AlfalfaGEDB | Msa1351590

M. sativa cultivar zhongmu-4 / Msa1351590

KEGG: K03098
GO: -
PFAM: PF08212.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1351590	AHF50207.1	100.000	168	0	0	1	168	1	168	1.68e-121	349

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1351590	sp\|Q9FGT8\|TIL_ARATH	76.970	165	38	0	4	168	2	166	1.17e-91	267

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1351590	W0G592	100.000	168	0	0	1	168	1	168	8.04e-122	349

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008330	Msa1351590	0.814506	1.488450e-51	-8.615850e-47
Msa0012740	Msa1351590	0.818345	2.057555e-52	-8.615850e-47
Msa0021980	Msa1351590	0.829427	5.180726e-55	-8.615850e-47
Msa0026670	Msa1351590	0.813112	3.018686e-51	-8.615850e-47
Msa0039200	Msa1351590	0.802860	4.591010e-49	-8.615850e-47
Msa0040190	Msa1351590	0.817760	2.790463e-52	-8.615850e-47
Msa0053480	Msa1351590	0.802802	4.719895e-49	-8.615850e-47
Msa0074760	Msa1351590	0.804872	1.753413e-49	-8.615850e-47
Msa0077330	Msa1351590	0.802826	4.666325e-49	-8.615850e-47
Msa0087880	Msa1351590	0.818252	2.159964e-52	-8.615850e-47
Msa0117300	Msa1351590	0.806890	6.601759e-50	-8.615850e-47
Msa0120310	Msa1351590	0.815656	8.266683e-52	-8.615850e-47
Msa1349410	Msa1351590	0.802689	4.980209e-49	-8.615850e-47
Msa1351560	Msa1351590	0.817086	3.957511e-52	-8.615850e-47
Msa1351590	Msa1353280	0.800592	1.340683e-48	-8.615850e-47
Msa1351590	Msa1353760	0.808411	3.138049e-50	-8.615850e-47
Msa1351590	Msa1368660	0.823284	1.504482e-53	-8.615850e-47
Msa1351590	Msa1374210	0.807447	5.033255e-50	-8.615850e-47
Msa1351590	Msa1381720	0.822672	2.089637e-53	-8.615850e-47
Msa1351590	Msa1385940	0.806762	7.028987e-50	-8.615850e-47
Msa1351590	Msa1388070	0.834317	3.214414e-56	-8.615850e-47
Msa1351590	Msa1388270	0.813249	2.816379e-51	-8.615850e-47
Msa1351590	Msa1393600	0.857824	1.254757e-62	-8.615850e-47
Msa1351590	Msa1405190	0.822476	2.321422e-53	-8.615850e-47
Msa1351590	Msa1413220	0.811026	8.600385e-51	-8.615850e-47
Msa1351590	Msa1413880	0.806898	6.578699e-50	-8.615850e-47
Msa1351590	Msa1432250	0.812511	4.086724e-51	-8.615850e-47
Msa1351590	Msa1440160	0.819173	1.334279e-52	-8.615850e-47
Msa1351590	Msa1446220	0.820685	6.019940e-53	-8.615850e-47
Msa1351590	Msa1452200	0.802613	5.163208e-49	-8.615850e-47
Msa1351590	Msa1454940	0.820893	5.393039e-53	-8.615850e-47
Msa1351590	Msa1456410	0.821213	4.549868e-53	-8.615850e-47
Msa1351590	Msa1456790	0.817560	3.095549e-52	-8.615850e-47
Msa0608940	Msa1351590	0.803930	2.755269e-49	-8.615850e-47
Msa0610850	Msa1351590	0.813055	3.106354e-51	-8.615850e-47
Msa0619480	Msa1351590	0.838844	2.258616e-57	-8.615850e-47
Msa0623360	Msa1351590	0.817167	3.795277e-52	-8.615850e-47
Msa0635990	Msa1351590	0.803671	3.119148e-49	-8.615850e-47
Msa0639640	Msa1351590	0.821772	3.380577e-53	-8.615850e-47
Msa0648200	Msa1351590	0.810858	9.350600e-51	-8.615850e-47
Msa0649530	Msa1351590	0.805479	1.308467e-49	-8.615850e-47
Msa0657860	Msa1351590	0.806824	6.817474e-50	-8.615850e-47
Msa0659640	Msa1351590	0.842059	3.257354e-58	-8.615850e-47
Msa0665010	Msa1351590	0.805721	1.164174e-49	-8.615850e-47
Msa0674200	Msa1351590	0.810334	1.214038e-50	-8.615850e-47
Msa0687320	Msa1351590	0.854705	1.030020e-61	-8.615850e-47
Msa0691140	Msa1351590	0.809267	2.059243e-50	-8.615850e-47
Msa0691740	Msa1351590	0.800557	1.362660e-48	-8.615850e-47
Msa0693560	Msa1351590	0.816286	5.981865e-52	-8.615850e-47
Msa0702200	Msa1351590	0.812146	4.908953e-51	-8.615850e-47
Msa0702310	Msa1351590	0.810333	1.214130e-50	-8.615850e-47
Msa0702620	Msa1351590	0.805436	1.336105e-49	-8.615850e-47
Msa0714060	Msa1351590	0.817696	2.884137e-52	-8.615850e-47
Msa0714200	Msa1351590	0.818288	2.119275e-52	-8.615850e-47
Msa0729780	Msa1351590	0.814147	1.786387e-51	-8.615850e-47
Msa0736930	Msa1351590	0.807934	3.965316e-50	-8.615850e-47
Msa0738600	Msa1351590	0.813355	2.669863e-51	-8.615850e-47
Msa0755500	Msa1351590	0.805662	1.197972e-49	-8.615850e-47
Msa0755590	Msa1351590	0.801072	1.069960e-48	-8.615850e-47
Msa0756440	Msa1351590	0.818104	2.332663e-52	-8.615850e-47
Msa0766880	Msa1351590	0.828470	8.829289e-55	-8.615850e-47
Msa0770020	Msa1351590	0.841894	3.601868e-58	-8.615850e-47
Msa0775420	Msa1351590	0.804573	2.024829e-49	-8.615850e-47
Msa0796610	Msa1351590	0.822790	1.962349e-53	-8.615850e-47
Msa0797240	Msa1351590	0.808698	2.726060e-50	-8.615850e-47
Msa0807980	Msa1351590	0.815456	9.157633e-52	-8.615850e-47
Msa0815950	Msa1351590	0.818594	1.806671e-52	-8.615850e-47
Msa0818950	Msa1351590	0.812514	4.079574e-51	-8.615850e-47
Msa0833910	Msa1351590	0.830649	2.607561e-55	-8.615850e-47
Msa0834160	Msa1351590	0.830346	3.092090e-55	-8.615850e-47
Msa0835550	Msa1351590	0.824109	9.643014e-54	-8.615850e-47
Msa0840570	Msa1351590	0.808813	2.575056e-50	-8.615850e-47
Msa0133670	Msa1351590	0.804094	2.547594e-49	-8.615850e-47
Msa0133880	Msa1351590	0.801864	7.362500e-49	-8.615850e-47
Msa0134550	Msa1351590	0.815658	8.259575e-52	-8.615850e-47
Msa0138380	Msa1351590	0.823738	1.178101e-53	-8.615850e-47
Msa0156780	Msa1351590	0.816077	6.659059e-52	-8.615850e-47
Msa0184120	Msa1351590	0.808270	3.363981e-50	-8.615850e-47
Msa0184850	Msa1351590	0.813218	2.861546e-51	-8.615850e-47
Msa0188500	Msa1351590	0.805836	1.101393e-49	-8.615850e-47
Msa0198140	Msa1351590	0.800617	1.325293e-48	-8.615850e-47
Msa0198220	Msa1351590	0.806995	6.274461e-50	-8.615850e-47
Msa0221940	Msa1351590	0.827407	1.591401e-54	-8.615850e-47
Msa0228360	Msa1351590	0.807739	4.363297e-50	-8.615850e-47
Msa0230980	Msa1351590	0.803084	4.126981e-49	-8.615850e-47
Msa1230190	Msa1351590	0.812852	3.441060e-51	-8.615850e-47
Msa1245300	Msa1351590	0.814181	1.755852e-51	-8.615850e-47
Msa1252040	Msa1351590	0.809537	1.801740e-50	-8.615850e-47
Msa1262740	Msa1351590	0.809698	1.663859e-50	-8.615850e-47
Msa1263610	Msa1351590	0.811845	5.708918e-51	-8.615850e-47
Msa1264140	Msa1351590	0.966776	2.250093e-126	-8.615850e-47
Msa1264230	Msa1351590	0.806684	7.297600e-50	-8.615850e-47
Msa1289340	Msa1351590	0.812683	3.748346e-51	-8.615850e-47
Msa1296600	Msa1351590	0.829963	3.835125e-55	-8.615850e-47
Msa1301410	Msa1351590	0.806175	9.347142e-50	-8.615850e-47
Msa1302780	Msa1351590	0.868732	5.247283e-66	-8.615850e-47
Msa1310300	Msa1351590	0.808838	2.543476e-50	-8.615850e-47
Msa1323920	Msa1351590	0.806064	9.861244e-50	-8.615850e-47
Msa1329010	Msa1351590	0.824711	6.959879e-54	-8.615850e-47
Msa1329660	Msa1351590	0.845385	4.197985e-59	-8.615850e-47
Msa1329820	Msa1351590	0.800617	1.324835e-48	-8.615850e-47
Msa1330910	Msa1351590	0.809856	1.538629e-50	-8.615850e-47
Msa1342400	Msa1351590	0.863703	2.059325e-64	-8.615850e-47
Msa1343540	Msa1351590	0.822479	2.317492e-53	-8.615850e-47
Msa0370510	Msa1351590	0.828184	1.035188e-54	-8.615850e-47
Msa0373110	Msa1351590	0.816576	5.148917e-52	-8.615850e-47
Msa0379720	Msa1351590	0.804111	2.526451e-49	-8.615850e-47
Msa0403720	Msa1351590	0.842748	2.139703e-58	-8.615850e-47
Msa0413590	Msa1351590	0.801186	1.014015e-48	-8.615850e-47
Msa0417130	Msa1351590	0.800216	1.598956e-48	-8.615850e-47
Msa0427050	Msa1351590	0.810956	8.908311e-51	-8.615850e-47
Msa0429100	Msa1351590	0.807960	3.916268e-50	-8.615850e-47
Msa0431940	Msa1351590	0.824433	8.093601e-54	-8.615850e-47
Msa0448400	Msa1351590	0.805333	1.404063e-49	-8.615850e-47
Msa0451370	Msa1351590	0.834162	3.515820e-56	-8.615850e-47
Msa0456480	Msa1351590	0.806857	6.711193e-50	-8.615850e-47
Msa0467480	Msa1351590	0.829947	3.870532e-55	-8.615850e-47
Msa0472870	Msa1351590	0.809568	1.773960e-50	-8.615850e-47
Msa0475830	Msa1351590	0.843648	1.230967e-58	-8.615850e-47
Msa0995660	Msa1351590	0.814967	1.176105e-51	-8.615850e-47
Msa0998940	Msa1351590	0.857201	1.917499e-62	-8.615850e-47
Msa1029190	Msa1351590	0.811541	6.648891e-51	-8.615850e-47
Msa1033230	Msa1351590	0.835432	1.684064e-56	-8.615850e-47
Msa1071460	Msa1351590	0.826160	3.159913e-54	-8.615850e-47
Msa1072770	Msa1351590	0.841004	6.181087e-58	-8.615850e-47
Msa1086830	Msa1351590	0.802044	6.760918e-49	-8.615850e-47
Msa1104430	Msa1351590	0.808246	3.403713e-50	-8.615850e-47
Msa0240460	Msa1351590	0.824876	6.365425e-54	-8.615850e-47
Msa0256170	Msa1351590	0.819354	1.214021e-52	-8.615850e-47
Msa0263520	Msa1351590	0.816287	5.977987e-52	-8.615850e-47
Msa0268220	Msa1351590	0.809073	2.265430e-50	-8.615850e-47
Msa0278340	Msa1351590	0.801399	9.171957e-49	-8.615850e-47
Msa0338670	Msa1351590	0.816141	6.444852e-52	-8.615850e-47
Msa0343460	Msa1351590	0.801215	9.999924e-49	-8.615850e-47
Msa0358720	Msa1351590	0.802625	5.134069e-49	-8.615850e-47
Msa1108780	Msa1351590	0.804060	2.589932e-49	-8.615850e-47
Msa1122480	Msa1351590	0.833648	4.726024e-56	-8.615850e-47
Msa1147600	Msa1351590	0.812847	3.449873e-51	-8.615850e-47
Msa1152500	Msa1351590	0.801577	8.430736e-49	-8.615850e-47
Msa1154770	Msa1351590	0.809231	2.095495e-50	-8.615850e-47
Msa1161120	Msa1351590	0.827455	1.549543e-54	-8.615850e-47
Msa1161520	Msa1351590	0.801913	7.193599e-49	-8.615850e-47
Msa1173410	Msa1351590	0.801434	9.020881e-49	-8.615850e-47
Msa1190820	Msa1351590	0.804521	2.075835e-49	-8.615850e-47
Msa1203840	Msa1351590	0.818587	1.813870e-52	-8.615850e-47
Msa1203860	Msa1351590	0.811876	5.621647e-51	-8.615850e-47
Msa1204110	Msa1351590	0.825866	3.710319e-54	-8.615850e-47
Msa1204380	Msa1351590	0.815435	9.256867e-52	-8.615850e-47
Msa1211100	Msa1351590	0.822706	2.051910e-53	-8.615850e-47
Msa1211120	Msa1351590	0.825032	5.845669e-54	-8.615850e-47
Msa1211280	Msa1351590	0.802210	6.249681e-49	-8.615850e-47
Msa1211370	Msa1351590	0.808376	3.193401e-50	-8.615850e-47
Msa1215660	Msa1351590	0.801663	8.095753e-49	-8.615850e-47
Msa1216700	Msa1351590	0.841140	5.692127e-58	-8.615850e-47
Msa1216900	Msa1351590	0.821813	3.306423e-53	-8.615850e-47
Msa0496460	Msa1351590	0.815890	7.331124e-52	-8.615850e-47
Msa0496470	Msa1351590	0.807370	5.225671e-50	-8.615850e-47
Msa0498920	Msa1351590	0.802689	4.979996e-49	-8.615850e-47
Msa0515400	Msa1351590	0.800638	1.312211e-48	-8.615850e-47
Msa0520810	Msa1351590	0.810115	1.352911e-50	-8.615850e-47
Msa0546370	Msa1351590	0.800486	1.409350e-48	-8.615850e-47
Msa0555510	Msa1351590	0.825935	3.572413e-54	-8.615850e-47
Msa0565760	Msa1351590	0.809733	1.635611e-50	-8.615850e-47
Msa0566010	Msa1351590	0.814402	1.568891e-51	-8.615850e-47
Msa0568490	Msa1351590	0.802853	4.605411e-49	-8.615850e-47
Msa0569630	Msa1351590	0.802806	4.710984e-49	-8.615850e-47
Msa0578890	Msa1351590	0.817939	2.541813e-52	-8.615850e-47
Msa0582090	Msa1351590	0.813148	2.963861e-51	-8.615850e-47
Msa0584590	Msa1351590	0.823048	1.708625e-53	-8.615850e-47
Msa0587060	Msa1351590	0.802550	5.319930e-49	-8.615850e-47
Msa0595240	Msa1351590	0.810821	9.524518e-51	-8.615850e-47
Msa0596080	Msa1351590	0.803063	4.168771e-49	-8.615850e-47
Msa0848980	Msa1351590	0.806370	8.503619e-50	-8.615850e-47
Msa0895860	Msa1351590	0.826641	2.426966e-54	-8.615850e-47
Msa0899080	Msa1351590	0.810481	1.128412e-50	-8.615850e-47
Msa0924820	Msa1351590	0.805677	1.189044e-49	-8.615850e-47
Msa0927890	Msa1351590	0.843005	1.828194e-58	-8.615850e-47
Msa0967250	Msa1351590	0.834585	2.753235e-56	-8.615850e-47
Msa0967260	Msa1351590	0.855251	7.149178e-62	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa1351590	MtrunA17_Chr4g0074351	97.024	168	5	1	168	1	168	9.96e-122	340
Msa1351590	MtrunA17_Chr4g0074361	81.761	159	29	10	168	32	190	6.45e-96	275
Msa1351590	MtrunA17_Chr4g0074341	77.439	164	37	5	168	103	266	2.01e-94	275

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1351590	AT5G58070.1	76.970	165	38	0	4	168	2	166	1.19e-92	267

Find 82 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAGCTTGGCTTCATCACTTT+TGG	0.137021	tig0012325:-6794	Msa1351590:intergenic
GTTATTGCTTCCTCTATTTC+AGG	0.192532	tig0012325:-6525	Msa1351590:intergenic
ATTGATTCATATTAGAGTTC+TGG	0.264894	tig0012325:-7964	Msa1351590:intergenic
TTCCTGCTGTTGGAGATTAC+TGG	0.269337	tig0012325:+6854	Msa1351590:CDS
CTTATAAGCACTTCCTTCTA+TGG	0.269670	tig0012325:-6764	Msa1351590:intergenic
TATTTATTTATTTCACAAAA+AGG	0.269806	tig0012325:-7865	Msa1351590:intergenic
GGCCTACCAATAAATATCTA+TGG	0.270272	tig0012325:+6920	Msa1351590:CDS
CATAGAAGGAAGTGCTTATA+AGG	0.280018	tig0012325:+6765	Msa1351590:CDS
GCTTACCCATAGATATTTAT+TGG	0.283517	tig0012325:-6926	Msa1351590:intergenic
TAATATGAATCAATTTAGTT+TGG	0.296555	tig0012325:+7973	Msa1351590:three_prime_UTR
AAGATATTCAACAACGAAAA+AGG	0.302914	tig0012325:-8152	Msa1351590:intergenic
TCTCCAACAGCAGGAATAAT+TGG	0.308299	tig0012325:-6847	Msa1351590:intergenic
CCTCCACCTGAGTAAGATTA+AGG	0.321912	tig0012325:+7824	Msa1351590:exon
GTGAAATAAATAAATAGTTA+TGG	0.373929	tig0012325:+7872	Msa1351590:three_prime_UTR
TGTAGATTGCTTCATCCAAA+TGG	0.401693	tig0012325:-7730	Msa1351590:intergenic
ATGGCTGATGTGGAAAGATA+TGG	0.403552	tig0012325:+8237	Msa1351590:three_prime_UTR
ACTATGCAGGCAACCCCATT+TGG	0.413202	tig0012325:+7715	Msa1351590:CDS
TTTGTTAGCACTTATCAGAT+TGG	0.413995	tig0012325:-6468	Msa1351590:intergenic
GATCTAGTAGTCGTAGATAA+AGG	0.424602	tig0012325:-8205	Msa1351590:intergenic
GTAGATTGCTTCATCCAAAT+GGG	0.436253	tig0012325:-7729	Msa1351590:intergenic
TTTGATACTGAAATTGTGTA+AGG	0.436553	tig0012325:+8061	Msa1351590:three_prime_UTR
GGTAAAAGAACCTCCATAGA+AGG	0.443815	tig0012325:+6751	Msa1351590:CDS
GGTTGTGAAGGGTGTAGACT+TGG	0.444182	tig0012325:+6591	Msa1351590:CDS
ATAGAATTTAACCTTGAGCT+TGG	0.456530	tig0012325:-6809	Msa1351590:intergenic
GAAGGACAAGGAGGTTGTGA+AGG	0.458131	tig0012325:+6579	Msa1351590:CDS
GTAAATTGCAATGCGTGTAT+TGG	0.459376	tig0012325:+8004	Msa1351590:three_prime_UTR
GATTATCAATATGCTCTCAT+TGG	0.460982	tig0012325:+6895	Msa1351590:CDS
TTGCCAATTATTCCTGCTGT+TGG	0.461126	tig0012325:+6844	Msa1351590:CDS
AAGGAGTTGTAACTTATTGT+TGG	0.461791	tig0012325:+8080	Msa1351590:three_prime_UTR
GCAGGAATAATTGGCAAGAA+TGG	0.465330	tig0012325:-6838	Msa1351590:intergenic
ATGAAGTGTATTATGTAATC+AGG	0.473308	tig0012325:+7902	Msa1351590:three_prime_UTR
CCTTAGCTTTCTCAACAAGC+TGG	0.479647	tig0012325:-7754	Msa1351590:intergenic
CACTCTACACATGGCTGATG+TGG	0.483087	tig0012325:+8227	Msa1351590:three_prime_UTR
TAAACAAACTATAGATAAGT+TGG	0.483562	tig0012325:+8036	Msa1351590:three_prime_UTR
TTCATGTTCTCAATGAGACT+TGG	0.488210	tig0012325:+6722	Msa1351590:CDS
GTTGAGAAAGCTAAGGAAGA+AGG	0.488479	tig0012325:+7761	Msa1351590:CDS
CGTAGATAAAGGATAAATCA+TGG	0.492460	tig0012325:-8194	Msa1351590:intergenic
TGATATTGTACAGCAAAGAT+TGG	0.496672	tig0012325:+8117	Msa1351590:three_prime_UTR
TGTAGACTTGGAGAGGTACA+TGG	0.499697	tig0012325:+6603	Msa1351590:CDS
CAGATTGGAGTAACTTTCCA+AGG	0.509623	tig0012325:-6453	Msa1351590:intergenic
CATATTGATAATCTTGATCA+AGG	0.510400	tig0012325:-6885	Msa1351590:intergenic
TGTCTCTCTACCTGAAATAG+AGG	0.512104	tig0012325:+6515	Msa1351590:five_prime_UTR
ATCCAGTAATCTCCAACAGC+AGG	0.514048	tig0012325:-6856	Msa1351590:intergenic
TATCAATATGCTCTCATTGG+TGG	0.520368	tig0012325:+6898	Msa1351590:CDS
ATCAATATGCTCTCATTGGT+GGG	0.522349	tig0012325:+6899	Msa1351590:CDS
AAGGACAAGGAGGTTGTGAA+GGG	0.527129	tig0012325:+6580	Msa1351590:CDS
ACCCATAGATATTTATTGGT+AGG	0.528773	tig0012325:-6922	Msa1351590:intergenic
GCCTACCAATAAATATCTAT+GGG	0.548969	tig0012325:+6921	Msa1351590:CDS
CAATATAATAGAACAGAACA+AGG	0.549215	tig0012325:-6492	Msa1351590:intergenic
TTGGTCCCTAGATACTATGC+AGG	0.558593	tig0012325:+7702	Msa1351590:intron
ACAAAACACAAAGAAAACCT+TGG	0.558934	tig0012325:+6436	None:intergenic
TGAGGACCTTAATCTTACTC+AGG	0.562281	tig0012325:-7830	Msa1351590:intergenic
ACATACACTCTCAACAGTGA+TGG	0.564431	tig0012325:+6694	Msa1351590:CDS
ATAAGCACTTCCTTCTATGG+AGG	0.564915	tig0012325:-6761	Msa1351590:intergenic
AACCTCCTTGTCCTTCCCTA+CGG	0.565364	tig0012325:-6572	Msa1351590:intergenic
CCTTAATCTTACTCAGGTGG+AGG	0.569308	tig0012325:-7824	Msa1351590:intergenic
ATCACTGTTGAGAGTGTATG+TGG	0.583825	tig0012325:-6692	Msa1351590:intergenic
ATGTGGAAAGATATGGGTAG+GGG	0.588686	tig0012325:+8244	Msa1351590:three_prime_UTR
GATGTGGAAAGATATGGGTA+GGG	0.590937	tig0012325:+8243	Msa1351590:three_prime_UTR
GGAATAATTGGCAAGAATGG+AGG	0.591527	tig0012325:-6835	Msa1351590:intergenic
ATAAATCATGGGATCCCCGC+TGG	0.593383	tig0012325:-8182	Msa1351590:intergenic
AATGGGAAACACCGTAGGGA+AGG	0.597163	tig0012325:+6561	Msa1351590:exon
GTAGATAAAGGATAAATCAT+GGG	0.597389	tig0012325:-8193	Msa1351590:intergenic
AAGTGATGAAGCCAAGCTCA+AGG	0.599556	tig0012325:+6798	Msa1351590:CDS
CATACACTCTCAACAGTGAT+GGG	0.600831	tig0012325:+6695	Msa1351590:CDS
GGACCTTAATCTTACTCAGG+TGG	0.603353	tig0012325:-7827	Msa1351590:intergenic
CTACTAGATCACTCTACACA+TGG	0.604555	tig0012325:+8218	Msa1351590:three_prime_UTR
TGGCTGATGTGGAAAGATAT+GGG	0.613888	tig0012325:+8238	Msa1351590:three_prime_UTR
TAGATTGCTTCATCCAAATG+GGG	0.620741	tig0012325:-7728	Msa1351590:intergenic
TGATGTGGAAAGATATGGGT+AGG	0.621999	tig0012325:+8242	Msa1351590:three_prime_UTR
ACTTGGAGAGGTACATGGGT+AGG	0.635238	tig0012325:+6608	Msa1351590:CDS
CCAGCTTGTTGAGAAAGCTA+AGG	0.636813	tig0012325:+7754	Msa1351590:CDS
CTCAATGAGACTTGGAATGG+TGG	0.645948	tig0012325:+6730	Msa1351590:CDS
GTAGACTTGGAGAGGTACAT+GGG	0.653419	tig0012325:+6604	Msa1351590:CDS
TGAAGGGTGTAGACTTGGAG+AGG	0.655962	tig0012325:+6596	Msa1351590:CDS
TGGAGAGGTACATGGGTAGG+TGG	0.656685	tig0012325:+6611	Msa1351590:CDS
TGTGGAAAGATATGGGTAGG+GGG	0.680395	tig0012325:+8245	Msa1351590:three_prime_UTR
TCAGGTGGAGGATCACTCTG+TGG	0.704206	tig0012325:-7812	Msa1351590:intergenic
CACCGTAGGGAAGGACAAGG+AGG	0.708944	tig0012325:+6570	Msa1351590:CDS
GTTCTCAATGAGACTTGGAA+TGG	0.711280	tig0012325:+6727	Msa1351590:CDS
AATATAATAGAACAGAACAA+GGG	0.719173	tig0012325:-6491	Msa1351590:intergenic
AAACACCGTAGGGAAGGACA+AGG	0.745653	tig0012325:+6567	Msa1351590:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACTAAAAATTGTTTTATTTA+AGG	+	tig0012325:7316-7335	Msa1351590:intron	10.0%
!!!	TTTTAAGTTTTAATTTTCTT+AGG	+	tig0012325:7568-7587	Msa1351590:intron	10.0%
!!	TATTTATTTATTTCACAAAA+AGG	-	tig0012325:7868-7887	Msa1351590:intergenic	10.0%
!!!	ACTAAAAATTGTTTTATTTA+AGG	+	tig0012325:7316-7335	Msa1351590:intron	10.0%
!!!	TTTTAAGTTTTAATTTTCTT+AGG	+	tig0012325:7568-7587	Msa1351590:intron	10.0%
!!	TATTTATTTATTTCACAAAA+AGG	-	tig0012325:7868-7887	Msa1351590:intergenic	10.0%
!!	GTGAAATAAATAAATAGTTA+TGG	+	tig0012325:7872-7891	Msa1351590:three_prime_UTR	15.0%
!!!	TAATTTCAAGTCAAAAATAA+AGG	+	tig0012325:7937-7956	Msa1351590:three_prime_UTR	15.0%
!!	TAATATGAATCAATTTAGTT+TGG	+	tig0012325:7973-7992	Msa1351590:three_prime_UTR	15.0%
!!	GTGAAATAAATAAATAGTTA+TGG	+	tig0012325:7872-7891	Msa1351590:three_prime_UTR	15.0%
!!!	TAATTTCAAGTCAAAAATAA+AGG	+	tig0012325:7937-7956	Msa1351590:three_prime_UTR	15.0%
!!	TAATATGAATCAATTTAGTT+TGG	+	tig0012325:7973-7992	Msa1351590:three_prime_UTR	15.0%
!!	AATATAATAGAACAGAACAA+GGG	-	tig0012325:6494-6513	None:intergenic	20.0%
!!!	TTGCTTTTTCTTGTTAAATT+AGG	+	tig0012325:6965-6984	Msa1351590:intron	20.0%
!!	AAAATAATCCAAGTTATTGT+AGG	-	tig0012325:7684-7703	Msa1351590:intergenic	20.0%
!!!	TACAATAACTTGGATTATTT+TGG	+	tig0012325:7683-7702	Msa1351590:intron	20.0%
!!	TAAACAAACTATAGATAAGT+TGG	+	tig0012325:8036-8055	Msa1351590:three_prime_UTR	20.0%
!!	AATATAATAGAACAGAACAA+GGG	-	tig0012325:6494-6513	Msa1351590:intergenic	20.0%
!!!	TTGCTTTTTCTTGTTAAATT+AGG	+	tig0012325:6965-6984	Msa1351590:intron	20.0%
!!	AAAATAATCCAAGTTATTGT+AGG	-	tig0012325:7684-7703	Msa1351590:intergenic	20.0%
!!!	TACAATAACTTGGATTATTT+TGG	+	tig0012325:7683-7702	Msa1351590:intron	20.0%
!!	TAAACAAACTATAGATAAGT+TGG	+	tig0012325:8036-8055	Msa1351590:three_prime_UTR	20.0%
!	CAATATAATAGAACAGAACA+AGG	-	tig0012325:6495-6514	None:intergenic	25.0%
!	ATAACATCCACAACAAAAAA+TGG	+	tig0012325:6543-6562	Msa1351590:exon	25.0%
!	TAACATCCACAACAAAAAAT+GGG	+	tig0012325:6544-6563	Msa1351590:exon	25.0%
!!	CATATTGATAATCTTGATCA+AGG	-	tig0012325:6888-6907	Msa1351590:intergenic	25.0%
!	TCAAATATAATCACATGTGT+GGG	-	tig0012325:7013-7032	Msa1351590:intergenic	25.0%
!	ATCAAATATAATCACATGTG+TGG	-	tig0012325:7014-7033	Msa1351590:intergenic	25.0%
!!	TTGACTTCTAAGAAAAATTG+TGG	+	tig0012325:7143-7162	Msa1351590:intron	25.0%
!!	ATTTTTCTTAGACACAATTG+TGG	-	tig0012325:7171-7190	Msa1351590:intergenic	25.0%
!	ATGAAGTGTATTATGTAATC+AGG	+	tig0012325:7902-7921	Msa1351590:three_prime_UTR	25.0%
!!	ATTGATTCATATTAGAGTTC+TGG	-	tig0012325:7967-7986	Msa1351590:intergenic	25.0%
!	TTTGATACTGAAATTGTGTA+AGG	+	tig0012325:8061-8080	Msa1351590:three_prime_UTR	25.0%
!	AAGATATTCAACAACGAAAA+AGG	-	tig0012325:8155-8174	Msa1351590:intergenic	25.0%
!	GTAGATAAAGGATAAATCAT+GGG	-	tig0012325:8196-8215	Msa1351590:intergenic	25.0%
!!!	TTCCATTCATATCATTTTTG+TGG	+	tig0012325:8270-8289	Msa1351590:three_prime_UTR	25.0%
!	TTCCACAAAAATGATATGAA+TGG	-	tig0012325:8275-8294	Msa1351590:intergenic	25.0%
!!!	TTCATATCATTTTTGTGGAA+TGG	+	tig0012325:8275-8294	Msa1351590:three_prime_UTR	25.0%
!!	ATTTTTGTGGAATGGTTTTT+CGG	+	tig0012325:8283-8302	Msa1351590:three_prime_UTR	25.0%
!	CAATATAATAGAACAGAACA+AGG	-	tig0012325:6495-6514	Msa1351590:intergenic	25.0%
!	ATAACATCCACAACAAAAAA+TGG	+	tig0012325:6543-6562	Msa1351590:exon	25.0%
!	TAACATCCACAACAAAAAAT+GGG	+	tig0012325:6544-6563	Msa1351590:exon	25.0%
!!	CATATTGATAATCTTGATCA+AGG	-	tig0012325:6888-6907	Msa1351590:intergenic	25.0%
!	TCAAATATAATCACATGTGT+GGG	-	tig0012325:7013-7032	Msa1351590:intergenic	25.0%
!	ATCAAATATAATCACATGTG+TGG	-	tig0012325:7014-7033	Msa1351590:intergenic	25.0%
!!	TTGACTTCTAAGAAAAATTG+TGG	+	tig0012325:7143-7162	Msa1351590:intron	25.0%
!!	ATTTTTCTTAGACACAATTG+TGG	-	tig0012325:7171-7190	Msa1351590:intergenic	25.0%
!	ATGAAGTGTATTATGTAATC+AGG	+	tig0012325:7902-7921	Msa1351590:three_prime_UTR	25.0%
!!	ATTGATTCATATTAGAGTTC+TGG	-	tig0012325:7967-7986	Msa1351590:intergenic	25.0%
!	TTTGATACTGAAATTGTGTA+AGG	+	tig0012325:8061-8080	Msa1351590:three_prime_UTR	25.0%
!	AAGATATTCAACAACGAAAA+AGG	-	tig0012325:8155-8174	Msa1351590:intergenic	25.0%
!	GTAGATAAAGGATAAATCAT+GGG	-	tig0012325:8196-8215	Msa1351590:intergenic	25.0%
!!!	TTCCATTCATATCATTTTTG+TGG	+	tig0012325:8270-8289	Msa1351590:three_prime_UTR	25.0%
!	TTCCACAAAAATGATATGAA+TGG	-	tig0012325:8275-8294	Msa1351590:intergenic	25.0%
!!!	TTCATATCATTTTTGTGGAA+TGG	+	tig0012325:8275-8294	Msa1351590:three_prime_UTR	25.0%
!!	ATTTTTGTGGAATGGTTTTT+CGG	+	tig0012325:8283-8302	Msa1351590:three_prime_UTR	25.0%
	TTTGTTAGCACTTATCAGAT+TGG	-	tig0012325:6471-6490	None:intergenic	30.0%
	ATAGAATTTAACCTTGAGCT+TGG	-	tig0012325:6812-6831	Msa1351590:intergenic	30.0%
	GATTATCAATATGCTCTCAT+TGG	+	tig0012325:6895-6914	Msa1351590:CDS	30.0%
	GCCTACCAATAAATATCTAT+GGG	+	tig0012325:6921-6940	Msa1351590:CDS	30.0%
	ACCCATAGATATTTATTGGT+AGG	-	tig0012325:6925-6944	Msa1351590:intergenic	30.0%
	GCTTACCCATAGATATTTAT+TGG	-	tig0012325:6929-6948	Msa1351590:intergenic	30.0%
	AAAAAGCAACGTTAGAGATA+GGG	-	tig0012325:6954-6973	Msa1351590:intergenic	30.0%
	TCTCTCATATGAAAAATGTC+AGG	-	tig0012325:7482-7501	Msa1351590:intergenic	30.0%
	CTTTGACTCATTATAAGAGA+TGG	+	tig0012325:7515-7534	Msa1351590:intron	30.0%
	GAAAGAGAGAAGATTCAATT+TGG	-	tig0012325:7626-7645	Msa1351590:intergenic	30.0%
	TAATCCAAGTTATTGTAGGA+AGG	-	tig0012325:7680-7699	Msa1351590:intergenic	30.0%
	AAGGAGTTGTAACTTATTGT+TGG	+	tig0012325:8080-8099	Msa1351590:three_prime_UTR	30.0%
	TGATATTGTACAGCAAAGAT+TGG	+	tig0012325:8117-8136	Msa1351590:three_prime_UTR	30.0%
	CGTAGATAAAGGATAAATCA+TGG	-	tig0012325:8197-8216	Msa1351590:intergenic	30.0%
	TTTGTTAGCACTTATCAGAT+TGG	-	tig0012325:6471-6490	Msa1351590:intergenic	30.0%
	ATAGAATTTAACCTTGAGCT+TGG	-	tig0012325:6812-6831	Msa1351590:intergenic	30.0%
	GATTATCAATATGCTCTCAT+TGG	+	tig0012325:6895-6914	Msa1351590:CDS	30.0%
	GCCTACCAATAAATATCTAT+GGG	+	tig0012325:6921-6940	Msa1351590:CDS	30.0%
	ACCCATAGATATTTATTGGT+AGG	-	tig0012325:6925-6944	Msa1351590:intergenic	30.0%
	GCTTACCCATAGATATTTAT+TGG	-	tig0012325:6929-6948	Msa1351590:intergenic	30.0%
	AAAAAGCAACGTTAGAGATA+GGG	-	tig0012325:6954-6973	Msa1351590:intergenic	30.0%
	TCTCTCATATGAAAAATGTC+AGG	-	tig0012325:7482-7501	Msa1351590:intergenic	30.0%
	CTTTGACTCATTATAAGAGA+TGG	+	tig0012325:7515-7534	Msa1351590:intron	30.0%
	GAAAGAGAGAAGATTCAATT+TGG	-	tig0012325:7626-7645	Msa1351590:intergenic	30.0%
	TAATCCAAGTTATTGTAGGA+AGG	-	tig0012325:7680-7699	Msa1351590:intergenic	30.0%
	AAGGAGTTGTAACTTATTGT+TGG	+	tig0012325:8080-8099	Msa1351590:three_prime_UTR	30.0%
	TGATATTGTACAGCAAAGAT+TGG	+	tig0012325:8117-8136	Msa1351590:three_prime_UTR	30.0%
	CGTAGATAAAGGATAAATCA+TGG	-	tig0012325:8197-8216	Msa1351590:intergenic	30.0%
	GTTATTGCTTCCTCTATTTC+AGG	-	tig0012325:6528-6547	Msa1351590:intergenic	35.0%
!!!	GTGTTTCCCATTTTTTGTTG+TGG	-	tig0012325:6553-6572	Msa1351590:intergenic	35.0%
	AAAAAATGGGAAACACCGTA+GGG	+	tig0012325:6557-6576	Msa1351590:exon	35.0%
!	TTTTGGGCTGAAAGAATGAA+GGG	-	tig0012325:6654-6673	Msa1351590:intergenic	35.0%
!!	TTTTTGGGCTGAAAGAATGA+AGG	-	tig0012325:6655-6674	Msa1351590:intergenic	35.0%
	TCATTCTTTCAGCCCAAAAA+TGG	+	tig0012325:6655-6674	Msa1351590:CDS	35.0%
!!	CTTGTGTTCTCTCCATTTTT+GGG	-	tig0012325:6670-6689	Msa1351590:intergenic	35.0%
!	TCTTGTGTTCTCTCCATTTT+TGG	-	tig0012325:6671-6690	Msa1351590:intergenic	35.0%
	TTCATGTTCTCAATGAGACT+TGG	+	tig0012325:6722-6741	Msa1351590:CDS	35.0%
	CTTATAAGCACTTCCTTCTA+TGG	-	tig0012325:6767-6786	Msa1351590:intergenic	35.0%
!!	CATAGAAGGAAGTGCTTATA+AGG	+	tig0012325:6765-6784	Msa1351590:CDS	35.0%
	TATCAATATGCTCTCATTGG+TGG	+	tig0012325:6898-6917	Msa1351590:CDS	35.0%
	ATCAATATGCTCTCATTGGT+GGG	+	tig0012325:6899-6918	Msa1351590:CDS	35.0%
	GGCCTACCAATAAATATCTA+TGG	+	tig0012325:6920-6939	Msa1351590:CDS	35.0%
	GAAAAAGCAACGTTAGAGAT+AGG	-	tig0012325:6955-6974	Msa1351590:intergenic	35.0%
!	AGAGCAAGAAAGATTAGTTG+TGG	+	tig0012325:7118-7137	Msa1351590:intron	35.0%
	CAATCATAGCTAGATTGTCT+TGG	-	tig0012325:7231-7250	Msa1351590:intergenic	35.0%
	AAATTGAGAGTGACCACATT+GGG	-	tig0012325:7411-7430	Msa1351590:intergenic	35.0%
	AAAATTGAGAGTGACCACAT+TGG	-	tig0012325:7412-7431	Msa1351590:intergenic	35.0%
	GAACAACACGAAAACTATGA+AGG	+	tig0012325:7599-7618	Msa1351590:intron	35.0%
	TAGATTGCTTCATCCAAATG+GGG	-	tig0012325:7731-7750	Msa1351590:intergenic	35.0%
	GTAGATTGCTTCATCCAAAT+GGG	-	tig0012325:7732-7751	Msa1351590:intergenic	35.0%
	TGTAGATTGCTTCATCCAAA+TGG	-	tig0012325:7733-7752	Msa1351590:intergenic	35.0%
!!!	AAAAGGCATTTTGTGTCTTG+AGG	-	tig0012325:7851-7870	Msa1351590:intergenic	35.0%
	GTAAATTGCAATGCGTGTAT+TGG	+	tig0012325:8004-8023	Msa1351590:three_prime_UTR	35.0%
	GATCTAGTAGTCGTAGATAA+AGG	-	tig0012325:8208-8227	Msa1351590:intergenic	35.0%
	GTTATTGCTTCCTCTATTTC+AGG	-	tig0012325:6528-6547	Msa1351590:intergenic	35.0%
!!!	GTGTTTCCCATTTTTTGTTG+TGG	-	tig0012325:6553-6572	Msa1351590:intergenic	35.0%
	AAAAAATGGGAAACACCGTA+GGG	+	tig0012325:6557-6576	Msa1351590:exon	35.0%
!	TTTTGGGCTGAAAGAATGAA+GGG	-	tig0012325:6654-6673	Msa1351590:intergenic	35.0%
!!	TTTTTGGGCTGAAAGAATGA+AGG	-	tig0012325:6655-6674	Msa1351590:intergenic	35.0%
	TCATTCTTTCAGCCCAAAAA+TGG	+	tig0012325:6655-6674	Msa1351590:CDS	35.0%
!!	CTTGTGTTCTCTCCATTTTT+GGG	-	tig0012325:6670-6689	Msa1351590:intergenic	35.0%
!	TCTTGTGTTCTCTCCATTTT+TGG	-	tig0012325:6671-6690	Msa1351590:intergenic	35.0%
	TTCATGTTCTCAATGAGACT+TGG	+	tig0012325:6722-6741	Msa1351590:CDS	35.0%
	CTTATAAGCACTTCCTTCTA+TGG	-	tig0012325:6767-6786	Msa1351590:intergenic	35.0%
!!	CATAGAAGGAAGTGCTTATA+AGG	+	tig0012325:6765-6784	Msa1351590:CDS	35.0%
	TATCAATATGCTCTCATTGG+TGG	+	tig0012325:6898-6917	Msa1351590:CDS	35.0%
	ATCAATATGCTCTCATTGGT+GGG	+	tig0012325:6899-6918	Msa1351590:CDS	35.0%
	GGCCTACCAATAAATATCTA+TGG	+	tig0012325:6920-6939	Msa1351590:CDS	35.0%
	GAAAAAGCAACGTTAGAGAT+AGG	-	tig0012325:6955-6974	Msa1351590:intergenic	35.0%
!	AGAGCAAGAAAGATTAGTTG+TGG	+	tig0012325:7118-7137	Msa1351590:intron	35.0%
	CAATCATAGCTAGATTGTCT+TGG	-	tig0012325:7231-7250	Msa1351590:intergenic	35.0%
	AAATTGAGAGTGACCACATT+GGG	-	tig0012325:7411-7430	Msa1351590:intergenic	35.0%
	AAAATTGAGAGTGACCACAT+TGG	-	tig0012325:7412-7431	Msa1351590:intergenic	35.0%
	GAACAACACGAAAACTATGA+AGG	+	tig0012325:7599-7618	Msa1351590:intron	35.0%
	TAGATTGCTTCATCCAAATG+GGG	-	tig0012325:7731-7750	Msa1351590:intergenic	35.0%
	GTAGATTGCTTCATCCAAAT+GGG	-	tig0012325:7732-7751	Msa1351590:intergenic	35.0%
	TGTAGATTGCTTCATCCAAA+TGG	-	tig0012325:7733-7752	Msa1351590:intergenic	35.0%
!!!	AAAAGGCATTTTGTGTCTTG+AGG	-	tig0012325:7851-7870	Msa1351590:intergenic	35.0%
	GTAAATTGCAATGCGTGTAT+TGG	+	tig0012325:8004-8023	Msa1351590:three_prime_UTR	35.0%
	GATCTAGTAGTCGTAGATAA+AGG	-	tig0012325:8208-8227	Msa1351590:intergenic	35.0%
	CAGATTGGAGTAACTTTCCA+AGG	-	tig0012325:6456-6475	None:intergenic	40.0%
	TGTCTCTCTACCTGAAATAG+AGG	+	tig0012325:6515-6534	Msa1351590:five_prime_UTR	40.0%
	CAAAAAATGGGAAACACCGT+AGG	+	tig0012325:6556-6575	Msa1351590:exon	40.0%
!	ATCACTGTTGAGAGTGTATG+TGG	-	tig0012325:6695-6714	Msa1351590:intergenic	40.0%
	ACATACACTCTCAACAGTGA+TGG	+	tig0012325:6694-6713	Msa1351590:CDS	40.0%
	CATACACTCTCAACAGTGAT+GGG	+	tig0012325:6695-6714	Msa1351590:CDS	40.0%
	GTTCTCAATGAGACTTGGAA+TGG	+	tig0012325:6727-6746	Msa1351590:CDS	40.0%
	GGTAAAAGAACCTCCATAGA+AGG	+	tig0012325:6751-6770	Msa1351590:CDS	40.0%
	ATAAGCACTTCCTTCTATGG+AGG	-	tig0012325:6764-6783	Msa1351590:intergenic	40.0%
!!	AGCTTGGCTTCATCACTTTT+GGG	-	tig0012325:6796-6815	Msa1351590:intergenic	40.0%
	GGAATAATTGGCAAGAATGG+AGG	-	tig0012325:6838-6857	Msa1351590:intergenic	40.0%
	GCAGGAATAATTGGCAAGAA+TGG	-	tig0012325:6841-6860	Msa1351590:intergenic	40.0%
	TTGCCAATTATTCCTGCTGT+TGG	+	tig0012325:6844-6863	Msa1351590:CDS	40.0%
	TCTCCAACAGCAGGAATAAT+TGG	-	tig0012325:6850-6869	Msa1351590:intergenic	40.0%
	ATGAAGCTATGACACAGACA+CGG	-	tig0012325:7098-7117	Msa1351590:intergenic	40.0%
!	GGTCACTCTCAATTTTCTTG+CGG	+	tig0012325:7416-7435	Msa1351590:intron	40.0%
	CGTTCCTTCCTACAATAACT+TGG	+	tig0012325:7673-7692	Msa1351590:intron	40.0%
	GTTGAGAAAGCTAAGGAAGA+AGG	+	tig0012325:7761-7780	Msa1351590:CDS	40.0%
	TGAGGACCTTAATCTTACTC+AGG	-	tig0012325:7833-7852	Msa1351590:intergenic	40.0%
!	GAATATCTTTTGCTGACCAG+CGG	+	tig0012325:8166-8185	Msa1351590:three_prime_UTR	40.0%
!	AATATCTTTTGCTGACCAGC+GGG	+	tig0012325:8167-8186	Msa1351590:three_prime_UTR	40.0%
	CTACTAGATCACTCTACACA+TGG	+	tig0012325:8218-8237	Msa1351590:three_prime_UTR	40.0%
	ATGGCTGATGTGGAAAGATA+TGG	+	tig0012325:8237-8256	Msa1351590:three_prime_UTR	40.0%
	TGGCTGATGTGGAAAGATAT+GGG	+	tig0012325:8238-8257	Msa1351590:three_prime_UTR	40.0%
	TGATGTGGAAAGATATGGGT+AGG	+	tig0012325:8242-8261	Msa1351590:three_prime_UTR	40.0%
	GATGTGGAAAGATATGGGTA+GGG	+	tig0012325:8243-8262	Msa1351590:three_prime_UTR	40.0%
	ATGTGGAAAGATATGGGTAG+GGG	+	tig0012325:8244-8263	Msa1351590:three_prime_UTR	40.0%
	CAGATTGGAGTAACTTTCCA+AGG	-	tig0012325:6456-6475	Msa1351590:intergenic	40.0%
	TGTCTCTCTACCTGAAATAG+AGG	+	tig0012325:6515-6534	Msa1351590:five_prime_UTR	40.0%
	CAAAAAATGGGAAACACCGT+AGG	+	tig0012325:6556-6575	Msa1351590:exon	40.0%
!	ATCACTGTTGAGAGTGTATG+TGG	-	tig0012325:6695-6714	Msa1351590:intergenic	40.0%
	ACATACACTCTCAACAGTGA+TGG	+	tig0012325:6694-6713	Msa1351590:CDS	40.0%
	CATACACTCTCAACAGTGAT+GGG	+	tig0012325:6695-6714	Msa1351590:CDS	40.0%
	GTTCTCAATGAGACTTGGAA+TGG	+	tig0012325:6727-6746	Msa1351590:CDS	40.0%
	GGTAAAAGAACCTCCATAGA+AGG	+	tig0012325:6751-6770	Msa1351590:CDS	40.0%
	ATAAGCACTTCCTTCTATGG+AGG	-	tig0012325:6764-6783	Msa1351590:intergenic	40.0%
!!	AGCTTGGCTTCATCACTTTT+GGG	-	tig0012325:6796-6815	Msa1351590:intergenic	40.0%
	GGAATAATTGGCAAGAATGG+AGG	-	tig0012325:6838-6857	Msa1351590:intergenic	40.0%
	GCAGGAATAATTGGCAAGAA+TGG	-	tig0012325:6841-6860	Msa1351590:intergenic	40.0%
	TTGCCAATTATTCCTGCTGT+TGG	+	tig0012325:6844-6863	Msa1351590:CDS	40.0%
	TCTCCAACAGCAGGAATAAT+TGG	-	tig0012325:6850-6869	Msa1351590:intergenic	40.0%
	ATGAAGCTATGACACAGACA+CGG	-	tig0012325:7098-7117	Msa1351590:intergenic	40.0%
!	GGTCACTCTCAATTTTCTTG+CGG	+	tig0012325:7416-7435	Msa1351590:intron	40.0%
	CGTTCCTTCCTACAATAACT+TGG	+	tig0012325:7673-7692	Msa1351590:intron	40.0%
	GTTGAGAAAGCTAAGGAAGA+AGG	+	tig0012325:7761-7780	Msa1351590:CDS	40.0%
	TGAGGACCTTAATCTTACTC+AGG	-	tig0012325:7833-7852	Msa1351590:intergenic	40.0%
!	GAATATCTTTTGCTGACCAG+CGG	+	tig0012325:8166-8185	Msa1351590:three_prime_UTR	40.0%
!	AATATCTTTTGCTGACCAGC+GGG	+	tig0012325:8167-8186	Msa1351590:three_prime_UTR	40.0%
	CTACTAGATCACTCTACACA+TGG	+	tig0012325:8218-8237	Msa1351590:three_prime_UTR	40.0%
	ATGGCTGATGTGGAAAGATA+TGG	+	tig0012325:8237-8256	Msa1351590:three_prime_UTR	40.0%
	TGGCTGATGTGGAAAGATAT+GGG	+	tig0012325:8238-8257	Msa1351590:three_prime_UTR	40.0%
	TGATGTGGAAAGATATGGGT+AGG	+	tig0012325:8242-8261	Msa1351590:three_prime_UTR	40.0%
	GATGTGGAAAGATATGGGTA+GGG	+	tig0012325:8243-8262	Msa1351590:three_prime_UTR	40.0%
	ATGTGGAAAGATATGGGTAG+GGG	+	tig0012325:8244-8263	Msa1351590:three_prime_UTR	40.0%
	AAGGACAAGGAGGTTGTGAA+GGG	+	tig0012325:6580-6599	Msa1351590:CDS	45.0%
!	TGTAGACTTGGAGAGGTACA+TGG	+	tig0012325:6603-6622	Msa1351590:CDS	45.0%
!	GTAGACTTGGAGAGGTACAT+GGG	+	tig0012325:6604-6623	Msa1351590:CDS	45.0%
	CTCAATGAGACTTGGAATGG+TGG	+	tig0012325:6730-6749	Msa1351590:CDS	45.0%
!!	GCTTGGCTTCATCACTTTTG+GGG	-	tig0012325:6795-6814	Msa1351590:intergenic	45.0%
!	GAGCTTGGCTTCATCACTTT+TGG	-	tig0012325:6797-6816	Msa1351590:intergenic	45.0%
	AAGTGATGAAGCCAAGCTCA+AGG	+	tig0012325:6798-6817	Msa1351590:CDS	45.0%
	TTCCTGCTGTTGGAGATTAC+TGG	+	tig0012325:6854-6873	Msa1351590:CDS	45.0%
	ATCCAGTAATCTCCAACAGC+AGG	-	tig0012325:6859-6878	Msa1351590:intergenic	45.0%
	CACATGTGTGGGATGTAACT+TGG	-	tig0012325:7002-7021	Msa1351590:intergenic	45.0%
	TTGGTCCCTAGATACTATGC+AGG	+	tig0012325:7702-7721	Msa1351590:intron	45.0%
	GGTTGCCTGCATAGTATCTA+GGG	-	tig0012325:7710-7729	Msa1351590:intergenic	45.0%
!	CCTTAGCTTTCTCAACAAGC+TGG	-	tig0012325:7757-7776	Msa1351590:intergenic	45.0%
!!	CCAGCTTGTTGAGAAAGCTA+AGG	+	tig0012325:7754-7773	Msa1351590:CDS	45.0%
	CCTTAATCTTACTCAGGTGG+AGG	-	tig0012325:7827-7846	Msa1351590:intergenic	45.0%
	CCTCCACCTGAGTAAGATTA+AGG	+	tig0012325:7824-7843	Msa1351590:exon	45.0%
	GGACCTTAATCTTACTCAGG+TGG	-	tig0012325:7830-7849	Msa1351590:intergenic	45.0%
!	ATATCTTTTGCTGACCAGCG+GGG	+	tig0012325:8168-8187	Msa1351590:three_prime_UTR	45.0%
	TGTGGAAAGATATGGGTAGG+GGG	+	tig0012325:8245-8264	Msa1351590:three_prime_UTR	45.0%
	AAGGACAAGGAGGTTGTGAA+GGG	+	tig0012325:6580-6599	Msa1351590:CDS	45.0%
!	TGTAGACTTGGAGAGGTACA+TGG	+	tig0012325:6603-6622	Msa1351590:CDS	45.0%
!	GTAGACTTGGAGAGGTACAT+GGG	+	tig0012325:6604-6623	Msa1351590:CDS	45.0%
	CTCAATGAGACTTGGAATGG+TGG	+	tig0012325:6730-6749	Msa1351590:CDS	45.0%
!!	GCTTGGCTTCATCACTTTTG+GGG	-	tig0012325:6795-6814	Msa1351590:intergenic	45.0%
!	GAGCTTGGCTTCATCACTTT+TGG	-	tig0012325:6797-6816	Msa1351590:intergenic	45.0%
	AAGTGATGAAGCCAAGCTCA+AGG	+	tig0012325:6798-6817	Msa1351590:CDS	45.0%
	TTCCTGCTGTTGGAGATTAC+TGG	+	tig0012325:6854-6873	Msa1351590:CDS	45.0%
	ATCCAGTAATCTCCAACAGC+AGG	-	tig0012325:6859-6878	Msa1351590:intergenic	45.0%
	CACATGTGTGGGATGTAACT+TGG	-	tig0012325:7002-7021	Msa1351590:intergenic	45.0%
	TTGGTCCCTAGATACTATGC+AGG	+	tig0012325:7702-7721	Msa1351590:intron	45.0%
	GGTTGCCTGCATAGTATCTA+GGG	-	tig0012325:7710-7729	Msa1351590:intergenic	45.0%
!	CCTTAGCTTTCTCAACAAGC+TGG	-	tig0012325:7757-7776	Msa1351590:intergenic	45.0%
!!	CCAGCTTGTTGAGAAAGCTA+AGG	+	tig0012325:7754-7773	Msa1351590:CDS	45.0%
	CCTTAATCTTACTCAGGTGG+AGG	-	tig0012325:7827-7846	Msa1351590:intergenic	45.0%
	CCTCCACCTGAGTAAGATTA+AGG	+	tig0012325:7824-7843	Msa1351590:exon	45.0%
	GGACCTTAATCTTACTCAGG+TGG	-	tig0012325:7830-7849	Msa1351590:intergenic	45.0%
!	ATATCTTTTGCTGACCAGCG+GGG	+	tig0012325:8168-8187	Msa1351590:three_prime_UTR	45.0%
	TGTGGAAAGATATGGGTAGG+GGG	+	tig0012325:8245-8264	Msa1351590:three_prime_UTR	45.0%
	AATGGGAAACACCGTAGGGA+AGG	+	tig0012325:6561-6580	Msa1351590:exon	50.0%
	AAACACCGTAGGGAAGGACA+AGG	+	tig0012325:6567-6586	Msa1351590:CDS	50.0%
	AACCTCCTTGTCCTTCCCTA+CGG	-	tig0012325:6575-6594	Msa1351590:intergenic	50.0%
	GAAGGACAAGGAGGTTGTGA+AGG	+	tig0012325:6579-6598	Msa1351590:CDS	50.0%
!	GGTTGTGAAGGGTGTAGACT+TGG	+	tig0012325:6591-6610	Msa1351590:CDS	50.0%
!	TGAAGGGTGTAGACTTGGAG+AGG	+	tig0012325:6596-6615	Msa1351590:CDS	50.0%
!	ACTTGGAGAGGTACATGGGT+AGG	+	tig0012325:6608-6627	Msa1351590:CDS	50.0%
	TAGAGAGTGAACGCCCAATG+TGG	+	tig0012325:7395-7414	Msa1351590:intron	50.0%
	GGGTTGCCTGCATAGTATCT+AGG	-	tig0012325:7711-7730	Msa1351590:intergenic	50.0%
	ACTATGCAGGCAACCCCATT+TGG	+	tig0012325:7715-7734	Msa1351590:CDS	50.0%
	ATAAATCATGGGATCCCCGC+TGG	-	tig0012325:8185-8204	Msa1351590:intergenic	50.0%
	CACTCTACACATGGCTGATG+TGG	+	tig0012325:8227-8246	Msa1351590:three_prime_UTR	50.0%
	AATGGGAAACACCGTAGGGA+AGG	+	tig0012325:6561-6580	Msa1351590:exon	50.0%
	AAACACCGTAGGGAAGGACA+AGG	+	tig0012325:6567-6586	Msa1351590:CDS	50.0%
	AACCTCCTTGTCCTTCCCTA+CGG	-	tig0012325:6575-6594	Msa1351590:intergenic	50.0%
	GAAGGACAAGGAGGTTGTGA+AGG	+	tig0012325:6579-6598	Msa1351590:CDS	50.0%
!	GGTTGTGAAGGGTGTAGACT+TGG	+	tig0012325:6591-6610	Msa1351590:CDS	50.0%
!	TGAAGGGTGTAGACTTGGAG+AGG	+	tig0012325:6596-6615	Msa1351590:CDS	50.0%
!	ACTTGGAGAGGTACATGGGT+AGG	+	tig0012325:6608-6627	Msa1351590:CDS	50.0%
	TAGAGAGTGAACGCCCAATG+TGG	+	tig0012325:7395-7414	Msa1351590:intron	50.0%
	GGGTTGCCTGCATAGTATCT+AGG	-	tig0012325:7711-7730	Msa1351590:intergenic	50.0%
	ACTATGCAGGCAACCCCATT+TGG	+	tig0012325:7715-7734	Msa1351590:CDS	50.0%
	ATAAATCATGGGATCCCCGC+TGG	-	tig0012325:8185-8204	Msa1351590:intergenic	50.0%
	CACTCTACACATGGCTGATG+TGG	+	tig0012325:8227-8246	Msa1351590:three_prime_UTR	50.0%
!	TGGAGAGGTACATGGGTAGG+TGG	+	tig0012325:6611-6630	Msa1351590:CDS	55.0%
	TCAGGTGGAGGATCACTCTG+TGG	-	tig0012325:7815-7834	Msa1351590:intergenic	55.0%
!	TGGAGAGGTACATGGGTAGG+TGG	+	tig0012325:6611-6630	Msa1351590:CDS	55.0%
	TCAGGTGGAGGATCACTCTG+TGG	-	tig0012325:7815-7834	Msa1351590:intergenic	55.0%
	CACCGTAGGGAAGGACAAGG+AGG	+	tig0012325:6570-6589	Msa1351590:CDS	60.0%
	CACCGTAGGGAAGGACAAGG+AGG	+	tig0012325:6570-6589	Msa1351590:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0012325	gene	6442	8347	6442	ID=Msa1351590;Name=Msa1351590
tig0012325	mRNA	6442	8347	6442	ID=Msa1351590-mRNA-1;Parent=Msa1351590;Name=Msa1351590-mRNA-1;_AED=0.29;_eAED=0.29;_QI=120\|1\|1\|1\|1\|1\|2\|509\|168
tig0012325	exon	6442	6942	6442	ID=Msa1351590-mRNA-1:exon:7786;Parent=Msa1351590-mRNA-1
tig0012325	exon	7713	8347	7713	ID=Msa1351590-mRNA-1:exon:7787;Parent=Msa1351590-mRNA-1
tig0012325	five_prime_UTR	6442	6561	6442	ID=Msa1351590-mRNA-1:five_prime_utr;Parent=Msa1351590-mRNA-1
tig0012325	CDS	6562	6942	6562	ID=Msa1351590-mRNA-1:cds;Parent=Msa1351590-mRNA-1
tig0012325	CDS	7713	7838	7713	ID=Msa1351590-mRNA-1:cds;Parent=Msa1351590-mRNA-1
tig0012325	three_prime_UTR	7839	8347	7839	ID=Msa1351590-mRNA-1:three_prime_utr;Parent=Msa1351590-mRNA-1

Gene Sequence

>Msa1351590

ATGGGAAACACCGTAGGGAAGGACAAGGAGGTTGTGAAGGGTGTAGACTTGGAGAGGTACATGGGTAGGTGGTATGAGATAGCTTCTTTCCCTTCATTCTTTCAGCCCAAAAATGGAGAGAACACAAGAGCCACATACACTCTCAACAGTGATGGGACTGTTCATGTTCTCAATGAGACTTGGAATGGTGGTAAAAGAACCTCCATAGAAGGAAGTGCTTATAAGGCTGACCCCAAAAGTGATGAAGCCAAGCTCAAGGTTAAATTCTATGTTCCTCCATTCTTGCCAATTATTCCTGCTGTTGGAGATTACTGGATTTTGTACCTTGATCAAGATTATCAATATGCTCTCATTGGTGGGCCTACCAATAAATATCTATGGATACTATGCAGGCAACCCCATTTGGATGAAGCAATCTACAACCAGCTTGTTGAGAAAGCTAAGGAAGAAGGTTATGATGTGAGTAAATTGCACAAGACTCCACAGAGTGATCCTCCACCTGAGTAA

Protein sequence

>Msa1351590

MGNTVGKDKEVVKGVDLERYMGRWYEIASFPSFFQPKNGENTRATYTLNSDGTVHVLNETWNGGKRTSIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPAVGDYWILYLDQDYQYALIGGPTNKYLWILCRQPHLDEAIYNQLVEKAKEEGYDVSKLHKTPQSDPPPE*