Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329010 | sp|Q10058|YAM3_SCHPO | 31.910 | 398 | 218 | 14 | 34 | 399 | 1 | 377 | 1.68e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329010 | A0A072V059 | 94.363 | 408 | 21 | 1 | 1 | 408 | 1 | 406 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000310 | Msa1329010 | 0.960874 | 4.719514e-119 | -8.615850e-47 |
| Msa0005500 | Msa1329010 | 0.801088 | 1.062029e-48 | -8.615850e-47 |
| Msa0014970 | Msa1329010 | 0.816130 | 6.478813e-52 | -8.615850e-47 |
| Msa0049670 | Msa1329010 | 0.818592 | 1.809104e-52 | -8.615850e-47 |
| Msa0054110 | Msa1329010 | 0.800662 | 1.297378e-48 | -8.615850e-47 |
| Msa0064440 | Msa1329010 | 0.809099 | 2.237220e-50 | -8.615850e-47 |
| Msa0090350 | Msa1329010 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0619480 | Msa1329010 | 0.806132 | 9.539971e-50 | -8.615850e-47 |
| Msa0623360 | Msa1329010 | 0.834102 | 3.639990e-56 | -8.615850e-47 |
| Msa0625550 | Msa1329010 | 0.817614 | 3.009385e-52 | -8.615850e-47 |
| Msa0635070 | Msa1329010 | 0.838632 | 2.563108e-57 | -8.615850e-47 |
| Msa0639640 | Msa1329010 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0664110 | Msa1329010 | 0.811895 | 5.568644e-51 | -8.615850e-47 |
| Msa0664130 | Msa1329010 | 0.804225 | 2.392555e-49 | -8.615850e-47 |
| Msa0681880 | Msa1329010 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
| Msa0701780 | Msa1329010 | 0.810016 | 1.421357e-50 | -8.615850e-47 |
| Msa0707870 | Msa1329010 | 0.816499 | 5.357914e-52 | -8.615850e-47 |
| Msa0713590 | Msa1329010 | 0.812974 | 3.236162e-51 | -8.615850e-47 |
| Msa0729780 | Msa1329010 | 0.802250 | 6.132730e-49 | -8.615850e-47 |
| Msa0747660 | Msa1329010 | 0.848608 | 5.501199e-60 | -8.615850e-47 |
| Msa0749130 | Msa1329010 | 0.810012 | 1.424389e-50 | -8.615850e-47 |
| Msa0750490 | Msa1329010 | 0.800285 | 1.548562e-48 | -8.615850e-47 |
| Msa0755530 | Msa1329010 | 0.812874 | 3.403960e-51 | -8.615850e-47 |
| Msa0785670 | Msa1329010 | 0.828808 | 7.317081e-55 | -8.615850e-47 |
| Msa0797210 | Msa1329010 | 0.812214 | 4.743749e-51 | -8.615850e-47 |
| Msa0829740 | Msa1329010 | 0.809114 | 2.220768e-50 | -8.615850e-47 |
| Msa0835070 | Msa1329010 | 0.812242 | 4.678860e-51 | -8.615850e-47 |
| Msa0138380 | Msa1329010 | 0.805675 | 1.190498e-49 | -8.615850e-47 |
| Msa0148590 | Msa1329010 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0184030 | Msa1329010 | 0.800166 | 1.637363e-48 | -8.615850e-47 |
| Msa0187560 | Msa1329010 | 0.820143 | 8.016532e-53 | -8.615850e-47 |
| Msa0198140 | Msa1329010 | 0.824573 | 7.502977e-54 | -8.615850e-47 |
| Msa0198220 | Msa1329010 | 0.827816 | 1.269638e-54 | -8.615850e-47 |
| Msa0221940 | Msa1329010 | 0.836196 | 1.078482e-56 | -8.615850e-47 |
| Msa0226580 | Msa1329010 | 0.810932 | 9.011714e-51 | -8.615850e-47 |
| Msa0228360 | Msa1329010 | 0.823565 | 1.293399e-53 | -8.615850e-47 |
| Msa0229420 | Msa1329010 | 0.806916 | 6.519709e-50 | -8.615850e-47 |
| Msa1245300 | Msa1329010 | 0.813927 | 1.998100e-51 | -8.615850e-47 |
| Msa1262740 | Msa1329010 | 0.827320 | 1.669489e-54 | -8.615850e-47 |
| Msa1263610 | Msa1329010 | 0.836420 | 9.455501e-57 | -8.615850e-47 |
| Msa1264140 | Msa1329010 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa1296600 | Msa1329010 | 0.995952 | 1.039648e-221 | -8.615850e-47 |
| Msa1298540 | Msa1329010 | 0.811651 | 6.293938e-51 | -8.615850e-47 |
| Msa1329010 | Msa1329020 | 0.810037 | 1.406345e-50 | -8.615850e-47 |
| Msa1329010 | Msa1329660 | 0.802612 | 5.164985e-49 | -8.615850e-47 |
| Msa1329010 | Msa1332340 | 0.803855 | 2.856361e-49 | -8.615850e-47 |
| Msa1329010 | Msa1343540 | 0.818455 | 1.942932e-52 | -8.615850e-47 |
| Msa1329010 | Msa1346920 | 0.813935 | 1.989178e-51 | -8.615850e-47 |
| Msa1329010 | Msa1349410 | 0.808573 | 2.898925e-50 | -8.615850e-47 |
| Msa1329010 | Msa1351590 | 0.824711 | 6.959879e-54 | -8.615850e-47 |
| Msa1329010 | Msa1374210 | 0.823131 | 1.634017e-53 | -8.615850e-47 |
| Msa1329010 | Msa1381720 | 0.807924 | 3.985231e-50 | -8.615850e-47 |
| Msa1329010 | Msa1393600 | 0.808647 | 2.795019e-50 | -8.615850e-47 |
| Msa1329010 | Msa1405190 | 0.831656 | 1.475155e-55 | -8.615850e-47 |
| Msa1329010 | Msa1433380 | 0.813759 | 2.175338e-51 | -8.615850e-47 |
| Msa1329010 | Msa1454940 | 0.818489 | 1.908336e-52 | -8.615850e-47 |
| Msa1329010 | Msa1456410 | 0.805323 | 1.411093e-49 | -8.615850e-47 |
| Msa1329010 | Msa1458280 | 0.831184 | 1.927868e-55 | -8.615850e-47 |
| Msa0373110 | Msa1329010 | 0.804937 | 1.699868e-49 | -8.615850e-47 |
| Msa0375930 | Msa1329010 | 0.824181 | 9.277400e-54 | -8.615850e-47 |
| Msa0415210 | Msa1329010 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0416880 | Msa1329010 | 0.801097 | 1.057190e-48 | -8.615850e-47 |
| Msa0424570 | Msa1329010 | 0.825436 | 4.692063e-54 | -8.615850e-47 |
| Msa0425080 | Msa1329010 | 0.805243 | 1.466836e-49 | -8.615850e-47 |
| Msa0429100 | Msa1329010 | 0.820781 | 5.721373e-53 | -8.615850e-47 |
| Msa0481620 | Msa1329010 | 0.826729 | 2.312710e-54 | -8.615850e-47 |
| Msa0998940 | Msa1329010 | 0.836235 | 1.054170e-56 | -8.615850e-47 |
| Msa1029190 | Msa1329010 | 0.845645 | 3.569901e-59 | -8.615850e-47 |
| Msa1031760 | Msa1329010 | 0.802134 | 6.478858e-49 | -8.615850e-47 |
| Msa1038570 | Msa1329010 | 0.806796 | 6.912673e-50 | -8.615850e-47 |
| Msa1038580 | Msa1329010 | 0.809155 | 2.175433e-50 | -8.615850e-47 |
| Msa1044450 | Msa1329010 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa1065620 | Msa1329010 | 0.852190 | 5.431226e-61 | -8.615850e-47 |
| Msa1071460 | Msa1329010 | 0.803909 | 2.783643e-49 | -8.615850e-47 |
| Msa1072770 | Msa1329010 | 0.801685 | 8.014285e-49 | -8.615850e-47 |
| Msa1090020 | Msa1329010 | 0.835323 | 1.793784e-56 | -8.615850e-47 |
| Msa1104020 | Msa1329010 | 0.802258 | 6.110805e-49 | -8.615850e-47 |
| Msa0240460 | Msa1329010 | 0.807034 | 6.155077e-50 | -8.615850e-47 |
| Msa0263520 | Msa1329010 | 0.824837 | 6.499911e-54 | -8.615850e-47 |
| Msa0270640 | Msa1329010 | 0.824365 | 8.397279e-54 | -8.615850e-47 |
| Msa0278340 | Msa1329010 | 0.824196 | 9.202066e-54 | -8.615850e-47 |
| Msa0338670 | Msa1329010 | 0.822923 | 1.826894e-53 | -8.615850e-47 |
| Msa0343460 | Msa1329010 | 0.833683 | 4.633724e-56 | -8.615850e-47 |
| Msa1122480 | Msa1329010 | 0.804613 | 1.985892e-49 | -8.615850e-47 |
| Msa1129320 | Msa1329010 | 0.829996 | 3.764709e-55 | -8.615850e-47 |
| Msa1147600 | Msa1329010 | 0.852242 | 5.247639e-61 | -8.615850e-47 |
| Msa1147870 | Msa1329010 | 0.800219 | 1.597042e-48 | -8.615850e-47 |
| Msa1154750 | Msa1329010 | 0.823772 | 1.157122e-53 | -8.615850e-47 |
| Msa1154770 | Msa1329010 | 0.803621 | 3.193831e-49 | -8.615850e-47 |
| Msa1172070 | Msa1329010 | 0.813297 | 2.749043e-51 | -8.615850e-47 |
| Msa1172120 | Msa1329010 | 0.800049 | 1.729661e-48 | -8.615850e-47 |
| Msa1186010 | Msa1329010 | 0.810299 | 1.234877e-50 | -8.615850e-47 |
| Msa1203210 | Msa1329010 | 0.802480 | 5.498406e-49 | -8.615850e-47 |
| Msa1204110 | Msa1329010 | 0.821779 | 3.366996e-53 | -8.615850e-47 |
| Msa1204380 | Msa1329010 | 0.991188 | 2.431618e-186 | -8.615850e-47 |
| Msa1204390 | Msa1329010 | 0.811428 | 7.036689e-51 | -8.615850e-47 |
| Msa1215660 | Msa1329010 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa1218080 | Msa1329010 | 0.806225 | 9.121579e-50 | -8.615850e-47 |
| Msa0516000 | Msa1329010 | 0.820708 | 5.946723e-53 | -8.615850e-47 |
| Msa0540120 | Msa1329010 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0546370 | Msa1329010 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0555510 | Msa1329010 | 0.808615 | 2.838390e-50 | -8.615850e-47 |
| Msa0564000 | Msa1329010 | 0.810284 | 1.244112e-50 | -8.615850e-47 |
| Msa0576510 | Msa1329010 | 0.803270 | 3.775976e-49 | -8.615850e-47 |
| Msa0577960 | Msa1329010 | 0.817056 | 4.018424e-52 | -8.615850e-47 |
| Msa0848980 | Msa1329010 | 0.804904 | 1.727075e-49 | -8.615850e-47 |
| Msa0872800 | Msa1329010 | 0.809231 | 2.096158e-50 | -8.615850e-47 |
| Msa0899080 | Msa1329010 | 0.806696 | 7.255237e-50 | -8.615850e-47 |
| Msa0967250 | Msa1329010 | 0.847215 | 1.331052e-59 | -8.615850e-47 |
| Msa0967260 | Msa1329010 | 0.806609 | 7.570450e-50 | -8.615850e-47 |
| Msa0968970 | Msa1329010 | 0.809353 | 1.972850e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329010 | MtrunA17_Chr4g0053421 | 94.363 | 408 | 21 | 1 | 1 | 408 | 1 | 406 | 0.0 | 727 |
| Msa1329010 | MtrunA17_Chr8g0370051 | 97.561 | 82 | 1 | 1 | 295 | 376 | 21 | 101 | 1.08e-50 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329010 | AT5G67290.1 | 71.622 | 370 | 99 | 2 | 38 | 405 | 40 | 405 | 0.0 | 532 |
Find 185 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCAAGGTTTAGAGTTTC+TGG | 0.052251 | 8_4:-47060331 | Msa1329010:CDS |
| CGTAATAGCATTAGCTTCTT+TGG | 0.192294 | 8_4:+47060279 | None:intergenic |
| GGAAATTGTGATTGGGAAAT+TGG | 0.237880 | 8_4:-47060473 | Msa1329010:CDS |
| AATTATTATGAATTCAGTTT+AGG | 0.262062 | 8_4:+47061196 | None:intergenic |
| GGGCCCTTGGTCTAGTAAAT+TGG | 0.278810 | 8_4:-47060362 | Msa1329010:CDS |
| GTACTTCTCGAACTTGTTAC+AGG | 0.302335 | 8_4:+47058757 | None:intergenic |
| TGGGCTCTAAAACAATACTA+TGG | 0.307026 | 8_4:+47060299 | None:intergenic |
| CGTCAGCTACTTTGCCGTCT+TGG | 0.313573 | 8_4:-47060612 | Msa1329010:CDS |
| GTTGCTGAGCTTGTACTTGA+TGG | 0.314697 | 8_4:-47058991 | Msa1329010:CDS |
| ATTATTATGAATTCAGTTTA+GGG | 0.319491 | 8_4:+47061197 | None:intergenic |
| GTAATAGCATTAGCTTCTTT+GGG | 0.322290 | 8_4:+47060280 | None:intergenic |
| TGTAACGGAGGCACCTTTCT+TGG | 0.330519 | 8_4:+47060864 | None:intergenic |
| TTCCGCCAACTAGTATAATA+TGG | 0.334178 | 8_4:+47061107 | None:intergenic |
| GTTTGCGGTGGCGGAGTTAT+CGG | 0.334496 | 8_4:-47060910 | Msa1329010:CDS |
| TAGGAATCCACCAGCTTTAC+CGG | 0.334757 | 8_4:+47060807 | None:intergenic |
| GATGATGGTGTGCCGATTAT+AGG | 0.335684 | 8_4:-47059099 | Msa1329010:CDS |
| ACTTTGCCGTCTTGGATTGA+TGG | 0.340624 | 8_4:-47060604 | Msa1329010:CDS |
| CCGCAAACAACCACTTTCTT+CGG | 0.343837 | 8_4:+47060925 | None:intergenic |
| TTTAGTCCTGCTAGATTTGT+TGG | 0.345510 | 8_4:-47058940 | Msa1329010:CDS |
| TGGATTGATGGGCCGGCCCA+TGG | 0.348270 | 8_4:-47060592 | Msa1329010:CDS |
| GTTTAGAGTTTCTGGGCTTA+AGG | 0.354081 | 8_4:-47060323 | Msa1329010:CDS |
| GTAGGCCGAGGGTACACTTC+TGG | 0.354479 | 8_4:+47060202 | None:intergenic |
| GTGGATTCCTAGCTTTAGAT+TGG | 0.367942 | 8_4:-47060795 | Msa1329010:CDS |
| CCACCATTGTTGATCTTAAA+CGG | 0.372685 | 8_4:-47058963 | Msa1329010:CDS |
| CGCAAACAACCACTTTCTTC+GGG | 0.379429 | 8_4:+47060926 | None:intergenic |
| CTCACACACTAAGTCTGATT+TGG | 0.384313 | 8_4:+47058596 | None:intergenic |
| GTGGAAATGCGTATTCTGTT+TGG | 0.389369 | 8_4:+47060997 | None:intergenic |
| GCTCAAGGTTTAGAGTTTCT+GGG | 0.393881 | 8_4:-47060330 | Msa1329010:CDS |
| ACCATTGCTTGTGCCGCTTC+CGG | 0.396774 | 8_4:-47060826 | Msa1329010:CDS |
| CACTTTCTTCGGGTGATCCA+TGG | 0.400502 | 8_4:+47060936 | None:intergenic |
| TGCATAAAATATGCAAGGTC+CGG | 0.400962 | 8_4:+47058681 | None:intergenic |
| AGTAGAAAATGCTTAACATT+TGG | 0.402992 | 8_4:+47061327 | None:intergenic |
| AAGAGGGGTCCTTCGATTAG+AGG | 0.409881 | 8_4:+47060228 | None:intergenic |
| GCCCATGGGCCTAAAACAAT+TGG | 0.415627 | 8_4:-47060577 | Msa1329010:CDS |
| GCCGTCTTGGATTGATGGGC+CGG | 0.417639 | 8_4:-47060599 | Msa1329010:CDS |
| GGATTGATGGGCCGGCCCAT+GGG | 0.421402 | 8_4:-47060591 | Msa1329010:CDS |
| AAAGTGGTTGTTTGCGGTGG+CGG | 0.424230 | 8_4:-47060919 | Msa1329010:CDS |
| CCGATTATAGGAGAGATTCC+TGG | 0.427774 | 8_4:-47059087 | Msa1329010:CDS |
| TCGTTACCCCGTATCTCCTC+TGG | 0.428366 | 8_4:+47059222 | None:intergenic |
| GGGTGTTGTGGATGCGGATG+CGG | 0.429173 | 8_4:-47060398 | Msa1329010:CDS |
| CAATATCTCCAACGTGGATC+CGG | 0.431526 | 8_4:-47061350 | Msa1329010:five_prime_UTR |
| CCAGGAATCTCTCCTATAAT+CGG | 0.432508 | 8_4:+47059087 | None:intergenic |
| TTTCAAGAGTGGTTTAAAAT+CGG | 0.432897 | 8_4:+47061303 | None:intergenic |
| CTTTGCCGTCTTGGATTGAT+GGG | 0.436410 | 8_4:-47060603 | Msa1329010:CDS |
| ATTCTCAATGGTCCTGCCAC+TGG | 0.441042 | 8_4:-47059021 | Msa1329010:CDS |
| CTGATGATCCAGAGGAGATA+CGG | 0.442639 | 8_4:-47059230 | Msa1329010:CDS |
| TATGATGTATATATAACTGT+TGG | 0.447454 | 8_4:-47058842 | Msa1329010:three_prime_UTR |
| TTAGTCCTGCTAGATTTGTT+GGG | 0.447933 | 8_4:-47058939 | Msa1329010:CDS |
| GGTGGCCGGGGTTCGAACCC+CGG | 0.448110 | 8_4:-47058700 | Msa1329010:three_prime_UTR |
| CGTATCTCCTCTGGATCATC+AGG | 0.456119 | 8_4:+47059231 | None:intergenic |
| GCAACAGCAGCTCCAGTGGC+AGG | 0.457894 | 8_4:+47059009 | None:intergenic |
| GAAGTGTACCCTCGGCCTAC+AGG | 0.459094 | 8_4:-47060199 | Msa1329010:intron |
| TACGGTGTGGAAATTGTGAT+TGG | 0.463322 | 8_4:-47060481 | Msa1329010:CDS |
| AGACCGTATCAAGCCATCTC+GGG | 0.465287 | 8_4:-47059167 | Msa1329010:CDS |
| GTTGAATCGGTGGTTCTAGA+AGG | 0.466838 | 8_4:-47060424 | Msa1329010:CDS |
| TAGCGACGGGACATAGTTGC+TGG | 0.467406 | 8_4:-47059047 | Msa1329010:CDS |
| CCGAAGAAAGTGGTTGTTTG+CGG | 0.469061 | 8_4:-47060925 | Msa1329010:CDS |
| CTCTTAGTACATGGTGTGGC+AGG | 0.469999 | 8_4:-47058898 | Msa1329010:three_prime_UTR |
| CACGAGCGAGATGTTCCATT+GGG | 0.472582 | 8_4:+47060761 | None:intergenic |
| TCACTGTCTCAAGAGCTTAA+CGG | 0.483959 | 8_4:-47060718 | Msa1329010:CDS |
| TGTGCCGCTTCCGGTAAAGC+TGG | 0.485821 | 8_4:-47060817 | Msa1329010:CDS |
| AATTCAGTTTAGGGAAGCTA+TGG | 0.489428 | 8_4:+47061206 | None:intergenic |
| GCATAAAATATGCAAGGTCC+GGG | 0.491454 | 8_4:+47058682 | None:intergenic |
| AGATTGAACTGAATTGATAG+TGG | 0.491685 | 8_4:+47060978 | None:intergenic |
| GTTGTAATCAGAACACCAAC+TGG | 0.492757 | 8_4:-47061264 | Msa1329010:five_prime_UTR |
| TGAGCTTAGCTCAGTTGGTA+TGG | 0.493252 | 8_4:+47058654 | None:intergenic |
| CCTCGTGAGCTTAGCTCAGT+TGG | 0.495913 | 8_4:+47058649 | None:intergenic |
| GCTTACTTTCTCGCCAAGAA+AGG | 0.496186 | 8_4:-47060877 | Msa1329010:CDS |
| TCCACCAGCTTTACCGGAAG+CGG | 0.498128 | 8_4:+47060813 | None:intergenic |
| TCAAGCCATCTCGGGGAAGA+AGG | 0.503074 | 8_4:-47059159 | Msa1329010:CDS |
| GATTGGGAAATTGGAGAAGT+TGG | 0.503420 | 8_4:-47060464 | Msa1329010:CDS |
| TCACTCCTTCTTCCCCGAGA+TGG | 0.503688 | 8_4:+47059154 | None:intergenic |
| CAGGGGAGGTGTATGTGTGT+GGG | 0.503912 | 8_4:-47059275 | Msa1329010:CDS |
| AATTGGAGTTGTTGAGCTCA+AGG | 0.504811 | 8_4:-47060345 | Msa1329010:CDS |
| GCACGAGCGAGATGTTCCAT+TGG | 0.507781 | 8_4:+47060760 | None:intergenic |
| CGATTATAGGAGAGATTCCT+GGG | 0.510562 | 8_4:-47059086 | Msa1329010:CDS |
| GAGAAGTTGGTGGTGGAAGG+AGG | 0.512798 | 8_4:-47060451 | Msa1329010:CDS |
| AATGACCATATTATACTAGT+TGG | 0.513748 | 8_4:-47061112 | Msa1329010:five_prime_UTR |
| TGATGATCCAGAGGAGATAC+GGG | 0.515059 | 8_4:-47059229 | Msa1329010:CDS |
| TTGGAGAAGTTGGTGGTGGA+AGG | 0.521275 | 8_4:-47060454 | Msa1329010:CDS |
| ATTACAACTCAGATGGATAG+AGG | 0.521278 | 8_4:+47061279 | None:intergenic |
| AAGACCGTATCAAGCCATCT+CGG | 0.521544 | 8_4:-47059168 | Msa1329010:CDS |
| CTCAGCAACAGCAGCTCCAG+TGG | 0.525546 | 8_4:+47059005 | None:intergenic |
| TGTTGTGGATGCGGATGCGG+TGG | 0.525919 | 8_4:-47060395 | Msa1329010:CDS |
| TCAGGGGAGGTGTATGTGTG+TGG | 0.526444 | 8_4:-47059276 | Msa1329010:intron |
| GTGTCCGTGTAAACATTTGC+GGG | 0.527352 | 8_4:+47060527 | None:intergenic |
| ACCGGAAGCGGCACAAGCAA+TGG | 0.527375 | 8_4:+47060825 | None:intergenic |
| GAAAATGCTTAACATTTGGC+CGG | 0.528164 | 8_4:+47061331 | None:intergenic |
| GAGAACGCGGTGGAGAAGTA+CGG | 0.529700 | 8_4:-47060499 | Msa1329010:CDS |
| ACTTTCTTCGGGTGATCCAT+GGG | 0.531163 | 8_4:+47060937 | None:intergenic |
| TTCCCCGAGATGGCTTGATA+CGG | 0.532681 | 8_4:+47059164 | None:intergenic |
| ATCGGTGGTTCTAGAAGGTG+GGG | 0.534614 | 8_4:-47060419 | Msa1329010:CDS |
| GGAGAGATTCCTGGGGTGAA+AGG | 0.540724 | 8_4:-47059078 | Msa1329010:CDS |
| AATCGGTGGTTCTAGAAGGT+GGG | 0.541985 | 8_4:-47060420 | Msa1329010:CDS |
| CTAGCTTTAGATTGGTGTGA+CGG | 0.542058 | 8_4:-47060787 | Msa1329010:CDS |
| TGGGAAATTGGAGAAGTTGG+TGG | 0.544163 | 8_4:-47060461 | Msa1329010:CDS |
| TGTTCTGATTACAACTCAGA+TGG | 0.544527 | 8_4:+47061272 | None:intergenic |
| AAGGTCCGGGGTTCGAACCC+CGG | 0.544816 | 8_4:+47058695 | None:intergenic |
| GAAATTGGAGAAGTTGGTGG+TGG | 0.545179 | 8_4:-47060458 | Msa1329010:CDS |
| ATTACCAGCCACAAAATACA+AGG | 0.545802 | 8_4:-47061137 | Msa1329010:five_prime_UTR |
| TACTAAGAGTGACTAAGCCT+TGG | 0.546149 | 8_4:+47058912 | None:intergenic |
| GGAAGGAGGAAAAGTTGAAT+CGG | 0.546489 | 8_4:-47060437 | Msa1329010:CDS |
| GCCGCTTCCGGTAAAGCTGG+TGG | 0.546489 | 8_4:-47060814 | Msa1329010:CDS |
| TGGGATGTCAAAGGAGGAAG+AGG | 0.547600 | 8_4:-47059256 | Msa1329010:CDS |
| TGGATAGAGGATTTCAAGAG+TGG | 0.550064 | 8_4:+47061292 | None:intergenic |
| AAGAAAGTGGTTGTTTGCGG+TGG | 0.550857 | 8_4:-47060922 | Msa1329010:CDS |
| GACCATATTATACTAGTTGG+CGG | 0.551011 | 8_4:-47061109 | Msa1329010:five_prime_UTR |
| CGTCACACCAATCTAAAGCT+AGG | 0.552962 | 8_4:+47060788 | None:intergenic |
| AGTTGCTGGGGTATTCTCAA+TGG | 0.554810 | 8_4:-47059033 | Msa1329010:CDS |
| GATCGATAACCGTATGATTG+TGG | 0.557749 | 8_4:+47060694 | None:intergenic |
| AATCAATTGCGATGCTGAAG+AGG | 0.563061 | 8_4:-47059197 | Msa1329010:CDS |
| AAAGGTTGTTATGTAGCGAC+GGG | 0.565815 | 8_4:-47059060 | Msa1329010:CDS |
| GACAATGCATAAAATATGCA+AGG | 0.573559 | 8_4:+47058676 | None:intergenic |
| GTACGCCCAACAAATCTAGC+AGG | 0.574585 | 8_4:+47058934 | None:intergenic |
| GGGCTCTAAAACAATACTAT+GGG | 0.575399 | 8_4:+47060300 | None:intergenic |
| TAATACAGTTAAAGTCCAGT+TGG | 0.577336 | 8_4:+47061249 | None:intergenic |
| AGTGTCCGTGTAAACATTTG+CGG | 0.578489 | 8_4:+47060526 | None:intergenic |
| TTGGTGTGACGGAGGCCCAA+TGG | 0.578735 | 8_4:-47060776 | Msa1329010:CDS |
| TTGATCCAGAAGTGTACCCT+CGG | 0.583741 | 8_4:-47060207 | Msa1329010:CDS |
| CTATGGTTCTCGATCAAGAA+GGG | 0.586109 | 8_4:+47061223 | None:intergenic |
| CATGGATCACCCGAAGAAAG+TGG | 0.588077 | 8_4:-47060935 | Msa1329010:CDS |
| GAAATGCGTATTCTGTTTGG+AGG | 0.589634 | 8_4:+47061000 | None:intergenic |
| GCTTAGTCACTCTTAGTACA+TGG | 0.592068 | 8_4:-47058907 | Msa1329010:exon |
| ATCAATTGCGATGCTGAAGA+GGG | 0.593161 | 8_4:-47059196 | Msa1329010:CDS |
| GAAAGGTTGTTATGTAGCGA+CGG | 0.593501 | 8_4:-47059061 | Msa1329010:CDS |
| AACACATGAAACGACGGCGC+AGG | 0.595682 | 8_4:-47060554 | Msa1329010:CDS |
| ACAATCATACTTCATGAACT+AGG | 0.597320 | 8_4:-47058626 | Msa1329010:three_prime_UTR |
| AAATTCTCAATCATCGCCCA+TGG | 0.597393 | 8_4:-47060953 | Msa1329010:CDS |
| TAGATTTGTTGGGCGTACCA+AGG | 0.600268 | 8_4:-47058929 | Msa1329010:CDS |
| AGCGACGGGACATAGTTGCT+GGG | 0.602375 | 8_4:-47059046 | Msa1329010:CDS |
| ACGGTGTGGAAATTGTGATT+GGG | 0.603421 | 8_4:-47060480 | Msa1329010:CDS |
| ACATAACAACCTTTCACCCC+AGG | 0.606403 | 8_4:+47059069 | None:intergenic |
| GGGTACACTTCTGGATCAAG+AGG | 0.609222 | 8_4:+47060211 | None:intergenic |
| AGAGGTACCTGATGATCCAG+AGG | 0.611459 | 8_4:-47059238 | Msa1329010:CDS |
| GAATCGGTGGTTCTAGAAGG+TGG | 0.612809 | 8_4:-47060421 | Msa1329010:CDS |
| GGAAGCGGCACAAGCAATGG+TGG | 0.615498 | 8_4:+47060828 | None:intergenic |
| CCAACTGAGCTAAGCTCACG+AGG | 0.617839 | 8_4:-47058649 | Msa1329010:three_prime_UTR |
| AACTCCAATTTACTAGACCA+AGG | 0.620795 | 8_4:+47060358 | None:intergenic |
| GGATTTCTCAATGAGTGTAA+CGG | 0.624743 | 8_4:+47060849 | None:intergenic |
| GGGTCCTTCGATTAGAGGCA+CGG | 0.625148 | 8_4:+47060233 | None:intergenic |
| TTGATTCTTCAGTTACGGTG+AGG | 0.625754 | 8_4:+47060656 | None:intergenic |
| CGGGGAAGAAGGAGTGAAGG+TGG | 0.626528 | 8_4:-47059148 | Msa1329010:CDS |
| TGCACCCGCAAATGTTTACA+CGG | 0.626532 | 8_4:-47060531 | Msa1329010:CDS |
| ACATGCATACCTGTAGGCCG+AGG | 0.628125 | 8_4:+47060190 | None:intergenic |
| GACCGTATCAAGCCATCTCG+GGG | 0.629690 | 8_4:-47059166 | Msa1329010:CDS |
| CTTAACGGTCCACAATCATA+CGG | 0.634820 | 8_4:-47060703 | Msa1329010:CDS |
| GGTACACTTCTGGATCAAGA+GGG | 0.635457 | 8_4:+47060212 | None:intergenic |
| CCGTTTAAGATCAACAATGG+TGG | 0.636811 | 8_4:+47058963 | None:intergenic |
| TAATTGATACATGTATGCGA+AGG | 0.638270 | 8_4:-47061178 | Msa1329010:five_prime_UTR |
| AAACCGTTTAAGATCAACAA+TGG | 0.639170 | 8_4:+47058960 | None:intergenic |
| GCTTTAGATTGGTGTGACGG+AGG | 0.639280 | 8_4:-47060784 | Msa1329010:CDS |
| ACATTTGGCCGGATCCACGT+TGG | 0.639395 | 8_4:+47061342 | None:intergenic |
| GCCGGCCCATCAATCCAAGA+CGG | 0.640743 | 8_4:+47060598 | None:intergenic |
| GCTATGGTTCTCGATCAAGA+AGG | 0.643959 | 8_4:+47061222 | None:intergenic |
| TCTCGGGGAAGAAGGAGTGA+AGG | 0.650707 | 8_4:-47059151 | Msa1329010:CDS |
| TTTCTTGGCGAGAAAGTAAG+CGG | 0.651174 | 8_4:+47060879 | None:intergenic |
| GTATGTGTGTGGGATGTCAA+AGG | 0.654645 | 8_4:-47059265 | Msa1329010:CDS |
| CATAAAATATGCAAGGTCCG+GGG | 0.657923 | 8_4:+47058683 | None:intergenic |
| ACTCCAATTTACTAGACCAA+GGG | 0.659722 | 8_4:+47060359 | None:intergenic |
| CGCGGTGGAGAAGTACGGTG+TGG | 0.659962 | 8_4:-47060494 | Msa1329010:CDS |
| AGGAGGAAAAGTTGAATCGG+TGG | 0.662075 | 8_4:-47060434 | Msa1329010:CDS |
| GCTACCGTGCCTCTAATCGA+AGG | 0.663877 | 8_4:-47060237 | Msa1329010:CDS |
| TAAGCTCTTGAGACAGTGAA+CGG | 0.665750 | 8_4:+47060722 | None:intergenic |
| AATTGGAACACATGAAACGA+CGG | 0.667048 | 8_4:-47060560 | Msa1329010:CDS |
| CATGCATACCTGTAGGCCGA+GGG | 0.669805 | 8_4:+47060191 | None:intergenic |
| GCTAATCTGTATGAATCTAG+CGG | 0.674534 | 8_4:-47061031 | Msa1329010:CDS |
| AGACGGCAAAGTAGCTGACG+AGG | 0.677945 | 8_4:+47060615 | None:intergenic |
| CGGCAAAGTAGCTGACGAGG+AGG | 0.678972 | 8_4:+47060618 | None:intergenic |
| TGTGTGTGGGATGTCAAAGG+AGG | 0.686845 | 8_4:-47059262 | Msa1329010:CDS |
| GCGACGGGACATAGTTGCTG+GGG | 0.688705 | 8_4:-47059045 | Msa1329010:CDS |
| GGCACACCATCATCAGTACA+CGG | 0.689638 | 8_4:+47059108 | None:intergenic |
| GTCACTCTTAGTACATGGTG+TGG | 0.692627 | 8_4:-47058902 | Msa1329010:three_prime_UTR |
| TTACCAGCCACAAAATACAA+GGG | 0.693140 | 8_4:-47061136 | Msa1329010:five_prime_UTR |
| GACACTGATTGAGAACGCGG+TGG | 0.698796 | 8_4:-47060509 | Msa1329010:CDS |
| GCTCTTGAGACAGTGAACGG+TGG | 0.699538 | 8_4:+47060725 | None:intergenic |
| AGTTACGGTGAGGCTGAGAG+CGG | 0.699730 | 8_4:+47060666 | None:intergenic |
| TCGGTGGTTCTAGAAGGTGG+GGG | 0.701122 | 8_4:-47060418 | Msa1329010:CDS |
| TTTCTCAATGAGTGTAACGG+AGG | 0.702173 | 8_4:+47060852 | None:intergenic |
| GTACACTTCTGGATCAAGAG+GGG | 0.705861 | 8_4:+47060213 | None:intergenic |
| ACGGACACTGATTGAGAACG+CGG | 0.711223 | 8_4:-47060512 | Msa1329010:CDS |
| TGACGAGGAGGAAGAAACAG+TGG | 0.711480 | 8_4:+47060630 | None:intergenic |
| ATCAAACAATATCTCCAACG+TGG | 0.727124 | 8_4:-47061356 | Msa1329010:five_prime_UTR |
| AATCTGTATGAATCTAGCGG+CGG | 0.733075 | 8_4:-47061028 | Msa1329010:CDS |
| GATTATAGGAGAGATTCCTG+GGG | 0.781423 | 8_4:-47059085 | Msa1329010:CDS |
| GATGATCCAGAGGAGATACG+GGG | 0.782160 | 8_4:-47059228 | Msa1329010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTTTTTTTAT+AGG | + | chr8_4:47060277-47060296 | None:intergenic | 0.0% |
| !! | ATAAAAAAAAAAAAAAATTA+AGG | - | chr8_4:47060277-47060296 | Msa1329010:CDS | 0.0% |
| !! | TAAAAAAAAAAAAAAATTAA+GGG | - | chr8_4:47060278-47060297 | Msa1329010:CDS | 0.0% |
| !! | AATTTAAAAATCAAAGATAT+CGG | + | chr8_4:47059856-47059875 | None:intergenic | 10.0% |
| !!! | TATCTTTGATTTTTAAATTT+AGG | - | chr8_4:47059857-47059876 | Msa1329010:intron | 10.0% |
| !!! | TATTTTATTTTAAACAATGT+TGG | - | chr8_4:47059891-47059910 | Msa1329010:intron | 10.0% |
| !!! | AATTTAGACTTTTTTTTTTA+AGG | - | chr8_4:47060069-47060088 | Msa1329010:intron | 10.0% |
| !! | ATTATTATGAATTCAGTTTA+GGG | + | chr8_4:47058769-47058788 | None:intergenic | 15.0% |
| !! | AATTATTATGAATTCAGTTT+AGG | + | chr8_4:47058770-47058789 | None:intergenic | 15.0% |
| !! | AAAAAAATGAAAAACTAAAG+AGG | - | chr8_4:47058877-47058896 | Msa1329010:three_prime_UTR | 15.0% |
| !!! | TATAATTTACAAACGTATTT+TGG | - | chr8_4:47060119-47060138 | Msa1329010:intron | 15.0% |
| !! | TCACAGAAAACTATTTATTT+AGG | - | chr8_4:47059814-47059833 | Msa1329010:intron | 20.0% |
| !!! | TAGACTTTTTTTTTTAAGGA+AGG | - | chr8_4:47060073-47060092 | Msa1329010:intron | 20.0% |
| !! | GTCTCTTAAATTCATATTAT+GGG | + | chr8_4:47060146-47060165 | None:intergenic | 20.0% |
| !! | AGTCTCTTAAATTCATATTA+TGG | + | chr8_4:47060147-47060166 | None:intergenic | 20.0% |
| !!! | TTCTTTAAAAACACTTAGTT+TGG | + | chr8_4:47060305-47060324 | None:intergenic | 20.0% |
| !! | TTGTTGTATTTATATGCATT+TGG | - | chr8_4:47060393-47060412 | Msa1329010:CDS | 20.0% |
| !! | TAAACATCAGTATCTATTAA+TGG | + | chr8_4:47060659-47060678 | None:intergenic | 20.0% |
| !!! | TGATGTTTATTTTCTTATCA+GGG | - | chr8_4:47060670-47060689 | Msa1329010:CDS | 20.0% |
| !! | TATGATGTATATATAACTGT+TGG | - | chr8_4:47061121-47061140 | Msa1329010:five_prime_UTR | 20.0% |
| ! | AGTAGAAAATGCTTAACATT+TGG | + | chr8_4:47058639-47058658 | None:intergenic | 25.0% |
| !! | TTTCAAGAGTGGTTTAAAAT+CGG | + | chr8_4:47058663-47058682 | None:intergenic | 25.0% |
| ! | AATGACCATATTATACTAGT+TGG | - | chr8_4:47058851-47058870 | Msa1329010:three_prime_UTR | 25.0% |
| !!! | CAGATTAGCATTTTTAGAAT+TGG | + | chr8_4:47058921-47058940 | None:intergenic | 25.0% |
| ! | AATGTTGGTCACTTAAATTA+TGG | - | chr8_4:47059906-47059925 | Msa1329010:intron | 25.0% |
| ! | CAAATGTTAGTAATTACTTC+TGG | + | chr8_4:47060254-47060273 | None:intergenic | 25.0% |
| !!! | GTGTTTTTAAAGAAGCAAAA+TGG | - | chr8_4:47060311-47060330 | Msa1329010:CDS | 25.0% |
| ! | TTTAAAGAAGCAAAATGGAA+AGG | - | chr8_4:47060316-47060335 | Msa1329010:CDS | 25.0% |
| !! | CAAGAATTTCTAAGAACATT+TGG | + | chr8_4:47060376-47060395 | None:intergenic | 25.0% |
| ! | ATCCTTATTCATAGATTTCT+TGG | - | chr8_4:47060416-47060435 | Msa1329010:CDS | 25.0% |
| ! | AACCAAGAAATCTATGAATA+AGG | + | chr8_4:47060421-47060440 | None:intergenic | 25.0% |
| ! | AAATGGTTTGATCCAATTTA+TGG | + | chr8_4:47060444-47060463 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCGAGAAATGT+TGG | - | chr8_4:47060474-47060493 | Msa1329010:CDS | 25.0% |
| !!! | CTGATGTTTATTTTCTTATC+AGG | - | chr8_4:47060669-47060688 | Msa1329010:CDS | 25.0% |
| !!! | GATGTTTATTTTCTTATCAG+GGG | - | chr8_4:47060671-47060690 | Msa1329010:CDS | 25.0% |
| TAATACAGTTAAAGTCCAGT+TGG | + | chr8_4:47058717-47058736 | None:intergenic | 30.0% | |
| TAATTGATACATGTATGCGA+AGG | - | chr8_4:47058785-47058804 | Msa1329010:three_prime_UTR | 30.0% | |
| AGATTGAACTGAATTGATAG+TGG | + | chr8_4:47058988-47059007 | None:intergenic | 30.0% | |
| !! | GGTTTTTGATTCTTCAGTTA+CGG | + | chr8_4:47059315-47059334 | None:intergenic | 30.0% |
| ! | TCATGTGTTCCAATTGTTTT+AGG | + | chr8_4:47059398-47059417 | None:intergenic | 30.0% |
| ! | GTAATAGCATTAGCTTCTTT+GGG | + | chr8_4:47059686-47059705 | None:intergenic | 30.0% |
| CTGTGACTAAGATATTTGAT+TGG | + | chr8_4:47059800-47059819 | None:intergenic | 30.0% | |
| GTCACTTAAATTATGGACTT+TGG | - | chr8_4:47059913-47059932 | Msa1329010:intron | 30.0% | |
| !!! | ACTTGAGCTTTTTTGTCATT+TGG | - | chr8_4:47059936-47059955 | Msa1329010:intron | 30.0% |
| !!! | CTTGAGCTTTTTTGTCATTT+GGG | - | chr8_4:47059937-47059956 | Msa1329010:intron | 30.0% |
| GAGTTTAAAAGATGATGTCA+TGG | - | chr8_4:47060220-47060239 | Msa1329010:CDS | 30.0% | |
| AACACCACTTGAAAATGAAA+TGG | - | chr8_4:47060349-47060368 | Msa1329010:CDS | 30.0% | |
| GATTTCTTGGTTCCATAAAT+TGG | - | chr8_4:47060429-47060448 | Msa1329010:CDS | 30.0% | |
| ATTGGATCAAACCATTTCTT+TGG | - | chr8_4:47060447-47060466 | Msa1329010:CDS | 30.0% | |
| TTGAAAAGAGTCCAAAGAAA+TGG | + | chr8_4:47060461-47060480 | None:intergenic | 30.0% | |
| TTGATTGTGTGCTTACTTAT+AGG | - | chr8_4:47060497-47060516 | Msa1329010:CDS | 30.0% | |
| ! | AAACCGTTTAAGATCAACAA+TGG | + | chr8_4:47061006-47061025 | None:intergenic | 30.0% |
| !!! | ACCTTTTCCATTGTTTTTGT+TGG | - | chr8_4:47061239-47061258 | Msa1329010:five_prime_UTR | 30.0% |
| ACCAACAAAAACAATGGAAA+AGG | + | chr8_4:47061243-47061262 | None:intergenic | 30.0% | |
| !!! | TTTTCCATTGTTTTTGTTGG+TGG | - | chr8_4:47061242-47061261 | Msa1329010:five_prime_UTR | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr8_4:47061290-47061309 | None:intergenic | 30.0% | |
| ACAATCATACTTCATGAACT+AGG | - | chr8_4:47061337-47061356 | Msa1329010:five_prime_UTR | 30.0% | |
| GAAAATGCTTAACATTTGGC+CGG | + | chr8_4:47058635-47058654 | None:intergenic | 35.0% | |
| ATTACAACTCAGATGGATAG+AGG | + | chr8_4:47058687-47058706 | None:intergenic | 35.0% | |
| TGTTCTGATTACAACTCAGA+TGG | + | chr8_4:47058694-47058713 | None:intergenic | 35.0% | |
| AATTCAGTTTAGGGAAGCTA+TGG | + | chr8_4:47058760-47058779 | None:intergenic | 35.0% | |
| ! | TGTATTTTGTGGCTGGTAAT+TGG | + | chr8_4:47058826-47058845 | None:intergenic | 35.0% |
| ATTACCAGCCACAAAATACA+AGG | - | chr8_4:47058826-47058845 | Msa1329010:three_prime_UTR | 35.0% | |
| TTACCAGCCACAAAATACAA+GGG | - | chr8_4:47058827-47058846 | Msa1329010:three_prime_UTR | 35.0% | |
| ! | GTCATTTCCCTTGTATTTTG+TGG | + | chr8_4:47058837-47058856 | None:intergenic | 35.0% |
| GACCATATTATACTAGTTGG+CGG | - | chr8_4:47058854-47058873 | Msa1329010:three_prime_UTR | 35.0% | |
| TTCCGCCAACTAGTATAATA+TGG | + | chr8_4:47058859-47058878 | None:intergenic | 35.0% | |
| GCTAATCTGTATGAATCTAG+CGG | - | chr8_4:47058932-47058951 | Msa1329010:CDS | 35.0% | |
| GGATTTCTCAATGAGTGTAA+CGG | + | chr8_4:47059117-47059136 | None:intergenic | 35.0% | |
| AATTGGAACACATGAAACGA+CGG | - | chr8_4:47059403-47059422 | Msa1329010:intron | 35.0% | |
| GGAAATTGTGATTGGGAAAT+TGG | - | chr8_4:47059490-47059509 | Msa1329010:intron | 35.0% | |
| ACTCCAATTTACTAGACCAA+GGG | + | chr8_4:47059607-47059626 | None:intergenic | 35.0% | |
| AACTCCAATTTACTAGACCA+AGG | + | chr8_4:47059608-47059627 | None:intergenic | 35.0% | |
| !! | GGGCTCTAAAACAATACTAT+GGG | + | chr8_4:47059666-47059685 | None:intergenic | 35.0% |
| !! | TGGGCTCTAAAACAATACTA+TGG | + | chr8_4:47059667-47059686 | None:intergenic | 35.0% |
| ! | CGTAATAGCATTAGCTTCTT+TGG | + | chr8_4:47059687-47059706 | None:intergenic | 35.0% |
| ! | TAGCTAAGAAAAAGAGCATG+TGG | + | chr8_4:47059710-47059729 | None:intergenic | 35.0% |
| !!! | CATAGTGTGTAAGTTTTAGG+TGG | + | chr8_4:47059985-47060004 | None:intergenic | 35.0% |
| CACCTAAAACTTACACACTA+TGG | - | chr8_4:47059983-47060002 | Msa1329010:intron | 35.0% | |
| ! | GACCATAGTGTGTAAGTTTT+AGG | + | chr8_4:47059988-47060007 | None:intergenic | 35.0% |
| TCAACATTGTTAGTTGAGCT+AGG | - | chr8_4:47060029-47060048 | Msa1329010:intron | 35.0% | |
| TACCAATGAAGCTACCTATA+GGG | + | chr8_4:47060182-47060201 | None:intergenic | 35.0% | |
| TTACCAATGAAGCTACCTAT+AGG | + | chr8_4:47060183-47060202 | None:intergenic | 35.0% | |
| !! | TGGACCATTTCATTTTCAAG+TGG | + | chr8_4:47060356-47060375 | None:intergenic | 35.0% |
| ACCTTTGAATTACATGTTCC+AGG | - | chr8_4:47060552-47060571 | Msa1329010:CDS | 35.0% | |
| ACCTGGAACATGTAATTCAA+AGG | + | chr8_4:47060556-47060575 | None:intergenic | 35.0% | |
| !! | GATTTCACTTTTGTGCCAAT+GGG | + | chr8_4:47060580-47060599 | None:intergenic | 35.0% |
| !! | AGATTTCACTTTTGTGCCAA+TGG | + | chr8_4:47060581-47060600 | None:intergenic | 35.0% |
| !! | GTTTATTTTCTTATCAGGGG+AGG | - | chr8_4:47060674-47060693 | Msa1329010:CDS | 35.0% |
| CCACCATTGTTGATCTTAAA+CGG | - | chr8_4:47061000-47061019 | Msa1329010:CDS | 35.0% | |
| TTTAGTCCTGCTAGATTTGT+TGG | - | chr8_4:47061023-47061042 | Msa1329010:CDS | 35.0% | |
| ! | TTAGTCCTGCTAGATTTGTT+GGG | - | chr8_4:47061024-47061043 | Msa1329010:CDS | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | + | chr8_4:47061285-47061304 | None:intergenic | 35.0% | |
| TGGATAGAGGATTTCAAGAG+TGG | + | chr8_4:47058674-47058693 | None:intergenic | 40.0% | |
| GTTGTAATCAGAACACCAAC+TGG | - | chr8_4:47058699-47058718 | Msa1329010:three_prime_UTR | 40.0% | |
| CTATGGTTCTCGATCAAGAA+GGG | + | chr8_4:47058743-47058762 | None:intergenic | 40.0% | |
| ! | TTTCCCTTGTATTTTGTGGC+TGG | + | chr8_4:47058833-47058852 | None:intergenic | 40.0% |
| AATCTGTATGAATCTAGCGG+CGG | - | chr8_4:47058935-47058954 | Msa1329010:CDS | 40.0% | |
| GAAATGCGTATTCTGTTTGG+AGG | + | chr8_4:47058966-47058985 | None:intergenic | 40.0% | |
| GTGGAAATGCGTATTCTGTT+TGG | + | chr8_4:47058969-47058988 | None:intergenic | 40.0% | |
| AAATTCTCAATCATCGCCCA+TGG | - | chr8_4:47059010-47059029 | Msa1329010:CDS | 40.0% | |
| TTTCTTGGCGAGAAAGTAAG+CGG | + | chr8_4:47059087-47059106 | None:intergenic | 40.0% | |
| TTTCTCAATGAGTGTAACGG+AGG | + | chr8_4:47059114-47059133 | None:intergenic | 40.0% | |
| !! | GTGGATTCCTAGCTTTAGAT+TGG | - | chr8_4:47059168-47059187 | Msa1329010:CDS | 40.0% |
| !! | CTAGCTTTAGATTGGTGTGA+CGG | - | chr8_4:47059176-47059195 | Msa1329010:CDS | 40.0% |
| TAAGCTCTTGAGACAGTGAA+CGG | + | chr8_4:47059244-47059263 | None:intergenic | 40.0% | |
| TCACTGTCTCAAGAGCTTAA+CGG | - | chr8_4:47059245-47059264 | Msa1329010:CDS | 40.0% | |
| CTTAACGGTCCACAATCATA+CGG | - | chr8_4:47059260-47059279 | Msa1329010:CDS | 40.0% | |
| GATCGATAACCGTATGATTG+TGG | + | chr8_4:47059272-47059291 | None:intergenic | 40.0% | |
| TTGATTCTTCAGTTACGGTG+AGG | + | chr8_4:47059310-47059329 | None:intergenic | 40.0% | |
| !!! | TCCAATTGTTTTAGGCCCAT+GGG | + | chr8_4:47059390-47059409 | None:intergenic | 40.0% |
| !!! | TTCCAATTGTTTTAGGCCCA+TGG | + | chr8_4:47059391-47059410 | None:intergenic | 40.0% |
| AGTGTCCGTGTAAACATTTG+CGG | + | chr8_4:47059440-47059459 | None:intergenic | 40.0% | |
| TACGGTGTGGAAATTGTGAT+TGG | - | chr8_4:47059482-47059501 | Msa1329010:intron | 40.0% | |
| ACGGTGTGGAAATTGTGATT+GGG | - | chr8_4:47059483-47059502 | Msa1329010:intron | 40.0% | |
| GATTGGGAAATTGGAGAAGT+TGG | - | chr8_4:47059499-47059518 | Msa1329010:intron | 40.0% | |
| GGAAGGAGGAAAAGTTGAAT+CGG | - | chr8_4:47059526-47059545 | Msa1329010:intron | 40.0% | |
| AATTGGAGTTGTTGAGCTCA+AGG | - | chr8_4:47059618-47059637 | Msa1329010:intron | 40.0% | |
| ! | AGCTCAAGGTTTAGAGTTTC+TGG | - | chr8_4:47059632-47059651 | Msa1329010:intron | 40.0% |
| ! | GCTCAAGGTTTAGAGTTTCT+GGG | - | chr8_4:47059633-47059652 | Msa1329010:intron | 40.0% |
| ! | GTTTAGAGTTTCTGGGCTTA+AGG | - | chr8_4:47059640-47059659 | Msa1329010:intron | 40.0% |
| ATTGGTACATGCATACCTGT+AGG | + | chr8_4:47059782-47059801 | None:intergenic | 40.0% | |
| ACCAATGAAGCTACCTATAG+GGG | + | chr8_4:47060181-47060200 | None:intergenic | 40.0% | |
| AATCAATTGCGATGCTGAAG+AGG | - | chr8_4:47060766-47060785 | Msa1329010:CDS | 40.0% | |
| ATCAATTGCGATGCTGAAGA+GGG | - | chr8_4:47060767-47060786 | Msa1329010:CDS | 40.0% | |
| !! | TTTTTGCCGTGTACTGATGA+TGG | - | chr8_4:47060849-47060868 | Msa1329010:CDS | 40.0% |
| CCAGGAATCTCTCCTATAAT+CGG | + | chr8_4:47060879-47060898 | None:intergenic | 40.0% | |
| CGATTATAGGAGAGATTCCT+GGG | - | chr8_4:47060877-47060896 | Msa1329010:CDS | 40.0% | |
| GATTATAGGAGAGATTCCTG+GGG | - | chr8_4:47060878-47060897 | Msa1329010:CDS | 40.0% | |
| GAAAGGTTGTTATGTAGCGA+CGG | - | chr8_4:47060902-47060921 | Msa1329010:CDS | 40.0% | |
| AAAGGTTGTTATGTAGCGAC+GGG | - | chr8_4:47060903-47060922 | Msa1329010:CDS | 40.0% | |
| ! | CCGTTTAAGATCAACAATGG+TGG | + | chr8_4:47061003-47061022 | None:intergenic | 40.0% |
| TACTAAGAGTGACTAAGCCT+TGG | + | chr8_4:47061054-47061073 | None:intergenic | 40.0% | |
| GCTTAGTCACTCTTAGTACA+TGG | - | chr8_4:47061056-47061075 | Msa1329010:five_prime_UTR | 40.0% | |
| !! | GTACTTCTCGAACTTGTTAC+AGG | + | chr8_4:47061209-47061228 | None:intergenic | 40.0% |
| !!! | TCCATTGTTTTTGTTGGTGG+TGG | - | chr8_4:47061245-47061264 | Msa1329010:five_prime_UTR | 40.0% |
| CATAAAATATGCAAGGTCCG+GGG | + | chr8_4:47061283-47061302 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr8_4:47061284-47061303 | None:intergenic | 40.0% | |
| CAATATCTCCAACGTGGATC+CGG | - | chr8_4:47058613-47058632 | Msa1329010:three_prime_UTR | 45.0% | |
| GCTATGGTTCTCGATCAAGA+AGG | + | chr8_4:47058744-47058763 | None:intergenic | 45.0% | |
| ACTTTCTTCGGGTGATCCAT+GGG | + | chr8_4:47059029-47059048 | None:intergenic | 45.0% | |
| CGCAAACAACCACTTTCTTC+GGG | + | chr8_4:47059040-47059059 | None:intergenic | 45.0% | |
| CCGCAAACAACCACTTTCTT+CGG | + | chr8_4:47059041-47059060 | None:intergenic | 45.0% | |
| CCGAAGAAAGTGGTTGTTTG+CGG | - | chr8_4:47059038-47059057 | Msa1329010:CDS | 45.0% | |
| AAGAAAGTGGTTGTTTGCGG+TGG | - | chr8_4:47059041-47059060 | Msa1329010:CDS | 45.0% | |
| GCTTACTTTCTCGCCAAGAA+AGG | - | chr8_4:47059086-47059105 | Msa1329010:CDS | 45.0% | |
| TAGGAATCCACCAGCTTTAC+CGG | + | chr8_4:47059159-47059178 | None:intergenic | 45.0% | |
| ! | CGTCACACCAATCTAAAGCT+AGG | + | chr8_4:47059178-47059197 | None:intergenic | 45.0% |
| ACTTTGCCGTCTTGGATTGA+TGG | - | chr8_4:47059359-47059378 | Msa1329010:intron | 45.0% | |
| CTTTGCCGTCTTGGATTGAT+GGG | - | chr8_4:47059360-47059379 | Msa1329010:intron | 45.0% | |
| TGCACCCGCAAATGTTTACA+CGG | - | chr8_4:47059432-47059451 | Msa1329010:intron | 45.0% | |
| GTGTCCGTGTAAACATTTGC+GGG | + | chr8_4:47059439-47059458 | None:intergenic | 45.0% | |
| TGGGAAATTGGAGAAGTTGG+TGG | - | chr8_4:47059502-47059521 | Msa1329010:intron | 45.0% | |
| !! | GAAATTGGAGAAGTTGGTGG+TGG | - | chr8_4:47059505-47059524 | Msa1329010:intron | 45.0% |
| AGGAGGAAAAGTTGAATCGG+TGG | - | chr8_4:47059529-47059548 | Msa1329010:intron | 45.0% | |
| !! | GTTGAATCGGTGGTTCTAGA+AGG | - | chr8_4:47059539-47059558 | Msa1329010:intron | 45.0% |
| !! | AATCGGTGGTTCTAGAAGGT+GGG | - | chr8_4:47059543-47059562 | Msa1329010:intron | 45.0% |
| !!! | GATGCGGTGGTTTTAGCATT+GGG | - | chr8_4:47059581-47059600 | Msa1329010:intron | 45.0% |
| GTACACTTCTGGATCAAGAG+GGG | + | chr8_4:47059753-47059772 | None:intergenic | 45.0% | |
| GGTACACTTCTGGATCAAGA+GGG | + | chr8_4:47059754-47059773 | None:intergenic | 45.0% | |
| ! | TTGATCCAGAAGTGTACCCT+CGG | - | chr8_4:47059756-47059775 | Msa1329010:intron | 45.0% |
| GGTTATCACCACTTCGTCTA+CGG | + | chr8_4:47059964-47059983 | None:intergenic | 45.0% | |
| CTCAAATGAAACCCCCCTAT+AGG | - | chr8_4:47060165-47060184 | Msa1329010:intron | 45.0% | |
| CAATGAAGCTACCTATAGGG+GGG | + | chr8_4:47060179-47060198 | None:intergenic | 45.0% | |
| CCAATGAAGCTACCTATAGG+GGG | + | chr8_4:47060180-47060199 | None:intergenic | 45.0% | |
| TACATGTTCCAGGTTCCCAT+TGG | - | chr8_4:47060562-47060581 | Msa1329010:CDS | 45.0% | |
| GTATGTGTGTGGGATGTCAA+AGG | - | chr8_4:47060698-47060717 | Msa1329010:CDS | 45.0% | |
| CTGATGATCCAGAGGAGATA+CGG | - | chr8_4:47060733-47060752 | Msa1329010:CDS | 45.0% | |
| TGATGATCCAGAGGAGATAC+GGG | - | chr8_4:47060734-47060753 | Msa1329010:CDS | 45.0% | |
| AAGACCGTATCAAGCCATCT+CGG | - | chr8_4:47060795-47060814 | Msa1329010:CDS | 45.0% | |
| !! | GATGATGGTGTGCCGATTAT+AGG | - | chr8_4:47060864-47060883 | Msa1329010:CDS | 45.0% |
| CCGATTATAGGAGAGATTCC+TGG | - | chr8_4:47060876-47060895 | Msa1329010:CDS | 45.0% | |
| ACATAACAACCTTTCACCCC+AGG | + | chr8_4:47060897-47060916 | None:intergenic | 45.0% | |
| ! | AGTTGCTGGGGTATTCTCAA+TGG | - | chr8_4:47060930-47060949 | Msa1329010:CDS | 45.0% |
| GTTGCTGAGCTTGTACTTGA+TGG | - | chr8_4:47060972-47060991 | Msa1329010:CDS | 45.0% | |
| !! | TAGATTTGTTGGGCGTACCA+AGG | - | chr8_4:47061034-47061053 | Msa1329010:CDS | 45.0% |
| GTCACTCTTAGTACATGGTG+TGG | - | chr8_4:47061061-47061080 | Msa1329010:five_prime_UTR | 45.0% | |
| GCCACCACCAACAAAAACAA+TGG | + | chr8_4:47061249-47061268 | None:intergenic | 45.0% | |
| !!! | TTGTTTTTGTTGGTGGTGGC+CGG | - | chr8_4:47061249-47061268 | Msa1329010:five_prime_UTR | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr8_4:47061312-47061331 | None:intergenic | 45.0% |
| !! | TTAAAATAAAATAAAATTGA+AGG | + | chr8_4:47059884-47059903 | None:intergenic | 5.0% |
| !! | TTAAATTATAAAAATATTCT+TGG | + | chr8_4:47061177-47061196 | None:intergenic | 5.0% |
| CACTTTCTTCGGGTGATCCA+TGG | + | chr8_4:47059030-47059049 | None:intergenic | 50.0% | |
| CATGGATCACCCGAAGAAAG+TGG | - | chr8_4:47059028-47059047 | Msa1329010:CDS | 50.0% | |
| AAAGTGGTTGTTTGCGGTGG+CGG | - | chr8_4:47059044-47059063 | Msa1329010:CDS | 50.0% | |
| !! | TGTAACGGAGGCACCTTTCT+TGG | + | chr8_4:47059102-47059121 | None:intergenic | 50.0% |
| ! | GCTTTAGATTGGTGTGACGG+AGG | - | chr8_4:47059179-47059198 | Msa1329010:CDS | 50.0% |
| CACGAGCGAGATGTTCCATT+GGG | + | chr8_4:47059205-47059224 | None:intergenic | 50.0% | |
| TGACGAGGAGGAAGAAACAG+TGG | + | chr8_4:47059336-47059355 | None:intergenic | 50.0% | |
| !!! | ATTGTTTTAGGCCCATGGGC+CGG | + | chr8_4:47059386-47059405 | None:intergenic | 50.0% |
| GCCCATGGGCCTAAAACAAT+TGG | - | chr8_4:47059386-47059405 | Msa1329010:intron | 50.0% | |
| ! | ACGGACACTGATTGAGAACG+CGG | - | chr8_4:47059451-47059470 | Msa1329010:intron | 50.0% |
| !! | TTGGAGAAGTTGGTGGTGGA+AGG | - | chr8_4:47059509-47059528 | Msa1329010:intron | 50.0% |
| !! | GAATCGGTGGTTCTAGAAGG+TGG | - | chr8_4:47059542-47059561 | Msa1329010:intron | 50.0% |
| !! | ATCGGTGGTTCTAGAAGGTG+GGG | - | chr8_4:47059544-47059563 | Msa1329010:intron | 50.0% |
| !!! | GGATGCGGTGGTTTTAGCAT+TGG | - | chr8_4:47059580-47059599 | Msa1329010:intron | 50.0% |
| !!! | TGGTTTTAGCATTGGGCCCT+TGG | - | chr8_4:47059588-47059607 | Msa1329010:intron | 50.0% |
| GGGCCCTTGGTCTAGTAAAT+TGG | - | chr8_4:47059601-47059620 | Msa1329010:intron | 50.0% | |
| AAGAGGGGTCCTTCGATTAG+AGG | + | chr8_4:47059738-47059757 | None:intergenic | 50.0% | |
| GGGTACACTTCTGGATCAAG+AGG | + | chr8_4:47059755-47059774 | None:intergenic | 50.0% | |
| ATTTGGGTCCGTAGACGAAG+TGG | - | chr8_4:47059953-47059972 | Msa1329010:intron | 50.0% | |
| CCCCCTATAGGTAGCTTCAT+TGG | - | chr8_4:47060177-47060196 | Msa1329010:intron | 50.0% | |
| ! | CTTTTGTGCCAATGGGAACC+TGG | + | chr8_4:47060573-47060592 | None:intergenic | 50.0% |
| TGTGTGTGGGATGTCAAAGG+AGG | - | chr8_4:47060701-47060720 | Msa1329010:CDS | 50.0% | |
| TGGGATGTCAAAGGAGGAAG+AGG | - | chr8_4:47060707-47060726 | Msa1329010:CDS | 50.0% | |
| !! | AGAGGTACCTGATGATCCAG+AGG | - | chr8_4:47060725-47060744 | Msa1329010:CDS | 50.0% |
| CGTATCTCCTCTGGATCATC+AGG | + | chr8_4:47060735-47060754 | None:intergenic | 50.0% | |
| GATGATCCAGAGGAGATACG+GGG | - | chr8_4:47060735-47060754 | Msa1329010:CDS | 50.0% | |
| AGACCGTATCAAGCCATCTC+GGG | - | chr8_4:47060796-47060815 | Msa1329010:CDS | 50.0% | |
| TTCCCCGAGATGGCTTGATA+CGG | + | chr8_4:47060802-47060821 | None:intergenic | 50.0% | |
| GGCACACCATCATCAGTACA+CGG | + | chr8_4:47060858-47060877 | None:intergenic | 50.0% | |
| ATTCTCAATGGTCCTGCCAC+TGG | - | chr8_4:47060942-47060961 | Msa1329010:CDS | 50.0% | |
| GTACGCCCAACAAATCTAGC+AGG | + | chr8_4:47061032-47061051 | None:intergenic | 50.0% | |
| CTCTTAGTACATGGTGTGGC+AGG | - | chr8_4:47061065-47061084 | Msa1329010:five_prime_UTR | 50.0% | |
| !!! | TGTTTTTGTTGGTGGTGGCC+GGG | - | chr8_4:47061250-47061269 | Msa1329010:five_prime_UTR | 50.0% |
| ACATTTGGCCGGATCCACGT+TGG | + | chr8_4:47058624-47058643 | None:intergenic | 55.0% | |
| !! | GTTTGCGGTGGCGGAGTTAT+CGG | - | chr8_4:47059053-47059072 | Msa1329010:CDS | 55.0% |
| !! | ACCATTGCTTGTGCCGCTTC+CGG | - | chr8_4:47059137-47059156 | Msa1329010:CDS | 55.0% |
| TCCACCAGCTTTACCGGAAG+CGG | + | chr8_4:47059153-47059172 | None:intergenic | 55.0% | |
| GCACGAGCGAGATGTTCCAT+TGG | + | chr8_4:47059206-47059225 | None:intergenic | 55.0% | |
| GCTCTTGAGACAGTGAACGG+TGG | + | chr8_4:47059241-47059260 | None:intergenic | 55.0% | |
| AGTTACGGTGAGGCTGAGAG+CGG | + | chr8_4:47059300-47059319 | None:intergenic | 55.0% | |
| AGACGGCAAAGTAGCTGACG+AGG | + | chr8_4:47059351-47059370 | None:intergenic | 55.0% | |
| ! | CGTCAGCTACTTTGCCGTCT+TGG | - | chr8_4:47059351-47059370 | Msa1329010:intron | 55.0% |
| AACACATGAAACGACGGCGC+AGG | - | chr8_4:47059409-47059428 | Msa1329010:intron | 55.0% | |
| ! | GACACTGATTGAGAACGCGG+TGG | - | chr8_4:47059454-47059473 | Msa1329010:intron | 55.0% |
| GAGAACGCGGTGGAGAAGTA+CGG | - | chr8_4:47059464-47059483 | Msa1329010:intron | 55.0% | |
| !! | GAGAAGTTGGTGGTGGAAGG+AGG | - | chr8_4:47059512-47059531 | Msa1329010:intron | 55.0% |
| !! | TCGGTGGTTCTAGAAGGTGG+GGG | - | chr8_4:47059545-47059564 | Msa1329010:intron | 55.0% |
| !! | TCTAGAAGGTGGGGGTGTTG+TGG | - | chr8_4:47059553-47059572 | Msa1329010:intron | 55.0% |
| GCTACCGTGCCTCTAATCGA+AGG | - | chr8_4:47059726-47059745 | Msa1329010:intron | 55.0% | |
| GGGTCCTTCGATTAGAGGCA+CGG | + | chr8_4:47059733-47059752 | None:intergenic | 55.0% | |
| CATGCATACCTGTAGGCCGA+GGG | + | chr8_4:47059775-47059794 | None:intergenic | 55.0% | |
| ACATGCATACCTGTAGGCCG+AGG | + | chr8_4:47059776-47059795 | None:intergenic | 55.0% | |
| ! | TCAGGGGAGGTGTATGTGTG+TGG | - | chr8_4:47060687-47060706 | Msa1329010:CDS | 55.0% |
| ! | CAGGGGAGGTGTATGTGTGT+GGG | - | chr8_4:47060688-47060707 | Msa1329010:CDS | 55.0% |
| TCGTTACCCCGTATCTCCTC+TGG | + | chr8_4:47060744-47060763 | None:intergenic | 55.0% | |
| GACCGTATCAAGCCATCTCG+GGG | - | chr8_4:47060797-47060816 | Msa1329010:CDS | 55.0% | |
| TCAAGCCATCTCGGGGAAGA+AGG | - | chr8_4:47060804-47060823 | Msa1329010:CDS | 55.0% | |
| TCACTCCTTCTTCCCCGAGA+TGG | + | chr8_4:47060812-47060831 | None:intergenic | 55.0% | |
| TCTCGGGGAAGAAGGAGTGA+AGG | - | chr8_4:47060812-47060831 | Msa1329010:CDS | 55.0% | |
| GGAGAGATTCCTGGGGTGAA+AGG | - | chr8_4:47060885-47060904 | Msa1329010:CDS | 55.0% | |
| TAGCGACGGGACATAGTTGC+TGG | - | chr8_4:47060916-47060935 | Msa1329010:CDS | 55.0% | |
| AGCGACGGGACATAGTTGCT+GGG | - | chr8_4:47060917-47060936 | Msa1329010:CDS | 55.0% | |
| !!! | GTTTTTGTTGGTGGTGGCCG+GGG | - | chr8_4:47061251-47061270 | Msa1329010:five_prime_UTR | 55.0% |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_4:47061317-47061336 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_4:47061314-47061333 | Msa1329010:five_prime_UTR | 55.0% | |
| GGAAGCGGCACAAGCAATGG+TGG | + | chr8_4:47059138-47059157 | None:intergenic | 60.0% | |
| ACCGGAAGCGGCACAAGCAA+TGG | + | chr8_4:47059141-47059160 | None:intergenic | 60.0% | |
| !! | TGTGCCGCTTCCGGTAAAGC+TGG | - | chr8_4:47059146-47059165 | Msa1329010:CDS | 60.0% |
| ! | TTGGTGTGACGGAGGCCCAA+TGG | - | chr8_4:47059187-47059206 | Msa1329010:CDS | 60.0% |
| CGGCAAAGTAGCTGACGAGG+AGG | + | chr8_4:47059348-47059367 | None:intergenic | 60.0% | |
| ! | GCCGTCTTGGATTGATGGGC+CGG | - | chr8_4:47059364-47059383 | Msa1329010:intron | 60.0% |
| GCCGGCCCATCAATCCAAGA+CGG | + | chr8_4:47059368-47059387 | None:intergenic | 60.0% | |
| !! | AGGTGGGGGTGTTGTGGATG+CGG | - | chr8_4:47059559-47059578 | Msa1329010:intron | 60.0% |
| ! | GGGTGTTGTGGATGCGGATG+CGG | - | chr8_4:47059565-47059584 | Msa1329010:intron | 60.0% |
| TGTTGTGGATGCGGATGCGG+TGG | - | chr8_4:47059568-47059587 | Msa1329010:intron | 60.0% | |
| ! | GTAGGCCGAGGGTACACTTC+TGG | + | chr8_4:47059764-47059783 | None:intergenic | 60.0% |
| GAAGTGTACCCTCGGCCTAC+AGG | - | chr8_4:47059764-47059783 | Msa1329010:intron | 60.0% | |
| CGGGGAAGAAGGAGTGAAGG+TGG | - | chr8_4:47060815-47060834 | Msa1329010:CDS | 60.0% | |
| GCGACGGGACATAGTTGCTG+GGG | - | chr8_4:47060918-47060937 | Msa1329010:CDS | 60.0% | |
| CTCAGCAACAGCAGCTCCAG+TGG | + | chr8_4:47060961-47060980 | None:intergenic | 60.0% | |
| GCCGCTTCCGGTAAAGCTGG+TGG | - | chr8_4:47059149-47059168 | Msa1329010:CDS | 65.0% | |
| ! | TGGATTGATGGGCCGGCCCA+TGG | - | chr8_4:47059371-47059390 | Msa1329010:intron | 65.0% |
| ! | GGATTGATGGGCCGGCCCAT+GGG | - | chr8_4:47059372-47059391 | Msa1329010:intron | 65.0% |
| ! | CGCGGTGGAGAAGTACGGTG+TGG | - | chr8_4:47059469-47059488 | Msa1329010:intron | 65.0% |
| GCAACAGCAGCTCCAGTGGC+AGG | + | chr8_4:47060957-47060976 | None:intergenic | 65.0% | |
| AAGGTCCGGGGTTCGAACCC+CGG | + | chr8_4:47061271-47061290 | None:intergenic | 65.0% | |
| GGTGGCCGGGGTTCGAACCC+CGG | - | chr8_4:47061263-47061282 | Msa1329010:five_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 47058610 | 47061375 | 47058610 | ID=Msa1329010;Name=Msa1329010 |
| chr8_4 | mRNA | 47058610 | 47061375 | 47058610 | ID=Msa1329010-mRNA-1;Parent=Msa1329010;Name=Msa1329010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=320|1|1|1|1|1|2|314|408 |
| chr8_4 | exon | 47058610 | 47059294 | 47058610 | ID=Msa1329010-mRNA-1:exon:13512;Parent=Msa1329010-mRNA-1 |
| chr8_4 | exon | 47060200 | 47061375 | 47060200 | ID=Msa1329010-mRNA-1:exon:13511;Parent=Msa1329010-mRNA-1 |
| chr8_4 | five_prime_UTR | 47061056 | 47061375 | 47061056 | ID=Msa1329010-mRNA-1:five_prime_utr;Parent=Msa1329010-mRNA-1 |
| chr8_4 | CDS | 47060200 | 47061055 | 47060200 | ID=Msa1329010-mRNA-1:cds;Parent=Msa1329010-mRNA-1 |
| chr8_4 | CDS | 47058924 | 47059294 | 47058924 | ID=Msa1329010-mRNA-1:cds;Parent=Msa1329010-mRNA-1 |
| chr8_4 | three_prime_UTR | 47058610 | 47058923 | 47058610 | ID=Msa1329010-mRNA-1:three_prime_utr;Parent=Msa1329010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
