Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416330 | sp|D3J163|VPYL_MEDTR | 94.397 | 464 | 26 | 0 | 1 | 464 | 1 | 464 | 0.0 | 913 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416330 | A0A2Z6MD82 | 82.516 | 469 | 76 | 3 | 1 | 464 | 1 | 468 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1416330 | -0.810444 | 1.149126e-50 | -8.615850e-47 |
| Msa0027020 | Msa1416330 | -0.805500 | 1.295244e-49 | -8.615850e-47 |
| Msa0034540 | Msa1416330 | 0.812202 | 4.772463e-51 | -8.615850e-47 |
| Msa0046800 | Msa1416330 | -0.803075 | 4.143752e-49 | -8.615850e-47 |
| Msa0047400 | Msa1416330 | -0.800411 | 1.459600e-48 | -8.615850e-47 |
| Msa0072440 | Msa1416330 | 0.840290 | 9.502892e-58 | -8.615850e-47 |
| Msa0107830 | Msa1416330 | 0.827546 | 1.474238e-54 | -8.615850e-47 |
| Msa0117650 | Msa1416330 | 0.816169 | 6.352181e-52 | -8.615850e-47 |
| Msa1350130 | Msa1416330 | -0.800096 | 1.691642e-48 | -8.615850e-47 |
| Msa1352530 | Msa1416330 | 0.836118 | 1.128462e-56 | -8.615850e-47 |
| Msa1357570 | Msa1416330 | 0.814679 | 1.362405e-51 | -8.615850e-47 |
| Msa1363170 | Msa1416330 | -0.806093 | 9.725568e-50 | -8.615850e-47 |
| Msa1372460 | Msa1416330 | -0.806255 | 8.987725e-50 | -8.615850e-47 |
| Msa1375570 | Msa1416330 | -0.819067 | 1.411073e-52 | -8.615850e-47 |
| Msa1388010 | Msa1416330 | -0.815505 | 8.932899e-52 | -8.615850e-47 |
| Msa1395250 | Msa1416330 | 0.800949 | 1.133442e-48 | -8.615850e-47 |
| Msa1395380 | Msa1416330 | -0.801509 | 8.709042e-49 | -8.615850e-47 |
| Msa1400830 | Msa1416330 | -0.800766 | 1.235436e-48 | -8.615850e-47 |
| Msa1403820 | Msa1416330 | -0.802971 | 4.355276e-49 | -8.615850e-47 |
| Msa1410360 | Msa1416330 | -0.814245 | 1.699207e-51 | -8.615850e-47 |
| Msa1411690 | Msa1416330 | -0.804427 | 2.171210e-49 | -8.615850e-47 |
| Msa1416330 | Msa1454300 | -0.801823 | 7.507708e-49 | -8.615850e-47 |
| Msa1416330 | Msa1455560 | -0.803434 | 3.493146e-49 | -8.615850e-47 |
| Msa1416330 | Msa1462700 | -0.808143 | 3.578930e-50 | -8.615850e-47 |
| Msa0603310 | Msa1416330 | 0.819185 | 1.326017e-52 | -8.615850e-47 |
| Msa0608720 | Msa1416330 | -0.809602 | 1.744601e-50 | -8.615850e-47 |
| Msa0621870 | Msa1416330 | -0.808752 | 2.653502e-50 | -8.615850e-47 |
| Msa0631130 | Msa1416330 | 0.803650 | 3.150399e-49 | -8.615850e-47 |
| Msa0637590 | Msa1416330 | 0.810035 | 1.408194e-50 | -8.615850e-47 |
| Msa0644340 | Msa1416330 | 0.814027 | 1.898805e-51 | -8.615850e-47 |
| Msa0657260 | Msa1416330 | 0.804442 | 2.155518e-49 | -8.615850e-47 |
| Msa0695250 | Msa1416330 | -0.801000 | 1.106895e-48 | -8.615850e-47 |
| Msa0695470 | Msa1416330 | -0.818725 | 1.686986e-52 | -8.615850e-47 |
| Msa0701490 | Msa1416330 | 0.822436 | 2.371690e-53 | -8.615850e-47 |
| Msa0701560 | Msa1416330 | 0.821846 | 3.248897e-53 | -8.615850e-47 |
| Msa0713570 | Msa1416330 | -0.804139 | 2.493247e-49 | -8.615850e-47 |
| Msa0744710 | Msa1416330 | 0.816105 | 6.565693e-52 | -8.615850e-47 |
| Msa0751510 | Msa1416330 | 0.828681 | 7.851861e-55 | -8.615850e-47 |
| Msa0755550 | Msa1416330 | -0.806540 | 7.827820e-50 | -8.615850e-47 |
| Msa0790030 | Msa1416330 | 0.969508 | 3.171866e-130 | -8.615850e-47 |
| Msa0795320 | Msa1416330 | 0.802481 | 5.496999e-49 | -8.615850e-47 |
| Msa0816390 | Msa1416330 | -0.818317 | 2.087510e-52 | -8.615850e-47 |
| Msa0826240 | Msa1416330 | 0.814822 | 1.266624e-51 | -8.615850e-47 |
| Msa0829990 | Msa1416330 | 0.828168 | 1.044343e-54 | -8.615850e-47 |
| Msa0833980 | Msa1416330 | -0.822707 | 2.051626e-53 | -8.615850e-47 |
| Msa0841030 | Msa1416330 | 0.806279 | 8.886716e-50 | -8.615850e-47 |
| Msa0120860 | Msa1416330 | 0.824421 | 8.147861e-54 | -8.615850e-47 |
| Msa0127620 | Msa1416330 | 0.808983 | 2.368748e-50 | -8.615850e-47 |
| Msa0129770 | Msa1416330 | 0.818618 | 1.783989e-52 | -8.615850e-47 |
| Msa0143640 | Msa1416330 | 0.812770 | 3.586774e-51 | -8.615850e-47 |
| Msa0145590 | Msa1416330 | -0.804525 | 2.071820e-49 | -8.615850e-47 |
| Msa0164350 | Msa1416330 | 0.834449 | 2.977674e-56 | -8.615850e-47 |
| Msa0164530 | Msa1416330 | -0.813226 | 2.849379e-51 | -8.615850e-47 |
| Msa0167160 | Msa1416330 | -0.808905 | 2.461667e-50 | -8.615850e-47 |
| Msa0175060 | Msa1416330 | 0.805274 | 1.444901e-49 | -8.615850e-47 |
| Msa0186240 | Msa1416330 | 0.819240 | 1.288351e-52 | -8.615850e-47 |
| Msa0198280 | Msa1416330 | -0.808302 | 3.310833e-50 | -8.615850e-47 |
| Msa1225280 | Msa1416330 | -0.825215 | 5.292888e-54 | -8.615850e-47 |
| Msa1228260 | Msa1416330 | -0.800565 | 1.358076e-48 | -8.615850e-47 |
| Msa1239190 | Msa1416330 | 0.814123 | 1.808093e-51 | -8.615850e-47 |
| Msa1254870 | Msa1416330 | 0.822216 | 2.666910e-53 | -8.615850e-47 |
| Msa1262540 | Msa1416330 | 0.807442 | 5.044402e-50 | -8.615850e-47 |
| Msa1265990 | Msa1416330 | -0.800252 | 1.572787e-48 | -8.615850e-47 |
| Msa1266750 | Msa1416330 | -0.805632 | 1.215227e-49 | -8.615850e-47 |
| Msa1269200 | Msa1416330 | 0.802833 | 4.649589e-49 | -8.615850e-47 |
| Msa1271220 | Msa1416330 | -0.801230 | 9.933498e-49 | -8.615850e-47 |
| Msa1299480 | Msa1416330 | 0.812496 | 4.117789e-51 | -8.615850e-47 |
| Msa1303690 | Msa1416330 | -0.804457 | 2.140893e-49 | -8.615850e-47 |
| Msa1317740 | Msa1416330 | 0.820656 | 6.112114e-53 | -8.615850e-47 |
| Msa1325260 | Msa1416330 | -0.800733 | 1.255070e-48 | -8.615850e-47 |
| Msa1328430 | Msa1416330 | 0.822253 | 2.614442e-53 | -8.615850e-47 |
| Msa0378320 | Msa1416330 | 0.813433 | 2.565715e-51 | -8.615850e-47 |
| Msa0380470 | Msa1416330 | -0.800434 | 1.444088e-48 | -8.615850e-47 |
| Msa0382050 | Msa1416330 | -0.805494 | 1.299189e-49 | -8.615850e-47 |
| Msa0384140 | Msa1416330 | -0.800152 | 1.648313e-48 | -8.615850e-47 |
| Msa0386310 | Msa1416330 | -0.802252 | 6.128035e-49 | -8.615850e-47 |
| Msa0390200 | Msa1416330 | 0.823143 | 1.623544e-53 | -8.615850e-47 |
| Msa0405200 | Msa1416330 | 0.826286 | 2.948786e-54 | -8.615850e-47 |
| Msa0405210 | Msa1416330 | 0.817858 | 2.651250e-52 | -8.615850e-47 |
| Msa0415060 | Msa1416330 | -0.802619 | 5.148710e-49 | -8.615850e-47 |
| Msa0415860 | Msa1416330 | -0.816089 | 6.618731e-52 | -8.615850e-47 |
| Msa0427660 | Msa1416330 | 0.809862 | 1.533899e-50 | -8.615850e-47 |
| Msa0428720 | Msa1416330 | -0.801883 | 7.298228e-49 | -8.615850e-47 |
| Msa0431550 | Msa1416330 | -0.822039 | 2.931625e-53 | -8.615850e-47 |
| Msa0434300 | Msa1416330 | 0.806500 | 7.982852e-50 | -8.615850e-47 |
| Msa0434400 | Msa1416330 | 0.806368 | 8.509149e-50 | -8.615850e-47 |
| Msa0434830 | Msa1416330 | -0.800880 | 1.170981e-48 | -8.615850e-47 |
| Msa0436660 | Msa1416330 | -0.807139 | 5.848602e-50 | -8.615850e-47 |
| Msa0442860 | Msa1416330 | 0.804630 | 1.969927e-49 | -8.615850e-47 |
| Msa0444770 | Msa1416330 | -0.814159 | 1.775973e-51 | -8.615850e-47 |
| Msa0449500 | Msa1416330 | 0.816642 | 4.977177e-52 | -8.615850e-47 |
| Msa0473000 | Msa1416330 | 0.803624 | 3.190007e-49 | -8.615850e-47 |
| Msa0474290 | Msa1416330 | -0.824812 | 6.588395e-54 | -8.615850e-47 |
| Msa0476560 | Msa1416330 | -0.823730 | 1.183576e-53 | -8.615850e-47 |
| Msa0478080 | Msa1416330 | 0.807550 | 4.784349e-50 | -8.615850e-47 |
| Msa1026890 | Msa1416330 | 0.805459 | 1.321098e-49 | -8.615850e-47 |
| Msa1026970 | Msa1416330 | 0.802222 | 6.214942e-49 | -8.615850e-47 |
| Msa1030210 | Msa1416330 | 0.824051 | 9.952742e-54 | -8.615850e-47 |
| Msa1037360 | Msa1416330 | 0.808923 | 2.440140e-50 | -8.615850e-47 |
| Msa1038170 | Msa1416330 | 0.832207 | 1.078594e-55 | -8.615850e-47 |
| Msa1038200 | Msa1416330 | 0.810943 | 8.966107e-51 | -8.615850e-47 |
| Msa1050970 | Msa1416330 | 0.803465 | 3.441113e-49 | -8.615850e-47 |
| Msa1062060 | Msa1416330 | 0.805729 | 1.159849e-49 | -8.615850e-47 |
| Msa1062070 | Msa1416330 | 0.814493 | 1.498192e-51 | -8.615850e-47 |
| Msa1064240 | Msa1416330 | 0.825535 | 4.446896e-54 | -8.615850e-47 |
| Msa1069250 | Msa1416330 | 0.807318 | 5.359641e-50 | -8.615850e-47 |
| Msa1076120 | Msa1416330 | -0.827324 | 1.665777e-54 | -8.615850e-47 |
| Msa0246140 | Msa1416330 | 0.812351 | 4.428098e-51 | -8.615850e-47 |
| Msa0267700 | Msa1416330 | 0.822983 | 1.768987e-53 | -8.615850e-47 |
| Msa0269710 | Msa1416330 | 0.827019 | 1.971509e-54 | -8.615850e-47 |
| Msa0271700 | Msa1416330 | 0.803542 | 3.317610e-49 | -8.615850e-47 |
| Msa0310270 | Msa1416330 | -0.801560 | 8.501867e-49 | -8.615850e-47 |
| Msa0319680 | Msa1416330 | 0.806320 | 8.709858e-50 | -8.615850e-47 |
| Msa0343520 | Msa1416330 | 0.830110 | 3.531259e-55 | -8.615850e-47 |
| Msa0345050 | Msa1416330 | 0.801323 | 9.503782e-49 | -8.615850e-47 |
| Msa0345890 | Msa1416330 | 0.800026 | 1.748465e-48 | -8.615850e-47 |
| Msa0346170 | Msa1416330 | 0.803418 | 3.518602e-49 | -8.615850e-47 |
| Msa1107220 | Msa1416330 | 0.819763 | 9.791980e-53 | -8.615850e-47 |
| Msa1110350 | Msa1416330 | -0.803959 | 2.717825e-49 | -8.615850e-47 |
| Msa1111900 | Msa1416330 | 0.816611 | 5.058704e-52 | -8.615850e-47 |
| Msa1112190 | Msa1416330 | 0.800136 | 1.660020e-48 | -8.615850e-47 |
| Msa1123000 | Msa1416330 | 0.811563 | 6.577538e-51 | -8.615850e-47 |
| Msa1126320 | Msa1416330 | -0.822414 | 2.399816e-53 | -8.615850e-47 |
| Msa1129540 | Msa1416330 | 0.829913 | 3.945343e-55 | -8.615850e-47 |
| Msa1131300 | Msa1416330 | -0.806703 | 7.233412e-50 | -8.615850e-47 |
| Msa1133690 | Msa1416330 | 0.811079 | 8.376862e-51 | -8.615850e-47 |
| Msa1137750 | Msa1416330 | 0.815989 | 6.967443e-52 | -8.615850e-47 |
| Msa1146010 | Msa1416330 | 0.812351 | 4.429997e-51 | -8.615850e-47 |
| Msa1150750 | Msa1416330 | 0.824948 | 6.120416e-54 | -8.615850e-47 |
| Msa1154020 | Msa1416330 | -0.802789 | 4.747671e-49 | -8.615850e-47 |
| Msa1154240 | Msa1416330 | 0.823855 | 1.106200e-53 | -8.615850e-47 |
| Msa1154310 | Msa1416330 | 0.818349 | 2.053517e-52 | -8.615850e-47 |
| Msa1163130 | Msa1416330 | -0.811761 | 5.955165e-51 | -8.615850e-47 |
| Msa1163230 | Msa1416330 | -0.832089 | 1.152986e-55 | -8.615850e-47 |
| Msa1164230 | Msa1416330 | 0.815435 | 9.257273e-52 | -8.615850e-47 |
| Msa1177650 | Msa1416330 | 0.803872 | 2.832956e-49 | -8.615850e-47 |
| Msa1202110 | Msa1416330 | 0.817871 | 2.633522e-52 | -8.615850e-47 |
| Msa1203320 | Msa1416330 | -0.802479 | 5.502028e-49 | -8.615850e-47 |
| Msa1211610 | Msa1416330 | 0.809894 | 1.509616e-50 | -8.615850e-47 |
| Msa1217260 | Msa1416330 | 0.802745 | 4.848941e-49 | -8.615850e-47 |
| Msa0492330 | Msa1416330 | -0.825855 | 3.732850e-54 | -8.615850e-47 |
| Msa0497680 | Msa1416330 | 0.843280 | 1.543713e-58 | -8.615850e-47 |
| Msa0500580 | Msa1416330 | -0.801536 | 8.595716e-49 | -8.615850e-47 |
| Msa0508160 | Msa1416330 | 0.800420 | 1.453575e-48 | -8.615850e-47 |
| Msa0518490 | Msa1416330 | 0.804515 | 2.081646e-49 | -8.615850e-47 |
| Msa0518720 | Msa1416330 | -0.829481 | 5.025862e-55 | -8.615850e-47 |
| Msa0522140 | Msa1416330 | 0.807014 | 6.215010e-50 | -8.615850e-47 |
| Msa0522170 | Msa1416330 | 0.817311 | 3.522641e-52 | -8.615850e-47 |
| Msa0522820 | Msa1416330 | -0.810950 | 8.932385e-51 | -8.615850e-47 |
| Msa0527420 | Msa1416330 | -0.820967 | 5.185551e-53 | -8.615850e-47 |
| Msa0548420 | Msa1416330 | 0.809809 | 1.574546e-50 | -8.615850e-47 |
| Msa0565120 | Msa1416330 | 0.826957 | 2.039365e-54 | -8.615850e-47 |
| Msa0574420 | Msa1416330 | 0.813803 | 2.126921e-51 | -8.615850e-47 |
| Msa0580840 | Msa1416330 | 0.809749 | 1.622338e-50 | -8.615850e-47 |
| Msa0597800 | Msa1416330 | 0.801326 | 9.490716e-49 | -8.615850e-47 |
| Msa0597820 | Msa1416330 | 0.812792 | 3.547347e-51 | -8.615850e-47 |
| Msa0866320 | Msa1416330 | -0.803755 | 2.995485e-49 | -8.615850e-47 |
| Msa0874750 | Msa1416330 | 0.819447 | 1.156057e-52 | -8.615850e-47 |
| Msa0933320 | Msa1416330 | -0.827035 | 1.953536e-54 | -8.615850e-47 |
| Msa0934800 | Msa1416330 | -0.801881 | 7.304824e-49 | -8.615850e-47 |
| Msa0941420 | Msa1416330 | -0.801653 | 8.135824e-49 | -8.615850e-47 |
| Msa0971100 | Msa1416330 | -0.824315 | 8.625306e-54 | -8.615850e-47 |
| Msa0973010 | Msa1416330 | -0.808945 | 2.413268e-50 | -8.615850e-47 |
| Msa0978540 | Msa1416330 | -0.807434 | 5.065241e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416330 | MtrunA17_Chr1g0196261 | 94.397 | 464 | 26 | 0 | 1 | 464 | 1 | 464 | 0.0 | 913 |
| Msa1416330 | MtrunA17_Chr6g0461061 | 30.263 | 456 | 288 | 9 | 1 | 429 | 1 | 453 | 3.03e-54 | 190 |
| Msa1416330 | MtrunA17_Chr5g0418551 | 31.694 | 183 | 101 | 2 | 250 | 429 | 51 | 212 | 1.00e-18 | 85.5 |
| Msa1416330 | MtrunA17_Chr5g0418551 | 30.729 | 192 | 110 | 3 | 220 | 410 | 57 | 226 | 9.60e-16 | 77.0 |
| Msa1416330 | MtrunA17_Chr8g0361891 | 25.714 | 350 | 212 | 10 | 1 | 306 | 3 | 348 | 6.69e-16 | 79.0 |
| Msa1416330 | MtrunA17_Chr2g0328031 | 31.250 | 224 | 137 | 8 | 211 | 429 | 7 | 218 | 1.19e-14 | 75.9 |
| Msa1416330 | MtrunA17_Chr1g0211241 | 27.933 | 179 | 109 | 2 | 257 | 435 | 173 | 331 | 1.54e-14 | 75.9 |
| Msa1416330 | MtrunA17_Chr2g0277651 | 27.692 | 195 | 121 | 3 | 228 | 402 | 501 | 695 | 5.63e-14 | 74.3 |
| Msa1416330 | MtrunA17_Chr4g0030551 | 28.016 | 257 | 151 | 11 | 183 | 429 | 66 | 298 | 9.90e-14 | 73.2 |
| Msa1416330 | MtrunA17_Chr2g0327711 | 25.704 | 284 | 173 | 10 | 161 | 429 | 34 | 294 | 1.04e-13 | 73.2 |
| Msa1416330 | MtrunA17_Chr4g0031491 | 28.384 | 229 | 149 | 5 | 206 | 429 | 1 | 219 | 1.42e-13 | 72.4 |
| Msa1416330 | MtrunA17_Chr4g0073161 | 27.826 | 230 | 141 | 6 | 221 | 429 | 20 | 245 | 2.48e-13 | 72.0 |
| Msa1416330 | MtrunA17_Chr4g0064931 | 28.235 | 170 | 102 | 2 | 260 | 429 | 77 | 226 | 4.14e-13 | 71.6 |
| Msa1416330 | MtrunA17_Chr7g0263471 | 28.512 | 242 | 135 | 7 | 213 | 444 | 119 | 332 | 4.31e-13 | 71.2 |
| Msa1416330 | MtrunA17_Chr6g0472461 | 27.803 | 223 | 131 | 8 | 233 | 429 | 26 | 244 | 7.38e-13 | 70.5 |
| Msa1416330 | MtrunA17_Chr4g0049351 | 29.808 | 208 | 108 | 5 | 268 | 458 | 72 | 258 | 1.73e-12 | 69.3 |
| Msa1416330 | MtrunA17_Chr4g0010051 | 26.457 | 223 | 149 | 5 | 220 | 437 | 21 | 233 | 3.36e-12 | 68.2 |
| Msa1416330 | MtrunA17_Chr4g0010051 | 30.332 | 211 | 128 | 7 | 221 | 425 | 57 | 254 | 1.30e-11 | 66.2 |
| Msa1416330 | MtrunA17_Chr3g0125011 | 36.735 | 98 | 62 | 0 | 342 | 439 | 22 | 119 | 8.15e-12 | 63.2 |
| Msa1416330 | MtrunA17_Chr7g0276681 | 31.551 | 187 | 109 | 6 | 249 | 417 | 112 | 297 | 1.84e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416330 | AT2G03430.1 | 31.551 | 187 | 104 | 2 | 246 | 429 | 40 | 205 | 4.42e-17 | 80.9 |
| Msa1416330 | AT2G03430.1 | 28.571 | 231 | 114 | 5 | 180 | 410 | 40 | 219 | 1.81e-14 | 73.6 |
| Msa1416330 | AT5G60070.1 | 28.309 | 272 | 153 | 8 | 194 | 429 | 39 | 304 | 1.26e-16 | 82.8 |
| Msa1416330 | AT2G14255.1 | 30.682 | 176 | 101 | 3 | 260 | 435 | 65 | 219 | 2.30e-15 | 79.0 |
| Msa1416330 | AT2G14255.1 | 25.581 | 215 | 133 | 4 | 214 | 425 | 55 | 245 | 4.43e-14 | 74.7 |
| Msa1416330 | AT5G20350.1 | 30.000 | 170 | 99 | 2 | 260 | 429 | 72 | 221 | 1.49e-14 | 76.6 |
| Msa1416330 | AT2G28840.1 | 27.500 | 240 | 120 | 7 | 200 | 430 | 25 | 219 | 1.83e-14 | 75.9 |
| Msa1416330 | AT2G31820.1 | 29.520 | 271 | 159 | 10 | 187 | 429 | 151 | 417 | 3.13e-14 | 75.5 |
| Msa1416330 | AT2G31820.1 | 28.151 | 238 | 149 | 9 | 218 | 434 | 152 | 388 | 1.68e-12 | 70.1 |
| Msa1416330 | AT1G07710.2 | 27.734 | 256 | 153 | 9 | 183 | 429 | 62 | 294 | 4.00e-14 | 75.1 |
| Msa1416330 | AT1G07710.1 | 27.734 | 256 | 153 | 9 | 183 | 429 | 62 | 294 | 4.00e-14 | 75.1 |
| Msa1416330 | AT1G05640.1 | 31.081 | 296 | 168 | 13 | 167 | 429 | 89 | 381 | 7.59e-14 | 74.3 |
| Msa1416330 | AT5G57740.1 | 29.412 | 204 | 119 | 6 | 255 | 437 | 53 | 252 | 2.38e-13 | 72.4 |
| Msa1416330 | AT3G04710.3 | 33.149 | 181 | 95 | 6 | 257 | 435 | 283 | 439 | 7.02e-13 | 71.2 |
| Msa1416330 | AT3G04710.2 | 33.149 | 181 | 95 | 6 | 257 | 435 | 59 | 215 | 1.10e-12 | 70.1 |
| Msa1416330 | AT3G04710.1 | 33.149 | 181 | 95 | 6 | 257 | 435 | 59 | 215 | 1.19e-12 | 70.1 |
| Msa1416330 | AT5G02620.5 | 27.801 | 241 | 139 | 8 | 194 | 421 | 24 | 242 | 1.35e-12 | 70.1 |
| Msa1416330 | AT5G02620.2 | 27.801 | 241 | 139 | 8 | 194 | 421 | 24 | 242 | 1.35e-12 | 70.1 |
| Msa1416330 | AT5G02620.4 | 26.384 | 307 | 183 | 12 | 161 | 449 | 24 | 305 | 7.13e-12 | 67.8 |
| Msa1416330 | AT5G02620.1 | 26.384 | 307 | 183 | 12 | 161 | 449 | 24 | 305 | 7.13e-12 | 67.8 |
| Msa1416330 | AT5G02620.3 | 26.384 | 307 | 183 | 12 | 161 | 449 | 24 | 305 | 7.13e-12 | 67.8 |
| Msa1416330 | AT2G26650.2 | 29.714 | 175 | 100 | 3 | 244 | 418 | 437 | 588 | 1.84e-11 | 67.0 |
| Msa1416330 | AT2G26650.1 | 28.571 | 175 | 102 | 2 | 244 | 418 | 542 | 693 | 2.07e-11 | 67.0 |
| Msa1416330 | AT5G07270.1 | 28.643 | 199 | 111 | 5 | 255 | 429 | 47 | 238 | 3.70e-11 | 65.5 |
| Msa1416330 | AT5G14230.1 | 27.778 | 306 | 186 | 12 | 153 | 429 | 303 | 602 | 4.72e-11 | 65.5 |
| Msa1416330 | AT5G12320.1 | 31.731 | 104 | 71 | 0 | 336 | 439 | 7 | 110 | 5.49e-11 | 60.8 |
| Msa1416330 | AT5G14230.2 | 27.778 | 306 | 186 | 12 | 153 | 429 | 143 | 442 | 7.59e-11 | 64.7 |
Find 87 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACAAAGGTGGTTGATTA+AGG | 0.254768 | tig0024340:+5691 | None:intergenic |
| CTGAAGCTTCTTGCAGCTAA+TGG | 0.286643 | tig0024340:-5300 | Msa1416330:CDS |
| CTTGTTTGGTGTACTACATT+GGG | 0.316912 | tig0024340:-4908 | Msa1416330:CDS |
| ATCGTCTGTAGTGGCTTTAC+CGG | 0.321963 | tig0024340:+5626 | None:intergenic |
| TGAATCTTTCAGCGACGAAT+TGG | 0.365290 | tig0024340:-5196 | Msa1416330:CDS |
| ATTCCGTTTGCAATAAGAAC+AGG | 0.367201 | tig0024340:-5336 | Msa1416330:CDS |
| CACGCGCTGAAGAAGTGTTT+AGG | 0.372386 | tig0024340:-4847 | Msa1416330:CDS |
| TTGCATTGTGCTGCTGAAGC+TGG | 0.388322 | tig0024340:-4679 | Msa1416330:CDS |
| AGTGGTCACACGCGCTTGTT+TGG | 0.388536 | tig0024340:-4922 | Msa1416330:CDS |
| TGCAGTTATAACCGTCGTTT+TGG | 0.395549 | tig0024340:-5559 | Msa1416330:CDS |
| TGTTGGGTTTGTTGTTGTTA+AGG | 0.397778 | tig0024340:+5788 | None:intergenic |
| GCTTGTTTGGTGTACTACAT+TGG | 0.398911 | tig0024340:-4909 | Msa1416330:CDS |
| TCACTCGCTGCCACGTGAAC+TGG | 0.399901 | tig0024340:+5141 | None:intergenic |
| CGACGAATTGGATGTGAATT+CGG | 0.401629 | tig0024340:-5184 | Msa1416330:CDS |
| GAGTGGTGGGATTACTGATA+AGG | 0.420907 | tig0024340:+5746 | None:intergenic |
| TTGTTGATTGAAAAGGTTGT+TGG | 0.422808 | tig0024340:+5771 | None:intergenic |
| TTCCCTGTTCTTATTGCAAA+CGG | 0.423986 | tig0024340:+5333 | None:intergenic |
| AGTGGTGGGATTACTGATAA+GGG | 0.424185 | tig0024340:+5747 | None:intergenic |
| ACGCGCTGAAGAAGTGTTTA+GGG | 0.432430 | tig0024340:-4846 | Msa1416330:CDS |
| TGTTGATTGAAAAGGTTGTT+GGG | 0.435252 | tig0024340:+5772 | None:intergenic |
| CTACATTGGGCTTCATTCAA+AGG | 0.464048 | tig0024340:-4778 | Msa1416330:CDS |
| TAAGGGTTTGTTGATTGAAA+AGG | 0.465974 | tig0024340:+5764 | None:intergenic |
| TGAAACTCGCGGTTGAAAGC+GGG | 0.467803 | tig0024340:-5434 | Msa1416330:CDS |
| ATGAAACTCGCGGTTGAAAG+CGG | 0.472267 | tig0024340:-5435 | Msa1416330:CDS |
| TGGGTGGAGCCCACTACATT+GGG | 0.483776 | tig0024340:-4791 | Msa1416330:CDS |
| TTGAATGAAGCCCAATGTAG+TGG | 0.486452 | tig0024340:+4781 | None:intergenic |
| TACATTGGGCTTCATTCAAA+GGG | 0.487037 | tig0024340:-4777 | Msa1416330:CDS |
| GGCTTTACCGGTTGGTAACA+TGG | 0.487305 | tig0024340:+5638 | None:intergenic |
| TGGACATTTACAAGTTGCAT+TGG | 0.499069 | tig0024340:-4659 | Msa1416330:CDS |
| CGTCGTCTCTTTAACAAACC+TGG | 0.511564 | tig0024340:-5600 | Msa1416330:CDS |
| TCTGTAGTGGCTTTACCGGT+TGG | 0.516796 | tig0024340:+5630 | None:intergenic |
| ATGGGTGGAGCCCACTACAT+TGG | 0.517641 | tig0024340:-4792 | Msa1416330:CDS |
| CTGAAGAAGTGTTTAGGGGA+AGG | 0.519433 | tig0024340:-4841 | Msa1416330:CDS |
| GTTGATAGTGTTGATGATGC+TGG | 0.521848 | tig0024340:-4712 | Msa1416330:CDS |
| TTTGCACGAAGCTGCAACAA+TGG | 0.526496 | tig0024340:-5247 | Msa1416330:CDS |
| TCACGGAAAACGTGGGGACC+AGG | 0.526974 | tig0024340:+5582 | None:intergenic |
| GAAGAAGTGTTTAGGGGAAG+GGG | 0.527190 | tig0024340:-4839 | Msa1416330:CDS |
| TGAATAGTAAAGATCAGAAT+GGG | 0.527705 | tig0024340:-4810 | Msa1416330:CDS |
| CGAACGGTGATGACGTCAGC+AGG | 0.533305 | tig0024340:+5666 | None:intergenic |
| CGAACCTCCATGTTACCAAC+CGG | 0.541438 | tig0024340:-5645 | Msa1416330:CDS |
| CATCACCACCATGGATAGGT+TGG | 0.547063 | tig0024340:-5916 | None:intergenic |
| GTGAATAGTAAAGATCAGAA+TGG | 0.548627 | tig0024340:-4811 | Msa1416330:CDS |
| TGAAGAAGTGTTTAGGGGAA+GGG | 0.558826 | tig0024340:-4840 | Msa1416330:CDS |
| TTCGACGCTGCATGATGAAG+TGG | 0.565036 | tig0024340:+5042 | None:intergenic |
| AAATACGCAAGAGAAATAAA+CGG | 0.568319 | tig0024340:-4973 | Msa1416330:CDS |
| TCTAAAATTCACATCTCCAC+CGG | 0.573420 | tig0024340:+5380 | None:intergenic |
| TAACTGCATCACGGAAAACG+TGG | 0.574738 | tig0024340:+5574 | None:intergenic |
| GAAGTGTTTAGGGGAAGGGG+CGG | 0.580140 | tig0024340:-4836 | Msa1416330:CDS |
| TCCACCGGCGGCGATAAGAT+CGG | 0.585692 | tig0024340:+5395 | None:intergenic |
| TAACCATCACCACCATGGAT+AGG | 0.591904 | tig0024340:-5920 | None:intergenic |
| TTCCGTTTGCAATAAGAACA+GGG | 0.592729 | tig0024340:-5335 | Msa1416330:CDS |
| ATGTTGATGAAGAGAGTGGT+GGG | 0.599092 | tig0024340:+5733 | None:intergenic |
| TTTGTTGGAACATGGTGCTG+AGG | 0.600880 | tig0024340:-4734 | Msa1416330:CDS |
| TTGTTTGGTGTACTACATTG+GGG | 0.602036 | tig0024340:-4907 | Msa1416330:CDS |
| GTTCACGTGGCAGCGAGTGA+AGG | 0.604991 | tig0024340:-5138 | Msa1416330:CDS |
| TGAATGAAGCCCAATGTAGT+GGG | 0.611394 | tig0024340:+4782 | None:intergenic |
| AACAGCGTTTGAAATAGCAT+CGG | 0.612401 | tig0024340:-4947 | Msa1416330:CDS |
| GCTTCAGCAGCACAATGCAA+AGG | 0.613566 | tig0024340:+4682 | None:intergenic |
| GATAACAAACTCAGCGACGG+TGG | 0.615331 | tig0024340:+5530 | None:intergenic |
| AACTGCATCACGGAAAACGT+GGG | 0.618543 | tig0024340:+5575 | None:intergenic |
| TGGTAACATGGAGGTTCGAA+CGG | 0.618785 | tig0024340:+5650 | None:intergenic |
| TGTCCACCGTCGAGAATCAA+CGG | 0.621480 | tig0024340:+5065 | None:intergenic |
| ACGTCAGCAGGTTCAGACAA+AGG | 0.630951 | tig0024340:+5678 | None:intergenic |
| TTTGAAATAGCATCGGAGAG+TGG | 0.632198 | tig0024340:-4940 | Msa1416330:CDS |
| ATGCAGAATCAACGATTCAG+TGG | 0.632543 | tig0024340:-5277 | Msa1416330:CDS |
| AGGGAGAATAAAGAGTGTCA+AGG | 0.637144 | tig0024340:-4758 | Msa1416330:CDS |
| CGCGCTGAAGAAGTGTTTAG+GGG | 0.639372 | tig0024340:-4845 | Msa1416330:CDS |
| ATAGTAAAGATCAGAATGGG+TGG | 0.645517 | tig0024340:-4807 | Msa1416330:CDS |
| ACGACGGAGATCGTCTGTAG+TGG | 0.650285 | tig0024340:+5617 | None:intergenic |
| TAAGGAAACTGCAACAGACA+TGG | 0.651639 | tig0024340:+5806 | None:intergenic |
| GAGGTTTGTGAGCTTGAACG+AGG | 0.657050 | tig0024340:+5836 | None:intergenic |
| CAGGTTTGTTAAAGAGACGA+CGG | 0.657239 | tig0024340:+5601 | None:intergenic |
| AATGATGACACCAGTTCACG+TGG | 0.662960 | tig0024340:-5151 | Msa1416330:CDS |
| CACGAATTTGATGAAACTCG+CGG | 0.663191 | tig0024340:-5445 | Msa1416330:CDS |
| ATAACAAACTCAGCGACGGT+GGG | 0.664181 | tig0024340:+5531 | None:intergenic |
| CAACAGACATGGTGTGCATG+AGG | 0.670248 | tig0024340:+5817 | None:intergenic |
| AAAATTCACATCTCCACCGG+CGG | 0.675896 | tig0024340:+5383 | None:intergenic |
| CTAACGCCGTTGATTCTCGA+CGG | 0.675903 | tig0024340:-5071 | Msa1416330:CDS |
| TGAGATAACAAACTCAGCGA+CGG | 0.679630 | tig0024340:+5527 | None:intergenic |
| TATGTTGATGAAGAGAGTGG+TGG | 0.683276 | tig0024340:+5732 | None:intergenic |
| GTGTATGTTGATGAAGAGAG+TGG | 0.692828 | tig0024340:+5729 | None:intergenic |
| ACTGCATCACGGAAAACGTG+GGG | 0.694469 | tig0024340:+5576 | None:intergenic |
| CGACGGTTATAACTGCATCA+CGG | 0.697949 | tig0024340:+5565 | None:intergenic |
| ACGCCGTTGATTCTCGACGG+TGG | 0.707122 | tig0024340:-5068 | Msa1416330:CDS |
| TTTACCGGTTGGTAACATGG+AGG | 0.712639 | tig0024340:+5641 | None:intergenic |
| GGTGGGACCTACCAAAACGA+CGG | 0.719809 | tig0024340:+5548 | None:intergenic |
| TCAGCAGGTTCAGACAAAGG+TGG | 0.732780 | tig0024340:+5681 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAACATTTTTGGTTTTTC+TGG | + | tig0024340:4584-4603 | None:intergenic | 25.0% |
| !!! | GTGAATTTTAGAGATTCAAA+CGG | - | tig0024340:5071-5090 | Msa1416330:CDS | 25.0% |
| !! | ATTGAGTTTTTCGTTTCAAT+CGG | - | tig0024340:5338-5357 | Msa1416330:CDS | 25.0% |
| ! | GTCGAAAAATCATTTAAAAG+CGG | - | tig0024340:5415-5434 | Msa1416330:CDS | 25.0% |
| ! | AAATACGCAAGAGAAATAAA+CGG | - | tig0024340:5467-5486 | Msa1416330:CDS | 25.0% |
| ! | TGAATAGTAAAGATCAGAAT+GGG | - | tig0024340:5630-5649 | Msa1416330:CDS | 25.0% |
| !!! | AACAACATTTTTGGTTTTTC+TGG | + | tig0024340:4584-4603 | None:intergenic | 25.0% |
| !!! | GTGAATTTTAGAGATTCAAA+CGG | - | tig0024340:5071-5090 | Msa1416330:CDS | 25.0% |
| !! | ATTGAGTTTTTCGTTTCAAT+CGG | - | tig0024340:5338-5357 | Msa1416330:CDS | 25.0% |
| ! | GTCGAAAAATCATTTAAAAG+CGG | - | tig0024340:5415-5434 | Msa1416330:CDS | 25.0% |
| ! | AAATACGCAAGAGAAATAAA+CGG | - | tig0024340:5467-5486 | Msa1416330:CDS | 25.0% |
| ! | TGAATAGTAAAGATCAGAAT+GGG | - | tig0024340:5630-5649 | Msa1416330:CDS | 25.0% |
| !!! | CATTTTTGGTTTTTCTGGAA+GGG | + | tig0024340:4579-4598 | None:intergenic | 30.0% |
| !!! | ACATTTTTGGTTTTTCTGGA+AGG | + | tig0024340:4580-4599 | None:intergenic | 30.0% |
| ! | TGTTGATTGAAAAGGTTGTT+GGG | + | tig0024340:4671-4690 | None:intergenic | 30.0% |
| ! | TTGTTGATTGAAAAGGTTGT+TGG | + | tig0024340:4672-4691 | None:intergenic | 30.0% |
| !! | TAAGGGTTTGTTGATTGAAA+AGG | + | tig0024340:4679-4698 | None:intergenic | 30.0% |
| ! | TCTTTTCACGAAAGCTATAT+CGG | - | tig0024340:4953-4972 | Msa1416330:CDS | 30.0% |
| GTGAATAGTAAAGATCAGAA+TGG | - | tig0024340:5629-5648 | Msa1416330:CDS | 30.0% | |
| !! | TGCTTTTGAAAAGAAGCAAT+TGG | + | tig0024340:5863-5882 | None:intergenic | 30.0% |
| !!! | CATTTTTGGTTTTTCTGGAA+GGG | + | tig0024340:4579-4598 | None:intergenic | 30.0% |
| !!! | ACATTTTTGGTTTTTCTGGA+AGG | + | tig0024340:4580-4599 | None:intergenic | 30.0% |
| ! | TGTTGATTGAAAAGGTTGTT+GGG | + | tig0024340:4671-4690 | None:intergenic | 30.0% |
| ! | TTGTTGATTGAAAAGGTTGT+TGG | + | tig0024340:4672-4691 | None:intergenic | 30.0% |
| !! | TAAGGGTTTGTTGATTGAAA+AGG | + | tig0024340:4679-4698 | None:intergenic | 30.0% |
| ! | TCTTTTCACGAAAGCTATAT+CGG | - | tig0024340:4953-4972 | Msa1416330:CDS | 30.0% |
| GTGAATAGTAAAGATCAGAA+TGG | - | tig0024340:5629-5648 | Msa1416330:CDS | 30.0% | |
| !! | TGCTTTTGAAAAGAAGCAAT+TGG | + | tig0024340:5863-5882 | None:intergenic | 30.0% |
| ! | TGAACGAGGAACAACATTTT+TGG | + | tig0024340:4593-4612 | None:intergenic | 35.0% |
| !! | TGTTGGGTTTGTTGTTGTTA+AGG | + | tig0024340:4655-4674 | None:intergenic | 35.0% |
| ! | TCTAAAATTCACATCTCCAC+CGG | + | tig0024340:5063-5082 | None:intergenic | 35.0% |
| ATTCCGTTTGCAATAAGAAC+AGG | - | tig0024340:5104-5123 | Msa1416330:CDS | 35.0% | |
| TTCCGTTTGCAATAAGAACA+GGG | - | tig0024340:5105-5124 | Msa1416330:CDS | 35.0% | |
| TTCCCTGTTCTTATTGCAAA+CGG | + | tig0024340:5110-5129 | None:intergenic | 35.0% | |
| ! | TTCTCTTGCGTATTTTACGT+CGG | + | tig0024340:5462-5481 | None:intergenic | 35.0% |
| ! | AACAGCGTTTGAAATAGCAT+CGG | - | tig0024340:5493-5512 | Msa1416330:CDS | 35.0% |
| !! | CTTGTTTGGTGTACTACATT+GGG | - | tig0024340:5532-5551 | Msa1416330:CDS | 35.0% |
| !! | TTGTTTGGTGTACTACATTG+GGG | - | tig0024340:5533-5552 | Msa1416330:CDS | 35.0% |
| ATAGTAAAGATCAGAATGGG+TGG | - | tig0024340:5633-5652 | Msa1416330:CDS | 35.0% | |
| TACATTGGGCTTCATTCAAA+GGG | - | tig0024340:5663-5682 | Msa1416330:CDS | 35.0% | |
| !!! | AAAGAGTGTCAAGGTTTTGT+TGG | - | tig0024340:5691-5710 | Msa1416330:CDS | 35.0% |
| TGGACATTTACAAGTTGCAT+TGG | - | tig0024340:5781-5800 | Msa1416330:CDS | 35.0% | |
| ! | TGAACGAGGAACAACATTTT+TGG | + | tig0024340:4593-4612 | None:intergenic | 35.0% |
| !! | TGTTGGGTTTGTTGTTGTTA+AGG | + | tig0024340:4655-4674 | None:intergenic | 35.0% |
| ! | TCTAAAATTCACATCTCCAC+CGG | + | tig0024340:5063-5082 | None:intergenic | 35.0% |
| ATTCCGTTTGCAATAAGAAC+AGG | - | tig0024340:5104-5123 | Msa1416330:CDS | 35.0% | |
| TTCCGTTTGCAATAAGAACA+GGG | - | tig0024340:5105-5124 | Msa1416330:CDS | 35.0% | |
| TTCCCTGTTCTTATTGCAAA+CGG | + | tig0024340:5110-5129 | None:intergenic | 35.0% | |
| ! | TTCTCTTGCGTATTTTACGT+CGG | + | tig0024340:5462-5481 | None:intergenic | 35.0% |
| ! | AACAGCGTTTGAAATAGCAT+CGG | - | tig0024340:5493-5512 | Msa1416330:CDS | 35.0% |
| !! | CTTGTTTGGTGTACTACATT+GGG | - | tig0024340:5532-5551 | Msa1416330:CDS | 35.0% |
| !! | TTGTTTGGTGTACTACATTG+GGG | - | tig0024340:5533-5552 | Msa1416330:CDS | 35.0% |
| ATAGTAAAGATCAGAATGGG+TGG | - | tig0024340:5633-5652 | Msa1416330:CDS | 35.0% | |
| TACATTGGGCTTCATTCAAA+GGG | - | tig0024340:5663-5682 | Msa1416330:CDS | 35.0% | |
| !!! | AAAGAGTGTCAAGGTTTTGT+TGG | - | tig0024340:5691-5710 | Msa1416330:CDS | 35.0% |
| TGGACATTTACAAGTTGCAT+TGG | - | tig0024340:5781-5800 | Msa1416330:CDS | 35.0% | |
| !!! | TTTGGTTTTTCTGGAAGGGA+AGG | + | tig0024340:4575-4594 | None:intergenic | 40.0% |
| TAAGGAAACTGCAACAGACA+TGG | + | tig0024340:4637-4656 | None:intergenic | 40.0% | |
| ! | AGTGGTGGGATTACTGATAA+GGG | + | tig0024340:4696-4715 | None:intergenic | 40.0% |
| ! | ATGTTGATGAAGAGAGTGGT+GGG | + | tig0024340:4710-4729 | None:intergenic | 40.0% |
| ! | TATGTTGATGAAGAGAGTGG+TGG | + | tig0024340:4711-4730 | None:intergenic | 40.0% |
| ! | GTGTATGTTGATGAAGAGAG+TGG | + | tig0024340:4714-4733 | None:intergenic | 40.0% |
| CAGACAAAGGTGGTTGATTA+AGG | + | tig0024340:4752-4771 | None:intergenic | 40.0% | |
| !! | CAGGTTTGTTAAAGAGACGA+CGG | + | tig0024340:4842-4861 | None:intergenic | 40.0% |
| ! | TGCAGTTATAACCGTCGTTT+TGG | - | tig0024340:4881-4900 | Msa1416330:CDS | 40.0% |
| !! | GTTATAACCGTCGTTTTGGT+AGG | - | tig0024340:4885-4904 | Msa1416330:CDS | 40.0% |
| TGAGATAACAAACTCAGCGA+CGG | + | tig0024340:4916-4935 | None:intergenic | 40.0% | |
| CACGAATTTGATGAAACTCG+CGG | - | tig0024340:4995-5014 | Msa1416330:CDS | 40.0% | |
| ATGCAGAATCAACGATTCAG+TGG | - | tig0024340:5163-5182 | Msa1416330:CDS | 40.0% | |
| TGAATCTTTCAGCGACGAAT+TGG | - | tig0024340:5244-5263 | Msa1416330:CDS | 40.0% | |
| CGACGAATTGGATGTGAATT+CGG | - | tig0024340:5256-5275 | Msa1416330:CDS | 40.0% | |
| ! | GAGTTTTTCGTTTCAATCGG+AGG | - | tig0024340:5341-5360 | Msa1416330:CDS | 40.0% |
| ! | TTTGAAATAGCATCGGAGAG+TGG | - | tig0024340:5500-5519 | Msa1416330:CDS | 40.0% |
| !! | GCTTGTTTGGTGTACTACAT+TGG | - | tig0024340:5531-5550 | Msa1416330:CDS | 40.0% |
| !! | TGAAGAAGTGTTTAGGGGAA+GGG | - | tig0024340:5600-5619 | Msa1416330:CDS | 40.0% |
| TGAATGAAGCCCAATGTAGT+GGG | + | tig0024340:5661-5680 | None:intergenic | 40.0% | |
| TTGAATGAAGCCCAATGTAG+TGG | + | tig0024340:5662-5681 | None:intergenic | 40.0% | |
| CTACATTGGGCTTCATTCAA+AGG | - | tig0024340:5662-5681 | Msa1416330:CDS | 40.0% | |
| !! | AGGGAGAATAAAGAGTGTCA+AGG | - | tig0024340:5682-5701 | Msa1416330:CDS | 40.0% |
| !!! | GTCAAGGTTTTGTTGGAACA+TGG | - | tig0024340:5698-5717 | Msa1416330:CDS | 40.0% |
| !! | GTTGATAGTGTTGATGATGC+TGG | - | tig0024340:5728-5747 | Msa1416330:CDS | 40.0% |
| !!! | GCATTGGTTTTGATTGCTCA+TGG | - | tig0024340:5797-5816 | Msa1416330:CDS | 40.0% |
| !!! | TTGGTTTTGATTGCTCATGG+TGG | - | tig0024340:5800-5819 | Msa1416330:CDS | 40.0% |
| !!! | TTTGGTTTTTCTGGAAGGGA+AGG | + | tig0024340:4575-4594 | None:intergenic | 40.0% |
| TAAGGAAACTGCAACAGACA+TGG | + | tig0024340:4637-4656 | None:intergenic | 40.0% | |
| ! | AGTGGTGGGATTACTGATAA+GGG | + | tig0024340:4696-4715 | None:intergenic | 40.0% |
| ! | ATGTTGATGAAGAGAGTGGT+GGG | + | tig0024340:4710-4729 | None:intergenic | 40.0% |
| ! | TATGTTGATGAAGAGAGTGG+TGG | + | tig0024340:4711-4730 | None:intergenic | 40.0% |
| ! | GTGTATGTTGATGAAGAGAG+TGG | + | tig0024340:4714-4733 | None:intergenic | 40.0% |
| CAGACAAAGGTGGTTGATTA+AGG | + | tig0024340:4752-4771 | None:intergenic | 40.0% | |
| !! | CAGGTTTGTTAAAGAGACGA+CGG | + | tig0024340:4842-4861 | None:intergenic | 40.0% |
| ! | TGCAGTTATAACCGTCGTTT+TGG | - | tig0024340:4881-4900 | Msa1416330:CDS | 40.0% |
| !! | GTTATAACCGTCGTTTTGGT+AGG | - | tig0024340:4885-4904 | Msa1416330:CDS | 40.0% |
| TGAGATAACAAACTCAGCGA+CGG | + | tig0024340:4916-4935 | None:intergenic | 40.0% | |
| CACGAATTTGATGAAACTCG+CGG | - | tig0024340:4995-5014 | Msa1416330:CDS | 40.0% | |
| ATGCAGAATCAACGATTCAG+TGG | - | tig0024340:5163-5182 | Msa1416330:CDS | 40.0% | |
| TGAATCTTTCAGCGACGAAT+TGG | - | tig0024340:5244-5263 | Msa1416330:CDS | 40.0% | |
| CGACGAATTGGATGTGAATT+CGG | - | tig0024340:5256-5275 | Msa1416330:CDS | 40.0% | |
| ! | GAGTTTTTCGTTTCAATCGG+AGG | - | tig0024340:5341-5360 | Msa1416330:CDS | 40.0% |
| ! | TTTGAAATAGCATCGGAGAG+TGG | - | tig0024340:5500-5519 | Msa1416330:CDS | 40.0% |
| !! | GCTTGTTTGGTGTACTACAT+TGG | - | tig0024340:5531-5550 | Msa1416330:CDS | 40.0% |
| !! | TGAAGAAGTGTTTAGGGGAA+GGG | - | tig0024340:5600-5619 | Msa1416330:CDS | 40.0% |
| TGAATGAAGCCCAATGTAGT+GGG | + | tig0024340:5661-5680 | None:intergenic | 40.0% | |
| TTGAATGAAGCCCAATGTAG+TGG | + | tig0024340:5662-5681 | None:intergenic | 40.0% | |
| CTACATTGGGCTTCATTCAA+AGG | - | tig0024340:5662-5681 | Msa1416330:CDS | 40.0% | |
| !! | AGGGAGAATAAAGAGTGTCA+AGG | - | tig0024340:5682-5701 | Msa1416330:CDS | 40.0% |
| !!! | GTCAAGGTTTTGTTGGAACA+TGG | - | tig0024340:5698-5717 | Msa1416330:CDS | 40.0% |
| !! | GTTGATAGTGTTGATGATGC+TGG | - | tig0024340:5728-5747 | Msa1416330:CDS | 40.0% |
| !!! | GCATTGGTTTTGATTGCTCA+TGG | - | tig0024340:5797-5816 | Msa1416330:CDS | 40.0% |
| !!! | TTGGTTTTGATTGCTCATGG+TGG | - | tig0024340:5800-5819 | Msa1416330:CDS | 40.0% |
| ! | GAGTGGTGGGATTACTGATA+AGG | + | tig0024340:4697-4716 | None:intergenic | 45.0% |
| TGGTAACATGGAGGTTCGAA+CGG | + | tig0024340:4793-4812 | None:intergenic | 45.0% | |
| !! | TTTACCGGTTGGTAACATGG+AGG | + | tig0024340:4802-4821 | None:intergenic | 45.0% |
| ! | ATCGTCTGTAGTGGCTTTAC+CGG | + | tig0024340:4817-4836 | None:intergenic | 45.0% |
| CGTCGTCTCTTTAACAAACC+TGG | - | tig0024340:4840-4859 | Msa1416330:CDS | 45.0% | |
| AACTGCATCACGGAAAACGT+GGG | + | tig0024340:4868-4887 | None:intergenic | 45.0% | |
| TAACTGCATCACGGAAAACG+TGG | + | tig0024340:4869-4888 | None:intergenic | 45.0% | |
| CGACGGTTATAACTGCATCA+CGG | + | tig0024340:4878-4897 | None:intergenic | 45.0% | |
| ATAACAAACTCAGCGACGGT+GGG | + | tig0024340:4912-4931 | None:intergenic | 45.0% | |
| ATGAAACTCGCGGTTGAAAG+CGG | - | tig0024340:5005-5024 | Msa1416330:CDS | 45.0% | |
| AAAATTCACATCTCCACCGG+CGG | + | tig0024340:5060-5079 | None:intergenic | 45.0% | |
| CTGAAGCTTCTTGCAGCTAA+TGG | - | tig0024340:5140-5159 | Msa1416330:CDS | 45.0% | |
| TTTGCACGAAGCTGCAACAA+TGG | - | tig0024340:5193-5212 | Msa1416330:CDS | 45.0% | |
| AATGATGACACCAGTTCACG+TGG | - | tig0024340:5289-5308 | Msa1416330:CDS | 45.0% | |
| !! | ACGCGCTGAAGAAGTGTTTA+GGG | - | tig0024340:5594-5613 | Msa1416330:CDS | 45.0% |
| !! | CTGAAGAAGTGTTTAGGGGA+AGG | - | tig0024340:5599-5618 | Msa1416330:CDS | 45.0% |
| !! | GAAGAAGTGTTTAGGGGAAG+GGG | - | tig0024340:5601-5620 | Msa1416330:CDS | 45.0% |
| ! | TTTGTTGGAACATGGTGCTG+AGG | - | tig0024340:5706-5725 | Msa1416330:CDS | 45.0% |
| ! | GAGTGGTGGGATTACTGATA+AGG | + | tig0024340:4697-4716 | None:intergenic | 45.0% |
| TGGTAACATGGAGGTTCGAA+CGG | + | tig0024340:4793-4812 | None:intergenic | 45.0% | |
| !! | TTTACCGGTTGGTAACATGG+AGG | + | tig0024340:4802-4821 | None:intergenic | 45.0% |
| ! | ATCGTCTGTAGTGGCTTTAC+CGG | + | tig0024340:4817-4836 | None:intergenic | 45.0% |
| CGTCGTCTCTTTAACAAACC+TGG | - | tig0024340:4840-4859 | Msa1416330:CDS | 45.0% | |
| AACTGCATCACGGAAAACGT+GGG | + | tig0024340:4868-4887 | None:intergenic | 45.0% | |
| TAACTGCATCACGGAAAACG+TGG | + | tig0024340:4869-4888 | None:intergenic | 45.0% | |
| CGACGGTTATAACTGCATCA+CGG | + | tig0024340:4878-4897 | None:intergenic | 45.0% | |
| ATAACAAACTCAGCGACGGT+GGG | + | tig0024340:4912-4931 | None:intergenic | 45.0% | |
| ATGAAACTCGCGGTTGAAAG+CGG | - | tig0024340:5005-5024 | Msa1416330:CDS | 45.0% | |
| AAAATTCACATCTCCACCGG+CGG | + | tig0024340:5060-5079 | None:intergenic | 45.0% | |
| CTGAAGCTTCTTGCAGCTAA+TGG | - | tig0024340:5140-5159 | Msa1416330:CDS | 45.0% | |
| TTTGCACGAAGCTGCAACAA+TGG | - | tig0024340:5193-5212 | Msa1416330:CDS | 45.0% | |
| AATGATGACACCAGTTCACG+TGG | - | tig0024340:5289-5308 | Msa1416330:CDS | 45.0% | |
| !! | ACGCGCTGAAGAAGTGTTTA+GGG | - | tig0024340:5594-5613 | Msa1416330:CDS | 45.0% |
| !! | CTGAAGAAGTGTTTAGGGGA+AGG | - | tig0024340:5599-5618 | Msa1416330:CDS | 45.0% |
| !! | GAAGAAGTGTTTAGGGGAAG+GGG | - | tig0024340:5601-5620 | Msa1416330:CDS | 45.0% |
| ! | TTTGTTGGAACATGGTGCTG+AGG | - | tig0024340:5706-5725 | Msa1416330:CDS | 45.0% |
| GAGGTTTGTGAGCTTGAACG+AGG | + | tig0024340:4607-4626 | None:intergenic | 50.0% | |
| CAACAGACATGGTGTGCATG+AGG | + | tig0024340:4626-4645 | None:intergenic | 50.0% | |
| TCAGCAGGTTCAGACAAAGG+TGG | + | tig0024340:4762-4781 | None:intergenic | 50.0% | |
| ACGTCAGCAGGTTCAGACAA+AGG | + | tig0024340:4765-4784 | None:intergenic | 50.0% | |
| CGAACCTCCATGTTACCAAC+CGG | - | tig0024340:4795-4814 | Msa1416330:CDS | 50.0% | |
| !! | GGCTTTACCGGTTGGTAACA+TGG | + | tig0024340:4805-4824 | None:intergenic | 50.0% |
| ! | TCTGTAGTGGCTTTACCGGT+TGG | + | tig0024340:4813-4832 | None:intergenic | 50.0% |
| ACTGCATCACGGAAAACGTG+GGG | + | tig0024340:4867-4886 | None:intergenic | 50.0% | |
| GATAACAAACTCAGCGACGG+TGG | + | tig0024340:4913-4932 | None:intergenic | 50.0% | |
| TGAAACTCGCGGTTGAAAGC+GGG | - | tig0024340:5006-5025 | Msa1416330:CDS | 50.0% | |
| !! | CTAACGCCGTTGATTCTCGA+CGG | - | tig0024340:5369-5388 | Msa1416330:CDS | 50.0% |
| TGTCCACCGTCGAGAATCAA+CGG | + | tig0024340:5378-5397 | None:intergenic | 50.0% | |
| TTCGACGCTGCATGATGAAG+TGG | + | tig0024340:5401-5420 | None:intergenic | 50.0% | |
| !! | CACGCGCTGAAGAAGTGTTT+AGG | - | tig0024340:5593-5612 | Msa1416330:CDS | 50.0% |
| !! | CGCGCTGAAGAAGTGTTTAG+GGG | - | tig0024340:5595-5614 | Msa1416330:CDS | 50.0% |
| GCTTCAGCAGCACAATGCAA+AGG | + | tig0024340:5761-5780 | None:intergenic | 50.0% | |
| ! | TTGCATTGTGCTGCTGAAGC+TGG | - | tig0024340:5761-5780 | Msa1416330:CDS | 50.0% |
| GAGGTTTGTGAGCTTGAACG+AGG | + | tig0024340:4607-4626 | None:intergenic | 50.0% | |
| CAACAGACATGGTGTGCATG+AGG | + | tig0024340:4626-4645 | None:intergenic | 50.0% | |
| TCAGCAGGTTCAGACAAAGG+TGG | + | tig0024340:4762-4781 | None:intergenic | 50.0% | |
| ACGTCAGCAGGTTCAGACAA+AGG | + | tig0024340:4765-4784 | None:intergenic | 50.0% | |
| CGAACCTCCATGTTACCAAC+CGG | - | tig0024340:4795-4814 | Msa1416330:CDS | 50.0% | |
| !! | GGCTTTACCGGTTGGTAACA+TGG | + | tig0024340:4805-4824 | None:intergenic | 50.0% |
| ! | TCTGTAGTGGCTTTACCGGT+TGG | + | tig0024340:4813-4832 | None:intergenic | 50.0% |
| ACTGCATCACGGAAAACGTG+GGG | + | tig0024340:4867-4886 | None:intergenic | 50.0% | |
| GATAACAAACTCAGCGACGG+TGG | + | tig0024340:4913-4932 | None:intergenic | 50.0% | |
| TGAAACTCGCGGTTGAAAGC+GGG | - | tig0024340:5006-5025 | Msa1416330:CDS | 50.0% | |
| !! | CTAACGCCGTTGATTCTCGA+CGG | - | tig0024340:5369-5388 | Msa1416330:CDS | 50.0% |
| TGTCCACCGTCGAGAATCAA+CGG | + | tig0024340:5378-5397 | None:intergenic | 50.0% | |
| TTCGACGCTGCATGATGAAG+TGG | + | tig0024340:5401-5420 | None:intergenic | 50.0% | |
| !! | CACGCGCTGAAGAAGTGTTT+AGG | - | tig0024340:5593-5612 | Msa1416330:CDS | 50.0% |
| !! | CGCGCTGAAGAAGTGTTTAG+GGG | - | tig0024340:5595-5614 | Msa1416330:CDS | 50.0% |
| GCTTCAGCAGCACAATGCAA+AGG | + | tig0024340:5761-5780 | None:intergenic | 50.0% | |
| ! | TTGCATTGTGCTGCTGAAGC+TGG | - | tig0024340:5761-5780 | Msa1416330:CDS | 50.0% |
| ACGACGGAGATCGTCTGTAG+TGG | + | tig0024340:4826-4845 | None:intergenic | 55.0% | |
| GGTGGGACCTACCAAAACGA+CGG | + | tig0024340:4895-4914 | None:intergenic | 55.0% | |
| AGTGGTCACACGCGCTTGTT+TGG | - | tig0024340:5518-5537 | Msa1416330:CDS | 55.0% | |
| ! | GAAGTGTTTAGGGGAAGGGG+CGG | - | tig0024340:5604-5623 | Msa1416330:CDS | 55.0% |
| ATGGGTGGAGCCCACTACAT+TGG | - | tig0024340:5648-5667 | Msa1416330:CDS | 55.0% | |
| TGGGTGGAGCCCACTACATT+GGG | - | tig0024340:5649-5668 | Msa1416330:CDS | 55.0% | |
| ACGACGGAGATCGTCTGTAG+TGG | + | tig0024340:4826-4845 | None:intergenic | 55.0% | |
| GGTGGGACCTACCAAAACGA+CGG | + | tig0024340:4895-4914 | None:intergenic | 55.0% | |
| AGTGGTCACACGCGCTTGTT+TGG | - | tig0024340:5518-5537 | Msa1416330:CDS | 55.0% | |
| ! | GAAGTGTTTAGGGGAAGGGG+CGG | - | tig0024340:5604-5623 | Msa1416330:CDS | 55.0% |
| ATGGGTGGAGCCCACTACAT+TGG | - | tig0024340:5648-5667 | Msa1416330:CDS | 55.0% | |
| TGGGTGGAGCCCACTACATT+GGG | - | tig0024340:5649-5668 | Msa1416330:CDS | 55.0% | |
| ! | CGAACGGTGATGACGTCAGC+AGG | + | tig0024340:4777-4796 | None:intergenic | 60.0% |
| TCACGGAAAACGTGGGGACC+AGG | + | tig0024340:4861-4880 | None:intergenic | 60.0% | |
| GTCACCGATCTTATCGCCGC+CGG | - | tig0024340:5041-5060 | Msa1416330:CDS | 60.0% | |
| TCCACCGGCGGCGATAAGAT+CGG | + | tig0024340:5048-5067 | None:intergenic | 60.0% | |
| TCACTCGCTGCCACGTGAAC+TGG | + | tig0024340:5302-5321 | None:intergenic | 60.0% | |
| GTTCACGTGGCAGCGAGTGA+AGG | - | tig0024340:5302-5321 | Msa1416330:CDS | 60.0% | |
| !! | ACGCCGTTGATTCTCGACGG+TGG | - | tig0024340:5372-5391 | Msa1416330:CDS | 60.0% |
| ! | CGAACGGTGATGACGTCAGC+AGG | + | tig0024340:4777-4796 | None:intergenic | 60.0% |
| TCACGGAAAACGTGGGGACC+AGG | + | tig0024340:4861-4880 | None:intergenic | 60.0% | |
| GTCACCGATCTTATCGCCGC+CGG | - | tig0024340:5041-5060 | Msa1416330:CDS | 60.0% | |
| TCCACCGGCGGCGATAAGAT+CGG | + | tig0024340:5048-5067 | None:intergenic | 60.0% | |
| TCACTCGCTGCCACGTGAAC+TGG | + | tig0024340:5302-5321 | None:intergenic | 60.0% | |
| GTTCACGTGGCAGCGAGTGA+AGG | - | tig0024340:5302-5321 | Msa1416330:CDS | 60.0% | |
| !! | ACGCCGTTGATTCTCGACGG+TGG | - | tig0024340:5372-5391 | Msa1416330:CDS | 60.0% |
| ACCGATCTTATCGCCGCCGG+TGG | - | tig0024340:5044-5063 | Msa1416330:CDS | 65.0% | |
| ACCGATCTTATCGCCGCCGG+TGG | - | tig0024340:5044-5063 | Msa1416330:CDS | 65.0% | |
| GGGCGACGCGCTTCTACGAG+CGG | - | tig0024340:5553-5572 | Msa1416330:CDS | 70.0% | |
| GCTTCTACGAGCGGCGCGTG+TGG | - | tig0024340:5562-5581 | Msa1416330:CDS | 70.0% | |
| GGGCGACGCGCTTCTACGAG+CGG | - | tig0024340:5553-5572 | Msa1416330:CDS | 70.0% | |
| GCTTCTACGAGCGGCGCGTG+TGG | - | tig0024340:5562-5581 | Msa1416330:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024340 | gene | 4534 | 5928 | 4534 | ID=Msa1416330;Name=Msa1416330 |
| tig0024340 | mRNA | 4534 | 5928 | 4534 | ID=Msa1416330-mRNA-1;Parent=Msa1416330;Name=Msa1416330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|464 |
| tig0024340 | exon | 4534 | 5928 | 4534 | ID=Msa1416330-mRNA-1:exon:22908;Parent=Msa1416330-mRNA-1 |
| tig0024340 | CDS | 4534 | 5928 | 4534 | ID=Msa1416330-mRNA-1:cds;Parent=Msa1416330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
