
| Msa0608720 | Msa1038200 | -0.804256 | 2.357590e-49 | -8.615850e-47 |
| Msa0612950 | Msa1038200 | -0.817062 | 4.006818e-52 | -8.615850e-47 |
| Msa0649140 | Msa1038200 | -0.813950 | 1.974487e-51 | -8.615850e-47 |
| Msa0711860 | Msa1038200 | -0.816117 | 6.524682e-52 | -8.615850e-47 |
| Msa0713570 | Msa1038200 | -0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0729130 | Msa1038200 | -0.815444 | 9.214332e-52 | -8.615850e-47 |
| Msa0752290 | Msa1038200 | -0.843687 | 1.201989e-58 | -8.615850e-47 |
| Msa0753040 | Msa1038200 | -0.806176 | 9.340833e-50 | -8.615850e-47 |
| Msa0755550 | Msa1038200 | -0.809265 | 2.060636e-50 | -8.615850e-47 |
| Msa0762860 | Msa1038200 | -0.801192 | 1.011011e-48 | -8.615850e-47 |
| Msa0762900 | Msa1038200 | -0.802113 | 6.544888e-49 | -8.615850e-47 |
| Msa0772530 | Msa1038200 | -0.806419 | 8.301072e-50 | -8.615850e-47 |
| Msa0788490 | Msa1038200 | -0.800746 | 1.247190e-48 | -8.615850e-47 |
| Msa0793590 | Msa1038200 | -0.804077 | 2.568743e-49 | -8.615850e-47 |
| Msa0832270 | Msa1038200 | -0.807333 | 5.319678e-50 | -8.615850e-47 |
| Msa0833980 | Msa1038200 | -0.815060 | 1.121682e-51 | -8.615850e-47 |
| Msa0122930 | Msa1038200 | -0.801946 | 7.082819e-49 | -8.615850e-47 |
| Msa0124460 | Msa1038200 | -0.804738 | 1.870408e-49 | -8.615850e-47 |
| Msa0145590 | Msa1038200 | -0.819807 | 9.566529e-53 | -8.615850e-47 |
| Msa0167570 | Msa1038200 | -0.811814 | 5.799738e-51 | -8.615850e-47 |
| Msa0168470 | Msa1038200 | -0.810039 | 1.405467e-50 | -8.615850e-47 |
| Msa0182610 | Msa1038200 | -0.807331 | 5.326223e-50 | -8.615850e-47 |
| Msa0191180 | Msa1038200 | -0.804908 | 1.723190e-49 | -8.615850e-47 |
| Msa0224180 | Msa1038200 | -0.808342 | 3.246971e-50 | -8.615850e-47 |
| Msa0382050 | Msa1038200 | -0.805955 | 1.039420e-49 | -8.615850e-47 |
| Msa0386310 | Msa1038200 | -0.804686 | 1.918007e-49 | -8.615850e-47 |
| Msa0390760 | Msa1038200 | -0.808511 | 2.988632e-50 | -8.615850e-47 |
| Msa0412470 | Msa1038200 | -0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0431550 | Msa1038200 | -0.820234 | 7.639276e-53 | -8.615850e-47 |
| Msa0438990 | Msa1038200 | -0.813327 | 2.707338e-51 | -8.615850e-47 |
| Msa0441670 | Msa1038200 | -0.802078 | 6.653321e-49 | -8.615850e-47 |
| Msa0444770 | Msa1038200 | -0.807272 | 5.482329e-50 | -8.615850e-47 |
| Msa0474290 | Msa1038200 | -0.815373 | 9.556385e-52 | -8.615850e-47 |
| Msa0476560 | Msa1038200 | -0.815102 | 1.098102e-51 | -8.615850e-47 |
| Msa0995130 | Msa1038200 | -0.805440 | 1.333783e-49 | -8.615850e-47 |
| Msa1013560 | Msa1038200 | -0.842631 | 2.298400e-58 | -8.615850e-47 |
| Msa1038200 | Msa1045750 | -0.803175 | 3.952094e-49 | -8.615850e-47 |
| Msa1038200 | Msa1047390 | -0.816786 | 4.620881e-52 | -8.615850e-47 |
| Msa1038200 | Msa1052800 | -0.819257 | 1.277379e-52 | -8.615850e-47 |
| Msa1038200 | Msa1054620 | -0.806428 | 8.264205e-50 | -8.615850e-47 |
| Msa1038200 | Msa1058550 | -0.805724 | 1.162412e-49 | -8.615850e-47 |
| Msa1038200 | Msa1076120 | -0.817118 | 3.892125e-52 | -8.615850e-47 |
| Msa1038200 | Msa1129510 | -0.804241 | 2.374513e-49 | -8.615850e-47 |
| Msa1038200 | Msa1129540 | 0.899677 | 1.563806e-77 | -8.615850e-47 |
| Msa1038200 | Msa1163130 | -0.818472 | 1.925716e-52 | -8.615850e-47 |
| Msa1038200 | Msa1163230 | -0.830743 | 2.473108e-55 | -8.615850e-47 |
| Msa1038200 | Msa1203320 | -0.810029 | 1.412507e-50 | -8.615850e-47 |
| Msa1038200 | Msa1208750 | -0.811035 | 8.562642e-51 | -8.615850e-47 |
| Msa1038200 | Msa1225280 | -0.829395 | 5.272664e-55 | -8.615850e-47 |
| Msa1038200 | Msa1239190 | 0.803879 | 2.824192e-49 | -8.615850e-47 |
| Msa1038200 | Msa1244940 | -0.813454 | 2.539201e-51 | -8.615850e-47 |
| Msa1038200 | Msa1250490 | -0.805719 | 1.165593e-49 | -8.615850e-47 |
| Msa1038200 | Msa1297550 | -0.804023 | 2.635052e-49 | -8.615850e-47 |
| Msa1038200 | Msa1303040 | -0.801718 | 7.889885e-49 | -8.615850e-47 |
| Msa1038200 | Msa1303690 | -0.801320 | 9.520622e-49 | -8.615850e-47 |
| Msa1038200 | Msa1312800 | -0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa1038200 | Msa1312840 | -0.800664 | 1.295859e-48 | -8.615850e-47 |
| Msa1038200 | Msa1325260 | -0.819804 | 9.581115e-53 | -8.615850e-47 |
| Msa1038200 | Msa1325270 | -0.842400 | 2.647158e-58 | -8.615850e-47 |
| Msa1038200 | Msa1350130 | -0.810930 | 9.020904e-51 | -8.615850e-47 |
| Msa1038200 | Msa1352530 | 0.932006 | 1.625147e-94 | -8.615850e-47 |
| Msa1038200 | Msa1363170 | -0.804943 | 1.694446e-49 | -8.615850e-47 |
| Msa1038200 | Msa1388010 | -0.818109 | 2.326552e-52 | -8.615850e-47 |
| Msa1038200 | Msa1390330 | -0.808146 | 3.574957e-50 | -8.615850e-47 |
| Msa1038200 | Msa1416330 | 0.810943 | 8.966107e-51 | -8.615850e-47 |
| Msa1038200 | Msa1419760 | -0.820993 | 5.112353e-53 | -8.615850e-47 |
| Msa1038200 | Msa1455560 | -0.800290 | 1.544909e-48 | -8.615850e-47 |
| Msa1038200 | Msa1462700 | -0.803879 | 2.824192e-49 | -8.615850e-47 |
| Msa0255770 | Msa1038200 | -0.807424 | 5.089897e-50 | -8.615850e-47 |
| Msa0298820 | Msa1038200 | -0.808775 | 2.623572e-50 | -8.615850e-47 |
| Msa0313550 | Msa1038200 | -0.813260 | 2.800285e-51 | -8.615850e-47 |
| Msa0341950 | Msa1038200 | -0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0492330 | Msa1038200 | -0.820748 | 5.822631e-53 | -8.615850e-47 |
| Msa0498250 | Msa1038200 | -0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0503220 | Msa1038200 | 0.807921 | 3.990151e-50 | -8.615850e-47 |
| Msa0504740 | Msa1038200 | -0.821035 | 5.001530e-53 | -8.615850e-47 |
| Msa0514630 | Msa1038200 | -0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0517200 | Msa1038200 | 0.802285 | 6.031113e-49 | -8.615850e-47 |
| Msa0518720 | Msa1038200 | -0.827067 | 1.920065e-54 | -8.615850e-47 |
| Msa0527420 | Msa1038200 | -0.815012 | 1.149454e-51 | -8.615850e-47 |
| Msa0562040 | Msa1038200 | -0.807863 | 4.106412e-50 | -8.615850e-47 |
| Msa0578400 | Msa1038200 | -0.807292 | 5.427173e-50 | -8.615850e-47 |
| Msa0842660 | Msa1038200 | -0.813953 | 1.971334e-51 | -8.615850e-47 |
| Msa0858250 | Msa1038200 | -0.807592 | 4.688464e-50 | -8.615850e-47 |
| Msa0866320 | Msa1038200 | -0.847086 | 1.444129e-59 | -8.615850e-47 |
| Msa0933320 | Msa1038200 | -0.806458 | 8.146364e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038200 | MtrunA17_Chr7g0274311 | 96.571 | 875 | 27 | 3 | 1 | 874 | 1 | 873 | 0.0 | 1728 |
| Msa1038200 | MtrunA17_Chr1g0184441 | 33.990 | 762 | 394 | 26 | 11 | 727 | 14 | 711 | 1.39e-90 | 306 |
| Msa1038200 | MtrunA17_Chr5g0434681 | 34.278 | 388 | 230 | 8 | 505 | 867 | 578 | 965 | 4.70e-32 | 134 |
| Msa1038200 | MtrunA17_Chr5g0434681 | 37.975 | 158 | 75 | 3 | 20 | 169 | 16 | 158 | 6.29e-26 | 115 |
| Msa1038200 | MtrunA17_Chr8g0376151 | 56.391 | 133 | 55 | 2 | 507 | 636 | 563 | 695 | 3.18e-29 | 125 |
| Msa1038200 | MtrunA17_Chr8g0376151 | 47.887 | 71 | 36 | 1 | 44 | 113 | 40 | 110 | 1.37e-14 | 78.6 |
| Msa1038200 | MtrunA17_Chr3g0093241 | 30.469 | 256 | 137 | 11 | 29 | 270 | 25 | 253 | 1.09e-23 | 105 |
| Msa1038200 | MtrunA17_Chr3g0093241 | 59.000 | 100 | 41 | 0 | 538 | 637 | 331 | 430 | 5.40e-22 | 100 |
| Msa1038200 | MtrunA17_Chr4g0059771 | 34.615 | 156 | 92 | 4 | 25 | 171 | 21 | 175 | 4.86e-21 | 97.8 |
| Msa1038200 | MtrunA17_Chr4g0059771 | 52.846 | 123 | 58 | 0 | 515 | 637 | 306 | 428 | 1.99e-18 | 89.7 |
| Msa1038200 | MtrunA17_Chr2g0307041 | 39.815 | 108 | 61 | 1 | 530 | 637 | 12 | 115 | 7.94e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038200 | AT1G08800.2 | 43.266 | 349 | 151 | 6 | 415 | 760 | 766 | 1070 | 1.22e-69 | 251 |
| Msa1038200 | AT1G08800.2 | 45.614 | 228 | 101 | 9 | 19 | 243 | 4 | 211 | 4.93e-43 | 170 |
| Msa1038200 | AT1G08800.4 | 43.266 | 349 | 151 | 6 | 415 | 760 | 766 | 1070 | 1.22e-69 | 251 |
| Msa1038200 | AT1G08800.4 | 45.614 | 228 | 101 | 9 | 19 | 243 | 4 | 211 | 4.93e-43 | 170 |
| Msa1038200 | AT1G08800.3 | 43.266 | 349 | 151 | 6 | 415 | 760 | 766 | 1070 | 1.22e-69 | 251 |
| Msa1038200 | AT1G08800.3 | 45.614 | 228 | 101 | 9 | 19 | 243 | 4 | 211 | 4.93e-43 | 170 |
| Msa1038200 | AT1G08800.1 | 43.266 | 349 | 151 | 6 | 415 | 760 | 766 | 1070 | 1.22e-69 | 251 |
| Msa1038200 | AT1G08800.1 | 45.614 | 228 | 101 | 9 | 19 | 243 | 4 | 211 | 4.93e-43 | 170 |
| Msa1038200 | AT2G30690.1 | 66.102 | 118 | 40 | 0 | 527 | 644 | 602 | 719 | 9.97e-41 | 161 |
| Msa1038200 | AT2G30690.1 | 33.197 | 244 | 123 | 10 | 25 | 254 | 19 | 236 | 8.30e-28 | 120 |
| Msa1038200 | AT2G30690.2 | 66.102 | 118 | 40 | 0 | 527 | 644 | 602 | 719 | 9.97e-41 | 161 |
| Msa1038200 | AT2G30690.2 | 33.197 | 244 | 123 | 10 | 25 | 254 | 19 | 236 | 8.30e-28 | 120 |
| Msa1038200 | AT1G70750.1 | 31.931 | 404 | 228 | 12 | 486 | 869 | 365 | 741 | 4.52e-35 | 144 |
| Msa1038200 | AT1G70750.1 | 40.566 | 106 | 54 | 3 | 20 | 117 | 16 | 120 | 2.12e-14 | 78.2 |
| Msa1038200 | AT5G16720.1 | 31.200 | 375 | 203 | 10 | 510 | 864 | 322 | 661 | 2.48e-28 | 122 |
| Msa1038200 | AT5G16720.1 | 28.889 | 225 | 111 | 6 | 3 | 215 | 2 | 189 | 4.14e-21 | 99.4 |
| Msa1038200 | AT1G74830.1 | 53.982 | 113 | 52 | 0 | 525 | 637 | 289 | 401 | 1.71e-23 | 106 |
| Msa1038200 | AT1G74830.1 | 34.706 | 170 | 87 | 5 | 25 | 171 | 40 | 208 | 6.08e-23 | 104 |
| Msa1038200 | AT1G18990.1 | 56.604 | 106 | 46 | 0 | 532 | 637 | 295 | 400 | 1.29e-21 | 100 |
| Msa1038200 | AT1G18990.1 | 44.681 | 94 | 47 | 3 | 42 | 134 | 41 | 130 | 3.88e-15 | 79.7 |
| Msa1038200 | AT5G06560.1 | 27.602 | 221 | 137 | 3 | 476 | 684 | 20 | 229 | 5.00e-14 | 76.3 |
| Msa1038200 | AT4G13630.2 | 37.226 | 137 | 85 | 1 | 509 | 645 | 194 | 329 | 5.99e-13 | 73.2 |
| Msa1038200 | AT4G13630.1 | 37.226 | 137 | 85 | 1 | 509 | 645 | 194 | 329 | 5.99e-13 | 73.2 |
| Msa1038200 | AT3G54740.3 | 33.824 | 136 | 81 | 2 | 549 | 675 | 82 | 217 | 1.23e-11 | 68.2 |
| Msa1038200 | AT3G54740.6 | 33.824 | 136 | 81 | 2 | 549 | 675 | 82 | 217 | 1.23e-11 | 68.2 |
| Msa1038200 | AT3G54740.2 | 33.824 | 136 | 81 | 2 | 549 | 675 | 82 | 217 | 1.23e-11 | 68.2 |
| Msa1038200 | AT3G54740.5 | 33.824 | 136 | 81 | 2 | 549 | 675 | 82 | 217 | 1.23e-11 | 68.2 |
| Msa1038200 | AT3G54740.8 | 33.824 | 136 | 81 | 2 | 549 | 675 | 34 | 169 | 1.52e-11 | 67.8 |
| Msa1038200 | AT3G54740.1 | 33.824 | 136 | 81 | 2 | 549 | 675 | 34 | 169 | 1.52e-11 | 67.8 |
| Msa1038200 | AT3G54740.7 | 33.824 | 136 | 81 | 2 | 549 | 675 | 34 | 169 | 1.52e-11 | 67.8 |
| Msa1038200 | AT3G54740.4 | 33.824 | 136 | 81 | 2 | 549 | 675 | 34 | 169 | 1.52e-11 | 67.8 |
Find 182 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGAACGTTTGAAGAAAT+TGG | 0.165586 | 7_1:-75027504 | Msa1038200:CDS |
| ACAGAAAAGAGGTTATTATT+TGG | 0.203314 | 7_1:-75029727 | Msa1038200:CDS |
| TCATCCAGGTTACAAGAAAA+TGG | 0.214605 | 7_1:-75025763 | Msa1038200:three_prime_UTR |
| TCAGCTTTGTCATAGATATT+AGG | 0.235113 | 7_1:+75027611 | None:intergenic |
| GAACTAACATTGTTTGTATA+TGG | 0.240257 | 7_1:-75025533 | Msa1038200:three_prime_UTR |
| GCTGTTGATTTCAATGATTC+AGG | 0.244211 | 7_1:-75029384 | Msa1038200:CDS |
| AAGTTTCATCTTCTTCTTCT+AGG | 0.263920 | 7_1:-75029929 | Msa1038200:CDS |
| TCACCAAGATCTAGCAAATT+AGG | 0.270537 | 7_1:+75028379 | None:intergenic |
| CTTGCAAACCGGAGGTTTCT+TGG | 0.277905 | 7_1:+75027304 | None:intergenic |
| TATACCGTCATCATCTGATA+TGG | 0.279522 | 7_1:+75029206 | None:intergenic |
| CTCACCAGTCTCAGGATAAT+TGG | 0.280875 | 7_1:-75027454 | Msa1038200:CDS |
| CCGGCTATTGCTTGGTAAAT+CGG | 0.294179 | 7_1:-75029559 | Msa1038200:CDS |
| TTGTTCATGTACCTTCTTCC+TGG | 0.308111 | 7_1:+75025842 | None:intergenic |
| AAGAGTTCCATGTGAATATA+TGG | 0.311089 | 7_1:-75029142 | Msa1038200:CDS |
| GTTGCTTGAGGATGTATATA+AGG | 0.322444 | 7_1:-75027032 | Msa1038200:intron |
| TGATTTGACTAGAAAGAATA+TGG | 0.323167 | 7_1:-75029964 | Msa1038200:exon |
| TTTAGCTTCTACTGGAAGTT+TGG | 0.323708 | 7_1:-75027222 | Msa1038200:CDS |
| CAAAGTAAACCAACCCAAAA+AGG | 0.332256 | 7_1:+75030309 | None:intergenic |
| CCTGAGACTGGTGAGAATTC+AGG | 0.333607 | 7_1:+75027462 | None:intergenic |
| CTTGTTGTAGTGAGAAATTC+CGG | 0.335872 | 7_1:-75029458 | Msa1038200:CDS |
| TTCGCTATTCATAGACAATC+TGG | 0.336016 | 7_1:+75028192 | None:intergenic |
| GAAATGAAGGTAAAAGATAT+TGG | 0.340452 | 7_1:-75027695 | Msa1038200:CDS |
| AATCCTAATTTGCTAGATCT+TGG | 0.352539 | 7_1:-75028382 | Msa1038200:CDS |
| AATCCAATGCCGAGACTTCC+CGG | 0.360389 | 7_1:-75029578 | Msa1038200:CDS |
| GGAACATCGTTGAAGGAAAT+AGG | 0.362320 | 7_1:+75028898 | None:intergenic |
| CCTCCGGTTTGCAAGCAAAA+TGG | 0.362677 | 7_1:-75027296 | Msa1038200:CDS |
| TGGCTTCAGCTTTACTTGAA+TGG | 0.372014 | 7_1:-75029872 | Msa1038200:CDS |
| TGATACTGAGTCTGAATTTG+AGG | 0.377119 | 7_1:-75029232 | Msa1038200:CDS |
| GTATCATCTTTCCCGTGAAT+TGG | 0.379249 | 7_1:+75029177 | None:intergenic |
| TTCTCCGGCTTTGATTCGTC+AGG | 0.388551 | 7_1:+75027737 | None:intergenic |
| GATAATGATTTAGCTTCTAC+TGG | 0.392018 | 7_1:-75027230 | Msa1038200:CDS |
| TGGAAGCCTTGCAGCACTTA+AGG | 0.395831 | 7_1:-75027883 | Msa1038200:CDS |
| GACGAAACCGAATCTTTCAT+TGG | 0.397908 | 7_1:+75027368 | None:intergenic |
| TGAAGGACTTAAGTTATTGC+AGG | 0.398234 | 7_1:-75027114 | Msa1038200:CDS |
| CAAAAGAATTACAACATCAT+TGG | 0.399339 | 7_1:-75029892 | Msa1038200:CDS |
| CGATCCTGCGTAATTGTTGC+AGG | 0.399676 | 7_1:+75027078 | None:intergenic |
| GATATTGCTGTCACAATTCT+CGG | 0.403853 | 7_1:-75028254 | Msa1038200:CDS |
| TCTTCCTGGTGGCTAATCAT+TGG | 0.407216 | 7_1:+75025856 | None:intergenic |
| AAATATTCCAATGAAAGATT+CGG | 0.408471 | 7_1:-75027375 | Msa1038200:CDS |
| GTACATGAACAACGGTGAAC+CGG | 0.412461 | 7_1:-75025831 | Msa1038200:three_prime_UTR |
| TTGCCAAGTCAATTCGGTCT+AGG | 0.416167 | 7_1:-75029407 | Msa1038200:CDS |
| CCTGAATTCTCACCAGTCTC+AGG | 0.416604 | 7_1:-75027462 | Msa1038200:CDS |
| CTTGGTCAACATACAGTTGC+CGG | 0.419687 | 7_1:-75029489 | Msa1038200:CDS |
| AAACGAATCTGGTTTGTCTC+TGG | 0.419823 | 7_1:-75028098 | Msa1038200:CDS |
| TGGTATTTGCCAAGTCAATT+CGG | 0.423752 | 7_1:-75029413 | Msa1038200:CDS |
| ATCTGCACAAAGTTTACAAA+TGG | 0.427450 | 7_1:-75027552 | Msa1038200:CDS |
| CGGCTATTGCTTGGTAAATC+GGG | 0.428787 | 7_1:-75029558 | Msa1038200:CDS |
| TGCTTGCAGAACATTGGCTT+GGG | 0.429540 | 7_1:-75028309 | Msa1038200:CDS |
| CACTAGACTGCAGGAAGAAA+AGG | 0.433393 | 7_1:-75027918 | Msa1038200:CDS |
| AAGCTAGCTGTCAGTAATAG+AGG | 0.434545 | 7_1:-75028349 | Msa1038200:CDS |
| AAAACATTAAGTCAGGCAAT+AGG | 0.437389 | 7_1:-75028465 | Msa1038200:CDS |
| TCGCTTGAGAGAAACGAATC+TGG | 0.438552 | 7_1:-75028109 | Msa1038200:CDS |
| TTTGATCATGATCCATTACT+TGG | 0.440915 | 7_1:-75029507 | Msa1038200:CDS |
| TGCCAAGTCAATTCGGTCTA+GGG | 0.447748 | 7_1:-75029406 | Msa1038200:CDS |
| TGAAGGAAATAGGCTCGCTT+GGG | 0.448680 | 7_1:+75028908 | None:intergenic |
| TGAGCAGTCAGAATATGAAT+TGG | 0.448855 | 7_1:-75027852 | Msa1038200:CDS |
| AGAAAAGGCAACGTTACATA+TGG | 0.453577 | 7_1:-75027903 | Msa1038200:CDS |
| TTATACTTCTTCTTCATCTA+CGG | 0.454120 | 7_1:-75030202 | Msa1038200:intron |
| TTCCTGCAGTCTAGTGATCA+TGG | 0.454535 | 7_1:+75027925 | None:intergenic |
| TCTGATGTTACTAACTCTAC+TGG | 0.457443 | 7_1:-75028157 | Msa1038200:CDS |
| GATAAGCTTGTAAATATTCA+AGG | 0.459464 | 7_1:-75029645 | Msa1038200:CDS |
| CCCAGAAAACTCGGAAAAGT+TGG | 0.461420 | 7_1:-75027402 | Msa1038200:CDS |
| TTGAAGGAAATAGGCTCGCT+TGG | 0.461485 | 7_1:+75028907 | None:intergenic |
| CTGGCATGCTTGCAGAACAT+TGG | 0.461821 | 7_1:-75028315 | Msa1038200:CDS |
| AGTGAGAAATTCCGGTTAGA+TGG | 0.461919 | 7_1:-75029450 | Msa1038200:CDS |
| TGCAACAATTACGCAGGATC+GGG | 0.464888 | 7_1:-75027076 | Msa1038200:CDS |
| TTCATTGAAAATGATGAAAG+TGG | 0.465627 | 7_1:-75027650 | Msa1038200:CDS |
| TAGTATGCTCAAGGAAACTA+TGG | 0.465704 | 7_1:+75027159 | None:intergenic |
| CATCCAGGTTACAAGAAAAT+GGG | 0.466838 | 7_1:-75025762 | Msa1038200:three_prime_UTR |
| AGGCTAATAACATCTGAAAC+AGG | 0.470919 | 7_1:-75028445 | Msa1038200:CDS |
| GCAACAGTGGAAAGTGGAAA+TGG | 0.471975 | 7_1:-75028982 | Msa1038200:CDS |
| TGGAACTCTTATATCTTCCT+TGG | 0.473060 | 7_1:+75029155 | None:intergenic |
| TATATACATCCTCAAGCAAC+AGG | 0.475282 | 7_1:+75027035 | None:intergenic |
| TTTGATCATGACCATCTAAC+CGG | 0.481169 | 7_1:+75029439 | None:intergenic |
| CTCTCAAACTCAAGGAAACA+AGG | 0.481916 | 7_1:+75025484 | None:intergenic |
| TGACATTCAACTCATGTCTT+CGG | 0.483737 | 7_1:-75027591 | Msa1038200:CDS |
| GATCTGACTTCCACGAAGCC+CGG | 0.486027 | 7_1:-75029093 | Msa1038200:CDS |
| CAAATTAAATTCAGATGCCA+TGG | 0.486577 | 7_1:-75027342 | Msa1038200:CDS |
| CCGGAGGTTTCTTGGATGAC+GGG | 0.486701 | 7_1:+75027312 | None:intergenic |
| TCTGTTATATTTGATAATGT+AGG | 0.487402 | 7_1:+75028877 | None:intergenic |
| TTCAATGATTCAGGTGTTGT+TGG | 0.491677 | 7_1:-75029375 | Msa1038200:CDS |
| CCGATTTACCAAGCAATAGC+CGG | 0.492472 | 7_1:+75029559 | None:intergenic |
| GAGACTTCCCGGCTATTGCT+TGG | 0.492566 | 7_1:-75029567 | Msa1038200:CDS |
| AGCTGAAGTCCCGGGCTTCG+TGG | 0.493301 | 7_1:+75029083 | None:intergenic |
| CGTGAAGAAAACATTAAGTC+AGG | 0.493949 | 7_1:-75028472 | Msa1038200:CDS |
| GTTAGAAGACTTAGAAGCAA+AGG | 0.496945 | 7_1:-75027783 | Msa1038200:CDS |
| TGACACGTATCAGTAGAAAC+CGG | 0.499725 | 7_1:+75028409 | None:intergenic |
| TAGATCTTCATTAACTCTTG+AGG | 0.503418 | 7_1:+75028279 | None:intergenic |
| AATAGAGGAAGACAATTGTC+TGG | 0.503500 | 7_1:-75028334 | Msa1038200:CDS |
| CGAATCAAAGCCGGAGAACA+TGG | 0.504178 | 7_1:-75027732 | Msa1038200:CDS |
| GAATGCTTTGTATAAAGAGC+TGG | 0.504412 | 7_1:-75027993 | Msa1038200:CDS |
| TAATTCTGAAAATGTTGTAA+AGG | 0.509055 | 7_1:-75027429 | Msa1038200:CDS |
| AAGTACAGAAGCTGAAGTCC+CGG | 0.510760 | 7_1:+75029074 | None:intergenic |
| AAGCAATAGCCGGGAAGTCT+CGG | 0.512519 | 7_1:+75029569 | None:intergenic |
| ATGGTTTGACAGAACTTGAC+TGG | 0.512573 | 7_1:-75028963 | Msa1038200:CDS |
| AGCCATGATCACTAGACTGC+AGG | 0.513907 | 7_1:-75027927 | Msa1038200:CDS |
| ATCTGACTTCCACGAAGCCC+GGG | 0.516689 | 7_1:-75029092 | Msa1038200:CDS |
| TAGCCGGGAAGTCTCGGCAT+TGG | 0.516845 | 7_1:+75029575 | None:intergenic |
| ACCGGAGGTTTCTTGGATGA+CGG | 0.517239 | 7_1:+75027311 | None:intergenic |
| TAATGTAGGAACATCGTTGA+AGG | 0.518278 | 7_1:+75028891 | None:intergenic |
| ACTTTCCACTGTTGCTTCTG+CGG | 0.522511 | 7_1:+75028990 | None:intergenic |
| AAAGACAAGTTGATCATGAC+AGG | 0.522780 | 7_1:-75028024 | Msa1038200:CDS |
| ATACCGTCATCATCTGATAT+GGG | 0.526049 | 7_1:+75029207 | None:intergenic |
| ATGCTTGCAGAACATTGGCT+TGG | 0.526665 | 7_1:-75028310 | Msa1038200:CDS |
| GAAGGTAAAAGATATTGGAT+TGG | 0.527224 | 7_1:-75027690 | Msa1038200:CDS |
| CTGCAACAATTACGCAGGAT+CGG | 0.529463 | 7_1:-75027077 | Msa1038200:CDS |
| TAATGACCTACTTGCTGAGA+AGG | 0.529496 | 7_1:-75027813 | Msa1038200:CDS |
| ATGATTAGCCACCAGGAAGA+AGG | 0.533932 | 7_1:-75025853 | Msa1038200:three_prime_UTR |
| AATGGTGAACTTGAATACTC+TGG | 0.536752 | 7_1:-75027278 | Msa1038200:CDS |
| CTTGCAGCACTTAAGGATGA+TGG | 0.540707 | 7_1:-75027876 | Msa1038200:CDS |
| TCGCTATTCATAGACAATCT+GGG | 0.542836 | 7_1:+75028193 | None:intergenic |
| AGAAGAAGATGAAACTTCAC+TGG | 0.547379 | 7_1:+75029935 | None:intergenic |
| TGTACAGTTGCAACCAGTCA+TGG | 0.548541 | 7_1:+75025803 | None:intergenic |
| TACATGAACAACGGTGAACC+GGG | 0.548833 | 7_1:-75025830 | Msa1038200:three_prime_UTR |
| CGATTTACCAAGCAATAGCC+GGG | 0.554396 | 7_1:+75029560 | None:intergenic |
| TTCATGTACCTTCTTCCTGG+TGG | 0.554554 | 7_1:+75025845 | None:intergenic |
| TCACAATTCTCGGCCACTCG+AGG | 0.559052 | 7_1:-75028244 | Msa1038200:CDS |
| TAGGCCAATTATCCTGAGAC+TGG | 0.559585 | 7_1:+75027450 | None:intergenic |
| GAATCTGGTTTGTCTCTGGA+TGG | 0.560438 | 7_1:-75028094 | Msa1038200:CDS |
| CCCGTCATCCAAGAAACCTC+CGG | 0.562775 | 7_1:-75027312 | Msa1038200:CDS |
| AGTACAGAAGCTGAAGTCCC+GGG | 0.563633 | 7_1:+75029075 | None:intergenic |
| GGTATAAGTATACCAATTCA+CGG | 0.564865 | 7_1:-75029189 | Msa1038200:CDS |
| AGTGCCTGTTGAAGTATCAA+AGG | 0.565324 | 7_1:-75028854 | Msa1038200:CDS |
| GCAGAAGCAACAGTGGAAAG+TGG | 0.566398 | 7_1:-75028988 | Msa1038200:CDS |
| GTAAGTTGATAGTATGCTCA+AGG | 0.567019 | 7_1:+75027150 | None:intergenic |
| ACTACAACAAGAACAGTGTC+CGG | 0.568490 | 7_1:+75029470 | None:intergenic |
| TGAAAGGTTACAAGCTCTTG+AGG | 0.569707 | 7_1:-75027186 | Msa1038200:CDS |
| GCAACCAGTCATGGTTTACC+CGG | 0.572413 | 7_1:+75025812 | None:intergenic |
| TGATATTGAAGGTGAAAGCC+CGG | 0.574698 | 7_1:-75028059 | Msa1038200:CDS |
| AGCCCTAGACCGAATTGACT+TGG | 0.576455 | 7_1:+75029404 | None:intergenic |
| CACAATTCTCGGCCACTCGA+GGG | 0.576714 | 7_1:-75028243 | Msa1038200:CDS |
| GAAATAGGCTCGCTTGGGGA+CGG | 0.578388 | 7_1:+75028913 | None:intergenic |
| TGAGTTCTGTGTAGCCTACA+CGG | 0.579088 | 7_1:+75029265 | None:intergenic |
| ACTGTATGTTGACCAAGTAA+TGG | 0.581030 | 7_1:+75029495 | None:intergenic |
| GACACGTATCAGTAGAAACC+GGG | 0.582482 | 7_1:+75028410 | None:intergenic |
| GTATAAGTATACCAATTCAC+GGG | 0.584196 | 7_1:-75029188 | Msa1038200:CDS |
| CCTTCTCCTTCTCAGCAAGT+AGG | 0.587122 | 7_1:+75027807 | None:intergenic |
| TCTCCGGCTTTGATTCGTCA+GGG | 0.587366 | 7_1:+75027738 | None:intergenic |
| ATAGATCAACCTGTTGCTTG+AGG | 0.588877 | 7_1:-75027044 | Msa1038200:exon |
| TGAACCGGGTAAACCATGAC+TGG | 0.590111 | 7_1:-75025816 | Msa1038200:three_prime_UTR |
| TTACTGAGCGATGGAGGTGA+AGG | 0.590371 | 7_1:-75027131 | Msa1038200:CDS |
| ACTATCAACTTACTGAGCGA+TGG | 0.590607 | 7_1:-75027140 | Msa1038200:CDS |
| ACAATAGCTTGATATCATCC+AGG | 0.590922 | 7_1:-75025777 | Msa1038200:three_prime_UTR |
| AGATGGTCATGATCAAACTC+TGG | 0.591572 | 7_1:-75029433 | Msa1038200:CDS |
| ATTCCCTGACGAATCAAAGC+CGG | 0.593550 | 7_1:-75027741 | Msa1038200:CDS |
| AAAGGAATACCCAGAAAACT+CGG | 0.594276 | 7_1:-75027411 | Msa1038200:CDS |
| TATACCAATGATTAGCCACC+AGG | 0.595001 | 7_1:-75025860 | Msa1038200:three_prime_UTR |
| TTTCATCTTCTTCTTCTAGG+TGG | 0.601524 | 7_1:-75029926 | Msa1038200:CDS |
| GGCATTGGATTTATCGACGA+CGG | 0.602158 | 7_1:+75029590 | None:intergenic |
| CAAATGCAGCAAAATGTCCA+AGG | 0.604633 | 7_1:+75025686 | None:intergenic |
| CCTACTTGCTGAGAAGGAGA+AGG | 0.611893 | 7_1:-75027807 | Msa1038200:CDS |
| AACGTTTGAAGAAATTGGAG+AGG | 0.616380 | 7_1:-75027499 | Msa1038200:CDS |
| GCGGATCCTTTGTCCCGTGT+AGG | 0.618911 | 7_1:-75029279 | Msa1038200:CDS |
| ATCAACTTACTGAGCGATGG+AGG | 0.624710 | 7_1:-75027137 | Msa1038200:CDS |
| CATGACTCCTCTGTTCTATG+TGG | 0.625515 | 7_1:-75027254 | Msa1038200:CDS |
| TAAAACCGCAGAAGCAACAG+TGG | 0.628074 | 7_1:-75028995 | Msa1038200:CDS |
| GAGTTCTGTGTAGCCTACAC+GGG | 0.628936 | 7_1:+75029266 | None:intergenic |
| ATCGCCTGCAACAATTACGC+AGG | 0.632228 | 7_1:-75027082 | Msa1038200:CDS |
| CAAAGCTCCATATATTCACA+TGG | 0.633331 | 7_1:+75029135 | None:intergenic |
| CATCATCCTTAAGTGCTGCA+AGG | 0.634038 | 7_1:+75027877 | None:intergenic |
| AACAGGTTTAGAACCAACCC+CGG | 0.634266 | 7_1:-75028428 | Msa1038200:CDS |
| CTGTATCATTCAGAAATGCA+CGG | 0.635300 | 7_1:-75029317 | Msa1038200:CDS |
| TCTCAAACTCAAGGAAACAA+GGG | 0.635400 | 7_1:+75025485 | None:intergenic |
| AGCCTTGAACAAAACAAGCA+TGG | 0.635478 | 7_1:+75029768 | None:intergenic |
| GTGTAGCCTACACGGGACAA+AGG | 0.635719 | 7_1:+75029273 | None:intergenic |
| TGCTTTGTATAAAGAGCTGG+AGG | 0.640545 | 7_1:-75027990 | Msa1038200:CDS |
| TGAATAATAATTGCAATGAG+TGG | 0.646420 | 7_1:-75025611 | Msa1038200:three_prime_UTR |
| GAAGGAAATAGGCTCGCTTG+GGG | 0.648938 | 7_1:+75028909 | None:intergenic |
| AGCATTGTCAGTGATATTGA+AGG | 0.649510 | 7_1:-75028070 | Msa1038200:CDS |
| GCATTTCTGAATGATACAGA+CGG | 0.650826 | 7_1:+75029321 | None:intergenic |
| TTGCAGTGTTGATTCAACTG+AGG | 0.652343 | 7_1:-75029115 | Msa1038200:CDS |
| AGACATATCAGTCCCTCGAG+TGG | 0.652981 | 7_1:+75028231 | None:intergenic |
| GGATGACGGGTCATCAACCA+TGG | 0.660163 | 7_1:+75027325 | None:intergenic |
| TCACGGGAAAGATGATACCA+AGG | 0.663255 | 7_1:-75029172 | Msa1038200:CDS |
| GTTCCCATATCAGATGATGA+CGG | 0.684913 | 7_1:-75029210 | Msa1038200:CDS |
| ATTATCTCCACATAGAACAG+AGG | 0.694773 | 7_1:+75027247 | None:intergenic |
| ATCAAAGCCGGAGAACATGG+TGG | 0.695580 | 7_1:-75027729 | Msa1038200:CDS |
| ACGGCTGAGAAATGATCATG+CGG | 0.699329 | 7_1:-75029298 | Msa1038200:CDS |
| GGAAGAAGGTACATGAACAA+CGG | 0.718505 | 7_1:-75025839 | Msa1038200:three_prime_UTR |
| GTATCAGTAGAAACCGGGGT+TGG | 0.722796 | 7_1:+75028415 | None:intergenic |
| ACTCGTGGTTCTGACAACAA+TGG | 0.724092 | 7_1:+75029048 | None:intergenic |
| ACACGTATCAGTAGAAACCG+GGG | 0.749513 | 7_1:+75028411 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTTATAATAGATTATTT+GGG | + | chr7_1:75027165-75027184 | None:intergenic | 10.0% |
| !! | TACATTTATAATAGATTATT+TGG | + | chr7_1:75027166-75027185 | None:intergenic | 10.0% |
| !! | AAATAATCTATTATAAATGT+AGG | - | chr7_1:75027165-75027184 | Msa1038200:CDS | 10.0% |
| !!! | TACATTGATAATTTATATTT+TGG | - | chr7_1:75029130-75029149 | Msa1038200:CDS | 10.0% |
| !! | ATTCTATATCATTTAAGAAA+TGG | + | chr7_1:75027295-75027314 | None:intergenic | 15.0% |
| !!! | ATTTATATTTTGGTTTTTTG+AGG | - | chr7_1:75029140-75029159 | Msa1038200:CDS | 15.0% |
| !!! | GATTTTAACTTCATATATAA+TGG | + | chr7_1:75029765-75029784 | None:intergenic | 15.0% |
| !! | ATAAGATTATTTAATAGACA+CGG | - | chr7_1:75029917-75029936 | Msa1038200:CDS | 15.0% |
| !!! | CAATTATTATTCATTTTACA+AGG | + | chr7_1:75030250-75030269 | None:intergenic | 15.0% |
| !!! | ACTTCTTTTTAATTCTTTTG+CGG | + | chr7_1:75025534-75025553 | None:intergenic | 20.0% |
| !!! | AAAAGAAGTTTAAACCTTTT+TGG | - | chr7_1:75025545-75025564 | Msa1038200:three_prime_UTR | 20.0% |
| !!! | AAAGAAGTTTAAACCTTTTT+GGG | - | chr7_1:75025546-75025565 | Msa1038200:three_prime_UTR | 20.0% |
| !! | TGAGGATTAATTATTATTAC+AGG | + | chr7_1:75025733-75025752 | None:intergenic | 20.0% |
| !! | AATAAGAAAAAGAAGTTATG+AGG | + | chr7_1:75025751-75025770 | None:intergenic | 20.0% |
| !!! | TTAGTTTAGTTTGTATAAAC+AGG | + | chr7_1:75025793-75025812 | None:intergenic | 20.0% |
| !!! | TCTGTTATATTTGATAATGT+AGG | + | chr7_1:75026994-75027013 | None:intergenic | 20.0% |
| !!! | GATTTTTCAACTGTATAAAA+AGG | + | chr7_1:75027207-75027226 | None:intergenic | 20.0% |
| !!! | AGATATTAGGATTTGATTTT+CGG | + | chr7_1:75028247-75028266 | None:intergenic | 20.0% |
| !!! | TTTACAACATTTTCAGAATT+AGG | + | chr7_1:75028440-75028459 | None:intergenic | 20.0% |
| !!! | TAATTCTGAAAATGTTGTAA+AGG | - | chr7_1:75028439-75028458 | Msa1038200:CDS | 20.0% |
| !! | AAATATTCCAATGAAAGATT+CGG | - | chr7_1:75028493-75028512 | Msa1038200:CDS | 20.0% |
| !!! | TTTTAAAAATGACTAAAGAG+TGG | + | chr7_1:75028902-75028921 | None:intergenic | 20.0% |
| !! | AATAAAACACTTTATTCTCA+AGG | - | chr7_1:75029008-75029027 | Msa1038200:CDS | 20.0% |
| !! | ATTATCAATGTATCATTACA+GGG | + | chr7_1:75029122-75029141 | None:intergenic | 20.0% |
| !! | AATTATCAATGTATCATTAC+AGG | + | chr7_1:75029123-75029142 | None:intergenic | 20.0% |
| !!! | TATAGTTATTCAAGTTTAGT+TGG | - | chr7_1:75029211-75029230 | Msa1038200:CDS | 20.0% |
| !!! | ATTAATTTTTCTTTGCTAGT+CGG | + | chr7_1:75029681-75029700 | None:intergenic | 20.0% |
| !! | AGAAAAATTAATGTATGAAC+TGG | - | chr7_1:75029689-75029708 | Msa1038200:CDS | 20.0% |
| !!! | TATATGGCTTTTATTTTATG+TGG | - | chr7_1:75030351-75030370 | Msa1038200:five_prime_UTR | 20.0% |
| ! | TTATACTTCTTCTTCATCTA+CGG | - | chr7_1:75025666-75025685 | Msa1038200:three_prime_UTR | 25.0% |
| ! | TGATTTGACTAGAAAGAATA+TGG | - | chr7_1:75025904-75025923 | Msa1038200:intron | 25.0% |
| ! | CAAAAGAATTACAACATCAT+TGG | - | chr7_1:75025976-75025995 | Msa1038200:intron | 25.0% |
| ! | ACAGAAAAGAGGTTATTATT+TGG | - | chr7_1:75026141-75026160 | Msa1038200:intron | 25.0% |
| ! | GATAAGCTTGTAAATATTCA+AGG | - | chr7_1:75026223-75026242 | Msa1038200:intron | 25.0% |
| ! | TCATTTAAGAAATGGAGAAA+AGG | + | chr7_1:75027287-75027306 | None:intergenic | 25.0% |
| ! | GAAATGAAGGTAAAAGATAT+TGG | - | chr7_1:75028173-75028192 | Msa1038200:CDS | 25.0% |
| ! | TTCATTGAAAATGATGAAAG+TGG | - | chr7_1:75028218-75028237 | Msa1038200:CDS | 25.0% |
| !!! | ATATTAGGATTTGATTTTCG+GGG | + | chr7_1:75028245-75028264 | None:intergenic | 25.0% |
| !!! | GATATTAGGATTTGATTTTC+GGG | + | chr7_1:75028246-75028265 | None:intergenic | 25.0% |
| !! | TGGTTTCAGATTTTATTGAA+AGG | - | chr7_1:75028666-75028685 | Msa1038200:intron | 25.0% |
| !!! | CTATTTTAGCATATTGAGTA+TGG | - | chr7_1:75028943-75028962 | Msa1038200:CDS | 25.0% |
| !! | AAATTTTCCCTTACTTATCT+TGG | + | chr7_1:75028984-75029003 | None:intergenic | 25.0% |
| !!! | TATATTTTGGTTTTTTGAGG+AGG | - | chr7_1:75029143-75029162 | Msa1038200:CDS | 25.0% |
| ! | AAATCGTGTAAGAACATATT+CGG | - | chr7_1:75029415-75029434 | Msa1038200:CDS | 25.0% |
| !! | TCAGTTAACGAAATTTTCTA+GGG | + | chr7_1:75029554-75029573 | None:intergenic | 25.0% |
| ! | GTAATTACGAATATGAAGTT+TGG | + | chr7_1:75029611-75029630 | None:intergenic | 25.0% |
| ! | AATTAATGTATGAACTGGTT+TGG | - | chr7_1:75029694-75029713 | Msa1038200:CDS | 25.0% |
| !! | CACAGTCGTTATTTAAATTT+TGG | + | chr7_1:75029741-75029760 | None:intergenic | 25.0% |
| ! | CAAAATTTAAATAACGACTG+TGG | - | chr7_1:75029739-75029758 | Msa1038200:CDS | 25.0% |
| ! | TGAATAATAATTGCAATGAG+TGG | - | chr7_1:75030257-75030276 | Msa1038200:five_prime_UTR | 25.0% |
| ! | GAACTAACATTGTTTGTATA+TGG | - | chr7_1:75030335-75030354 | Msa1038200:five_prime_UTR | 25.0% |
| !!! | AAGTTTAAACCTTTTTGGGT+TGG | - | chr7_1:75025550-75025569 | Msa1038200:three_prime_UTR | 30.0% |
| AAGTTTCATCTTCTTCTTCT+AGG | - | chr7_1:75025939-75025958 | Msa1038200:intron | 30.0% | |
| TTTGATCATGATCCATTACT+TGG | - | chr7_1:75026361-75026380 | Msa1038200:intron | 30.0% | |
| GGTATAAGTATACCAATTCA+CGG | - | chr7_1:75026679-75026698 | Msa1038200:intron | 30.0% | |
| GTATAAGTATACCAATTCAC+GGG | - | chr7_1:75026680-75026699 | Msa1038200:intron | 30.0% | |
| AAGAGTTCCATGTGAATATA+TGG | - | chr7_1:75026726-75026745 | Msa1038200:intron | 30.0% | |
| ! | TTTTCCTTTGATACTTCAAC+AGG | + | chr7_1:75027021-75027040 | None:intergenic | 30.0% |
| TTTCTTTACCATGTAATGCA+TGG | - | chr7_1:75027066-75027085 | Msa1038200:CDS | 30.0% | |
| ! | CTGACTTAATGTTTTCTTCA+CGG | + | chr7_1:75027398-75027417 | None:intergenic | 30.0% |
| AAAACATTAAGTCAGGCAAT+AGG | - | chr7_1:75027403-75027422 | Msa1038200:CDS | 30.0% | |
| !! | AATCCTAATTTGCTAGATCT+TGG | - | chr7_1:75027486-75027505 | Msa1038200:CDS | 30.0% |
| TAGATCTTCATTAACTCTTG+AGG | + | chr7_1:75027592-75027611 | None:intergenic | 30.0% | |
| !! | AAGCAAAGGTTGAGTTTTAT+AGG | - | chr7_1:75028099-75028118 | Msa1038200:CDS | 30.0% |
| GAAGGTAAAAGATATTGGAT+TGG | - | chr7_1:75028178-75028197 | Msa1038200:CDS | 30.0% | |
| !! | TATTAGGATTTGATTTTCGG+GGG | + | chr7_1:75028244-75028263 | None:intergenic | 30.0% |
| ! | TCAGCTTTGTCATAGATATT+AGG | + | chr7_1:75028260-75028279 | None:intergenic | 30.0% |
| ATCTGCACAAAGTTTACAAA+TGG | - | chr7_1:75028316-75028335 | Msa1038200:CDS | 30.0% | |
| TTCTGAACGTTTGAAGAAAT+TGG | - | chr7_1:75028364-75028383 | Msa1038200:CDS | 30.0% | |
| CAAATTAAATTCAGATGCCA+TGG | - | chr7_1:75028526-75028545 | Msa1038200:CDS | 30.0% | |
| ! | GATAATGATTTAGCTTCTAC+TGG | - | chr7_1:75028638-75028657 | Msa1038200:intron | 30.0% |
| ! | ATTCAAGTTTAGTTGGTTGT+CGG | - | chr7_1:75029218-75029237 | Msa1038200:CDS | 30.0% |
| ATTGAGTGAAGTCTTCTTTA+AGG | - | chr7_1:75029341-75029360 | Msa1038200:CDS | 30.0% | |
| CATCAATGAATACTAAACTC+TGG | + | chr7_1:75029388-75029407 | None:intergenic | 30.0% | |
| CAGAGTTTAGTATTCATTGA+TGG | - | chr7_1:75029386-75029405 | Msa1038200:CDS | 30.0% | |
| !!! | AAACAGCAGGATTTTAATTC+AGG | - | chr7_1:75029467-75029486 | Msa1038200:CDS | 30.0% |
| ! | ACTAAACACCTATGATTTTG+TGG | + | chr7_1:75029522-75029541 | None:intergenic | 30.0% |
| ! | CAGTTAACGAAATTTTCTAG+GGG | + | chr7_1:75029553-75029572 | None:intergenic | 30.0% |
| ! | CTCAGTTAACGAAATTTTCT+AGG | + | chr7_1:75029555-75029574 | None:intergenic | 30.0% |
| TATATTGTTGCTCTCAACAA+TGG | - | chr7_1:75029826-75029845 | Msa1038200:CDS | 30.0% | |
| TTATTATGACGCAAAGTCTT+TGG | + | chr7_1:75029901-75029920 | None:intergenic | 30.0% | |
| CAAAGTAAACCAACCCAAAA+AGG | + | chr7_1:75025562-75025581 | None:intergenic | 35.0% | |
| AGAAGAAGATGAAACTTCAC+TGG | + | chr7_1:75025936-75025955 | None:intergenic | 35.0% | |
| TTTCATCTTCTTCTTCTAGG+TGG | - | chr7_1:75025942-75025961 | Msa1038200:intron | 35.0% | |
| ! | TCAAGGCTTGATCATGTTTT+AGG | - | chr7_1:75026115-75026134 | Msa1038200:intron | 35.0% |
| !! | GTTTTAGGCAAACAGAAAAG+AGG | - | chr7_1:75026130-75026149 | Msa1038200:intron | 35.0% |
| ACTGTATGTTGACCAAGTAA+TGG | + | chr7_1:75026376-75026395 | None:intergenic | 35.0% | |
| ! | CTTGTTGTAGTGAGAAATTC+CGG | - | chr7_1:75026410-75026429 | Msa1038200:intron | 35.0% |
| TTTGATCATGACCATCTAAC+CGG | + | chr7_1:75026432-75026451 | None:intergenic | 35.0% | |
| TGGTATTTGCCAAGTCAATT+CGG | - | chr7_1:75026455-75026474 | Msa1038200:intron | 35.0% | |
| !! | GCTGTTGATTTCAATGATTC+AGG | - | chr7_1:75026484-75026503 | Msa1038200:intron | 35.0% |
| ! | TTCAATGATTCAGGTGTTGT+TGG | - | chr7_1:75026493-75026512 | Msa1038200:intron | 35.0% |
| GCATTTCTGAATGATACAGA+CGG | + | chr7_1:75026550-75026569 | None:intergenic | 35.0% | |
| CTGTATCATTCAGAAATGCA+CGG | - | chr7_1:75026551-75026570 | Msa1038200:intron | 35.0% | |
| TGATACTGAGTCTGAATTTG+AGG | - | chr7_1:75026636-75026655 | Msa1038200:intron | 35.0% | |
| ATACCGTCATCATCTGATAT+GGG | + | chr7_1:75026664-75026683 | None:intergenic | 35.0% | |
| TATACCGTCATCATCTGATA+TGG | + | chr7_1:75026665-75026684 | None:intergenic | 35.0% | |
| TGGAACTCTTATATCTTCCT+TGG | + | chr7_1:75026716-75026735 | None:intergenic | 35.0% | |
| CAAAGCTCCATATATTCACA+TGG | + | chr7_1:75026736-75026755 | None:intergenic | 35.0% | |
| ! | TTGTTTTCTACTTGTACTCG+TGG | + | chr7_1:75026838-75026857 | None:intergenic | 35.0% |
| TAATGTAGGAACATCGTTGA+AGG | + | chr7_1:75026980-75026999 | None:intergenic | 35.0% | |
| CTTCAAATCCATGCATTACA+TGG | + | chr7_1:75027077-75027096 | None:intergenic | 35.0% | |
| CATGTAATGCATGGATTTGA+AGG | - | chr7_1:75027075-75027094 | Msa1038200:CDS | 35.0% | |
| !!! | TGATTTTAGAACTGACGAAG+AGG | - | chr7_1:75027341-75027360 | Msa1038200:CDS | 35.0% |
| CGTGAAGAAAACATTAAGTC+AGG | - | chr7_1:75027396-75027415 | Msa1038200:CDS | 35.0% | |
| ! | AGGCTAATAACATCTGAAAC+AGG | - | chr7_1:75027423-75027442 | Msa1038200:CDS | 35.0% |
| TCACCAAGATCTAGCAAATT+AGG | + | chr7_1:75027492-75027511 | None:intergenic | 35.0% | |
| AATAGAGGAAGACAATTGTC+TGG | - | chr7_1:75027534-75027553 | Msa1038200:CDS | 35.0% | |
| GATATTGCTGTCACAATTCT+CGG | - | chr7_1:75027614-75027633 | Msa1038200:CDS | 35.0% | |
| TCGCTATTCATAGACAATCT+GGG | + | chr7_1:75027678-75027697 | None:intergenic | 35.0% | |
| TTCGCTATTCATAGACAATC+TGG | + | chr7_1:75027679-75027698 | None:intergenic | 35.0% | |
| TCTGATGTTACTAACTCTAC+TGG | - | chr7_1:75027711-75027730 | Msa1038200:CDS | 35.0% | |
| AGCATTGTCAGTGATATTGA+AGG | - | chr7_1:75027798-75027817 | Msa1038200:CDS | 35.0% | |
| ! | TGTCTTTTAAGCTTGTCAAC+CGG | + | chr7_1:75027831-75027850 | None:intergenic | 35.0% |
| !! | AAAGACAAGTTGATCATGAC+AGG | - | chr7_1:75027844-75027863 | Msa1038200:CDS | 35.0% |
| GAATGCTTTGTATAAAGAGC+TGG | - | chr7_1:75027875-75027894 | Msa1038200:CDS | 35.0% | |
| AGAAAAGGCAACGTTACATA+TGG | - | chr7_1:75027965-75027984 | Msa1038200:CDS | 35.0% | |
| TGAGCAGTCAGAATATGAAT+TGG | - | chr7_1:75028016-75028035 | Msa1038200:CDS | 35.0% | |
| GTTAGAAGACTTAGAAGCAA+AGG | - | chr7_1:75028085-75028104 | Msa1038200:CDS | 35.0% | |
| !! | GGAGAAAAACTCTGAAATGA+AGG | - | chr7_1:75028160-75028179 | Msa1038200:CDS | 35.0% |
| TGACATTCAACTCATGTCTT+CGG | - | chr7_1:75028277-75028296 | Msa1038200:CDS | 35.0% | |
| AACGTTTGAAGAAATTGGAG+AGG | - | chr7_1:75028369-75028388 | Msa1038200:CDS | 35.0% | |
| AAAGGAATACCCAGAAAACT+CGG | - | chr7_1:75028457-75028476 | Msa1038200:CDS | 35.0% | |
| AATGGTGAACTTGAATACTC+TGG | - | chr7_1:75028590-75028609 | Msa1038200:intron | 35.0% | |
| ATTATCTCCACATAGAACAG+AGG | + | chr7_1:75028624-75028643 | None:intergenic | 35.0% | |
| ! | TTTAGCTTCTACTGGAAGTT+TGG | - | chr7_1:75028646-75028665 | Msa1038200:intron | 35.0% |
| TAGTATGCTCAAGGAAACTA+TGG | + | chr7_1:75028712-75028731 | None:intergenic | 35.0% | |
| !! | GTAAGTTGATAGTATGCTCA+AGG | + | chr7_1:75028721-75028740 | None:intergenic | 35.0% |
| TGAAGGACTTAAGTTATTGC+AGG | - | chr7_1:75028754-75028773 | Msa1038200:intron | 35.0% | |
| TATATACATCCTCAAGCAAC+AGG | + | chr7_1:75028836-75028855 | None:intergenic | 35.0% | |
| GTTGCTTGAGGATGTATATA+AGG | - | chr7_1:75028836-75028855 | Msa1038200:intron | 35.0% | |
| ! | GTGCTTTTATCTTACGTCAA+TGG | + | chr7_1:75028880-75028899 | None:intergenic | 35.0% |
| TCTGTGATCCAAGATAAGTA+AGG | - | chr7_1:75028973-75028992 | Msa1038200:CDS | 35.0% | |
| CTGTGATCCAAGATAAGTAA+GGG | - | chr7_1:75028974-75028993 | Msa1038200:CDS | 35.0% | |
| ATCAATGTATCATTACAGGG+AGG | + | chr7_1:75029119-75029138 | None:intergenic | 35.0% | |
| !!! | TTTTCTCTAGAACAGAACTG+CGG | + | chr7_1:75029259-75029278 | None:intergenic | 35.0% |
| !! | CAGTTCTGTTCTAGAGAAAA+AGG | - | chr7_1:75029259-75029278 | Msa1038200:CDS | 35.0% |
| AACTGAATCATACGTTCATC+TGG | + | chr7_1:75029288-75029307 | None:intergenic | 35.0% | |
| ATGAACGTATGATTCAGTTC+TGG | - | chr7_1:75029289-75029308 | Msa1038200:CDS | 35.0% | |
| TTCGGACTGAGATTAACTAT+AGG | - | chr7_1:75029433-75029452 | Msa1038200:CDS | 35.0% | |
| !! | GTATGAACTGGTTTGGAATT+TGG | - | chr7_1:75029701-75029720 | Msa1038200:CDS | 35.0% |
| TAAAACTCTAACTACTGCAC+AGG | + | chr7_1:75029797-75029816 | None:intergenic | 35.0% | |
| ! | TGTGCAGTAGTTAGAGTTTT+AGG | - | chr7_1:75029796-75029815 | Msa1038200:CDS | 35.0% |
| ACAATAGCTTGATATCATCC+AGG | - | chr7_1:75030091-75030110 | Msa1038200:intron | 35.0% | |
| TCATCCAGGTTACAAGAAAA+TGG | - | chr7_1:75030105-75030124 | Msa1038200:intron | 35.0% | |
| CATCCAGGTTACAAGAAAAT+GGG | - | chr7_1:75030106-75030125 | Msa1038200:intron | 35.0% | |
| ! | AATCCCATTTTCTTGTAACC+TGG | + | chr7_1:75030112-75030131 | None:intergenic | 35.0% |
| ! | TTTTTCGCCCTTCCTTTTTT+TGG | - | chr7_1:75030150-75030169 | Msa1038200:intron | 35.0% |
| ! | TTTTCGCCCTTCCTTTTTTT+GGG | - | chr7_1:75030151-75030170 | Msa1038200:intron | 35.0% |
| ACTATCCCCAAAAAAAGGAA+GGG | + | chr7_1:75030160-75030179 | None:intergenic | 35.0% | |
| AACTATCCCCAAAAAAAGGA+AGG | + | chr7_1:75030161-75030180 | None:intergenic | 35.0% | |
| AGGAAACTATCCCCAAAAAA+AGG | + | chr7_1:75030165-75030184 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGGGATAGTTTCCT+TGG | - | chr7_1:75030165-75030184 | Msa1038200:intron | 35.0% |
| TGGCTTCAGCTTTACTTGAA+TGG | - | chr7_1:75025996-75026015 | Msa1038200:intron | 40.0% | |
| !!! | CACCATGCTTGTTTTGTTCA+AGG | - | chr7_1:75026098-75026117 | Msa1038200:intron | 40.0% |
| AGCCTTGAACAAAACAAGCA+TGG | + | chr7_1:75026103-75026122 | None:intergenic | 40.0% | |
| GGTGAAGAAGAAGAAGAATC+TGG | - | chr7_1:75026331-75026350 | Msa1038200:intron | 40.0% | |
| ACTACAACAAGAACAGTGTC+CGG | + | chr7_1:75026401-75026420 | None:intergenic | 40.0% | |
| AGTGAGAAATTCCGGTTAGA+TGG | - | chr7_1:75026418-75026437 | Msa1038200:intron | 40.0% | |
| AGATGGTCATGATCAAACTC+TGG | - | chr7_1:75026435-75026454 | Msa1038200:intron | 40.0% | |
| GTTCCCATATCAGATGATGA+CGG | - | chr7_1:75026658-75026677 | Msa1038200:intron | 40.0% | |
| GTATCATCTTTCCCGTGAAT+TGG | + | chr7_1:75026694-75026713 | None:intergenic | 40.0% | |
| !! | TTGCAGTGTTGATTCAACTG+AGG | - | chr7_1:75026753-75026772 | Msa1038200:intron | 40.0% |
| ATGGTTTGACAGAACTTGAC+TGG | - | chr7_1:75026905-75026924 | Msa1038200:intron | 40.0% | |
| GGAACATCGTTGAAGGAAAT+AGG | + | chr7_1:75026973-75026992 | None:intergenic | 40.0% | |
| ! | AGTGCCTGTTGAAGTATCAA+AGG | - | chr7_1:75027014-75027033 | Msa1038200:intron | 40.0% |
| TGCATGGATTTGAAGGATAG+AGG | - | chr7_1:75027082-75027101 | Msa1038200:CDS | 40.0% | |
| ! | AATGTTTTCTTCACGGTCCA+TGG | + | chr7_1:75027391-75027410 | None:intergenic | 40.0% |
| TGACACGTATCAGTAGAAAC+CGG | + | chr7_1:75027462-75027481 | None:intergenic | 40.0% | |
| AAGCTAGCTGTCAGTAATAG+AGG | - | chr7_1:75027519-75027538 | Msa1038200:CDS | 40.0% | |
| ! | AAACGAATCTGGTTTGTCTC+TGG | - | chr7_1:75027770-75027789 | Msa1038200:CDS | 40.0% |
| TGATATTGAAGGTGAAAGCC+CGG | - | chr7_1:75027809-75027828 | Msa1038200:CDS | 40.0% | |
| ! | GTCTTTTAAGCTTGTCAACC+GGG | + | chr7_1:75027830-75027849 | None:intergenic | 40.0% |
| TGCTTTGTATAAAGAGCTGG+AGG | - | chr7_1:75027878-75027897 | Msa1038200:CDS | 40.0% | |
| ! | TAATGACCTACTTGCTGAGA+AGG | - | chr7_1:75028055-75028074 | Msa1038200:CDS | 40.0% |
| ! | TTTTTCTCCACCATGTTCTC+CGG | + | chr7_1:75028149-75028168 | None:intergenic | 40.0% |
| ! | CCAACTTTTCCGAGTTTTCT+GGG | + | chr7_1:75028469-75028488 | None:intergenic | 40.0% |
| ! | TCCAACTTTTCCGAGTTTTC+TGG | + | chr7_1:75028470-75028489 | None:intergenic | 40.0% |
| GACGAAACCGAATCTTTCAT+TGG | + | chr7_1:75028503-75028522 | None:intergenic | 40.0% | |
| ! | TCACCATTTTGCTTGCAAAC+CGG | + | chr7_1:75028578-75028597 | None:intergenic | 40.0% |
| TGAAAGGTTACAAGCTCTTG+AGG | - | chr7_1:75028682-75028701 | Msa1038200:intron | 40.0% | |
| ACTATCAACTTACTGAGCGA+TGG | - | chr7_1:75028728-75028747 | Msa1038200:intron | 40.0% | |
| ! | ATAGATCAACCTGTTGCTTG+AGG | - | chr7_1:75028824-75028843 | Msa1038200:intron | 40.0% |
| ATGTATCATTACAGGGAGGT+CGG | + | chr7_1:75029115-75029134 | None:intergenic | 40.0% | |
| TTAGTTGGTTGTCGGTATTG+CGG | - | chr7_1:75029226-75029245 | Msa1038200:CDS | 40.0% | |
| TGTGCATGCCACAAAATCAT+AGG | - | chr7_1:75029511-75029530 | Msa1038200:CDS | 40.0% | |
| CATGTGGAATAACTGTCATG+AGG | + | chr7_1:75029650-75029669 | None:intergenic | 40.0% | |
| CTAGTCGGTAAATAGTCATG+TGG | + | chr7_1:75029666-75029685 | None:intergenic | 40.0% | |
| ! | TATACCAATGATTAGCCACC+AGG | - | chr7_1:75030008-75030027 | Msa1038200:five_prime_UTR | 40.0% |
| TTGTTCATGTACCTTCTTCC+TGG | + | chr7_1:75030029-75030048 | None:intergenic | 40.0% | |
| ! | GGAAGAAGGTACATGAACAA+CGG | - | chr7_1:75030029-75030048 | Msa1038200:five_prime_UTR | 40.0% |
| !!! | TTTCGCCCTTCCTTTTTTTG+GGG | - | chr7_1:75030152-75030171 | Msa1038200:intron | 40.0% |
| CAAATGCAGCAAAATGTCCA+AGG | + | chr7_1:75030185-75030204 | None:intergenic | 40.0% | |
| ! | GGCATTGGATTTATCGACGA+CGG | + | chr7_1:75026281-75026300 | None:intergenic | 45.0% |
| CGATTTACCAAGCAATAGCC+GGG | + | chr7_1:75026311-75026330 | None:intergenic | 45.0% | |
| CCGATTTACCAAGCAATAGC+CGG | + | chr7_1:75026312-75026331 | None:intergenic | 45.0% | |
| CCGGCTATTGCTTGGTAAAT+CGG | - | chr7_1:75026309-75026328 | Msa1038200:intron | 45.0% | |
| CGGCTATTGCTTGGTAAATC+GGG | - | chr7_1:75026310-75026329 | Msa1038200:intron | 45.0% | |
| CTTGGTCAACATACAGTTGC+CGG | - | chr7_1:75026379-75026398 | Msa1038200:intron | 45.0% | |
| TTGCCAAGTCAATTCGGTCT+AGG | - | chr7_1:75026461-75026480 | Msa1038200:intron | 45.0% | |
| TGCCAAGTCAATTCGGTCTA+GGG | - | chr7_1:75026462-75026481 | Msa1038200:intron | 45.0% | |
| ACGGCTGAGAAATGATCATG+CGG | - | chr7_1:75026570-75026589 | Msa1038200:intron | 45.0% | |
| TGAGTTCTGTGTAGCCTACA+CGG | + | chr7_1:75026606-75026625 | None:intergenic | 45.0% | |
| TCACGGGAAAGATGATACCA+AGG | - | chr7_1:75026696-75026715 | Msa1038200:intron | 45.0% | |
| AAGTACAGAAGCTGAAGTCC+CGG | + | chr7_1:75026797-75026816 | None:intergenic | 45.0% | |
| !! | ACTCGTGGTTCTGACAACAA+TGG | + | chr7_1:75026823-75026842 | None:intergenic | 45.0% |
| TAAAACCGCAGAAGCAACAG+TGG | - | chr7_1:75026873-75026892 | Msa1038200:intron | 45.0% | |
| ! | ACTTTCCACTGTTGCTTCTG+CGG | + | chr7_1:75026881-75026900 | None:intergenic | 45.0% |
| GCAACAGTGGAAAGTGGAAA+TGG | - | chr7_1:75026886-75026905 | Msa1038200:intron | 45.0% | |
| TGAAGGAAATAGGCTCGCTT+GGG | + | chr7_1:75026963-75026982 | None:intergenic | 45.0% | |
| TTGAAGGAAATAGGCTCGCT+TGG | + | chr7_1:75026964-75026983 | None:intergenic | 45.0% | |
| ! | AACAGGTTTAGAACCAACCC+CGG | - | chr7_1:75027440-75027459 | Msa1038200:CDS | 45.0% |
| ACACGTATCAGTAGAAACCG+GGG | + | chr7_1:75027460-75027479 | None:intergenic | 45.0% | |
| GACACGTATCAGTAGAAACC+GGG | + | chr7_1:75027461-75027480 | None:intergenic | 45.0% | |
| ! | ATGCTTGCAGAACATTGGCT+TGG | - | chr7_1:75027558-75027577 | Msa1038200:CDS | 45.0% |
| !! | TGCTTGCAGAACATTGGCTT+GGG | - | chr7_1:75027559-75027578 | Msa1038200:CDS | 45.0% |
| TCGCTTGAGAGAAACGAATC+TGG | - | chr7_1:75027759-75027778 | Msa1038200:CDS | 45.0% | |
| ! | GAATCTGGTTTGTCTCTGGA+TGG | - | chr7_1:75027774-75027793 | Msa1038200:CDS | 45.0% |
| TTCCTGCAGTCTAGTGATCA+TGG | + | chr7_1:75027946-75027965 | None:intergenic | 45.0% | |
| CACTAGACTGCAGGAAGAAA+AGG | - | chr7_1:75027950-75027969 | Msa1038200:CDS | 45.0% | |
| ! | CATCATCCTTAAGTGCTGCA+AGG | + | chr7_1:75027994-75028013 | None:intergenic | 45.0% |
| CTTGCAGCACTTAAGGATGA+TGG | - | chr7_1:75027992-75028011 | Msa1038200:CDS | 45.0% | |
| ATTCCCTGACGAATCAAAGC+CGG | - | chr7_1:75028127-75028146 | Msa1038200:CDS | 45.0% | |
| CTCACCAGTCTCAGGATAAT+TGG | - | chr7_1:75028414-75028433 | Msa1038200:CDS | 45.0% | |
| TAGGCCAATTATCCTGAGAC+TGG | + | chr7_1:75028421-75028440 | None:intergenic | 45.0% | |
| CCCAGAAAACTCGGAAAAGT+TGG | - | chr7_1:75028466-75028485 | Msa1038200:CDS | 45.0% | |
| CATGACTCCTCTGTTCTATG+TGG | - | chr7_1:75028614-75028633 | Msa1038200:intron | 45.0% | |
| ATCAACTTACTGAGCGATGG+AGG | - | chr7_1:75028731-75028750 | Msa1038200:intron | 45.0% | |
| CTGCAACAATTACGCAGGAT+CGG | - | chr7_1:75028791-75028810 | Msa1038200:intron | 45.0% | |
| TGCAACAATTACGCAGGATC+GGG | - | chr7_1:75028792-75028811 | Msa1038200:intron | 45.0% | |
| GTCCATGTCGAGATAACATG+CGG | - | chr7_1:75029172-75029191 | Msa1038200:CDS | 45.0% | |
| AACCGCATGTTATCTCGACA+TGG | + | chr7_1:75029177-75029196 | None:intergenic | 45.0% | |
| ATGTCGAGATAACATGCGGT+TGG | - | chr7_1:75029176-75029195 | Msa1038200:CDS | 45.0% | |
| AACTCTAACTACTGCACAGG+TGG | + | chr7_1:75029794-75029813 | None:intergenic | 45.0% | |
| TCTTCCTGGTGGCTAATCAT+TGG | + | chr7_1:75030015-75030034 | None:intergenic | 45.0% | |
| ! | ATGATTAGCCACCAGGAAGA+AGG | - | chr7_1:75030015-75030034 | Msa1038200:five_prime_UTR | 45.0% |
| TTCATGTACCTTCTTCCTGG+TGG | + | chr7_1:75030026-75030045 | None:intergenic | 45.0% | |
| GTACATGAACAACGGTGAAC+CGG | - | chr7_1:75030037-75030056 | Msa1038200:intron | 45.0% | |
| TACATGAACAACGGTGAACC+GGG | - | chr7_1:75030038-75030057 | Msa1038200:intron | 45.0% | |
| TGTACAGTTGCAACCAGTCA+TGG | + | chr7_1:75030068-75030087 | None:intergenic | 45.0% | |
| AATCCAATGCCGAGACTTCC+CGG | - | chr7_1:75026290-75026309 | Msa1038200:intron | 50.0% | |
| AAGCAATAGCCGGGAAGTCT+CGG | + | chr7_1:75026302-75026321 | None:intergenic | 50.0% | |
| AGCCCTAGACCGAATTGACT+TGG | + | chr7_1:75026467-75026486 | None:intergenic | 50.0% | |
| GAGTTCTGTGTAGCCTACAC+GGG | + | chr7_1:75026605-75026624 | None:intergenic | 50.0% | |
| AGTACAGAAGCTGAAGTCCC+GGG | + | chr7_1:75026796-75026815 | None:intergenic | 50.0% | |
| GCAGAAGCAACAGTGGAAAG+TGG | - | chr7_1:75026880-75026899 | Msa1038200:intron | 50.0% | |
| GAAGGAAATAGGCTCGCTTG+GGG | + | chr7_1:75026962-75026981 | None:intergenic | 50.0% | |
| ! | TTTTCTTCACGGTCCATGGC+GGG | + | chr7_1:75027387-75027406 | None:intergenic | 50.0% |
| ! | GTTTTCTTCACGGTCCATGG+CGG | + | chr7_1:75027388-75027407 | None:intergenic | 50.0% |
| GTATCAGTAGAAACCGGGGT+TGG | + | chr7_1:75027456-75027475 | None:intergenic | 50.0% | |
| CTGGCATGCTTGCAGAACAT+TGG | - | chr7_1:75027553-75027572 | Msa1038200:CDS | 50.0% | |
| AGACATATCAGTCCCTCGAG+TGG | + | chr7_1:75027640-75027659 | None:intergenic | 50.0% | |
| AGCCATGATCACTAGACTGC+AGG | - | chr7_1:75027941-75027960 | Msa1038200:CDS | 50.0% | |
| TGGAAGCCTTGCAGCACTTA+AGG | - | chr7_1:75027985-75028004 | Msa1038200:CDS | 50.0% | |
| CCTTCTCCTTCTCAGCAAGT+AGG | + | chr7_1:75028064-75028083 | None:intergenic | 50.0% | |
| ! | CCTACTTGCTGAGAAGGAGA+AGG | - | chr7_1:75028061-75028080 | Msa1038200:CDS | 50.0% |
| ! | TCTCCGGCTTTGATTCGTCA+GGG | + | chr7_1:75028133-75028152 | None:intergenic | 50.0% |
| ! | TTCTCCGGCTTTGATTCGTC+AGG | + | chr7_1:75028134-75028153 | None:intergenic | 50.0% |
| CGAATCAAAGCCGGAGAACA+TGG | - | chr7_1:75028136-75028155 | Msa1038200:CDS | 50.0% | |
| ATCAAAGCCGGAGAACATGG+TGG | - | chr7_1:75028139-75028158 | Msa1038200:CDS | 50.0% | |
| CCTGAGACTGGTGAGAATTC+AGG | + | chr7_1:75028409-75028428 | None:intergenic | 50.0% | |
| CCTGAATTCTCACCAGTCTC+AGG | - | chr7_1:75028406-75028425 | Msa1038200:CDS | 50.0% | |
| ACCGGAGGTTTCTTGGATGA+CGG | + | chr7_1:75028560-75028579 | None:intergenic | 50.0% | |
| CTTGCAAACCGGAGGTTTCT+TGG | + | chr7_1:75028567-75028586 | None:intergenic | 50.0% | |
| ! | CCATTTTGCTTGCAAACCGG+AGG | + | chr7_1:75028575-75028594 | None:intergenic | 50.0% |
| ! | CCTCCGGTTTGCAAGCAAAA+TGG | - | chr7_1:75028572-75028591 | Msa1038200:intron | 50.0% |
| TTACTGAGCGATGGAGGTGA+AGG | - | chr7_1:75028737-75028756 | Msa1038200:intron | 50.0% | |
| ATCGCCTGCAACAATTACGC+AGG | - | chr7_1:75028786-75028805 | Msa1038200:intron | 50.0% | |
| CGATCCTGCGTAATTGTTGC+AGG | + | chr7_1:75028793-75028812 | None:intergenic | 50.0% | |
| TGAACCGGGTAAACCATGAC+TGG | - | chr7_1:75030052-75030071 | Msa1038200:intron | 50.0% | |
| GCAACCAGTCATGGTTTACC+CGG | + | chr7_1:75030059-75030078 | None:intergenic | 50.0% | |
| GAGACTTCCCGGCTATTGCT+TGG | - | chr7_1:75026301-75026320 | Msa1038200:intron | 55.0% | |
| GTGTAGCCTACACGGGACAA+AGG | + | chr7_1:75026598-75026617 | None:intergenic | 55.0% | |
| GATCTGACTTCCACGAAGCC+CGG | - | chr7_1:75026775-75026794 | Msa1038200:intron | 55.0% | |
| ATCTGACTTCCACGAAGCCC+GGG | - | chr7_1:75026776-75026795 | Msa1038200:intron | 55.0% | |
| GAAATAGGCTCGCTTGGGGA+CGG | + | chr7_1:75026958-75026977 | None:intergenic | 55.0% | |
| TCACAATTCTCGGCCACTCG+AGG | - | chr7_1:75027624-75027643 | Msa1038200:CDS | 55.0% | |
| CACAATTCTCGGCCACTCGA+GGG | - | chr7_1:75027625-75027644 | Msa1038200:CDS | 55.0% | |
| !! | GGATGACGGGTCATCAACCA+TGG | + | chr7_1:75028546-75028565 | None:intergenic | 55.0% |
| CCGGAGGTTTCTTGGATGAC+GGG | + | chr7_1:75028559-75028578 | None:intergenic | 55.0% | |
| CCCGTCATCCAAGAAACCTC+CGG | - | chr7_1:75028556-75028575 | Msa1038200:intron | 55.0% | |
| GGTAGCAAGCGTGAAACAGC+AGG | - | chr7_1:75029454-75029473 | Msa1038200:CDS | 55.0% | |
| TAGCCGGGAAGTCTCGGCAT+TGG | + | chr7_1:75026296-75026315 | None:intergenic | 60.0% | |
| GCGGATCCTTTGTCCCGTGT+AGG | - | chr7_1:75026589-75026608 | Msa1038200:intron | 60.0% | |
| ATCTGAGCGAAGACCCGCCA+TGG | - | chr7_1:75027371-75027390 | Msa1038200:CDS | 60.0% | |
| AGCTGAAGTCCCGGGCTTCG+TGG | + | chr7_1:75026788-75026807 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 75025498 | 75030392 | 75025498 | ID=Msa1038200;Name=Msa1038200 |
| chr7_1 | mRNA | 75025498 | 75030392 | 75025498 | ID=Msa1038200-mRNA-1;Parent=Msa1038200;Name=Msa1038200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=277|1|1|1|0.33|0|4|403|874 |
| chr7_1 | exon | 75025498 | 75025887 | 75025498 | ID=Msa1038200-mRNA-1:exon:19087;Parent=Msa1038200-mRNA-1 |
| chr7_1 | exon | 75027033 | 75028550 | 75027033 | ID=Msa1038200-mRNA-1:exon:19086;Parent=Msa1038200-mRNA-1 |
| chr7_1 | exon | 75028848 | 75030054 | 75028848 | ID=Msa1038200-mRNA-1:exon:19085;Parent=Msa1038200-mRNA-1 |
| chr7_1 | exon | 75030203 | 75030392 | 75030203 | ID=Msa1038200-mRNA-1:exon:19084;Parent=Msa1038200-mRNA-1 |
| chr7_1 | five_prime_UTR | 75030203 | 75030392 | 75030203 | ID=Msa1038200-mRNA-1:five_prime_utr;Parent=Msa1038200-mRNA-1 |
| chr7_1 | five_prime_UTR | 75029968 | 75030054 | 75029968 | ID=Msa1038200-mRNA-1:five_prime_utr;Parent=Msa1038200-mRNA-1 |
| chr7_1 | CDS | 75028848 | 75029967 | 75028848 | ID=Msa1038200-mRNA-1:cds;Parent=Msa1038200-mRNA-1 |
| chr7_1 | CDS | 75027046 | 75028550 | 75027046 | ID=Msa1038200-mRNA-1:cds;Parent=Msa1038200-mRNA-1 |
| chr7_1 | three_prime_UTR | 75027033 | 75027045 | 75027033 | ID=Msa1038200-mRNA-1:three_prime_utr;Parent=Msa1038200-mRNA-1 |
| chr7_1 | three_prime_UTR | 75025498 | 75025887 | 75025498 | ID=Msa1038200-mRNA-1:three_prime_utr;Parent=Msa1038200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
