AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1245300


Find 320 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_2 gene 35258806 35269891 35258806 ID=Msa1245300;Name=Msa1245300
chr8_2 mRNA 35258806 35269891 35258806 ID=Msa1245300-mRNA-1;Parent=Msa1245300;Name=Msa1245300-mRNA-1;_AED=0.04;_eAED=0.04;_QI=170|1|1|1|0.9|0.81|11|472|1515
chr8_2 exon 35258806 35258940 35258806 ID=Msa1245300-mRNA-1:exon:11159;Parent=Msa1245300-mRNA-1
chr8_2 exon 35263044 35265457 35263044 ID=Msa1245300-mRNA-1:exon:11160;Parent=Msa1245300-mRNA-1
chr8_2 exon 35265570 35265656 35265570 ID=Msa1245300-mRNA-1:exon:11161;Parent=Msa1245300-mRNA-1
chr8_2 exon 35266002 35266658 35266002 ID=Msa1245300-mRNA-1:exon:11162;Parent=Msa1245300-mRNA-1
chr8_2 exon 35266747 35266911 35266747 ID=Msa1245300-mRNA-1:exon:11163;Parent=Msa1245300-mRNA-1
chr8_2 exon 35267205 35267499 35267205 ID=Msa1245300-mRNA-1:exon:11164;Parent=Msa1245300-mRNA-1
chr8_2 exon 35267639 35267853 35267639 ID=Msa1245300-mRNA-1:exon:11165;Parent=Msa1245300-mRNA-1
chr8_2 exon 35267957 35268262 35267957 ID=Msa1245300-mRNA-1:exon:11166;Parent=Msa1245300-mRNA-1
chr8_2 exon 35268617 35268680 35268617 ID=Msa1245300-mRNA-1:exon:11167;Parent=Msa1245300-mRNA-1
chr8_2 exon 35268773 35269012 35268773 ID=Msa1245300-mRNA-1:exon:11168;Parent=Msa1245300-mRNA-1
chr8_2 exon 35269280 35269891 35269280 ID=Msa1245300-mRNA-1:exon:11169;Parent=Msa1245300-mRNA-1
chr8_2 five_prime_UTR 35258806 35258940 35258806 ID=Msa1245300-mRNA-1:five_prime_utr;Parent=Msa1245300-mRNA-1
chr8_2 five_prime_UTR 35263044 35263078 35263044 ID=Msa1245300-mRNA-1:five_prime_utr;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35263079 35265457 35263079 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35265570 35265656 35265570 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35266002 35266658 35266002 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35266747 35266911 35266747 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35267205 35267499 35267205 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35267639 35267853 35267639 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35267957 35268262 35267957 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35268617 35268680 35268617 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35268773 35269012 35268773 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 CDS 35269280 35269419 35269280 ID=Msa1245300-mRNA-1:cds;Parent=Msa1245300-mRNA-1
chr8_2 three_prime_UTR 35269420 35269891 35269420 ID=Msa1245300-mRNA-1:three_prime_utr;Parent=Msa1245300-mRNA-1
Gene Sequence

>Msa1245300

ATGAATCTTCATGAGTTTAACATCGTTCTTCATTTGGCTTTGACAGAGCTGAGAAGTTTTTCATGGACTACATGGCAGCCATTAGTCTCACCATGCTTGTTGGAACATGTAACTTTACCTCTAGAATTTGGCTTTCTTGTGATATTGTTAGTCCAACTCCTAAGAAATTGCGTGAACAACATCACCAAGCAAAACAAGGTCTCACAAGTGCATCCAAATTGCATAAAATTTGGTTTTCCTTACATGATAAGCTTAGCTTGCACCACTTTATTCTTGGCTATTCATGCCTTAATGCTAATATTGATGCTCAATCATGAGCCTCAATGTACTTCAAAACTTCAAACTTTTACATCAGAGATCATTCAAGTGTTATCATCTGCAACTATTCTAATAGCAATATGCAAGATGTCAAAAACAAATGCTAATTTCCCGTGGATTATAAGGATTTGGTGGTTTTTCAGTTTCCTTTTGAGCATTATCAGCACAGCCCTTCATGTCCATTTCAGTATAAAAAATAAGGGTGTTATTGGTATAAAAGAATATGCAGATTTCCTTGGTTTGTTTGTTTCAACATGTCTGTTAGTTGTTTCAACAAGAGGGAAAACAGGCATAGTCATCATTGCAACAAATGGTAGCATATCTGAACCACTTTTGGAAGAGAAAAATGAGAAACATTCTTCTCAGTGTCTAAAAGAATCACCATATGGAAAAGCTACAATTTTTCAATTGATAAATTTCTCATGGCTCAATCCGTTGTTTGCGGTAGGGTATAAGAAACCTCTTCAATTGGATGACATTCCTAATCTTGACATCAAGGACTCTGCTGAATATCTAAATTGTGCATTTGATGAGAGTCTTAGACAAGTTAAGGAAAAAGATGGAACTACAAATCCATCTATCTACAAGGCAATCTATTTATTTGCTAGAAAGAAAGCGGCAATCAACGCGCTTTTCGCAATAATAAGCGCTTCAGCATCTTATGTTGGTCCATATTTGATCACTGACTTTGTGAATTTCCTCACCGAGAAGGACAGTCGCGGACTAAAGAGCGGATACCTTTTGTCTCTAGGTTTCTTATGTGCTAAAATGGTTGAGGTCATAGCTCAGAGGCAATGGATTTTCGGTGCTCGGCAACTAGGCCTCCGCCTAAGAGCCGCATTGATATCACACATATATAAGAAGGGCTTACATCTATCAAGCCGATCGCGTCAAAGTCATTCTGGTGGTGAGATAATGAACTACATGAGTGTAGATGTGCAGAGGATTACAGATTTCGTTTGGTATGTAAATGTTATTTGGATGCTGCCGATACAAATTTCCTTAGCTGTTATCGTTTTGCAGACAAATCTTGGATTAGGTTCATTGGCTGCATTAGCTGCTACACTAGCAGTTATGACTTTGAACATACCTTTAACGAAAATACAGAAAAGATACCAAACCAAGATCATGGATGCAAAAGACAACAGAATGAAGACCACTTCAGAAATTCTCAAAAACATGAGGACTTTGAAACTTCAAGCATGGGATAGTGAGTTTTTCCAAAGGATAGAATCATTGAGAAGTGTTGAATATGGATGGTTATCAAAGTCATTAAGACAACAGGCGTTTTCGGCTTTTATCTTCTGGGGTTCACCTACATTCATTTCAGTGATAACCTTTTGGACATGCATGTTCGTAGGGATTGAGCTGACAGCTGGAAGGGTCTTATCCGCATTTGCGACATTCCGAATGTTACAAGATCCTATCTTTAGTCTACCTGATCTACTCAATGTTATTGCTCAAGGAAAAGTTTCTGTCGATAGGATCGCTTCTTTTCTTAAGAAGGAAGAAATCCAACATGATGTAATTGAATATGTTTCCAAGGACAAAACAGAATTTGATGTAGTTATTGAGAAAGGAAGATTCAGTTGGGATCCTGAGACAACAATTCCAACACTTGATGAAATTGAGTTGAATGTTAAGAGAGGAATGAAGGTTGCAATTTGTGGTTCTGTTGGTTCCGGGAAATCTAGTATGCTCTCAGGAGTTTTGGGAGAGATATTTAAACAATCAGGGAATGTTAAGATTAGTGGTACAAAGGCTTATGTTCCACAATCAGCATGGATACTTACTGGAAATATTAGGGACAATATAACCTTTGGAAAAGAGTTCGATGAAGATAAGTATGAAAAAACTGTTGAAGCATGTGCATTGAAAAAGGACTTTGAGCTATTCTCATGTGGTGATTTGACTGAGATTGGTGAAAGAGGGATTAATATGAGTGGTGGACAGAAACAAAGAATACAGATAGCTAGAGCTGTTTATCAAGATGCTGATATATACCTTTTTGATGATCCTTTCAGTGCTGTCGATGCTCATACCGGCACTCACCTCTTTAAGGAATGTCTTCTGGGGATTCTCAAAGAAAAAACTATACTATTTGTTACACACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCCGGAACATTTGAAGAACTTCTAAAGCAAAATATAGGATTTGAATTATTAGTTGGTGCTCATAGCAAAGCACTAGAGTCAGTTCTTATGGTTGGAAATTCAAGTAAAGCAAATTTAAATCCAATACCTGAAGGAGAATGCATCACCTACTCAAACTCAAGTTCTGAACTTTTGCACACACAACTTGACACAGTGCAAGATAATCCTCCTACAGAAAGCAAAGGAAATAATGATGGAAAATTGGTTACAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTTTACTGGTCTTATTTGACAACTGTTAAAGGAGGAATTCTGGTTCCAATCATACTATTGGCACAGTCTTCATTCCAAATACTTCAGATTGCTAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAAATCTGATGCTAAGCCTATATTTGATATGAATTTCATACTACTTATTTATATGGTACTTTCTGTTGCTGGTTCCCTTTGTGTTCTTCTGAGAGCCATGTTGGTGTTAAATGTTGGACTTTGGACAGCACAAACTTTTTTCACAAGAATGTTGCATAATGTGCAACGAGCCCCCATGTCATTTTTTGATTCTACCCCAACTGGAAGAATCTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAAACAAAATAGGATGGTGTGCTTTCTCAATAATACAAATTCTTGGCACTATTGCGGTGATGTGTCAGGCAGCATGGCAAGTATTTATCATCTTCATTCCAGTAACTGCAATTTGCATATGGTATCAACGATATTATAATCCGACAGCAAGAGAACTGGCTCGCTTAGCACAGATACAAATTACTCCAATTCTCCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGCCGTTTCATGAGCACAAATCTTGTCCTTCTGGATGGCTTCTCAAGGCCATGGTTTCACAACGTGTCTGCAATGGAATGGCTTTCTTACAGATTGAACTTGCTTTCAAATTTTGTTTTTGCCTTTTCACTTGTCTTGCTAGTGAGCCTCCCTGAAGGTTTCATAAATCCAAGCATTGCAGGGTTAGCAGTAACATATGGAATCAATTTGAATGTCTTGCAAGCTTCGGTTATATGGAACATTTGCAATGCAGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATATCGCAAGTGAATCACCTCTTGTGATTGAAGACTGTCGGCCGCCAAGAAACTGGCCAGAAACTGGAACAATATGTTTCCAAAATTTGCAGATACGATATGCTGAACATCTACCATCTGTGTTGAAAAATATCACTTGCACATTTCCTGGAAGGAAGAAAATAGGTGTTGTAGGACGAACTGGCAGTGGTAAATCAACCCTCATACAGGCAATTTTCAGGATTGTTGAACCAAGAGAGGGATGCATTATGATTGACAATGTGGACATATGTGAGATAGGTCTCCATGACTTAAGGTCAAGGCTCAGCATTATCCCACAAGATCCAGCCTTGTTTGAAGGCACAGTCAGAGGAAACCTGGACCCTCTGGAGCAATACTCTGACAATGAAGTGTGGGAGGCACTAGATAAATGTCAGCTAGGACACCTAGTGAGGGCCAAGGAAGAGAAGTTGGACTCCCCAGTGGTTGAAAATGGTGATAATTGGAGTGCTGGACAAAGGCAATTATTTTGCCTTGGAAGAGCTTTGCTGAAGAAAAGCAGCATTTTAGTACTAGATGAAGCAACAGCCTCAGTGGACTCTGCAACTGATGGGGTGATACAGGATATCATTTGTCAAGAGTTCAACAATCGAACAGTTGTCACAATAGCTCATCGAATCCACACAGTCATCGATAGCGACTTGGTTTTGGTTCTCAGCGATGGGAGAATTGCAGAATATGATGAACCATCAAAGTTACTTGAAAGAGAAGATTCTTTCTTCTACAAACTTATAAAGGAGTACTCTAGCAGATCCCATAGCTTCAATAACTTGGCAACTCAACATGTCCAAGACAGGGAATAA

Protein sequence

>Msa1245300

MNLHEFNIVLHLALTELRSFSWTTWQPLVSPCLLEHVTLPLEFGFLVILLVQLLRNCVNNITKQNKVSQVHPNCIKFGFPYMISLACTTLFLAIHALMLILMLNHEPQCTSKLQTFTSEIIQVLSSATILIAICKMSKTNANFPWIIRIWWFFSFLLSIISTALHVHFSIKNKGVIGIKEYADFLGLFVSTCLLVVSTRGKTGIVIIATNGSISEPLLEEKNEKHSSQCLKESPYGKATIFQLINFSWLNPLFAVGYKKPLQLDDIPNLDIKDSAEYLNCAFDESLRQVKEKDGTTNPSIYKAIYLFARKKAAINALFAIISASASYVGPYLITDFVNFLTEKDSRGLKSGYLLSLGFLCAKMVEVIAQRQWIFGARQLGLRLRAALISHIYKKGLHLSSRSRQSHSGGEIMNYMSVDVQRITDFVWYVNVIWMLPIQISLAVIVLQTNLGLGSLAALAATLAVMTLNIPLTKIQKRYQTKIMDAKDNRMKTTSEILKNMRTLKLQAWDSEFFQRIESLRSVEYGWLSKSLRQQAFSAFIFWGSPTFISVITFWTCMFVGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASFLKKEEIQHDVIEYVSKDKTEFDVVIEKGRFSWDPETTIPTLDEIELNVKRGMKVAICGSVGSGKSSMLSGVLGEIFKQSGNVKISGTKAYVPQSAWILTGNIRDNITFGKEFDEDKYEKTVEACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLFDDPFSAVDAHTGTHLFKECLLGILKEKTILFVTHQVEFLPAADLILVMQNGRIAQAGTFEELLKQNIGFELLVGAHSKALESVLMVGNSSKANLNPIPEGECITYSNSSSELLHTQLDTVQDNPPTESKGNNDGKLVTDEERETGSISKEVYWSYLTTVKGGILVPIILLAQSSFQILQIASNYWMAWVCPTKSDAKPIFDMNFILLIYMVLSVAGSLCVLLRAMLVLNVGLWTAQTFFTRMLHNVQRAPMSFFDSTPTGRILNRASTDQSVLDLEMANKIGWCAFSIIQILGTIAVMCQAAWQVFIIFIPVTAICIWYQRYYNPTARELARLAQIQITPILHHFSESLAGAASIRAFDQEGRFMSTNLVLLDGFSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVSLPEGFINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERILQYTNIASESPLVIEDCRPPRNWPETGTICFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGCIMIDNVDICEIGLHDLRSRLSIIPQDPALFEGTVRGNLDPLEQYSDNEVWEALDKCQLGHLVRAKEEKLDSPVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQDIICQEFNNRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDEPSKLLEREDSFFYKLIKEYSSRSHSFNNLATQHVQDRE*