Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639640 | XP_003605744.1 | 99.701 | 335 | 1 | 0 | 1 | 335 | 35 | 369 | 0.0 | 698 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639640 | sp|Q6WUC2|7OMT_PAPSO | 50.000 | 340 | 161 | 5 | 1 | 334 | 18 | 354 | 1.82e-120 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639640 | G7JTH4 | 99.701 | 335 | 1 | 0 | 1 | 335 | 35 | 369 | 0.0 | 698 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000310 | Msa0639640 | 0.803725 | 3.039514e-49 | -8.615850e-47 |
| Msa0008330 | Msa0639640 | 0.832404 | 9.637761e-56 | -8.615850e-47 |
| Msa0014970 | Msa0639640 | 0.814601 | 1.417571e-51 | -8.615850e-47 |
| Msa0021980 | Msa0639640 | 0.822526 | 2.259569e-53 | -8.615850e-47 |
| Msa0024490 | Msa0639640 | 0.813420 | 2.583626e-51 | -8.615850e-47 |
| Msa0039780 | Msa0639640 | 0.815691 | 8.119672e-52 | -8.615850e-47 |
| Msa0042130 | Msa0639640 | 0.828218 | 1.015898e-54 | -8.615850e-47 |
| Msa0046860 | Msa0639640 | 0.804443 | 2.154996e-49 | -8.615850e-47 |
| Msa0057270 | Msa0639640 | 0.850422 | 1.715312e-60 | -8.615850e-47 |
| Msa0063850 | Msa0639640 | 0.839988 | 1.139528e-57 | -8.615850e-47 |
| Msa0078080 | Msa0639640 | 0.800342 | 1.507682e-48 | -8.615850e-47 |
| Msa0087370 | Msa0639640 | 0.815667 | 8.219970e-52 | -8.615850e-47 |
| Msa0090350 | Msa0639640 | 0.803304 | 3.715523e-49 | -8.615850e-47 |
| Msa0108500 | Msa0639640 | 0.809192 | 2.136962e-50 | -8.615850e-47 |
| Msa0119630 | Msa0639640 | 0.800098 | 1.690322e-48 | -8.615850e-47 |
| Msa0120310 | Msa0639640 | 0.830881 | 2.287709e-55 | -8.615850e-47 |
| Msa0607620 | Msa0639640 | 0.820613 | 6.252940e-53 | -8.615850e-47 |
| Msa0608940 | Msa0639640 | 0.829856 | 4.072564e-55 | -8.615850e-47 |
| Msa0617470 | Msa0639640 | 0.805464 | 1.318050e-49 | -8.615850e-47 |
| Msa0619480 | Msa0639640 | 0.823106 | 1.656052e-53 | -8.615850e-47 |
| Msa0626890 | Msa0639640 | 0.802716 | 4.915999e-49 | -8.615850e-47 |
| Msa0626900 | Msa0639640 | 0.809384 | 1.943397e-50 | -8.615850e-47 |
| Msa0634260 | Msa0639640 | 0.806890 | 6.602930e-50 | -8.615850e-47 |
| Msa0635070 | Msa0639640 | 0.823546 | 1.307145e-53 | -8.615850e-47 |
| Msa0636840 | Msa0639640 | 0.819789 | 9.655699e-53 | -8.615850e-47 |
| Msa0639630 | Msa0639640 | 0.915754 | 4.042619e-85 | -8.615850e-47 |
| Msa0639640 | Msa0640780 | 0.813638 | 2.312470e-51 | -8.615850e-47 |
| Msa0639640 | Msa0642150 | 0.820458 | 6.788033e-53 | -8.615850e-47 |
| Msa0639640 | Msa0647860 | 0.814860 | 1.242492e-51 | -8.615850e-47 |
| Msa0639640 | Msa0648200 | 0.802299 | 5.993802e-49 | -8.615850e-47 |
| Msa0639640 | Msa0649530 | 0.835476 | 1.641402e-56 | -8.615850e-47 |
| Msa0639640 | Msa0657300 | 0.801506 | 8.720203e-49 | -8.615850e-47 |
| Msa0639640 | Msa0658920 | 0.877748 | 4.898100e-69 | -8.615850e-47 |
| Msa0639640 | Msa0659640 | 0.815370 | 9.569790e-52 | -8.615850e-47 |
| Msa0639640 | Msa0663630 | 0.808560 | 2.916797e-50 | -8.615850e-47 |
| Msa0639640 | Msa0663650 | 0.805625 | 1.219307e-49 | -8.615850e-47 |
| Msa0639640 | Msa0665010 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0639640 | Msa0675250 | 0.839012 | 2.043829e-57 | -8.615850e-47 |
| Msa0639640 | Msa0677460 | 0.900447 | 7.256543e-78 | -8.615850e-47 |
| Msa0639640 | Msa0677470 | 0.800976 | 1.119407e-48 | -8.615850e-47 |
| Msa0639640 | Msa0687320 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0639640 | Msa0690580 | 0.817244 | 3.646417e-52 | -8.615850e-47 |
| Msa0639640 | Msa0691140 | 0.800605 | 1.332638e-48 | -8.615850e-47 |
| Msa0639640 | Msa0691740 | 0.840584 | 7.961895e-58 | -8.615850e-47 |
| Msa0639640 | Msa0700250 | 0.814773 | 1.298838e-51 | -8.615850e-47 |
| Msa0639640 | Msa0704350 | 0.859821 | 3.171845e-63 | -8.615850e-47 |
| Msa0639640 | Msa0704430 | 0.880806 | 4.052379e-70 | -8.615850e-47 |
| Msa0639640 | Msa0707870 | 0.806464 | 8.122068e-50 | -8.615850e-47 |
| Msa0639640 | Msa0713590 | 0.802523 | 5.388686e-49 | -8.615850e-47 |
| Msa0639640 | Msa0714060 | 0.800833 | 1.197063e-48 | -8.615850e-47 |
| Msa0639640 | Msa0714200 | 0.800706 | 1.271031e-48 | -8.615850e-47 |
| Msa0639640 | Msa0747660 | 0.813246 | 2.820240e-51 | -8.615850e-47 |
| Msa0639640 | Msa0749130 | 0.801402 | 9.158510e-49 | -8.615850e-47 |
| Msa0639640 | Msa0755530 | 0.803603 | 3.222184e-49 | -8.615850e-47 |
| Msa0639640 | Msa0797210 | 0.801060 | 1.075967e-48 | -8.615850e-47 |
| Msa0639640 | Msa0857080 | 0.807265 | 5.500835e-50 | -8.615850e-47 |
| Msa0639640 | Msa0873070 | 0.808621 | 2.830616e-50 | -8.615850e-47 |
| Msa0639640 | Msa0880170 | 0.822189 | 2.705295e-53 | -8.615850e-47 |
| Msa0639640 | Msa0899080 | 0.808150 | 3.567752e-50 | -8.615850e-47 |
| Msa0639640 | Msa0906310 | 0.822478 | 2.318213e-53 | -8.615850e-47 |
| Msa0639640 | Msa0927890 | 0.820352 | 7.176901e-53 | -8.615850e-47 |
| Msa0639640 | Msa0934290 | 0.804041 | 2.612898e-49 | -8.615850e-47 |
| Msa0639640 | Msa0941320 | 0.810913 | 9.099567e-51 | -8.615850e-47 |
| Msa0639640 | Msa0967250 | 0.839620 | 1.421334e-57 | -8.615850e-47 |
| Msa0639640 | Msa0967260 | 0.826193 | 3.103417e-54 | -8.615850e-47 |
| Msa0639640 | Msa0975260 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0639640 | Msa0975460 | 0.820923 | 5.307795e-53 | -8.615850e-47 |
| Msa0639640 | Msa0978440 | 0.809718 | 1.647519e-50 | -8.615850e-47 |
| Msa0639640 | Msa0995670 | 0.817556 | 3.101408e-52 | -8.615850e-47 |
| Msa0639640 | Msa0998940 | 0.850438 | 1.698153e-60 | -8.615850e-47 |
| Msa0639640 | Msa1008960 | 0.800339 | 1.509445e-48 | -8.615850e-47 |
| Msa0639640 | Msa1038420 | 0.830362 | 3.064307e-55 | -8.615850e-47 |
| Msa0639640 | Msa1038570 | 0.827056 | 1.931155e-54 | -8.615850e-47 |
| Msa0639640 | Msa1038580 | 0.825345 | 4.931817e-54 | -8.615850e-47 |
| Msa0639640 | Msa1038610 | 0.833813 | 4.298175e-56 | -8.615850e-47 |
| Msa0639640 | Msa1068110 | 0.821333 | 4.268584e-53 | -8.615850e-47 |
| Msa0639640 | Msa1089130 | 0.805960 | 1.037184e-49 | -8.615850e-47 |
| Msa0639640 | Msa1090020 | 0.826226 | 3.047625e-54 | -8.615850e-47 |
| Msa0639640 | Msa1117830 | 0.803628 | 3.183505e-49 | -8.615850e-47 |
| Msa0639640 | Msa1125100 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0639640 | Msa1127530 | 0.803525 | 3.344578e-49 | -8.615850e-47 |
| Msa0639640 | Msa1129160 | 0.833473 | 5.225615e-56 | -8.615850e-47 |
| Msa0639640 | Msa1129320 | 0.854636 | 1.079038e-61 | -8.615850e-47 |
| Msa0639640 | Msa1143910 | 0.806724 | 7.159366e-50 | -8.615850e-47 |
| Msa0639640 | Msa1147600 | 0.826795 | 2.230014e-54 | -8.615850e-47 |
| Msa0639640 | Msa1161550 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
| Msa0639640 | Msa1182400 | 0.809861 | 1.534793e-50 | -8.615850e-47 |
| Msa0639640 | Msa1190980 | 0.837543 | 4.886706e-57 | -8.615850e-47 |
| Msa0639640 | Msa1198280 | 0.807059 | 6.081921e-50 | -8.615850e-47 |
| Msa0639640 | Msa1203840 | 0.831857 | 1.315624e-55 | -8.615850e-47 |
| Msa0639640 | Msa1203860 | 0.808550 | 2.931281e-50 | -8.615850e-47 |
| Msa0639640 | Msa1204380 | 0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0639640 | Msa1204390 | 0.816454 | 5.483717e-52 | -8.615850e-47 |
| Msa0639640 | Msa1211100 | 0.824791 | 6.666487e-54 | -8.615850e-47 |
| Msa0639640 | Msa1211120 | 0.826434 | 2.718377e-54 | -8.615850e-47 |
| Msa0639640 | Msa1216700 | 0.825675 | 4.119605e-54 | -8.615850e-47 |
| Msa0639640 | Msa1216900 | 0.808967 | 2.386724e-50 | -8.615850e-47 |
| Msa0639640 | Msa1230190 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0639640 | Msa1245300 | 0.830827 | 2.358095e-55 | -8.615850e-47 |
| Msa0639640 | Msa1262740 | 0.832026 | 1.195436e-55 | -8.615850e-47 |
| Msa0639640 | Msa1263970 | 0.801544 | 8.564404e-49 | -8.615850e-47 |
| Msa0639640 | Msa1293580 | 0.817930 | 2.553667e-52 | -8.615850e-47 |
| Msa0639640 | Msa1296600 | 0.809245 | 2.081238e-50 | -8.615850e-47 |
| Msa0639640 | Msa1310300 | 0.812942 | 3.289278e-51 | -8.615850e-47 |
| Msa0639640 | Msa1329010 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0639640 | Msa1329020 | 0.814723 | 1.332651e-51 | -8.615850e-47 |
| Msa0639640 | Msa1329660 | 0.829415 | 5.215572e-55 | -8.615850e-47 |
| Msa0639640 | Msa1330910 | 0.814042 | 1.883927e-51 | -8.615850e-47 |
| Msa0639640 | Msa1343540 | 0.819591 | 1.071743e-52 | -8.615850e-47 |
| Msa0639640 | Msa1346920 | 0.816074 | 6.669981e-52 | -8.615850e-47 |
| Msa0639640 | Msa1349410 | 0.824425 | 8.127838e-54 | -8.615850e-47 |
| Msa0639640 | Msa1350350 | 0.805555 | 1.261249e-49 | -8.615850e-47 |
| Msa0639640 | Msa1351560 | 0.808885 | 2.485265e-50 | -8.615850e-47 |
| Msa0639640 | Msa1351590 | 0.821772 | 3.380577e-53 | -8.615850e-47 |
| Msa0639640 | Msa1356730 | 0.805968 | 1.032999e-49 | -8.615850e-47 |
| Msa0639640 | Msa1364420 | 0.807754 | 4.330895e-50 | -8.615850e-47 |
| Msa0639640 | Msa1368660 | 0.816415 | 5.595184e-52 | -8.615850e-47 |
| Msa0639640 | Msa1388270 | 0.803148 | 4.002632e-49 | -8.615850e-47 |
| Msa0639640 | Msa1391600 | 0.803229 | 3.850481e-49 | -8.615850e-47 |
| Msa0639640 | Msa1395360 | 0.835981 | 1.222267e-56 | -8.615850e-47 |
| Msa0639640 | Msa1414790 | 0.831223 | 1.885155e-55 | -8.615850e-47 |
| Msa0639640 | Msa1432250 | 0.812377 | 4.370645e-51 | -8.615850e-47 |
| Msa0639640 | Msa1440160 | 0.886483 | 3.289856e-72 | -8.615850e-47 |
| Msa0639640 | Msa1443440 | 0.818459 | 1.938415e-52 | -8.615850e-47 |
| Msa0639640 | Msa1446220 | 0.821386 | 4.149952e-53 | -8.615850e-47 |
| Msa0639640 | Msa1456410 | 0.812786 | 3.558789e-51 | -8.615850e-47 |
| Msa0639640 | Msa1459630 | 0.800847 | 1.189198e-48 | -8.615850e-47 |
| Msa0134120 | Msa0639640 | 0.800098 | 1.690346e-48 | -8.615850e-47 |
| Msa0138380 | Msa0639640 | 0.820507 | 6.614900e-53 | -8.615850e-47 |
| Msa0155350 | Msa0639640 | 0.810092 | 1.368412e-50 | -8.615850e-47 |
| Msa0184850 | Msa0639640 | 0.837110 | 6.305027e-57 | -8.615850e-47 |
| Msa0187560 | Msa0639640 | 0.856544 | 2.995400e-62 | -8.615850e-47 |
| Msa0197600 | Msa0639640 | 0.841300 | 5.165858e-58 | -8.615850e-47 |
| Msa0198140 | Msa0639640 | 0.815149 | 1.071815e-51 | -8.615850e-47 |
| Msa0198220 | Msa0639640 | 0.820498 | 6.645225e-53 | -8.615850e-47 |
| Msa0201910 | Msa0639640 | 0.809934 | 1.480286e-50 | -8.615850e-47 |
| Msa0210870 | Msa0639640 | 0.822176 | 2.724491e-53 | -8.615850e-47 |
| Msa0221940 | Msa0639640 | 0.826405 | 2.763043e-54 | -8.615850e-47 |
| Msa0227960 | Msa0639640 | 0.818215 | 2.201781e-52 | -8.615850e-47 |
| Msa0373110 | Msa0639640 | 0.834627 | 2.686781e-56 | -8.615850e-47 |
| Msa0379720 | Msa0639640 | 0.828023 | 1.131584e-54 | -8.615850e-47 |
| Msa0381990 | Msa0639640 | 0.819164 | 1.341131e-52 | -8.615850e-47 |
| Msa0390840 | Msa0639640 | 0.829582 | 4.749509e-55 | -8.615850e-47 |
| Msa0413590 | Msa0639640 | 0.905653 | 3.420090e-80 | -8.615850e-47 |
| Msa0421480 | Msa0639640 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa0429100 | Msa0639640 | 0.828826 | 7.245157e-55 | -8.615850e-47 |
| Msa0429130 | Msa0639640 | 0.808733 | 2.678934e-50 | -8.615850e-47 |
| Msa0431310 | Msa0639640 | 0.801633 | 8.213129e-49 | -8.615850e-47 |
| Msa0431940 | Msa0639640 | 0.813536 | 2.435505e-51 | -8.615850e-47 |
| Msa0458690 | Msa0639640 | 0.889821 | 1.717301e-73 | -8.615850e-47 |
| Msa0459920 | Msa0639640 | 0.813192 | 2.899036e-51 | -8.615850e-47 |
| Msa0467480 | Msa0639640 | 0.841774 | 3.873978e-58 | -8.615850e-47 |
| Msa0469840 | Msa0639640 | 0.816358 | 5.764190e-52 | -8.615850e-47 |
| Msa0476490 | Msa0639640 | 0.811173 | 7.992409e-51 | -8.615850e-47 |
| Msa0481620 | Msa0639640 | 0.850184 | 2.000436e-60 | -8.615850e-47 |
| Msa0240290 | Msa0639640 | 0.841776 | 3.870389e-58 | -8.615850e-47 |
| Msa0240460 | Msa0639640 | 0.818822 | 1.603745e-52 | -8.615850e-47 |
| Msa0244370 | Msa0639640 | 0.823829 | 1.122056e-53 | -8.615850e-47 |
| Msa0249670 | Msa0639640 | 0.805513 | 1.287700e-49 | -8.615850e-47 |
| Msa0263470 | Msa0639640 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa0263520 | Msa0639640 | 0.806688 | 7.283208e-50 | -8.615850e-47 |
| Msa0278080 | Msa0639640 | 0.823289 | 1.500769e-53 | -8.615850e-47 |
| Msa0278340 | Msa0639640 | 0.816813 | 4.557972e-52 | -8.615850e-47 |
| Msa0282880 | Msa0639640 | 0.820439 | 6.856278e-53 | -8.615850e-47 |
| Msa0317630 | Msa0639640 | 0.826901 | 2.103409e-54 | -8.615850e-47 |
| Msa0321180 | Msa0639640 | 0.820957 | 5.211666e-53 | -8.615850e-47 |
| Msa0321200 | Msa0639640 | 0.822210 | 2.676480e-53 | -8.615850e-47 |
| Msa0324390 | Msa0639640 | 0.823444 | 1.380476e-53 | -8.615850e-47 |
| Msa0324430 | Msa0639640 | 0.808366 | 3.208593e-50 | -8.615850e-47 |
| Msa0327870 | Msa0639640 | 0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa0338610 | Msa0639640 | 0.805220 | 1.482957e-49 | -8.615850e-47 |
| Msa0338670 | Msa0639640 | 0.807285 | 5.445393e-50 | -8.615850e-47 |
| Msa0343460 | Msa0639640 | 0.877925 | 4.249646e-69 | -8.615850e-47 |
| Msa0358720 | Msa0639640 | 0.814813 | 1.272515e-51 | -8.615850e-47 |
| Msa0515400 | Msa0639640 | 0.859117 | 5.163028e-63 | -8.615850e-47 |
| Msa0515420 | Msa0639640 | 0.857580 | 1.481226e-62 | -8.615850e-47 |
| Msa0520810 | Msa0639640 | 0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0538100 | Msa0639640 | 0.810097 | 1.365651e-50 | -8.615850e-47 |
| Msa0542330 | Msa0639640 | 0.905160 | 5.752834e-80 | -8.615850e-47 |
| Msa0546020 | Msa0639640 | 0.806888 | 6.609698e-50 | -8.615850e-47 |
| Msa0553570 | Msa0639640 | 0.808432 | 3.106803e-50 | -8.615850e-47 |
| Msa0555510 | Msa0639640 | 0.838538 | 2.710421e-57 | -8.615850e-47 |
| Msa0563230 | Msa0639640 | 0.810327 | 1.217996e-50 | -8.615850e-47 |
| Msa0564580 | Msa0639640 | 0.805321 | 1.412141e-49 | -8.615850e-47 |
| Msa0568050 | Msa0639640 | 0.880392 | 5.700307e-70 | -8.615850e-47 |
| Msa0569630 | Msa0639640 | 0.832934 | 7.119558e-56 | -8.615850e-47 |
| Msa0584590 | Msa0639640 | 0.924294 | 8.537113e-90 | -8.615850e-47 |
| Msa0585770 | Msa0639640 | 0.810376 | 1.188630e-50 | -8.615850e-47 |
| Msa0587060 | Msa0639640 | 0.811840 | 5.725536e-51 | -8.615850e-47 |
| Msa0587070 | Msa0639640 | 0.801855 | 7.395189e-49 | -8.615850e-47 |
| Msa0595240 | Msa0639640 | 0.819220 | 1.301804e-52 | -8.615850e-47 |
| Msa0600500 | Msa0639640 | 0.906749 | 1.064222e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639640 | MtrunA17_Chr4g0021981 | 99.701 | 335 | 1 | 0 | 1 | 335 | 35 | 369 | 0.0 | 698 |
| Msa0639640 | MtrunA17_Chr4g0022021 | 85.672 | 335 | 48 | 0 | 1 | 335 | 35 | 369 | 0.0 | 615 |
| Msa0639640 | MtrunA17_Chr3g0121301 | 39.039 | 333 | 192 | 6 | 4 | 332 | 34 | 359 | 3.91e-81 | 251 |
| Msa0639640 | MtrunA17_Chr5g0432251 | 41.935 | 341 | 186 | 7 | 1 | 334 | 24 | 359 | 6.46e-81 | 250 |
| Msa0639640 | MtrunA17_Chr5g0432301 | 39.466 | 337 | 194 | 6 | 3 | 333 | 27 | 359 | 1.08e-77 | 242 |
| Msa0639640 | MtrunA17_Chr5g0432241 | 39.233 | 339 | 194 | 7 | 3 | 334 | 27 | 360 | 1.06e-72 | 229 |
| Msa0639640 | MtrunA17_Chr7g0276401 | 41.590 | 327 | 171 | 10 | 2 | 315 | 37 | 356 | 2.12e-72 | 229 |
| Msa0639640 | MtrunA17_Chr7g0276411 | 38.318 | 321 | 179 | 11 | 7 | 315 | 30 | 343 | 1.38e-70 | 224 |
| Msa0639640 | MtrunA17_Chr3g0128011 | 36.364 | 319 | 190 | 8 | 10 | 320 | 90 | 403 | 2.53e-67 | 217 |
| Msa0639640 | MtrunA17_Chr5g0448091 | 38.838 | 327 | 172 | 11 | 10 | 320 | 35 | 349 | 2.92e-67 | 215 |
| Msa0639640 | MtrunA17_Chr8g0345851 | 46.341 | 246 | 123 | 6 | 73 | 315 | 32 | 271 | 4.22e-65 | 207 |
| Msa0639640 | MtrunA17_Chr5g0432211 | 37.202 | 336 | 191 | 7 | 3 | 334 | 26 | 345 | 1.08e-64 | 208 |
| Msa0639640 | MtrunA17_Chr4g0040621 | 36.416 | 346 | 189 | 8 | 4 | 334 | 40 | 369 | 1.39e-64 | 208 |
| Msa0639640 | MtrunA17_Chr5g0432261 | 37.168 | 339 | 177 | 7 | 1 | 334 | 20 | 327 | 3.30e-64 | 206 |
| Msa0639640 | MtrunA17_Chr8g0367491 | 36.176 | 340 | 192 | 12 | 3 | 324 | 36 | 368 | 4.16e-64 | 207 |
| Msa0639640 | MtrunA17_Chr1g0188391 | 36.628 | 344 | 202 | 9 | 1 | 334 | 24 | 361 | 5.95e-64 | 206 |
| Msa0639640 | MtrunA17_Chr7g0219161 | 38.298 | 329 | 185 | 8 | 1 | 320 | 24 | 343 | 7.13e-62 | 201 |
| Msa0639640 | MtrunA17_Chr8g0367441 | 36.593 | 317 | 184 | 9 | 10 | 315 | 48 | 358 | 2.66e-61 | 200 |
| Msa0639640 | MtrunA17_Chr7g0219141 | 35.447 | 347 | 198 | 9 | 1 | 334 | 24 | 357 | 4.01e-59 | 194 |
| Msa0639640 | MtrunA17_Chr8g0367451 | 35.202 | 321 | 191 | 9 | 10 | 319 | 47 | 361 | 1.27e-58 | 193 |
| Msa0639640 | MtrunA17_Chr8g0367501 | 35.849 | 318 | 187 | 9 | 9 | 315 | 33 | 344 | 1.73e-58 | 194 |
| Msa0639640 | MtrunA17_Chr7g0223231 | 34.441 | 331 | 205 | 7 | 4 | 331 | 26 | 347 | 1.16e-57 | 190 |
| Msa0639640 | MtrunA17_Chr7g0223241 | 34.639 | 332 | 205 | 6 | 3 | 331 | 25 | 347 | 1.96e-57 | 189 |
| Msa0639640 | MtrunA17_Chr1g0188371 | 35.873 | 315 | 189 | 9 | 8 | 314 | 31 | 340 | 4.11e-55 | 184 |
| Msa0639640 | MtrunA17_Chr8g0367381 | 48.649 | 185 | 92 | 3 | 119 | 302 | 144 | 326 | 2.13e-54 | 181 |
| Msa0639640 | MtrunA17_Chr4g0046531 | 34.320 | 338 | 213 | 7 | 1 | 334 | 386 | 718 | 5.98e-54 | 188 |
| Msa0639640 | MtrunA17_Chr4g0046531 | 33.828 | 337 | 214 | 7 | 1 | 333 | 24 | 355 | 6.67e-53 | 185 |
| Msa0639640 | MtrunA17_Chr4g0046361 | 33.038 | 339 | 215 | 8 | 4 | 334 | 27 | 361 | 1.32e-53 | 179 |
| Msa0639640 | MtrunA17_Chr4g0014641 | 34.897 | 341 | 208 | 8 | 4 | 334 | 27 | 363 | 2.26e-53 | 179 |
| Msa0639640 | MtrunA17_Chr3g0085211 | 34.688 | 320 | 195 | 10 | 10 | 321 | 43 | 356 | 1.32e-51 | 174 |
| Msa0639640 | MtrunA17_Chr7g0218301 | 35.866 | 329 | 186 | 10 | 10 | 321 | 41 | 361 | 3.17e-51 | 174 |
| Msa0639640 | MtrunA17_Chr2g0307521 | 35.514 | 321 | 186 | 10 | 10 | 318 | 35 | 346 | 6.37e-51 | 172 |
| Msa0639640 | MtrunA17_Chr4g0014561 | 35.088 | 342 | 208 | 8 | 3 | 334 | 26 | 363 | 8.86e-51 | 172 |
| Msa0639640 | MtrunA17_Chr7g0218271 | 36.474 | 329 | 184 | 10 | 10 | 321 | 41 | 361 | 2.35e-50 | 171 |
| Msa0639640 | MtrunA17_Chr1g0200491 | 34.985 | 323 | 192 | 8 | 10 | 320 | 41 | 357 | 6.24e-50 | 170 |
| Msa0639640 | MtrunA17_Chr7g0218211 | 35.185 | 324 | 190 | 11 | 10 | 321 | 40 | 355 | 7.26e-50 | 170 |
| Msa0639640 | MtrunA17_Chr4g0014681 | 34.795 | 342 | 209 | 8 | 3 | 334 | 26 | 363 | 8.65e-50 | 170 |
| Msa0639640 | MtrunA17_Chr1g0163621 | 33.333 | 324 | 196 | 11 | 10 | 320 | 52 | 368 | 9.37e-50 | 170 |
| Msa0639640 | MtrunA17_Chr4g0046341 | 34.694 | 343 | 207 | 9 | 4 | 334 | 27 | 364 | 4.20e-49 | 168 |
| Msa0639640 | MtrunA17_Chr7g0218261 | 35.093 | 322 | 192 | 11 | 10 | 321 | 40 | 354 | 1.05e-48 | 167 |
| Msa0639640 | MtrunA17_Chr1g0163611 | 32.743 | 339 | 206 | 12 | 10 | 333 | 38 | 369 | 1.28e-48 | 167 |
| Msa0639640 | MtrunA17_Chr1g0163601 | 33.642 | 324 | 195 | 11 | 10 | 320 | 38 | 354 | 3.42e-48 | 166 |
| Msa0639640 | MtrunA17_Chr7g0218181 | 33.951 | 324 | 191 | 11 | 10 | 321 | 41 | 353 | 2.05e-47 | 164 |
| Msa0639640 | MtrunA17_Chr3g0085201 | 32.500 | 320 | 202 | 9 | 10 | 321 | 30 | 343 | 2.61e-47 | 163 |
| Msa0639640 | MtrunA17_Chr3g0130011 | 32.523 | 329 | 212 | 8 | 9 | 331 | 31 | 355 | 4.59e-47 | 162 |
| Msa0639640 | MtrunA17_Chr2g0314271 | 33.739 | 329 | 207 | 9 | 9 | 331 | 28 | 351 | 4.79e-47 | 162 |
| Msa0639640 | MtrunA17_Chr7g0218131 | 34.056 | 323 | 193 | 10 | 10 | 320 | 41 | 355 | 5.68e-47 | 162 |
| Msa0639640 | MtrunA17_Chr3g0130061 | 31.818 | 330 | 213 | 9 | 9 | 331 | 31 | 355 | 1.26e-43 | 153 |
| Msa0639640 | MtrunA17_Chr4g0014661 | 32.647 | 340 | 213 | 8 | 3 | 334 | 26 | 357 | 5.81e-42 | 149 |
| Msa0639640 | MtrunA17_Chr4g0014591 | 32.047 | 337 | 219 | 7 | 3 | 334 | 26 | 357 | 1.84e-38 | 140 |
| Msa0639640 | MtrunA17_Chr6g0482291 | 42.857 | 161 | 81 | 4 | 156 | 315 | 7 | 157 | 1.78e-37 | 132 |
| Msa0639640 | MtrunA17_Chr8g0367401 | 49.091 | 110 | 55 | 1 | 127 | 236 | 2 | 110 | 2.22e-30 | 112 |
| Msa0639640 | MtrunA17_Chr7g0219171 | 42.537 | 134 | 72 | 3 | 204 | 334 | 117 | 248 | 6.58e-30 | 114 |
| Msa0639640 | MtrunA17_Chr4g0011691 | 46.875 | 96 | 51 | 0 | 238 | 333 | 140 | 235 | 1.36e-26 | 105 |
| Msa0639640 | MtrunA17_Chr4g0014601 | 30.672 | 238 | 161 | 4 | 3 | 239 | 26 | 260 | 7.16e-25 | 101 |
| Msa0639640 | MtrunA17_Chr8g0367461 | 46.316 | 95 | 47 | 3 | 223 | 315 | 1 | 93 | 4.12e-20 | 84.3 |
| Msa0639640 | MtrunA17_Chr1g0170941 | 53.333 | 75 | 34 | 1 | 159 | 233 | 2 | 75 | 1.44e-19 | 81.6 |
| Msa0639640 | MtrunA17_Chr8g0367421 | 40.000 | 110 | 48 | 2 | 127 | 236 | 2 | 93 | 5.42e-18 | 79.0 |
| Msa0639640 | MtrunA17_Chr8g0367391 | 46.512 | 86 | 42 | 4 | 232 | 315 | 32 | 115 | 2.95e-17 | 77.4 |
| Msa0639640 | MtrunA17_Chr8g0367471 | 42.105 | 76 | 43 | 1 | 150 | 225 | 1 | 75 | 6.85e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639640 | AT5G54160.1 | 38.318 | 321 | 185 | 7 | 8 | 321 | 34 | 348 | 9.17e-73 | 229 |
| Msa0639640 | AT1G77520.1 | 37.574 | 338 | 190 | 9 | 10 | 331 | 46 | 378 | 9.44e-65 | 209 |
| Msa0639640 | AT4G35160.1 | 34.393 | 346 | 206 | 6 | 4 | 333 | 40 | 380 | 1.26e-61 | 201 |
| Msa0639640 | AT1G51990.1 | 32.840 | 338 | 211 | 9 | 8 | 334 | 30 | 362 | 6.97e-57 | 189 |
| Msa0639640 | AT1G33030.1 | 36.760 | 321 | 186 | 11 | 10 | 320 | 23 | 336 | 9.37e-56 | 185 |
| Msa0639640 | AT1G63140.2 | 36.364 | 330 | 189 | 9 | 8 | 321 | 44 | 368 | 9.51e-55 | 184 |
| Msa0639640 | AT1G63140.4 | 36.474 | 329 | 188 | 9 | 9 | 321 | 65 | 388 | 1.46e-54 | 184 |
| Msa0639640 | AT1G51990.2 | 32.544 | 338 | 212 | 9 | 8 | 334 | 30 | 362 | 1.94e-54 | 182 |
| Msa0639640 | AT1G77530.1 | 37.353 | 340 | 192 | 10 | 8 | 331 | 44 | 378 | 2.40e-54 | 182 |
| Msa0639640 | AT4G35150.1 | 30.294 | 340 | 185 | 7 | 4 | 333 | 26 | 323 | 8.04e-53 | 177 |
| Msa0639640 | AT5G53810.1 | 34.694 | 343 | 196 | 10 | 10 | 335 | 42 | 373 | 3.28e-52 | 177 |
| Msa0639640 | AT3G53140.1 | 34.821 | 336 | 201 | 10 | 8 | 331 | 27 | 356 | 1.41e-49 | 169 |
| Msa0639640 | AT1G62900.1 | 45.026 | 191 | 101 | 3 | 133 | 321 | 4 | 192 | 2.20e-48 | 162 |
| Msa0639640 | AT5G37170.2 | 36.052 | 233 | 142 | 5 | 104 | 331 | 1 | 231 | 6.60e-46 | 156 |
| Msa0639640 | AT1G21130.1 | 35.207 | 338 | 197 | 13 | 10 | 333 | 42 | 371 | 6.91e-46 | 160 |
| Msa0639640 | AT1G21100.1 | 35.207 | 338 | 197 | 12 | 10 | 333 | 42 | 371 | 1.27e-45 | 159 |
| Msa0639640 | AT5G37170.1 | 32.792 | 308 | 176 | 10 | 29 | 331 | 50 | 331 | 4.85e-45 | 157 |
| Msa0639640 | AT1G21120.1 | 34.320 | 338 | 200 | 12 | 10 | 333 | 42 | 371 | 5.05e-44 | 155 |
| Msa0639640 | AT1G21110.1 | 33.728 | 338 | 202 | 12 | 10 | 333 | 42 | 371 | 1.35e-43 | 154 |
| Msa0639640 | AT1G21120.2 | 34.320 | 338 | 200 | 12 | 10 | 333 | 90 | 419 | 1.44e-43 | 155 |
| Msa0639640 | AT1G76790.1 | 34.954 | 329 | 189 | 12 | 10 | 321 | 32 | 352 | 2.37e-41 | 148 |
| Msa0639640 | AT5G37170.3 | 39.560 | 182 | 105 | 4 | 153 | 331 | 4 | 183 | 7.99e-41 | 141 |
| Msa0639640 | AT1G33030.2 | 35.745 | 235 | 138 | 8 | 10 | 236 | 23 | 252 | 4.54e-31 | 118 |
| Msa0639640 | AT1G33030.3 | 35.745 | 235 | 138 | 8 | 10 | 236 | 23 | 252 | 6.26e-31 | 118 |
| Msa0639640 | AT1G63140.1 | 32.780 | 241 | 144 | 7 | 10 | 236 | 66 | 302 | 1.54e-26 | 107 |
| Msa0639640 | AT1G21130.2 | 33.891 | 239 | 140 | 10 | 10 | 236 | 42 | 274 | 3.24e-21 | 92.4 |
| Msa0639640 | AT1G63140.3 | 30.556 | 216 | 132 | 7 | 10 | 211 | 66 | 277 | 9.54e-17 | 79.7 |
| Msa0639640 | AT1G77530.2 | 32.727 | 220 | 130 | 8 | 10 | 215 | 46 | 261 | 6.88e-15 | 74.3 |
Find 103 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAACCAAAGACTTAATT+TGG | 0.166048 | 4_3:+36218814 | None:intergenic |
| CAATATAAAATTAAAGAAAT+TGG | 0.177243 | 4_3:-36217844 | Msa0639640:three_prime_UTR |
| GTAAATGGTTCATTTCCTTC+TGG | 0.225351 | 4_3:+36218369 | None:intergenic |
| TGTTTGGACAAATTGAAATA+TGG | 0.246997 | 4_3:-36219352 | Msa0639640:five_prime_UTR |
| GTTTAACCAAATTAAGTCTT+TGG | 0.277241 | 4_3:-36218820 | Msa0639640:CDS |
| TGGGTGATACCATCAAAATT+AGG | 0.296621 | 4_3:+36218693 | None:intergenic |
| AAAATGGCACTGCTTTCTTT+AGG | 0.298524 | 4_3:-36218968 | Msa0639640:CDS |
| GCTATCCCAGTGTCGGTAAA+TGG | 0.307296 | 4_3:+36218354 | None:intergenic |
| GGGTGATACCATCAAAATTA+GGG | 0.313744 | 4_3:+36218694 | None:intergenic |
| GCTTGACACGTGCATCAAAA+TGG | 0.327202 | 4_3:-36219100 | Msa0639640:CDS |
| CTTAAAAGTAAAGTGGAATC+AGG | 0.331497 | 4_3:+36219194 | None:intergenic |
| TAAATGGTTCATTTCCTTCT+GGG | 0.333897 | 4_3:+36218370 | None:intergenic |
| TTGTGTTGTGTGGCTTTACT+TGG | 0.351030 | 4_3:-36218122 | Msa0639640:three_prime_UTR |
| ATTCTGCACAATTTGAGTTA+AGG | 0.365186 | 4_3:+36219235 | None:intergenic |
| GAAGAAGAAGAATCATTGTT+TGG | 0.372460 | 4_3:-36219368 | Msa0639640:five_prime_UTR |
| TAAAGATATTGAAGAATTGT+AGG | 0.382866 | 4_3:-36218446 | Msa0639640:CDS |
| GTGTCGAGGGCTGTTATTGC+TGG | 0.396054 | 4_3:-36218855 | Msa0639640:CDS |
| AAAGGGGAATACTCAGTGTT+TGG | 0.413441 | 4_3:-36219501 | Msa0639640:five_prime_UTR |
| ACAATTTGAGTTAAGGATAG+TGG | 0.413559 | 4_3:+36219242 | None:intergenic |
| ATTAGTGAAATTATAAAAGA+AGG | 0.414681 | 4_3:-36218996 | Msa0639640:CDS |
| AAGAAAGAACTGAAGAGAAC+TGG | 0.424963 | 4_3:-36218293 | Msa0639640:CDS |
| CATCTTCCATGAATTTAGAC+TGG | 0.428951 | 4_3:+36218189 | None:intergenic |
| TTAGCAGGGTTCAAATGAAA+AGG | 0.429287 | 4_3:+36219023 | None:intergenic |
| AATATAAAATTAAAGAAATT+GGG | 0.434737 | 4_3:-36217843 | Msa0639640:three_prime_UTR |
| ATTTCACTAATAAAGTTAGC+AGG | 0.435103 | 4_3:+36219008 | None:intergenic |
| AGTCTTTGGTTGATGTTGGC+GGG | 0.446010 | 4_3:-36218806 | Msa0639640:CDS |
| GCATTCCCAGTCTAAATTCA+TGG | 0.449506 | 4_3:-36218195 | Msa0639640:exon |
| ACTGCTTTCTTTAGGTGTCA+TGG | 0.450664 | 4_3:-36218960 | Msa0639640:CDS |
| AAGTCTTTGGTTGATGTTGG+CGG | 0.462461 | 4_3:-36218807 | Msa0639640:CDS |
| CATGAACAATTTGAAATGAC+GGG | 0.462928 | 4_3:-36218936 | Msa0639640:CDS |
| AGGATAGTGGTTTGCCATAA+CGG | 0.463766 | 4_3:+36219255 | None:intergenic |
| TTCAAATTATGATACACAAA+AGG | 0.466985 | 4_3:+36218074 | None:intergenic |
| ATGGAAGATGATGAGTTTGT+TGG | 0.475780 | 4_3:-36218176 | Msa0639640:three_prime_UTR |
| AAGGCAATACCAGAGAAAAC+AGG | 0.476074 | 4_3:-36218423 | Msa0639640:CDS |
| AATTAAAGAAATTGGGTCAT+GGG | 0.478858 | 4_3:-36217836 | Msa0639640:three_prime_UTR |
| GGCAGTGGATTCTTCATGAC+TGG | 0.484877 | 4_3:-36218485 | Msa0639640:intron |
| CATTACTCTTAAAAGTAAAG+TGG | 0.485083 | 4_3:+36219187 | None:intergenic |
| TTAAAAGTAAAGTGGAATCA+GGG | 0.488590 | 4_3:+36219195 | None:intergenic |
| TAACTTTGATTTGCCTCATG+TGG | 0.490029 | 4_3:-36218727 | Msa0639640:CDS |
| ATTAAGTCTTTGGTTGATGT+TGG | 0.491660 | 4_3:-36218810 | Msa0639640:CDS |
| AAACATGTCTCCTCCAACAT+GGG | 0.498630 | 4_3:+36218674 | None:intergenic |
| CGCTGATGCTATTTACATGA+AGG | 0.503925 | 4_3:-36218637 | Msa0639640:intron |
| GTCTTTGGTTGATGTTGGCG+GGG | 0.504180 | 4_3:-36218805 | Msa0639640:CDS |
| TTTGATGGTATCACCCATGT+TGG | 0.511129 | 4_3:-36218687 | Msa0639640:CDS |
| GCCGACATTATAGACCGTTA+TGG | 0.518244 | 4_3:-36219269 | Msa0639640:CDS |
| AATGAACCATTTACCGACAC+TGG | 0.520366 | 4_3:-36218360 | Msa0639640:CDS |
| TGACTTGTTCAACCAAGGTA+TGG | 0.521535 | 4_3:-36218895 | Msa0639640:CDS |
| GATGGTATCACCCATGTTGG+AGG | 0.521547 | 4_3:-36218684 | Msa0639640:CDS |
| AGCTAGCTATGATTCATGCA+TGG | 0.523703 | 4_3:-36218028 | Msa0639640:three_prime_UTR |
| AAATTAAAGAAATTGGGTCA+TGG | 0.525972 | 4_3:-36217837 | Msa0639640:three_prime_UTR |
| GATCATTGTGGATCATGTAT+TGG | 0.533084 | 4_3:-36218394 | Msa0639640:CDS |
| ACAATTTGAAATGACGGGGT+TGG | 0.533144 | 4_3:-36218931 | Msa0639640:CDS |
| TCTTCAATATCTTTATGCAA+TGG | 0.534210 | 4_3:+36218454 | None:intergenic |
| CAAACATGTCTCCTCCAACA+TGG | 0.536952 | 4_3:+36218673 | None:intergenic |
| AAATACTTATTCAACGAGAC+AGG | 0.536963 | 4_3:-36218270 | Msa0639640:CDS |
| TTTCACTAATAAAGTTAGCA+GGG | 0.540307 | 4_3:+36219009 | None:intergenic |
| GCTAGCTATGATTCATGCAT+GGG | 0.540353 | 4_3:-36218027 | Msa0639640:three_prime_UTR |
| GCCATAACGGTCTATAATGT+CGG | 0.543704 | 4_3:+36219268 | None:intergenic |
| TAGCAGGGTTCAAATGAAAA+GGG | 0.549937 | 4_3:+36219024 | None:intergenic |
| CATGAATCATAGCTAGCTCT+AGG | 0.551516 | 4_3:+36218033 | None:intergenic |
| AGGATAAGCTCTAACAATCT+CGG | 0.552345 | 4_3:+36218764 | None:intergenic |
| TCATGAACAATTTGAAATGA+CGG | 0.554113 | 4_3:-36218937 | Msa0639640:CDS |
| TTATTGCTGGATACAAAGAC+GGG | 0.555238 | 4_3:-36218842 | Msa0639640:CDS |
| TTCGTATGTGTTGTGTTGTG+TGG | 0.557358 | 4_3:-36218132 | Msa0639640:three_prime_UTR |
| GATATTGAAGAATTGTAGGA+AGG | 0.557857 | 4_3:-36218442 | Msa0639640:CDS |
| GTTATTGCTGGATACAAAGA+CGG | 0.560406 | 4_3:-36218843 | Msa0639640:CDS |
| TATTGATCAGGGTGTGAGCA+AGG | 0.560573 | 4_3:-36219390 | Msa0639640:five_prime_UTR |
| CTGCTATCTGATCTGCTGAT+GGG | 0.562055 | 4_3:+36217990 | None:intergenic |
| TTTAAGAGTAATGAGAGTGA+TGG | 0.566393 | 4_3:-36219177 | Msa0639640:CDS |
| ATCTTCCATGAATTTAGACT+GGG | 0.572590 | 4_3:+36218190 | None:intergenic |
| CACCGCTAGAATTGTGTCGA+GGG | 0.576078 | 4_3:-36218868 | Msa0639640:CDS |
| AAGTAAAGTGGAATCAGGGG+AGG | 0.581812 | 4_3:+36219199 | None:intergenic |
| TAGCGGTGCAAACCATACCT+TGG | 0.586631 | 4_3:+36218883 | None:intergenic |
| TCTGCTATCTGATCTGCTGA+TGG | 0.591530 | 4_3:+36217989 | None:intergenic |
| GCACCGCTAGAATTGTGTCG+AGG | 0.594031 | 4_3:-36218869 | Msa0639640:CDS |
| CAAGCCGTAGAGAATTTCAC+CGG | 0.596458 | 4_3:+36219118 | None:intergenic |
| ATGTAAATAGCATCAGCGCT+AGG | 0.599582 | 4_3:+36218642 | None:intergenic |
| GTCAAATGCTATCCCAGTGT+CGG | 0.602762 | 4_3:+36218347 | None:intergenic |
| TCTTTGGTTGATGTTGGCGG+GGG | 0.603652 | 4_3:-36218804 | Msa0639640:CDS |
| TGCTCTGCCATGCATCATTG+AGG | 0.607068 | 4_3:-36218217 | Msa0639640:CDS |
| ATGTTGCTTGCTCACAACGC+TGG | 0.609694 | 4_3:-36218321 | Msa0639640:CDS |
| ATGAACCATTTACCGACACT+GGG | 0.609768 | 4_3:-36218359 | Msa0639640:CDS |
| AAGTTAATAGCTTGAATGTG+AGG | 0.610156 | 4_3:+36218744 | None:intergenic |
| GAAACCGGTGAAATTCTCTA+CGG | 0.611119 | 4_3:-36219122 | Msa0639640:CDS |
| AACAGGAAAGGTGATCATTG+TGG | 0.615274 | 4_3:-36218406 | Msa0639640:CDS |
| AATAGCATCAGCGCTAGGAA+CGG | 0.623697 | 4_3:+36218647 | None:intergenic |
| TACAATGACTTGTTCAACCA+AGG | 0.624846 | 4_3:-36218900 | Msa0639640:CDS |
| AGCTATGATTCATGCATGGG+GGG | 0.627479 | 4_3:-36218024 | Msa0639640:three_prime_UTR |
| TAAAAGTAAAGTGGAATCAG+GGG | 0.636147 | 4_3:+36219196 | None:intergenic |
| CTAGCTATGATTCATGCATG+GGG | 0.649012 | 4_3:-36218026 | Msa0639640:three_prime_UTR |
| AGTAAAGTGGAATCAGGGGA+GGG | 0.649036 | 4_3:+36219200 | None:intergenic |
| TGATTCTCTAGCAACAACAT+TGG | 0.649459 | 4_3:+36219047 | None:intergenic |
| GATCATGTATTGGACCCAGA+AGG | 0.652817 | 4_3:-36218384 | Msa0639640:CDS |
| GGGAATGCCTCAATGATGCA+TGG | 0.663145 | 4_3:+36218210 | None:intergenic |
| AATACCAGAGAAAACAGGAA+AGG | 0.671132 | 4_3:-36218418 | Msa0639640:CDS |
| ATGAACAATTTGAAATGACG+GGG | 0.676832 | 4_3:-36218935 | Msa0639640:CDS |
| GGTGATACCATCAAAATTAG+GGG | 0.681590 | 4_3:+36218695 | None:intergenic |
| TTGCTTGCTCACAACGCTGG+TGG | 0.684054 | 4_3:-36218318 | Msa0639640:CDS |
| GAATCATAGCTAGCTCTAGG+TGG | 0.688847 | 4_3:+36218036 | None:intergenic |
| AGCCCTCGACACAATTCTAG+CGG | 0.693934 | 4_3:+36218866 | None:intergenic |
| GATACCATCAAAATTAGGGG+CGG | 0.701505 | 4_3:+36218698 | None:intergenic |
| TAGCTATGATTCATGCATGG+GGG | 0.705108 | 4_3:-36218025 | Msa0639640:three_prime_UTR |
| GGGGCGGTTGAAACCACATG+AGG | 0.705484 | 4_3:+36218714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATATAAAATTAAAGAAAT+TGG | - | chr4_3:36219546-36219565 | Msa0639640:five_prime_UTR | 10.0% |
| !! | CAATATAAAATTAAAGAAAT+TGG | - | chr4_3:36219546-36219565 | Msa0639640:five_prime_UTR | 10.0% |
| !! | ATTAGTGAAATTATAAAAGA+AGG | - | chr4_3:36218394-36218413 | Msa0639640:CDS | 15.0% |
| !! | ACACATGAATTTAATTATAA+TGG | - | chr4_3:36218832-36218851 | Msa0639640:CDS | 15.0% |
| !! | ATTAGTGAAATTATAAAAGA+AGG | - | chr4_3:36218394-36218413 | Msa0639640:CDS | 15.0% |
| !! | ACACATGAATTTAATTATAA+TGG | - | chr4_3:36218832-36218851 | Msa0639640:CDS | 15.0% |
| !! | TTGCAGATATAAAAAATGTT+TGG | - | chr4_3:36217917-36217936 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | AATCAAGTTTTATATTGATC+AGG | - | chr4_3:36217988-36218007 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | ATCAAGTTTTATATTGATCA+GGG | - | chr4_3:36217989-36218008 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | TTTAAAATTGACCTTATCTT+TGG | - | chr4_3:36218876-36218895 | Msa0639640:CDS | 20.0% |
| !! | TTAAAATTGACCTTATCTTT+GGG | - | chr4_3:36218877-36218896 | Msa0639640:CDS | 20.0% |
| !! | TAAAGATATTGAAGAATTGT+AGG | - | chr4_3:36218944-36218963 | Msa0639640:CDS | 20.0% |
| !! | TTCAAATTATGATACACAAA+AGG | + | chr4_3:36219319-36219338 | None:intergenic | 20.0% |
| !!! | AGTTAAATGAATTTTAGAAG+AGG | + | chr4_3:36219514-36219533 | None:intergenic | 20.0% |
| !! | TTGCAGATATAAAAAATGTT+TGG | - | chr4_3:36217917-36217936 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | AATCAAGTTTTATATTGATC+AGG | - | chr4_3:36217988-36218007 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | ATCAAGTTTTATATTGATCA+GGG | - | chr4_3:36217989-36218008 | Msa0639640:three_prime_UTR | 20.0% |
| !!! | TTTAAAATTGACCTTATCTT+TGG | - | chr4_3:36218876-36218895 | Msa0639640:CDS | 20.0% |
| !! | TTAAAATTGACCTTATCTTT+GGG | - | chr4_3:36218877-36218896 | Msa0639640:CDS | 20.0% |
| !! | TAAAGATATTGAAGAATTGT+AGG | - | chr4_3:36218944-36218963 | Msa0639640:CDS | 20.0% |
| !! | TTCAAATTATGATACACAAA+AGG | + | chr4_3:36219319-36219338 | None:intergenic | 20.0% |
| !!! | AGTTAAATGAATTTTAGAAG+AGG | + | chr4_3:36219514-36219533 | None:intergenic | 20.0% |
| !! | TTGCTCAATTTTGCAAATAA+AGG | - | chr4_3:36217871-36217890 | Msa0639640:three_prime_UTR | 25.0% |
| !! | TGCTCAATTTTGCAAATAAA+GGG | - | chr4_3:36217872-36217891 | Msa0639640:three_prime_UTR | 25.0% |
| ! | TGTTTGGACAAATTGAAATA+TGG | - | chr4_3:36218038-36218057 | Msa0639640:three_prime_UTR | 25.0% |
| ! | TTAAAAGTAAAGTGGAATCA+GGG | + | chr4_3:36218198-36218217 | None:intergenic | 25.0% |
| ! | CATTACTCTTAAAAGTAAAG+TGG | + | chr4_3:36218206-36218225 | None:intergenic | 25.0% |
| ! | TTTCACTAATAAAGTTAGCA+GGG | + | chr4_3:36218384-36218403 | None:intergenic | 25.0% |
| ! | ATTTCACTAATAAAGTTAGC+AGG | + | chr4_3:36218385-36218404 | None:intergenic | 25.0% |
| !! | ATAAAAGAAGGCACAAAAAA+TGG | - | chr4_3:36218406-36218425 | Msa0639640:CDS | 25.0% |
| !! | TCATGAACAATTTGAAATGA+CGG | - | chr4_3:36218453-36218472 | Msa0639640:CDS | 25.0% |
| ! | GTTTAACCAAATTAAGTCTT+TGG | - | chr4_3:36218570-36218589 | Msa0639640:intron | 25.0% |
| ! | TTTCAAATTTATTGCGCATT+TGG | - | chr4_3:36218804-36218823 | Msa0639640:CDS | 25.0% |
| ! | TCTTCAATATCTTTATGCAA+TGG | + | chr4_3:36218939-36218958 | None:intergenic | 25.0% |
| !!! | GAATTTTAGAAGAGGAAAAA+GGG | + | chr4_3:36219506-36219525 | None:intergenic | 25.0% |
| !!! | TGAATTTTAGAAGAGGAAAA+AGG | + | chr4_3:36219507-36219526 | None:intergenic | 25.0% |
| ! | AAATTAAAGAAATTGGGTCA+TGG | - | chr4_3:36219553-36219572 | Msa0639640:five_prime_UTR | 25.0% |
| ! | AATTAAAGAAATTGGGTCAT+GGG | - | chr4_3:36219554-36219573 | Msa0639640:five_prime_UTR | 25.0% |
| !! | TTGCTCAATTTTGCAAATAA+AGG | - | chr4_3:36217871-36217890 | Msa0639640:three_prime_UTR | 25.0% |
| !! | TGCTCAATTTTGCAAATAAA+GGG | - | chr4_3:36217872-36217891 | Msa0639640:three_prime_UTR | 25.0% |
| ! | TGTTTGGACAAATTGAAATA+TGG | - | chr4_3:36218038-36218057 | Msa0639640:three_prime_UTR | 25.0% |
| ! | TTAAAAGTAAAGTGGAATCA+GGG | + | chr4_3:36218198-36218217 | None:intergenic | 25.0% |
| ! | CATTACTCTTAAAAGTAAAG+TGG | + | chr4_3:36218206-36218225 | None:intergenic | 25.0% |
| ! | TTTCACTAATAAAGTTAGCA+GGG | + | chr4_3:36218384-36218403 | None:intergenic | 25.0% |
| ! | ATTTCACTAATAAAGTTAGC+AGG | + | chr4_3:36218385-36218404 | None:intergenic | 25.0% |
| !! | ATAAAAGAAGGCACAAAAAA+TGG | - | chr4_3:36218406-36218425 | Msa0639640:CDS | 25.0% |
| !! | TCATGAACAATTTGAAATGA+CGG | - | chr4_3:36218453-36218472 | Msa0639640:CDS | 25.0% |
| ! | GTTTAACCAAATTAAGTCTT+TGG | - | chr4_3:36218570-36218589 | Msa0639640:intron | 25.0% |
| ! | TTTCAAATTTATTGCGCATT+TGG | - | chr4_3:36218804-36218823 | Msa0639640:CDS | 25.0% |
| ! | TCTTCAATATCTTTATGCAA+TGG | + | chr4_3:36218939-36218958 | None:intergenic | 25.0% |
| !!! | GAATTTTAGAAGAGGAAAAA+GGG | + | chr4_3:36219506-36219525 | None:intergenic | 25.0% |
| !!! | TGAATTTTAGAAGAGGAAAA+AGG | + | chr4_3:36219507-36219526 | None:intergenic | 25.0% |
| ! | AAATTAAAGAAATTGGGTCA+TGG | - | chr4_3:36219553-36219572 | Msa0639640:five_prime_UTR | 25.0% |
| ! | AATTAAAGAAATTGGGTCAT+GGG | - | chr4_3:36219554-36219573 | Msa0639640:five_prime_UTR | 25.0% |
| ! | GCTCAATTTTGCAAATAAAG+GGG | - | chr4_3:36217873-36217892 | Msa0639640:three_prime_UTR | 30.0% |
| GAAGAAGAAGAATCATTGTT+TGG | - | chr4_3:36218022-36218041 | Msa0639640:three_prime_UTR | 30.0% | |
| ! | ACAATTTGAGTTAAGGATAG+TGG | + | chr4_3:36218151-36218170 | None:intergenic | 30.0% |
| ! | ATTCTGCACAATTTGAGTTA+AGG | + | chr4_3:36218158-36218177 | None:intergenic | 30.0% |
| TAAAAGTAAAGTGGAATCAG+GGG | + | chr4_3:36218197-36218216 | None:intergenic | 30.0% | |
| CTTAAAAGTAAAGTGGAATC+AGG | + | chr4_3:36218199-36218218 | None:intergenic | 30.0% | |
| TTTAAGAGTAATGAGAGTGA+TGG | - | chr4_3:36218213-36218232 | Msa0639640:CDS | 30.0% | |
| !!! | ATGTCATTTTTGTGTCTTGT+AGG | + | chr4_3:36218318-36218337 | None:intergenic | 30.0% |
| ACAAGACACAAAAATGACAT+TGG | - | chr4_3:36218318-36218337 | Msa0639640:CDS | 30.0% | |
| ! | CATGAACAATTTGAAATGAC+GGG | - | chr4_3:36218454-36218473 | Msa0639640:CDS | 30.0% |
| ! | ATGAACAATTTGAAATGACG+GGG | - | chr4_3:36218455-36218474 | Msa0639640:CDS | 30.0% |
| CATCAACCAAAGACTTAATT+TGG | + | chr4_3:36218579-36218598 | None:intergenic | 30.0% | |
| ! | ATTAAGTCTTTGGTTGATGT+TGG | - | chr4_3:36218580-36218599 | Msa0639640:intron | 30.0% |
| AAGTTAATAGCTTGAATGTG+AGG | + | chr4_3:36218649-36218668 | None:intergenic | 30.0% | |
| GATATTGAAGAATTGTAGGA+AGG | - | chr4_3:36218948-36218967 | Msa0639640:CDS | 30.0% | |
| TAAATGGTTCATTTCCTTCT+GGG | + | chr4_3:36219023-36219042 | None:intergenic | 30.0% | |
| AAATACTTATTCAACGAGAC+AGG | - | chr4_3:36219120-36219139 | Msa0639640:CDS | 30.0% | |
| !!! | TTTTGATGATGTTGTAACGA+GGG | + | chr4_3:36219149-36219168 | None:intergenic | 30.0% |
| !!! | ATTTTGATGATGTTGTAACG+AGG | + | chr4_3:36219150-36219169 | None:intergenic | 30.0% |
| ATCTTCCATGAATTTAGACT+GGG | + | chr4_3:36219203-36219222 | None:intergenic | 30.0% | |
| !!! | ACTTGGAGTTTTGTTATCTA+AGG | - | chr4_3:36219285-36219304 | Msa0639640:CDS | 30.0% |
| ! | GCTCAATTTTGCAAATAAAG+GGG | - | chr4_3:36217873-36217892 | Msa0639640:three_prime_UTR | 30.0% |
| GAAGAAGAAGAATCATTGTT+TGG | - | chr4_3:36218022-36218041 | Msa0639640:three_prime_UTR | 30.0% | |
| ! | ACAATTTGAGTTAAGGATAG+TGG | + | chr4_3:36218151-36218170 | None:intergenic | 30.0% |
| ! | ATTCTGCACAATTTGAGTTA+AGG | + | chr4_3:36218158-36218177 | None:intergenic | 30.0% |
| TAAAAGTAAAGTGGAATCAG+GGG | + | chr4_3:36218197-36218216 | None:intergenic | 30.0% | |
| CTTAAAAGTAAAGTGGAATC+AGG | + | chr4_3:36218199-36218218 | None:intergenic | 30.0% | |
| TTTAAGAGTAATGAGAGTGA+TGG | - | chr4_3:36218213-36218232 | Msa0639640:CDS | 30.0% | |
| !!! | ATGTCATTTTTGTGTCTTGT+AGG | + | chr4_3:36218318-36218337 | None:intergenic | 30.0% |
| ACAAGACACAAAAATGACAT+TGG | - | chr4_3:36218318-36218337 | Msa0639640:CDS | 30.0% | |
| ! | CATGAACAATTTGAAATGAC+GGG | - | chr4_3:36218454-36218473 | Msa0639640:CDS | 30.0% |
| ! | ATGAACAATTTGAAATGACG+GGG | - | chr4_3:36218455-36218474 | Msa0639640:CDS | 30.0% |
| CATCAACCAAAGACTTAATT+TGG | + | chr4_3:36218579-36218598 | None:intergenic | 30.0% | |
| ! | ATTAAGTCTTTGGTTGATGT+TGG | - | chr4_3:36218580-36218599 | Msa0639640:intron | 30.0% |
| AAGTTAATAGCTTGAATGTG+AGG | + | chr4_3:36218649-36218668 | None:intergenic | 30.0% | |
| GATATTGAAGAATTGTAGGA+AGG | - | chr4_3:36218948-36218967 | Msa0639640:CDS | 30.0% | |
| TAAATGGTTCATTTCCTTCT+GGG | + | chr4_3:36219023-36219042 | None:intergenic | 30.0% | |
| AAATACTTATTCAACGAGAC+AGG | - | chr4_3:36219120-36219139 | Msa0639640:CDS | 30.0% | |
| !!! | TTTTGATGATGTTGTAACGA+GGG | + | chr4_3:36219149-36219168 | None:intergenic | 30.0% |
| !!! | ATTTTGATGATGTTGTAACG+AGG | + | chr4_3:36219150-36219169 | None:intergenic | 30.0% |
| ATCTTCCATGAATTTAGACT+GGG | + | chr4_3:36219203-36219222 | None:intergenic | 30.0% | |
| !!! | ACTTGGAGTTTTGTTATCTA+AGG | - | chr4_3:36219285-36219304 | Msa0639640:CDS | 30.0% |
| !!! | TTTTGCTCTAAAAGCTGTTG+TGG | - | chr4_3:36218087-36218106 | Msa0639640:three_prime_UTR | 35.0% |
| AGTGCAGAAAAATCAGAAAC+CGG | - | chr4_3:36218253-36218272 | Msa0639640:CDS | 35.0% | |
| TGATTCTCTAGCAACAACAT+TGG | + | chr4_3:36218346-36218365 | None:intergenic | 35.0% | |
| TAGCAGGGTTCAAATGAAAA+GGG | + | chr4_3:36218369-36218388 | None:intergenic | 35.0% | |
| TTAGCAGGGTTCAAATGAAA+AGG | + | chr4_3:36218370-36218389 | None:intergenic | 35.0% | |
| AAAATGGCACTGCTTTCTTT+AGG | - | chr4_3:36218422-36218441 | Msa0639640:CDS | 35.0% | |
| !! | TACAATGACTTGTTCAACCA+AGG | - | chr4_3:36218490-36218509 | Msa0639640:intron | 35.0% |
| GTTATTGCTGGATACAAAGA+CGG | - | chr4_3:36218547-36218566 | Msa0639640:intron | 35.0% | |
| TTATTGCTGGATACAAAGAC+GGG | - | chr4_3:36218548-36218567 | Msa0639640:intron | 35.0% | |
| ! | AGGATAAGCTCTAACAATCT+CGG | + | chr4_3:36218629-36218648 | None:intergenic | 35.0% |
| !! | TAACTTTGATTTGCCTCATG+TGG | - | chr4_3:36218663-36218682 | Msa0639640:CDS | 35.0% |
| GGTGATACCATCAAAATTAG+GGG | + | chr4_3:36218698-36218717 | None:intergenic | 35.0% | |
| GGGTGATACCATCAAAATTA+GGG | + | chr4_3:36218699-36218718 | None:intergenic | 35.0% | |
| TGGGTGATACCATCAAAATT+AGG | + | chr4_3:36218700-36218719 | None:intergenic | 35.0% | |
| AATACCAGAGAAAACAGGAA+AGG | - | chr4_3:36218972-36218991 | Msa0639640:CDS | 35.0% | |
| GATCATTGTGGATCATGTAT+TGG | - | chr4_3:36218996-36219015 | Msa0639640:CDS | 35.0% | |
| GTAAATGGTTCATTTCCTTC+TGG | + | chr4_3:36219024-36219043 | None:intergenic | 35.0% | |
| AAGAAAGAACTGAAGAGAAC+TGG | - | chr4_3:36219097-36219116 | Msa0639640:CDS | 35.0% | |
| CATCTTCCATGAATTTAGAC+TGG | + | chr4_3:36219204-36219223 | None:intergenic | 35.0% | |
| ATGGAAGATGATGAGTTTGT+TGG | - | chr4_3:36219214-36219233 | Msa0639640:CDS | 35.0% | |
| AGGAAAAAGGGAAGAAAATG+TGG | + | chr4_3:36219494-36219513 | None:intergenic | 35.0% | |
| !!! | TTTTGCTCTAAAAGCTGTTG+TGG | - | chr4_3:36218087-36218106 | Msa0639640:three_prime_UTR | 35.0% |
| AGTGCAGAAAAATCAGAAAC+CGG | - | chr4_3:36218253-36218272 | Msa0639640:CDS | 35.0% | |
| TGATTCTCTAGCAACAACAT+TGG | + | chr4_3:36218346-36218365 | None:intergenic | 35.0% | |
| TAGCAGGGTTCAAATGAAAA+GGG | + | chr4_3:36218369-36218388 | None:intergenic | 35.0% | |
| TTAGCAGGGTTCAAATGAAA+AGG | + | chr4_3:36218370-36218389 | None:intergenic | 35.0% | |
| AAAATGGCACTGCTTTCTTT+AGG | - | chr4_3:36218422-36218441 | Msa0639640:CDS | 35.0% | |
| !! | TACAATGACTTGTTCAACCA+AGG | - | chr4_3:36218490-36218509 | Msa0639640:intron | 35.0% |
| GTTATTGCTGGATACAAAGA+CGG | - | chr4_3:36218547-36218566 | Msa0639640:intron | 35.0% | |
| TTATTGCTGGATACAAAGAC+GGG | - | chr4_3:36218548-36218567 | Msa0639640:intron | 35.0% | |
| ! | AGGATAAGCTCTAACAATCT+CGG | + | chr4_3:36218629-36218648 | None:intergenic | 35.0% |
| !! | TAACTTTGATTTGCCTCATG+TGG | - | chr4_3:36218663-36218682 | Msa0639640:CDS | 35.0% |
| GGTGATACCATCAAAATTAG+GGG | + | chr4_3:36218698-36218717 | None:intergenic | 35.0% | |
| GGGTGATACCATCAAAATTA+GGG | + | chr4_3:36218699-36218718 | None:intergenic | 35.0% | |
| TGGGTGATACCATCAAAATT+AGG | + | chr4_3:36218700-36218719 | None:intergenic | 35.0% | |
| AATACCAGAGAAAACAGGAA+AGG | - | chr4_3:36218972-36218991 | Msa0639640:CDS | 35.0% | |
| GATCATTGTGGATCATGTAT+TGG | - | chr4_3:36218996-36219015 | Msa0639640:CDS | 35.0% | |
| GTAAATGGTTCATTTCCTTC+TGG | + | chr4_3:36219024-36219043 | None:intergenic | 35.0% | |
| AAGAAAGAACTGAAGAGAAC+TGG | - | chr4_3:36219097-36219116 | Msa0639640:CDS | 35.0% | |
| CATCTTCCATGAATTTAGAC+TGG | + | chr4_3:36219204-36219223 | None:intergenic | 35.0% | |
| ATGGAAGATGATGAGTTTGT+TGG | - | chr4_3:36219214-36219233 | Msa0639640:CDS | 35.0% | |
| AGGAAAAAGGGAAGAAAATG+TGG | + | chr4_3:36219494-36219513 | None:intergenic | 35.0% | |
| AAAGGGGAATACTCAGTGTT+TGG | - | chr4_3:36217889-36217908 | Msa0639640:three_prime_UTR | 40.0% | |
| GCCATAACGGTCTATAATGT+CGG | + | chr4_3:36218125-36218144 | None:intergenic | 40.0% | |
| ! | AGGATAGTGGTTTGCCATAA+CGG | + | chr4_3:36218138-36218157 | None:intergenic | 40.0% |
| GAAACCGGTGAAATTCTCTA+CGG | - | chr4_3:36218268-36218287 | Msa0639640:CDS | 40.0% | |
| ACTGCTTTCTTTAGGTGTCA+TGG | - | chr4_3:36218430-36218449 | Msa0639640:CDS | 40.0% | |
| ! | ACAATTTGAAATGACGGGGT+TGG | - | chr4_3:36218459-36218478 | Msa0639640:CDS | 40.0% |
| !! | TGACTTGTTCAACCAAGGTA+TGG | - | chr4_3:36218495-36218514 | Msa0639640:intron | 40.0% |
| ! | AAGTCTTTGGTTGATGTTGG+CGG | - | chr4_3:36218583-36218602 | Msa0639640:intron | 40.0% |
| GATACCATCAAAATTAGGGG+CGG | + | chr4_3:36218695-36218714 | None:intergenic | 40.0% | |
| ! | TTTGATGGTATCACCCATGT+TGG | - | chr4_3:36218703-36218722 | Msa0639640:CDS | 40.0% |
| AAACATGTCTCCTCCAACAT+GGG | + | chr4_3:36218719-36218738 | None:intergenic | 40.0% | |
| ATGTAAATAGCATCAGCGCT+AGG | + | chr4_3:36218751-36218770 | None:intergenic | 40.0% | |
| ! | CGCTGATGCTATTTACATGA+AGG | - | chr4_3:36218753-36218772 | Msa0639640:CDS | 40.0% |
| TGACCTTATCTTTGGGTGAA+TGG | - | chr4_3:36218884-36218903 | Msa0639640:CDS | 40.0% | |
| AAGGCAATACCAGAGAAAAC+AGG | - | chr4_3:36218967-36218986 | Msa0639640:CDS | 40.0% | |
| ! | ATCACCTTTCCTGTTTTCTC+TGG | + | chr4_3:36218979-36218998 | None:intergenic | 40.0% |
| AACAGGAAAGGTGATCATTG+TGG | - | chr4_3:36218984-36219003 | Msa0639640:CDS | 40.0% | |
| AATGAACCATTTACCGACAC+TGG | - | chr4_3:36219030-36219049 | Msa0639640:CDS | 40.0% | |
| ATGAACCATTTACCGACACT+GGG | - | chr4_3:36219031-36219050 | Msa0639640:CDS | 40.0% | |
| GCATTCCCAGTCTAAATTCA+TGG | - | chr4_3:36219195-36219214 | Msa0639640:CDS | 40.0% | |
| TTCGTATGTGTTGTGTTGTG+TGG | - | chr4_3:36219258-36219277 | Msa0639640:CDS | 40.0% | |
| ! | TTGTGTTGTGTGGCTTTACT+TGG | - | chr4_3:36219268-36219287 | Msa0639640:CDS | 40.0% |
| ! | CATGAATCATAGCTAGCTCT+AGG | + | chr4_3:36219360-36219379 | None:intergenic | 40.0% |
| AGCTAGCTATGATTCATGCA+TGG | - | chr4_3:36219362-36219381 | Msa0639640:five_prime_UTR | 40.0% | |
| GCTAGCTATGATTCATGCAT+GGG | - | chr4_3:36219363-36219382 | Msa0639640:five_prime_UTR | 40.0% | |
| CTAGCTATGATTCATGCATG+GGG | - | chr4_3:36219364-36219383 | Msa0639640:five_prime_UTR | 40.0% | |
| TAGCTATGATTCATGCATGG+GGG | - | chr4_3:36219365-36219384 | Msa0639640:five_prime_UTR | 40.0% | |
| AAAGGGGAATACTCAGTGTT+TGG | - | chr4_3:36217889-36217908 | Msa0639640:three_prime_UTR | 40.0% | |
| GCCATAACGGTCTATAATGT+CGG | + | chr4_3:36218125-36218144 | None:intergenic | 40.0% | |
| ! | AGGATAGTGGTTTGCCATAA+CGG | + | chr4_3:36218138-36218157 | None:intergenic | 40.0% |
| GAAACCGGTGAAATTCTCTA+CGG | - | chr4_3:36218268-36218287 | Msa0639640:CDS | 40.0% | |
| ACTGCTTTCTTTAGGTGTCA+TGG | - | chr4_3:36218430-36218449 | Msa0639640:CDS | 40.0% | |
| ! | ACAATTTGAAATGACGGGGT+TGG | - | chr4_3:36218459-36218478 | Msa0639640:CDS | 40.0% |
| !! | TGACTTGTTCAACCAAGGTA+TGG | - | chr4_3:36218495-36218514 | Msa0639640:intron | 40.0% |
| ! | AAGTCTTTGGTTGATGTTGG+CGG | - | chr4_3:36218583-36218602 | Msa0639640:intron | 40.0% |
| GATACCATCAAAATTAGGGG+CGG | + | chr4_3:36218695-36218714 | None:intergenic | 40.0% | |
| ! | TTTGATGGTATCACCCATGT+TGG | - | chr4_3:36218703-36218722 | Msa0639640:CDS | 40.0% |
| AAACATGTCTCCTCCAACAT+GGG | + | chr4_3:36218719-36218738 | None:intergenic | 40.0% | |
| ATGTAAATAGCATCAGCGCT+AGG | + | chr4_3:36218751-36218770 | None:intergenic | 40.0% | |
| ! | CGCTGATGCTATTTACATGA+AGG | - | chr4_3:36218753-36218772 | Msa0639640:CDS | 40.0% |
| TGACCTTATCTTTGGGTGAA+TGG | - | chr4_3:36218884-36218903 | Msa0639640:CDS | 40.0% | |
| AAGGCAATACCAGAGAAAAC+AGG | - | chr4_3:36218967-36218986 | Msa0639640:CDS | 40.0% | |
| ! | ATCACCTTTCCTGTTTTCTC+TGG | + | chr4_3:36218979-36218998 | None:intergenic | 40.0% |
| AACAGGAAAGGTGATCATTG+TGG | - | chr4_3:36218984-36219003 | Msa0639640:CDS | 40.0% | |
| AATGAACCATTTACCGACAC+TGG | - | chr4_3:36219030-36219049 | Msa0639640:CDS | 40.0% | |
| ATGAACCATTTACCGACACT+GGG | - | chr4_3:36219031-36219050 | Msa0639640:CDS | 40.0% | |
| GCATTCCCAGTCTAAATTCA+TGG | - | chr4_3:36219195-36219214 | Msa0639640:CDS | 40.0% | |
| TTCGTATGTGTTGTGTTGTG+TGG | - | chr4_3:36219258-36219277 | Msa0639640:CDS | 40.0% | |
| ! | TTGTGTTGTGTGGCTTTACT+TGG | - | chr4_3:36219268-36219287 | Msa0639640:CDS | 40.0% |
| ! | CATGAATCATAGCTAGCTCT+AGG | + | chr4_3:36219360-36219379 | None:intergenic | 40.0% |
| AGCTAGCTATGATTCATGCA+TGG | - | chr4_3:36219362-36219381 | Msa0639640:five_prime_UTR | 40.0% | |
| GCTAGCTATGATTCATGCAT+GGG | - | chr4_3:36219363-36219382 | Msa0639640:five_prime_UTR | 40.0% | |
| CTAGCTATGATTCATGCATG+GGG | - | chr4_3:36219364-36219383 | Msa0639640:five_prime_UTR | 40.0% | |
| TAGCTATGATTCATGCATGG+GGG | - | chr4_3:36219365-36219384 | Msa0639640:five_prime_UTR | 40.0% | |
| TATTGATCAGGGTGTGAGCA+AGG | - | chr4_3:36218000-36218019 | Msa0639640:three_prime_UTR | 45.0% | |
| GCCGACATTATAGACCGTTA+TGG | - | chr4_3:36218121-36218140 | Msa0639640:three_prime_UTR | 45.0% | |
| AGTAAAGTGGAATCAGGGGA+GGG | + | chr4_3:36218193-36218212 | None:intergenic | 45.0% | |
| AAGTAAAGTGGAATCAGGGG+AGG | + | chr4_3:36218194-36218213 | None:intergenic | 45.0% | |
| CAAGCCGTAGAGAATTTCAC+CGG | + | chr4_3:36218275-36218294 | None:intergenic | 45.0% | |
| GCTTGACACGTGCATCAAAA+TGG | - | chr4_3:36218290-36218309 | Msa0639640:CDS | 45.0% | |
| ! | AGTCTTTGGTTGATGTTGGC+GGG | - | chr4_3:36218584-36218603 | Msa0639640:intron | 45.0% |
| ! | TCAACCGCCCCTAATTTTGA+TGG | - | chr4_3:36218688-36218707 | Msa0639640:CDS | 45.0% |
| CAAACATGTCTCCTCCAACA+TGG | + | chr4_3:36218720-36218739 | None:intergenic | 45.0% | |
| AATAGCATCAGCGCTAGGAA+CGG | + | chr4_3:36218746-36218765 | None:intergenic | 45.0% | |
| CTGCCATTCACCCAAAGATA+AGG | + | chr4_3:36218890-36218909 | None:intergenic | 45.0% | |
| TATCTTTGGGTGAATGGCAG+TGG | - | chr4_3:36218890-36218909 | Msa0639640:CDS | 45.0% | |
| GATCATGTATTGGACCCAGA+AGG | - | chr4_3:36219006-36219025 | Msa0639640:CDS | 45.0% | |
| GTCAAATGCTATCCCAGTGT+CGG | + | chr4_3:36219046-36219065 | None:intergenic | 45.0% | |
| !! | GAATCATAGCTAGCTCTAGG+TGG | + | chr4_3:36219357-36219376 | None:intergenic | 45.0% |
| AGCTATGATTCATGCATGGG+GGG | - | chr4_3:36219366-36219385 | Msa0639640:five_prime_UTR | 45.0% | |
| CTGCTATCTGATCTGCTGAT+GGG | + | chr4_3:36219403-36219422 | None:intergenic | 45.0% | |
| TCTGCTATCTGATCTGCTGA+TGG | + | chr4_3:36219404-36219423 | None:intergenic | 45.0% | |
| TATTGATCAGGGTGTGAGCA+AGG | - | chr4_3:36218000-36218019 | Msa0639640:three_prime_UTR | 45.0% | |
| GCCGACATTATAGACCGTTA+TGG | - | chr4_3:36218121-36218140 | Msa0639640:three_prime_UTR | 45.0% | |
| AGTAAAGTGGAATCAGGGGA+GGG | + | chr4_3:36218193-36218212 | None:intergenic | 45.0% | |
| AAGTAAAGTGGAATCAGGGG+AGG | + | chr4_3:36218194-36218213 | None:intergenic | 45.0% | |
| CAAGCCGTAGAGAATTTCAC+CGG | + | chr4_3:36218275-36218294 | None:intergenic | 45.0% | |
| GCTTGACACGTGCATCAAAA+TGG | - | chr4_3:36218290-36218309 | Msa0639640:CDS | 45.0% | |
| ! | AGTCTTTGGTTGATGTTGGC+GGG | - | chr4_3:36218584-36218603 | Msa0639640:intron | 45.0% |
| ! | TCAACCGCCCCTAATTTTGA+TGG | - | chr4_3:36218688-36218707 | Msa0639640:CDS | 45.0% |
| CAAACATGTCTCCTCCAACA+TGG | + | chr4_3:36218720-36218739 | None:intergenic | 45.0% | |
| AATAGCATCAGCGCTAGGAA+CGG | + | chr4_3:36218746-36218765 | None:intergenic | 45.0% | |
| CTGCCATTCACCCAAAGATA+AGG | + | chr4_3:36218890-36218909 | None:intergenic | 45.0% | |
| TATCTTTGGGTGAATGGCAG+TGG | - | chr4_3:36218890-36218909 | Msa0639640:CDS | 45.0% | |
| GATCATGTATTGGACCCAGA+AGG | - | chr4_3:36219006-36219025 | Msa0639640:CDS | 45.0% | |
| GTCAAATGCTATCCCAGTGT+CGG | + | chr4_3:36219046-36219065 | None:intergenic | 45.0% | |
| !! | GAATCATAGCTAGCTCTAGG+TGG | + | chr4_3:36219357-36219376 | None:intergenic | 45.0% |
| AGCTATGATTCATGCATGGG+GGG | - | chr4_3:36219366-36219385 | Msa0639640:five_prime_UTR | 45.0% | |
| CTGCTATCTGATCTGCTGAT+GGG | + | chr4_3:36219403-36219422 | None:intergenic | 45.0% | |
| TCTGCTATCTGATCTGCTGA+TGG | + | chr4_3:36219404-36219423 | None:intergenic | 45.0% | |
| !! | AATATAAAATTAAAGAAATT+GGG | - | chr4_3:36219547-36219566 | Msa0639640:five_prime_UTR | 5.0% |
| !! | AATATAAAATTAAAGAAATT+GGG | - | chr4_3:36219547-36219566 | Msa0639640:five_prime_UTR | 5.0% |
| TAGCGGTGCAAACCATACCT+TGG | + | chr4_3:36218510-36218529 | None:intergenic | 50.0% | |
| CACCGCTAGAATTGTGTCGA+GGG | - | chr4_3:36218522-36218541 | Msa0639640:intron | 50.0% | |
| AGCCCTCGACACAATTCTAG+CGG | + | chr4_3:36218527-36218546 | None:intergenic | 50.0% | |
| ! | GTCTTTGGTTGATGTTGGCG+GGG | - | chr4_3:36218585-36218604 | Msa0639640:intron | 50.0% |
| ! | TCTTTGGTTGATGTTGGCGG+GGG | - | chr4_3:36218586-36218605 | Msa0639640:intron | 50.0% |
| GATGGTATCACCCATGTTGG+AGG | - | chr4_3:36218706-36218725 | Msa0639640:CDS | 50.0% | |
| ! | GGCAGTGGATTCTTCATGAC+TGG | - | chr4_3:36218905-36218924 | Msa0639640:CDS | 50.0% |
| !! | GCTATCCCAGTGTCGGTAAA+TGG | + | chr4_3:36219039-36219058 | None:intergenic | 50.0% |
| ! | ATGTTGCTTGCTCACAACGC+TGG | - | chr4_3:36219069-36219088 | Msa0639640:CDS | 50.0% |
| TGCTCTGCCATGCATCATTG+AGG | - | chr4_3:36219173-36219192 | Msa0639640:CDS | 50.0% | |
| GGGAATGCCTCAATGATGCA+TGG | + | chr4_3:36219183-36219202 | None:intergenic | 50.0% | |
| TATGATTCATGCATGGGGGG+AGG | - | chr4_3:36219369-36219388 | Msa0639640:five_prime_UTR | 50.0% | |
| TAGCGGTGCAAACCATACCT+TGG | + | chr4_3:36218510-36218529 | None:intergenic | 50.0% | |
| CACCGCTAGAATTGTGTCGA+GGG | - | chr4_3:36218522-36218541 | Msa0639640:intron | 50.0% | |
| AGCCCTCGACACAATTCTAG+CGG | + | chr4_3:36218527-36218546 | None:intergenic | 50.0% | |
| ! | GTCTTTGGTTGATGTTGGCG+GGG | - | chr4_3:36218585-36218604 | Msa0639640:intron | 50.0% |
| ! | TCTTTGGTTGATGTTGGCGG+GGG | - | chr4_3:36218586-36218605 | Msa0639640:intron | 50.0% |
| GATGGTATCACCCATGTTGG+AGG | - | chr4_3:36218706-36218725 | Msa0639640:CDS | 50.0% | |
| ! | GGCAGTGGATTCTTCATGAC+TGG | - | chr4_3:36218905-36218924 | Msa0639640:CDS | 50.0% |
| !! | GCTATCCCAGTGTCGGTAAA+TGG | + | chr4_3:36219039-36219058 | None:intergenic | 50.0% |
| ! | ATGTTGCTTGCTCACAACGC+TGG | - | chr4_3:36219069-36219088 | Msa0639640:CDS | 50.0% |
| TGCTCTGCCATGCATCATTG+AGG | - | chr4_3:36219173-36219192 | Msa0639640:CDS | 50.0% | |
| GGGAATGCCTCAATGATGCA+TGG | + | chr4_3:36219183-36219202 | None:intergenic | 50.0% | |
| TATGATTCATGCATGGGGGG+AGG | - | chr4_3:36219369-36219388 | Msa0639640:five_prime_UTR | 50.0% | |
| GCACCGCTAGAATTGTGTCG+AGG | - | chr4_3:36218521-36218540 | Msa0639640:intron | 55.0% | |
| GTGTCGAGGGCTGTTATTGC+TGG | - | chr4_3:36218535-36218554 | Msa0639640:intron | 55.0% | |
| ! | GTTGATGTTGGCGGGGGTAT+CGG | - | chr4_3:36218592-36218611 | Msa0639640:intron | 55.0% |
| TTGCTTGCTCACAACGCTGG+TGG | - | chr4_3:36219072-36219091 | Msa0639640:CDS | 55.0% | |
| GCACCGCTAGAATTGTGTCG+AGG | - | chr4_3:36218521-36218540 | Msa0639640:intron | 55.0% | |
| GTGTCGAGGGCTGTTATTGC+TGG | - | chr4_3:36218535-36218554 | Msa0639640:intron | 55.0% | |
| ! | GTTGATGTTGGCGGGGGTAT+CGG | - | chr4_3:36218592-36218611 | Msa0639640:intron | 55.0% |
| TTGCTTGCTCACAACGCTGG+TGG | - | chr4_3:36219072-36219091 | Msa0639640:CDS | 55.0% | |
| GGGGCGGTTGAAACCACATG+AGG | + | chr4_3:36218679-36218698 | None:intergenic | 60.0% | |
| ! | CATGCATGGGGGGAGGCTTT+TGG | - | chr4_3:36219376-36219395 | Msa0639640:five_prime_UTR | 60.0% |
| GGGGCGGTTGAAACCACATG+AGG | + | chr4_3:36218679-36218698 | None:intergenic | 60.0% | |
| ! | CATGCATGGGGGGAGGCTTT+TGG | - | chr4_3:36219376-36219395 | Msa0639640:five_prime_UTR | 60.0% |
| !! | GATGTTGGCGGGGGTATCGG+AGG | - | chr4_3:36218595-36218614 | Msa0639640:intron | 65.0% |
| !! | GATGTTGGCGGGGGTATCGG+AGG | - | chr4_3:36218595-36218614 | Msa0639640:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 36217835 | 36219577 | 36217835 | ID=Msa0639640;Name=Msa0639640 |
| chr4_3 | mRNA | 36217835 | 36219577 | 36217835 | ID=Msa0639640-mRNA-1;Parent=Msa0639640;Name=Msa0639640-mRNA-1;_AED=0.04;_eAED=0.04;_QI=232|1|1|1|1|1|2|368|335 |
| chr4_3 | exon | 36217835 | 36218502 | 36217835 | ID=Msa0639640-mRNA-1:exon:8382;Parent=Msa0639640-mRNA-1 |
| chr4_3 | exon | 36218638 | 36219577 | 36218638 | ID=Msa0639640-mRNA-1:exon:8381;Parent=Msa0639640-mRNA-1 |
| chr4_3 | five_prime_UTR | 36219346 | 36219577 | 36219346 | ID=Msa0639640-mRNA-1:five_prime_utr;Parent=Msa0639640-mRNA-1 |
| chr4_3 | CDS | 36218638 | 36219345 | 36218638 | ID=Msa0639640-mRNA-1:cds;Parent=Msa0639640-mRNA-1 |
| chr4_3 | CDS | 36218203 | 36218502 | 36218203 | ID=Msa0639640-mRNA-1:cds;Parent=Msa0639640-mRNA-1 |
| chr4_3 | three_prime_UTR | 36217835 | 36218202 | 36217835 | ID=Msa0639640-mRNA-1:three_prime_utr;Parent=Msa0639640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
