AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0416880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416880 MtrunA17_Chr3g0113901 95.336 879 30 1 1 879 1 868 0.0 1731
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416880 AT3G56040.1 62.275 888 310 10 3 878 5 879 0.0 1083

Find 242 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATTCTCTTTCATTATTA+AGG 0.102246 3_2:-63937220 Msa0416880:three_prime_UTR
CCTAGCTAGTCCAGCATTTC+TGG 0.108905 3_2:+63945356 None:intergenic
ATCCTGCTCTTGGTCCTCTT+TGG 0.182867 3_2:-63939329 Msa0416880:CDS
GATTGCATTGGAGGAGTAAT+TGG 0.185925 3_2:-63945042 Msa0416880:CDS
GGAAATTCTGGTGGTGGTTT+TGG 0.204275 3_2:-63945141 Msa0416880:CDS
TTCTTGTACTTCAAGTTATA+TGG 0.249345 3_2:-63943494 Msa0416880:CDS
AGCTACTGATGTTGTCTTAC+AGG 0.251449 3_2:-63938301 Msa0416880:intron
ACGTTGCAGTTATCAGATTA+TGG 0.263325 3_2:-63944057 Msa0416880:intron
CTTCTAGGGTTTGCCAGACC+TGG 0.263501 3_2:-63943784 Msa0416880:intron
CGTTGATGATTCGAAGCTTT+TGG 0.263663 3_2:+63945415 None:intergenic
CAGTTATCAGATTATGGTTC+TGG 0.272663 3_2:-63944051 Msa0416880:CDS
ATGCATCTCAAGCCGCTCTA+TGG 0.274293 3_2:-63943899 Msa0416880:CDS
TACACTGAATTCGACAAGTT+TGG 0.277224 3_2:-63941697 Msa0416880:CDS
TAGAGGTTGCAGAGCTCTTT+TGG 0.277245 3_2:-63938778 Msa0416880:CDS
AGTGAAAGAAGGCCAAATTT+TGG 0.278373 3_2:-63943967 Msa0416880:CDS
TCCTGCTCTTGGTCCTCTTT+GGG 0.282075 3_2:-63939328 Msa0416880:CDS
TGGCGACTTACAACAGAAAA+TGG 0.283321 3_2:+63937151 None:intergenic
GACAAGTTTGGGATTACTAA+TGG 0.289277 3_2:-63941685 Msa0416880:CDS
TTTCCTGTAATTATATTATT+GGG 0.295994 3_2:-63937308 Msa0416880:three_prime_UTR
GGGTATCGATTCCCAAAATT+TGG 0.297714 3_2:+63943955 None:intergenic
GAGTCGTCGGTGATGGCTTC+TGG 0.302435 3_2:-63945225 Msa0416880:CDS
CCAGATGGCAACTGGGAATA+TGG 0.302770 3_2:-63941736 Msa0416880:CDS
GATGAGAACTACGTTTATTC+AGG 0.303262 3_2:-63939375 Msa0416880:CDS
AGAGAAAACGGTGGTGATTA+TGG 0.310242 3_2:+63945712 None:intergenic
CAATTCTCTTTCATTATTAA+GGG 0.311871 3_2:-63937219 Msa0416880:three_prime_UTR
CAGCCTCTTGTTCCGGTTGT+CGG 0.319576 3_2:-63943259 Msa0416880:CDS
TAACTCAGAGCCCTTCGATA+TGG 0.328209 3_2:+63938805 None:intergenic
GACACCTGATGGTGCTCTAT+TGG 0.328369 3_2:-63939696 Msa0416880:CDS
ATCCTTCTTCATCCTGCTCT+TGG 0.330716 3_2:-63939339 Msa0416880:CDS
TTTGTATTTAACACCATTCC+TGG 0.335076 3_2:+63940886 None:intergenic
CCTGGGTGAAATTTATCCTT+TGG 0.336683 3_2:-63943766 Msa0416880:CDS
ATCGACGCTGCGGTTGGATT+CGG 0.338258 3_2:-63945328 Msa0416880:CDS
CCTTTGTCCATGATGCAGTA+TGG 0.344222 3_2:+63938584 None:intergenic
AGAAATGTCCAGATGGCAAC+TGG 0.346060 3_2:-63941744 Msa0416880:CDS
AAGGGAATTGATTGGAGTTA+TGG 0.349546 3_2:-63938402 Msa0416880:CDS
CAACCCAATAATATAATTAC+AGG 0.350203 3_2:+63937305 None:intergenic
GAGACCAGTTTGTATTCTTC+CGG 0.352518 3_2:+63944003 None:intergenic
ATTTCAATTCATATTCATAT+AGG 0.353173 3_2:-63940320 Msa0416880:CDS
TATAAGATGTTTGTATTAGC+TGG 0.355473 3_2:+63940964 None:intergenic
CTAATGGATCTCTTCCAAAA+AGG 0.356361 3_2:-63941669 Msa0416880:intron
ACACTGAATTCGACAAGTTT+GGG 0.356446 3_2:-63941696 Msa0416880:CDS
CAATAACGACGGACCTAACT+TGG 0.361322 3_2:+63943092 None:intergenic
GATTCTGGTAATGGAAATTC+TGG 0.364009 3_2:-63945153 Msa0416880:CDS
AGGTCTTATAAGAGATCTTC+AGG 0.365034 3_2:-63943649 Msa0416880:intron
ATTTCTACAATCAAGTTTGC+AGG 0.365245 3_2:-63940995 Msa0416880:intron
GTTAAGAGACCTGGGCTTCC+CGG 0.366012 3_2:+63937750 None:intergenic
TGCGAAACACTCTCTTGGTT+TGG 0.366793 3_2:-63943398 Msa0416880:CDS
CTGGGTGAAATTTATCCTTT+GGG 0.366993 3_2:-63943765 Msa0416880:CDS
ATAAATTATGTAGATCAGTT+TGG 0.370232 3_2:-63940856 Msa0416880:CDS
ATCTTCAATTTGTATCCATC+TGG 0.370939 3_2:+63937777 None:intergenic
GAACTTGTCATTATTGCAAC+AGG 0.373163 3_2:+63943455 None:intergenic
GTTCAAAGATATTTCACAAC+TGG 0.375155 3_2:+63937097 None:intergenic
ATGATTGAGAAGATGGATTC+TGG 0.376036 3_2:-63945168 Msa0416880:CDS
AGTTCAACCTTTGTGATGTT+AGG 0.378041 3_2:-63937397 Msa0416880:three_prime_UTR
TTACCATCTGCGGAGCTTGT+TGG 0.380348 3_2:-63940934 Msa0416880:CDS
CCTCTTCAATCGGATCTAAC+TGG 0.384754 3_2:+63937603 None:intergenic
CAAGAGCATGTGTTGTGTTC+GGG 0.388421 3_2:-63945267 Msa0416880:CDS
GTTTGGAGGATCATGAAATT+CGG 0.388697 3_2:-63945113 Msa0416880:CDS
TCAAGAGCATGTGTTGTGTT+CGG 0.394898 3_2:-63945268 Msa0416880:CDS
TTCTGTTCAACCTGTCATCT+TGG 0.396523 3_2:+63937419 None:intergenic
AAGAGCTTGTGAATATTTGA+TGG 0.396551 3_2:+63937179 None:intergenic
CCATCTTCTGCACCGACAAC+CGG 0.396774 3_2:+63943247 None:intergenic
TTGGTAGTAGAAATTATTAT+AGG 0.397873 3_2:+63937438 None:intergenic
GTGCAACTGTGCGCCAAGTT+AGG 0.402271 3_2:-63943105 Msa0416880:intron
GGAACTTATTGTCCAACAAT+TGG 0.403417 3_2:-63944030 Msa0416880:CDS
TTTGGAGGATCATGAAATTC+GGG 0.407427 3_2:-63945112 Msa0416880:CDS
GTAACCCTCCTGGCCTTAGC+AGG 0.407592 3_2:-63942964 Msa0416880:CDS
CCGGTTGTCGGTGCAGAAGA+TGG 0.414770 3_2:-63943247 Msa0416880:CDS
CCATATTCCCAGTTGCCATC+TGG 0.416223 3_2:+63941736 None:intergenic
ATCACGGAGGGAGGTGAGTC+TGG 0.417202 3_2:+63945464 None:intergenic
ACGGCAGCATTGCAGCAGGC+AGG 0.417616 3_2:+63943694 None:intergenic
CCCTGTGCGAAACACTCTCT+TGG 0.421940 3_2:-63943403 Msa0416880:CDS
TTGGGAATCGATACCCCTAC+TGG 0.432327 3_2:-63943948 Msa0416880:CDS
GCATCCTGTGACCGTGTCTC+AGG 0.434355 3_2:-63941799 Msa0416880:CDS
TTCGCGGCGGAAATTGAATC+CGG 0.435076 3_2:+63945491 None:intergenic
GAATTGGCAGCCTCTTGTTC+CGG 0.436440 3_2:-63943266 Msa0416880:intron
CACTGGGATTACAAGATAGA+AGG 0.441388 3_2:-63937557 Msa0416880:CDS
TTCTAGGGTTTGCCAGACCT+GGG 0.443387 3_2:-63943783 Msa0416880:intron
TTCAGTCCCTTGAGCAAGCC+TGG 0.446802 3_2:-63943202 Msa0416880:CDS
TGCATCTCAAGCCGCTCTAT+GGG 0.456669 3_2:-63943898 Msa0416880:CDS
CAGCGTCTCTGGTGGCAGAC+TGG 0.457973 3_2:-63940373 Msa0416880:CDS
GTCGGTGATGGCTTCTGGTT+CGG 0.459134 3_2:-63945220 Msa0416880:CDS
TGTTGAACAAGGGAATTGAT+TGG 0.459763 3_2:-63938410 Msa0416880:CDS
GGATAAATTTCACCCAGGTC+TGG 0.462592 3_2:+63943771 None:intergenic
CGGAAATTGAATCCGGGAGG+TGG 0.466176 3_2:+63945498 None:intergenic
GCTTGACCTTTCTGAAAATA+CGG 0.468467 3_2:-63943925 Msa0416880:CDS
TTGTATATAATGAGCGGAGA+AGG 0.469118 3_2:-63940169 Msa0416880:CDS
GGCGAAGATGATTGAGAAGA+TGG 0.469555 3_2:-63945175 Msa0416880:CDS
TACAGAGTGAGACGTTTCTT+CGG 0.471842 3_2:-63945387 Msa0416880:CDS
TCTTCCGGTCAACCAATTGT+TGG 0.474192 3_2:+63944018 None:intergenic
CCAGAAATGCTGGACTAGCT+AGG 0.474822 3_2:-63945356 Msa0416880:CDS
TGGACAGTGGAAGCTGGCAC+TGG 0.475964 3_2:-63937574 Msa0416880:CDS
GAGAAGATGGATTCTGGTAA+TGG 0.475984 3_2:-63945162 Msa0416880:CDS
ATTGCATTGGAGGAGTAATT+GGG 0.476083 3_2:-63945041 Msa0416880:intron
TTGAGCAAGCCTGGTGGTCA+TGG 0.479896 3_2:-63943193 Msa0416880:CDS
AGGTTCTATGATTGCATTGG+AGG 0.481250 3_2:-63945051 Msa0416880:CDS
CAAAACGGCAGCATTGCAGC+AGG 0.483983 3_2:+63943690 None:intergenic
GGTTCCTCTTCCAGAAATGC+TGG 0.486444 3_2:-63945366 Msa0416880:CDS
ATGACAAAGGCATCTTCAAA+TGG 0.486723 3_2:-63943150 Msa0416880:CDS
TGTGGGAGGACTTTGTTGGA+AGG 0.487462 3_2:-63943669 Msa0416880:CDS
GAAGAAGAAGAAGATGAAGA+TGG 0.489866 3_2:+63945606 None:intergenic
TATTCATATAGGTGCTATAG+TGG 0.490308 3_2:-63940309 Msa0416880:CDS
ATTCCAGGTCAATGGAAGCC+TGG 0.492278 3_2:-63938661 Msa0416880:intron
TCCGATTGAAGAGGGTATGA+TGG 0.493068 3_2:-63937594 Msa0416880:CDS
GGATGAAGAAGGATAAGAAA+AGG 0.497249 3_2:+63939348 None:intergenic
GTTACTTTGCTAGGTGTGGA+AGG 0.501000 3_2:-63938455 Msa0416880:intron
TCCATCATACCCTCTTCAAT+CGG 0.501357 3_2:+63937593 None:intergenic
AACCGATCCCTGCTAAGGCC+AGG 0.504929 3_2:+63942956 None:intergenic
GAGAGGTTCTATGATTGCAT+TGG 0.505264 3_2:-63945054 Msa0416880:CDS
AACGAAAAGAAAAGAGAAAA+CGG 0.505393 3_2:+63945700 None:intergenic
CAGAAAGGTCAAGCCCAGTA+GGG 0.506685 3_2:+63943934 None:intergenic
AAGACATCCGATGTAGTTAG+TGG 0.507493 3_2:+63937499 None:intergenic
GGAGATGGAGTCGTCGGTGA+TGG 0.507944 3_2:-63945232 Msa0416880:CDS
TTGTCCAACAATTGGTTGAC+CGG 0.510009 3_2:-63944022 Msa0416880:CDS
GATGTCTTCTGCGTGAATCA+TGG 0.510412 3_2:-63937484 Msa0416880:three_prime_UTR
AAGATCATGCCGGGAAGCCC+AGG 0.511110 3_2:-63937759 Msa0416880:intron
GGGCTCTGAGTTACAAATAG+AGG 0.511590 3_2:-63938795 Msa0416880:CDS
CGGTTGTCGGTGCAGAAGAT+GGG 0.511615 3_2:-63943246 Msa0416880:CDS
ACAGGGAAGTGATGTGTTTG+TGG 0.514804 3_2:+63943420 None:intergenic
GATTTAGTTGATCCTAGCAC+TGG 0.516777 3_2:-63943723 Msa0416880:CDS
GGTAATGGAAATTCTGGTGG+TGG 0.517348 3_2:-63945147 Msa0416880:CDS
CAGAAATGCTGGACTAGCTA+GGG 0.518323 3_2:-63945355 Msa0416880:CDS
AAGTGAAGTGGAGTGAAGCA+TGG 0.519601 3_2:+63945740 None:intergenic
CTCCTGGCCTTAGCAGGGAT+CGG 0.519753 3_2:-63942958 Msa0416880:CDS
GGAATTGATTGGAGTTATGG+TGG 0.522616 3_2:-63938399 Msa0416880:CDS
AGAAGGAATTAATGTACTGA+TGG 0.523885 3_2:-63941770 Msa0416880:CDS
AACAAAGTCCTCCCACAAAA+CGG 0.525949 3_2:+63943675 None:intergenic
ACACTCTCTTGGTTTGGAAG+AGG 0.526496 3_2:-63943392 Msa0416880:CDS
ATCACCGACGACTCCATCTC+CGG 0.526576 3_2:+63945234 None:intergenic
AAATTGAATCCGGGAGGTGG+TGG 0.528692 3_2:+63945501 None:intergenic
TTATGGTGGTTCCATATCGA+AGG 0.530568 3_2:-63938816 Msa0416880:CDS
GGGAGAAACTATGCCGGAGA+TGG 0.533169 3_2:-63945247 Msa0416880:CDS
ACCAAGAGAGTGTTTCGCAC+AGG 0.533505 3_2:+63943402 None:intergenic
TCCCAAAGAGGACCAAGAGC+AGG 0.537439 3_2:+63939327 None:intergenic
TGTATATAATGAGCGGAGAA+GGG 0.539015 3_2:-63940168 Msa0416880:CDS
AGCTACAGATGTAACCCTCC+TGG 0.539348 3_2:-63942974 Msa0416880:CDS
CATATGACACCATGACCACC+AGG 0.543397 3_2:+63943184 None:intergenic
AAATGTCAAGGTGTTGAACA+AGG 0.544203 3_2:-63938421 Msa0416880:CDS
TACAAATTGAAGATCATGCC+GGG 0.544898 3_2:-63937768 Msa0416880:CDS
AGGAGGGTTACATCTGTAGC+TGG 0.545372 3_2:+63942976 None:intergenic
TAGTCCAGCATTTCTGGAAG+AGG 0.546073 3_2:+63945362 None:intergenic
CACATGCACGAAGTGAAAGA+AGG 0.547067 3_2:-63943978 Msa0416880:CDS
ATTGGAAACATGATGTGAAA+AGG 0.548474 3_2:-63938368 Msa0416880:CDS
TCAGAAAGGTCAAGCCCAGT+AGG 0.548530 3_2:+63943933 None:intergenic
GTATGATGGACAGTGGAAGC+TGG 0.551683 3_2:-63937580 Msa0416880:CDS
AGCCGCTCTATGGGGTATAG+AGG 0.552596 3_2:-63943889 Msa0416880:intron
ATATGTTGATTTACCATCTG+CGG 0.552956 3_2:-63940944 Msa0416880:CDS
GAATTATCACCACCACCTCC+CGG 0.556730 3_2:-63945510 Msa0416880:CDS
GGTGAAATTTATCCTTTGGG+AGG 0.556891 3_2:-63943762 Msa0416880:CDS
TGGAGACAAGTCTTTACGCC+AGG 0.557037 3_2:-63940114 Msa0416880:intron
ATTTCTACTACCAAGATGAC+AGG 0.557413 3_2:-63937429 Msa0416880:three_prime_UTR
GGCTTGCTCAAGGGACTGAA+CGG 0.558446 3_2:+63943205 None:intergenic
ATATCCAATAGAGCACCATC+AGG 0.558512 3_2:+63939692 None:intergenic
CTGGTGGTCATGGTGTCATA+TGG 0.558729 3_2:-63943183 Msa0416880:CDS
CATGTATTTGAAGTTCCAGA+TGG 0.559336 3_2:-63937792 Msa0416880:CDS
GACCAAGAGCAGGATGAAGA+AGG 0.559973 3_2:+63939337 None:intergenic
TGTGAATAGTATACCAGGAA+TGG 0.560350 3_2:-63940899 Msa0416880:CDS
TTGACCGGAAGAATACAAAC+TGG 0.564865 3_2:-63944007 Msa0416880:CDS
GAATAAGTTGTTAGAGACGT+TGG 0.565230 3_2:-63945085 Msa0416880:CDS
GCAGGGATCGGTTTGCGTCA+AGG 0.565919 3_2:-63942946 Msa0416880:CDS
TGGGAATCGATACCCCTACT+GGG 0.567615 3_2:-63943947 Msa0416880:CDS
GTTATGGTGGAAACGTGTAT+TGG 0.569191 3_2:-63938386 Msa0416880:CDS
TGCACCTGAGACACGGTCAC+AGG 0.569781 3_2:+63941795 None:intergenic
CCAAGAGAGTGTTTCGCACA+GGG 0.570420 3_2:+63943403 None:intergenic
TATGGTGGTTCCATATCGAA+GGG 0.572962 3_2:-63938815 Msa0416880:CDS
CGCATGCGGCGAGCTTATCA+CGG 0.573890 3_2:+63945448 None:intergenic
AGGTGAGTCTGGTGATTTCG+CGG 0.574340 3_2:+63945475 None:intergenic
ACGCAAACCGATCCCTGCTA+AGG 0.575284 3_2:+63942951 None:intergenic
AAGAATGTGAATAGTATACC+AGG 0.575840 3_2:-63940904 Msa0416880:CDS
TTGAAGTGTTTGGTAGCTGC+GGG 0.576265 3_2:-63945291 Msa0416880:CDS
AGGTGCTATAGTGGTGTGGA+AGG 0.576552 3_2:-63940300 Msa0416880:intron
GCGTATTTCTACAGAACCAT+TGG 0.578585 3_2:-63945532 Msa0416880:CDS
GACATTCAAACACATGAACC+TGG 0.578832 3_2:+63937131 None:intergenic
TCGCGGCGGAAATTGAATCC+GGG 0.579207 3_2:+63945492 None:intergenic
TGCAGAAGATGGGCAGTGGT+TGG 0.579965 3_2:-63943236 Msa0416880:CDS
GTGCCTGTATAACAGAAACT+GGG 0.580176 3_2:-63941826 Msa0416880:intron
CTTCTGTTGCACCTGAGACA+CGG 0.581858 3_2:+63941788 None:intergenic
ATGACCACCAGGCTTGCTCA+AGG 0.585469 3_2:+63943195 None:intergenic
GATCGGTTTGCGTCAAGGAA+AGG 0.586389 3_2:-63942941 Msa0416880:intron
ATTGAGAGGAATGCAAGCAA+TGG 0.586548 3_2:-63937258 Msa0416880:three_prime_UTR
AGACGTTGGCGCAAGTTGAG+AGG 0.588652 3_2:-63945071 Msa0416880:CDS
TGGAAACTTGCTCATGACAA+AGG 0.591446 3_2:-63943163 Msa0416880:CDS
GGTGAATCCATACTGCATCA+TGG 0.593733 3_2:-63938591 Msa0416880:CDS
CAGTTAGATCCGATTGAAGA+GGG 0.593908 3_2:-63937602 Msa0416880:CDS
CGTGTCTCAGGTGCAACAGA+AGG 0.594843 3_2:-63941787 Msa0416880:CDS
GGCAGGCATTCACCAGTGCT+AGG 0.597638 3_2:+63943711 None:intergenic
GTGTAAATTGCAAAATGTCA+AGG 0.599689 3_2:-63938433 Msa0416880:CDS
CCAGTTAGATCCGATTGAAG+AGG 0.600084 3_2:-63937603 Msa0416880:CDS
GCACCGACAACCGGAACAAG+AGG 0.600784 3_2:+63943256 None:intergenic
TGCGGCGAGCTTATCACGGA+GGG 0.601748 3_2:+63945452 None:intergenic
ATTATGGTGAAGAAGTGAAG+TGG 0.608533 3_2:+63945728 None:intergenic
GATCCAACAAGCTCCGCAGA+TGG 0.609291 3_2:+63940931 None:intergenic
TGACCACCAGGCTTGCTCAA+GGG 0.609355 3_2:+63943196 None:intergenic
TGTCTGGTGACTTCCCAAAG+AGG 0.610893 3_2:+63939315 None:intergenic
GAAGAGGGTATGATGGACAG+TGG 0.615392 3_2:-63937587 Msa0416880:CDS
GGACAGTGGAAGCTGGCACT+GGG 0.616854 3_2:-63937573 Msa0416880:CDS
GTTGAAGTGTTTGGTAGCTG+CGG 0.617732 3_2:-63945292 Msa0416880:CDS
ATACAAATTGAAGATCATGC+CGG 0.618307 3_2:-63937769 Msa0416880:CDS
GAAATGTCCAGATGGCAACT+GGG 0.618954 3_2:-63941743 Msa0416880:CDS
TAACCCTCCTGGCCTTAGCA+GGG 0.626190 3_2:-63942963 Msa0416880:CDS
GGTGGTGGTGATAATTCCAA+TGG 0.626917 3_2:+63945516 None:intergenic
GTGTTCGGGAGAAACTATGC+CGG 0.626957 3_2:-63945253 Msa0416880:CDS
TAATTTGCCAGCGTCTCTGG+TGG 0.627326 3_2:-63940381 Msa0416880:intron
ACTAATATAGTAAAATTGAG+AGG 0.627531 3_2:-63937272 Msa0416880:three_prime_UTR
TCGGTGCAGAAGATGGGCAG+TGG 0.627663 3_2:-63943240 Msa0416880:CDS
AACTTGTCATTATTGCAACA+GGG 0.628372 3_2:+63943456 None:intergenic
ATGGAGAAGAAATGTCCAGA+TGG 0.629322 3_2:-63941751 Msa0416880:CDS
CATTTATTGTATATAATGAG+CGG 0.629480 3_2:-63940175 Msa0416880:CDS
ATTTATATGCAGACACCTGA+TGG 0.632909 3_2:-63939707 Msa0416880:intron
GAGTGTGAATCTAGAAGTGA+AGG 0.638377 3_2:+63945672 None:intergenic
TCATAGACCACTAACTACAT+CGG 0.639246 3_2:-63937506 Msa0416880:exon
CAGTATGATCTGCAATACCT+CGG 0.639708 3_2:+63938344 None:intergenic
CGATCCCTGCTAAGGCCAGG+AGG 0.643069 3_2:+63942959 None:intergenic
TATGCCGGAGATGGAGTCGT+CGG 0.646746 3_2:-63945238 Msa0416880:CDS
GATCCCTGCTAAGGCCAGGA+GGG 0.648985 3_2:+63942960 None:intergenic
CTGTAGAAATACGCGCGACG+TGG 0.649285 3_2:+63945541 None:intergenic
AGAAAGGTCAAGCCCAGTAG+GGG 0.651129 3_2:+63943935 None:intergenic
TCTGGTAATGGAAATTCTGG+TGG 0.652606 3_2:-63945150 Msa0416880:CDS
AACCTCTATACCCCATAGAG+CGG 0.653508 3_2:+63943887 None:intergenic
GTATTGCAGATCATACTGCA+TGG 0.656303 3_2:-63938339 Msa0416880:CDS
ATATAGGTGCTATAGTGGTG+TGG 0.656941 3_2:-63940304 Msa0416880:CDS
CCATACTGCATCATGGACAA+AGG 0.657785 3_2:-63938584 Msa0416880:intron
AATGTCAAGGTGTTGAACAA+GGG 0.659465 3_2:-63938420 Msa0416880:CDS
GGCGAGCTTATCACGGAGGG+AGG 0.660430 3_2:+63945455 None:intergenic
TGAAGAAGGATAAGAAAAGG+TGG 0.663388 3_2:+63939351 None:intergenic
ATGTGATATAAAACTTCCCG+AGG 0.667291 3_2:-63939639 Msa0416880:intron
CTGTCTGCAGAGCCTCCCAA+AGG 0.668083 3_2:+63943750 None:intergenic
ACTTGTCATTATTGCAACAG+GGG 0.669538 3_2:+63943457 None:intergenic
AAAACAACCTAACATCACAA+AGG 0.671949 3_2:+63937390 None:intergenic
TCAATGAAGATTGACGAGAG+TGG 0.673498 3_2:-63938612 Msa0416880:CDS
AGTCCCTTGAGCAAGCCTGG+TGG 0.680286 3_2:-63943199 Msa0416880:CDS
GCATCTCAAGCCGCTCTATG+GGG 0.682344 3_2:-63943897 Msa0416880:CDS
ATCAGTTTGGAAGACATCGT+AGG 0.682722 3_2:-63940843 Msa0416880:intron
ACATGATGTGAAAAGGTCCG+AGG 0.697718 3_2:-63938361 Msa0416880:CDS
CCAAAGGATAAATTTCACCC+AGG 0.700567 3_2:+63943766 None:intergenic
CGGCGGAAATTGAATCCGGG+AGG 0.717481 3_2:+63945495 None:intergenic
ATGCGGCGAGCTTATCACGG+AGG 0.723729 3_2:+63945451 None:intergenic
TGCCTGTATAACAGAAACTG+GGG 0.723775 3_2:-63941825 Msa0416880:intron
GAAAAGAAAAGAGAAAACGG+TGG 0.732329 3_2:+63945703 None:intergenic
TTGGTCGAGAGTATCGCATG+CGG 0.737318 3_2:+63945434 None:intergenic
TGAGTCTGGTGATTTCGCGG+CGG 0.761726 3_2:+63945478 None:intergenic
AAAGCTTCGAATCATCAACG+CGG 0.841727 3_2:-63945412 Msa0416880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATTTTATTTATTTTT+AGG + chr3_2:63944955-63944974 None:intergenic 0.0%
!!! AATTTAGATTTAATTTTTGT+CGG + chr3_2:63938254-63938273 None:intergenic 10.0%
!!! TTTTAATATATACACTTAAA+AGG - chr3_2:63940521-63940540 Msa0416880:intron 10.0%
!! TTTAATATATACACTTAAAA+GGG - chr3_2:63940522-63940541 Msa0416880:intron 10.0%
!!! ATTTTTGGTATAAATTAATT+TGG - chr3_2:63943249-63943268 Msa0416880:CDS 10.0%
!!! TTTAAAATATTTTTTTCCAA+AGG + chr3_2:63944356-63944375 None:intergenic 10.0%
!! TATTAATGTGTTTATAAACA+AGG + chr3_2:63937845-63937864 None:intergenic 15.0%
!!! ATTTAGATTTAATTTTTGTC+GGG + chr3_2:63938253-63938272 None:intergenic 15.0%
!!! TAAATATCTAATTTGTGAAT+TGG - chr3_2:63939562-63939581 Msa0416880:intron 15.0%
!!! AAACATTTTGTATGAAATTT+TGG - chr3_2:63940054-63940073 Msa0416880:intron 15.0%
!! TAATATTATCTTTGGATTAA+AGG - chr3_2:63940178-63940197 Msa0416880:CDS 15.0%
!! TTATCAAAAATAGAATAGAA+TGG - chr3_2:63940267-63940286 Msa0416880:intron 15.0%
!!! AATTTAGTTTAGAAAATGAA+AGG + chr3_2:63941264-63941283 None:intergenic 15.0%
!! TAAATTAAGACATTCAAATT+TGG - chr3_2:63941278-63941297 Msa0416880:intron 15.0%
!! TAATCTTATATGTTGAAAAT+AGG - chr3_2:63941690-63941709 Msa0416880:CDS 15.0%
!! AATCTTATATGTTGAAAATA+GGG - chr3_2:63941691-63941710 Msa0416880:CDS 15.0%
!! ATAACAATGAGAAATTTATA+GGG + chr3_2:63942037-63942056 None:intergenic 15.0%
!! AATAACAATGAGAAATTTAT+AGG + chr3_2:63942038-63942057 None:intergenic 15.0%
!! ATTTCAATTCATATTCATAT+AGG - chr3_2:63942524-63942543 Msa0416880:intron 15.0%
!! AATTTATACCAAAAATACAA+TGG + chr3_2:63943245-63943264 None:intergenic 15.0%
!!! TTTCAAGTTTTACTTATAAA+CGG - chr3_2:63943674-63943693 Msa0416880:CDS 15.0%
!! TAGCATATGATTAATTAAAT+AGG - chr3_2:63943761-63943780 Msa0416880:CDS 15.0%
!!! AAATAGATTTTGTTAACTTA+TGG - chr3_2:63944113-63944132 Msa0416880:intron 15.0%
!!! AAAGTTATTTTTGTAATACT+TGG - chr3_2:63945143-63945162 Msa0416880:CDS 15.0%
!!! TTTTCCTGTAATTATATTAT+TGG - chr3_2:63945535-63945554 Msa0416880:CDS 15.0%
!! TTTCCTGTAATTATATTATT+GGG - chr3_2:63945536-63945555 Msa0416880:CDS 15.0%
!!! TTTAGATTTAATTTTTGTCG+GGG + chr3_2:63938252-63938271 None:intergenic 20.0%
!! ATTCCTTCTTAAAATTGATA+GGG - chr3_2:63939958-63939977 Msa0416880:intron 20.0%
!! AAGAACTCTAATATTATCTT+TGG - chr3_2:63940170-63940189 Msa0416880:CDS 20.0%
!! GAAAATCATGTTATGATATT+AGG - chr3_2:63940230-63940249 Msa0416880:intron 20.0%
!!! TAAAAAATTTGGAACTAACA+TGG - chr3_2:63940676-63940695 Msa0416880:intron 20.0%
!! AGTTTAATAACGTAACATAA+TGG - chr3_2:63940733-63940752 Msa0416880:intron 20.0%
!!! TATTTTTTCATTCTATCCAA+TGG - chr3_2:63940834-63940853 Msa0416880:intron 20.0%
!!! CGTTTTTATTAGGATATATT+GGG + chr3_2:63940919-63940938 None:intergenic 20.0%
!!! TCGTTTTTATTAGGATATAT+TGG + chr3_2:63940920-63940939 None:intergenic 20.0%
!! TATTGAAATAAAACAAGTAC+AGG + chr3_2:63941212-63941231 None:intergenic 20.0%
!! AAATTAGAAAGGCTAAAATA+TGG + chr3_2:63941803-63941822 None:intergenic 20.0%
!!! GTAGAAATAAAGTTGATATT+TGG + chr3_2:63941837-63941856 None:intergenic 20.0%
!! ATAAATTATGTAGATCAGTT+TGG - chr3_2:63941988-63942007 Msa0416880:intron 20.0%
!! TGTTATTATATCTACTTTCT+TGG - chr3_2:63942051-63942070 Msa0416880:intron 20.0%
!!! CTTGGTTTTATTGATTAAAT+TGG - chr3_2:63942069-63942088 Msa0416880:intron 20.0%
!! CATTTATTGTATATAATGAG+CGG - chr3_2:63942669-63942688 Msa0416880:intron 20.0%
!! TTTATTTAGGCAAATATTTG+AGG + chr3_2:63943055-63943074 None:intergenic 20.0%
!! TATAAACTGCAAGTTTATTT+AGG + chr3_2:63943068-63943087 None:intergenic 20.0%
!!! TTGGTATAAATTAATTTGGT+TGG - chr3_2:63943253-63943272 Msa0416880:CDS 20.0%
!!! TGGTATAAATTAATTTGGTT+GGG - chr3_2:63943254-63943273 Msa0416880:CDS 20.0%
!! AATGCATACAAATTTCTAAA+AGG - chr3_2:63943345-63943364 Msa0416880:intron 20.0%
!!! CATCTTTTTTTTTTTTGCAA+AGG + chr3_2:63943382-63943401 None:intergenic 20.0%
!! CTTTGCAAAAAAAAAAAAGA+TGG - chr3_2:63943380-63943399 Msa0416880:CDS 20.0%
!!! ATGTAATATTACTTTTTGTC+TGG + chr3_2:63943548-63943567 None:intergenic 20.0%
!!! AATTTTCATAATTGCAAACA+TGG + chr3_2:63943606-63943625 None:intergenic 20.0%
!!! TTCAAGTTTTACTTATAAAC+GGG - chr3_2:63943675-63943694 Msa0416880:CDS 20.0%
!! GACTAAATCCAAATAATTAT+GGG + chr3_2:63943877-63943896 None:intergenic 20.0%
!! ATAATAGCCAAAAATGTTAT+GGG - chr3_2:63944208-63944227 Msa0416880:intron 20.0%
!!! CTTACAGGTTAATTTTATTT+CGG - chr3_2:63944558-63944577 Msa0416880:intron 20.0%
!!! ATTTGCTAGTAATTGATATA+TGG - chr3_2:63944696-63944715 Msa0416880:intron 20.0%
!!! TTCGAGAAAATAATATGTTT+TGG + chr3_2:63944740-63944759 None:intergenic 20.0%
!!! TCTTTTCAATATTCTTATAC+AGG + chr3_2:63944887-63944906 None:intergenic 20.0%
!!! TTGGTAGTAGAAATTATTAT+AGG + chr3_2:63945409-63945428 None:intergenic 20.0%
!! ACTAATATAGTAAAATTGAG+AGG - chr3_2:63945572-63945591 Msa0416880:CDS 20.0%
!! CAATTCTCTTTCATTATTAA+GGG - chr3_2:63945625-63945644 Msa0416880:CDS 20.0%
! AACGAAAAGAAAAGAGAAAA+CGG + chr3_2:63937147-63937166 None:intergenic 25.0%
!!! TTTGTTTTTGTTGAAGTGTT+TGG - chr3_2:63937543-63937562 Msa0416880:CDS 25.0%
! TTAATTCCACTCCAATTATA+CGG - chr3_2:63937949-63937968 Msa0416880:intron 25.0%
! CATCAAAGACTATTATGTTA+TGG - chr3_2:63938067-63938086 Msa0416880:intron 25.0%
!! ACCTTTATTTAAAACCAACT+GGG - chr3_2:63938108-63938127 Msa0416880:intron 25.0%
! GAATGAATTGGGAAAAAAAA+AGG - chr3_2:63938467-63938486 Msa0416880:intron 25.0%
! ACTAACTATTCTATCTCAAA+TGG + chr3_2:63938533-63938552 None:intergenic 25.0%
!!! ATAGAATAGTTAGTTTGCAA+GGG - chr3_2:63938539-63938558 Msa0416880:intron 25.0%
!!! TTATGAACTGGTTCTAATAA+GGG - chr3_2:63938703-63938722 Msa0416880:intron 25.0%
!! TTCTTGTACTTCAAGTTATA+TGG - chr3_2:63939350-63939369 Msa0416880:CDS 25.0%
!!! TATACAATTGCTTTTCAGAA+GGG - chr3_2:63939517-63939536 Msa0416880:intron 25.0%
!!! TTCAAATGGTTTTTTTGTCA+AGG - chr3_2:63939708-63939727 Msa0416880:intron 25.0%
!!! TTTTTTTGTCAAGGAAGAAA+AGG - chr3_2:63939717-63939736 Msa0416880:intron 25.0%
!!! CTATCAATTTTAAGAAGGAA+TGG + chr3_2:63939959-63939978 None:intergenic 25.0%
! CATTCCTTCTTAAAATTGAT+AGG - chr3_2:63939957-63939976 Msa0416880:intron 25.0%
! AGCATGAGAAAGTAATAATT+AGG + chr3_2:63940148-63940167 None:intergenic 25.0%
! TTTGGATTAAAGGAAAGAAA+TGG - chr3_2:63940188-63940207 Msa0416880:CDS 25.0%
! AAATAGAATAGAATGGAACT+TGG - chr3_2:63940274-63940293 Msa0416880:intron 25.0%
!!! TTGCATCATTCGTTTTTATT+AGG + chr3_2:63940929-63940948 None:intergenic 25.0%
! TTGCATTGCTTCAAATTATT+TGG - chr3_2:63941321-63941340 Msa0416880:intron 25.0%
! TACTGTATTCTTAATATCGA+AGG + chr3_2:63941395-63941414 None:intergenic 25.0%
!! TAAGTTATTAACGCATGTTT+TGG + chr3_2:63941419-63941438 None:intergenic 25.0%
! AGATAGGGATAATTAACAAT+TGG - chr3_2:63941597-63941616 Msa0416880:intron 25.0%
!!! GTTAATGTTAGTTTGTTTCA+TGG - chr3_2:63941735-63941754 Msa0416880:CDS 25.0%
! ATTACGTAGTCAAATTAGAA+AGG + chr3_2:63941814-63941833 None:intergenic 25.0%
! TATAAGATGTTTGTATTAGC+TGG + chr3_2:63941883-63941902 None:intergenic 25.0%
! TAACCATTAAAGAGAATGTA+AGG + chr3_2:63942290-63942309 None:intergenic 25.0%
! GGCAAATTAAAAAGCAAAAA+GGG + chr3_2:63942452-63942471 None:intergenic 25.0%
! TGGCAAATTAAAAAGCAAAA+AGG + chr3_2:63942453-63942472 None:intergenic 25.0%
! TGCTCGTAAATATATAACAA+GGG + chr3_2:63942636-63942655 None:intergenic 25.0%
!!! TGAAGTATCTTTTTTATGTC+TGG - chr3_2:63942773-63942792 Msa0416880:intron 25.0%
!!! GAAGTATCTTTTTTATGTCT+GGG - chr3_2:63942774-63942793 Msa0416880:intron 25.0%
!! TTTAGAACCATGTTTAAAGT+TGG - chr3_2:63942985-63943004 Msa0416880:CDS 25.0%
! CTGAATATCATACTGTAATA+TGG + chr3_2:63943287-63943306 None:intergenic 25.0%
!!! TTCTGTCTTTTTAAAACCTT+TGG - chr3_2:63943651-63943670 Msa0416880:CDS 25.0%
! TAAGTAAAACTTGAAACCAA+AGG + chr3_2:63943670-63943689 None:intergenic 25.0%
! CTAATTACAACATCATTAAC+GGG + chr3_2:63943744-63943763 None:intergenic 25.0%
! GCTAATTACAACATCATTAA+CGG + chr3_2:63943745-63943764 None:intergenic 25.0%
! AATTAAATAGGTTGTGTTTC+TGG - chr3_2:63943773-63943792 Msa0416880:CDS 25.0%
! ATCCAAATAATTATGGGAAT+CGG + chr3_2:63943871-63943890 None:intergenic 25.0%
! GGACTAAATCCAAATAATTA+TGG + chr3_2:63943878-63943897 None:intergenic 25.0%
! AGCAATATAGCATTAACAAA+AGG + chr3_2:63943899-63943918 None:intergenic 25.0%
!! GTTAATGCTATATTGCTATT+TGG - chr3_2:63943902-63943921 Msa0416880:CDS 25.0%
!!! GTGATCTTTGTTTCTATAAA+TGG + chr3_2:63943977-63943996 None:intergenic 25.0%
! CATAATAGCCAAAAATGTTA+TGG - chr3_2:63944207-63944226 Msa0416880:intron 25.0%
! ACAACACTTCTTATTGATAT+AGG + chr3_2:63944296-63944315 None:intergenic 25.0%
!!! AATATTTTTTTCCAAAGGCT+AGG + chr3_2:63944351-63944370 None:intergenic 25.0%
! TTAGAAAATTAAGTGTTTCG+TGG + chr3_2:63944782-63944801 None:intergenic 25.0%
! CAACCCAATAATATAATTAC+AGG + chr3_2:63945542-63945561 None:intergenic 25.0%
! GCAATTCTCTTTCATTATTA+AGG - chr3_2:63945624-63945643 Msa0416880:CDS 25.0%
!! AATGATTTTGAGAAAGAGAG+AGG + chr3_2:63937208-63937227 None:intergenic 30.0%
TAATTCCACTCCAATTATAC+GGG - chr3_2:63937950-63937969 Msa0416880:intron 30.0%
AGAAATTCTCCACAATATCA+AGG + chr3_2:63938024-63938043 None:intergenic 30.0%
TGGAGAATTTCTGTTAAATG+CGG - chr3_2:63938032-63938051 Msa0416880:intron 30.0%
TTATGTTATGGCTTAGATTG+AGG - chr3_2:63938079-63938098 Msa0416880:intron 30.0%
! GACCTTTATTTAAAACCAAC+TGG - chr3_2:63938107-63938126 Msa0416880:intron 30.0%
!!! TCCCAGTTGGTTTTAAATAA+AGG + chr3_2:63938112-63938131 None:intergenic 30.0%
!! ATTGGTTTGTAAACCCAATT+CGG + chr3_2:63938137-63938156 None:intergenic 30.0%
! AATCCATGACATTTTCATAC+AGG - chr3_2:63938274-63938293 Msa0416880:intron 30.0%
! ATCCATGACATTTTCATACA+GGG - chr3_2:63938275-63938294 Msa0416880:intron 30.0%
TTGTCCCCAATATGAAAAAA+AGG - chr3_2:63938337-63938356 Msa0416880:CDS 30.0%
!!! CATGCCTTTTTTTCATATTG+GGG + chr3_2:63938344-63938363 None:intergenic 30.0%
!!! CCATGCCTTTTTTTCATATT+GGG + chr3_2:63938345-63938364 None:intergenic 30.0%
!!! TCCATGCCTTTTTTTCATAT+TGG + chr3_2:63938346-63938365 None:intergenic 30.0%
! AAAAAAGGCATGGAGTAATT+TGG - chr3_2:63938352-63938371 Msa0416880:CDS 30.0%
! AAAAAGGCATGGAGTAATTT+GGG - chr3_2:63938353-63938372 Msa0416880:CDS 30.0%
! TAATTTGGGTTTAAAAAGCC+AGG - chr3_2:63938367-63938386 Msa0416880:CDS 30.0%
! AATTTGGGTTTAAAAAGCCA+GGG - chr3_2:63938368-63938387 Msa0416880:CDS 30.0%
AAAATTGTGAGAGACTGAAT+TGG - chr3_2:63938409-63938428 Msa0416880:CDS 30.0%
AAATTGTGAGAGACTGAATT+GGG - chr3_2:63938410-63938429 Msa0416880:CDS 30.0%
!! GATAGAATAGTTAGTTTGCA+AGG - chr3_2:63938538-63938557 Msa0416880:intron 30.0%
! ATATCTGAGCTTTTGTCATT+CGG - chr3_2:63938634-63938653 Msa0416880:CDS 30.0%
ATACTTTGCATGTTATGAAC+TGG - chr3_2:63938691-63938710 Msa0416880:intron 30.0%
!! GTTATGAACTGGTTCTAATA+AGG - chr3_2:63938702-63938721 Msa0416880:intron 30.0%
GTTGTTATAATTGCATTACC+TGG - chr3_2:63938977-63938996 Msa0416880:intron 30.0%
CTAAATGCAAATTATGAACC+AGG + chr3_2:63938998-63939017 None:intergenic 30.0%
TACATATGCTTCATACATAC+AGG - chr3_2:63939019-63939038 Msa0416880:intron 30.0%
ACATATGCTTCATACATACA+GGG - chr3_2:63939020-63939039 Msa0416880:intron 30.0%
TAATAAGATCTTGTCCTTCT+AGG - chr3_2:63939045-63939064 Msa0416880:intron 30.0%
AATAAGATCTTGTCCTTCTA+GGG - chr3_2:63939046-63939065 Msa0416880:intron 30.0%
AACTTGTCATTATTGCAACA+GGG + chr3_2:63939391-63939410 None:intergenic 30.0%
ATAAAACCTGCTCAAAAAGT+TGG + chr3_2:63939490-63939509 None:intergenic 30.0%
!! CTATACAATTGCTTTTCAGA+AGG - chr3_2:63939516-63939535 Msa0416880:intron 30.0%
ACTTGAGATATCAATAACGA+CGG + chr3_2:63939766-63939785 None:intergenic 30.0%
TTACAAATCAGTGATACTGT+TGG - chr3_2:63939827-63939846 Msa0416880:intron 30.0%
!! CATCCCTATCAATTTTAAGA+AGG + chr3_2:63939964-63939983 None:intergenic 30.0%
CATGGAAATCATGCATTTAA+AGG + chr3_2:63940115-63940134 None:intergenic 30.0%
TTAAATGCATGATTTCCATG+TGG - chr3_2:63940115-63940134 Msa0416880:CDS 30.0%
TAATTAGGAATAATGCCACA+TGG + chr3_2:63940133-63940152 None:intergenic 30.0%
AAAGTTGAAGTTGTCAAACT+GGG - chr3_2:63940325-63940344 Msa0416880:CDS 30.0%
AAAGATAGCAAATTGATCCA+GGG + chr3_2:63940404-63940423 None:intergenic 30.0%
ATACACTTAAAAGGGCAAAA+AGG - chr3_2:63940530-63940549 Msa0416880:intron 30.0%
CACTATCTTGTGTAAAAACA+GGG + chr3_2:63940636-63940655 None:intergenic 30.0%
TCACTATCTTGTGTAAAAAC+AGG + chr3_2:63940637-63940656 None:intergenic 30.0%
ACTCAATGTAATCATCAACT+TGG + chr3_2:63940716-63940735 None:intergenic 30.0%
TAATGAAGTAATCAAGCCAT+TGG + chr3_2:63940853-63940872 None:intergenic 30.0%
AGAAGGAATTAATGTACTGA+TGG - chr3_2:63941074-63941093 Msa0416880:intron 30.0%
! AGGAAAATCATGTACCTTTT+TGG + chr3_2:63941192-63941211 None:intergenic 30.0%
GCTATATTATCCTTATAGTG+AGG - chr3_2:63941353-63941372 Msa0416880:intron 30.0%
GTAACTATTACTTAGGATGT+AGG + chr3_2:63941470-63941489 None:intergenic 30.0%
TTGTTAATTATCCCTATCTC+TGG + chr3_2:63941596-63941615 None:intergenic 30.0%
ATAGGCAATTCAATCATCTT+TGG + chr3_2:63941645-63941664 None:intergenic 30.0%
!!! GAGTTATTTTTGTTTGCTCA+AGG - chr3_2:63941713-63941732 Msa0416880:CDS 30.0%
ATTTCTACAATCAAGTTTGC+AGG - chr3_2:63941849-63941868 Msa0416880:intron 30.0%
!! ATATGTTGATTTACCATCTG+CGG - chr3_2:63941900-63941919 Msa0416880:intron 30.0%
AAGAATGTGAATAGTATACC+AGG - chr3_2:63941940-63941959 Msa0416880:intron 30.0%
TTTGTATTTAACACCATTCC+TGG + chr3_2:63941961-63941980 None:intergenic 30.0%
AACCACAAGCTGAAATTAAT+GGG - chr3_2:63942233-63942252 Msa0416880:intron 30.0%
! TTATATTTCTAAGCCAGGAA+AGG + chr3_2:63942262-63942281 None:intergenic 30.0%
! ATGGTTTATATTTCTAAGCC+AGG + chr3_2:63942267-63942286 None:intergenic 30.0%
CATTAAAGAGAATGTAAGGA+TGG + chr3_2:63942286-63942305 None:intergenic 30.0%
CATCCTTACATTCTCTTTAA+TGG - chr3_2:63942284-63942303 Msa0416880:intron 30.0%
TGTGTTAACATTTCATTCAC+GGG + chr3_2:63942412-63942431 None:intergenic 30.0%
GTGTGTTAACATTTCATTCA+CGG + chr3_2:63942413-63942432 None:intergenic 30.0%
! TATTCATATAGGTGCTATAG+TGG - chr3_2:63942535-63942554 Msa0416880:intron 30.0%
CTGCTCGTAAATATATAACA+AGG + chr3_2:63942637-63942656 None:intergenic 30.0%
!!! TCTTTTTTTCTTAGCAGATG+AGG + chr3_2:63942705-63942724 None:intergenic 30.0%
GCTAAGAAAAAAAGAAGACA+TGG - chr3_2:63942710-63942729 Msa0416880:intron 30.0%
! AGATGAGATATAAGAGTACA+GGG + chr3_2:63942863-63942882 None:intergenic 30.0%
! AAGATGAGATATAAGAGTAC+AGG + chr3_2:63942864-63942883 None:intergenic 30.0%
AATAATTCAAACATCGAGTG+CGG + chr3_2:63943015-63943034 None:intergenic 30.0%
CACTCGATGTTTGAATTATT+AGG - chr3_2:63943015-63943034 Msa0416880:intron 30.0%
! TATGCACACCATTGTATTTT+TGG - chr3_2:63943234-63943253 Msa0416880:CDS 30.0%
! GCATACAAATTTCTAAAAGG+TGG - chr3_2:63943348-63943367 Msa0416880:intron 30.0%
ATCCGATTCCCATAATTATT+TGG - chr3_2:63943866-63943885 Msa0416880:intron 30.0%
! GATTTTGTTAACTTATGGCA+TGG - chr3_2:63944118-63944137 Msa0416880:intron 30.0%
GTGTAAATTGCAAAATGTCA+AGG - chr3_2:63944411-63944430 Msa0416880:intron 30.0%
ATTGGAAACATGATGTGAAA+AGG - chr3_2:63944476-63944495 Msa0416880:intron 30.0%
!! GCAACTCTTTTTGATAACTT+GGG + chr3_2:63944660-63944679 None:intergenic 30.0%
CAATTACTAGCAAATCTGTA+TGG + chr3_2:63944691-63944710 None:intergenic 30.0%
TATGGATATGCATAGTAAGA+TGG - chr3_2:63944714-63944733 Msa0416880:intron 30.0%
CATAGTGAGTATTATGAACT+AGG + chr3_2:63944827-63944846 None:intergenic 30.0%
!!! TATTGTCATTTTACCGATAC+AGG - chr3_2:63945024-63945043 Msa0416880:intron 30.0%
!!! ATTGTCATTTTACCGATACA+GGG - chr3_2:63945025-63945044 Msa0416880:intron 30.0%
AATACATGATTTCCCTGTAT+CGG + chr3_2:63945040-63945059 None:intergenic 30.0%
ATCTTCAATTTGTATCCATC+TGG + chr3_2:63945070-63945089 None:intergenic 30.0%
ATACAAATTGAAGATCATGC+CGG - chr3_2:63945075-63945094 Msa0416880:CDS 30.0%
TAACGATCATGATAAAGCAA+CGG + chr3_2:63945119-63945138 None:intergenic 30.0%
ATCACTGTTTGCATTAAATC+AGG - chr3_2:63945209-63945228 Msa0416880:CDS 30.0%
AAAACAACCTAACATCACAA+AGG + chr3_2:63945457-63945476 None:intergenic 30.0%
AAGAGCTTGTGAATATTTGA+TGG + chr3_2:63945668-63945687 None:intergenic 30.0%
ATTATGGTGAAGAAGTGAAG+TGG + chr3_2:63937119-63937138 None:intergenic 35.0%
GAAAAGAAAAGAGAAAACGG+TGG + chr3_2:63937144-63937163 None:intergenic 35.0%
GAAGAAGAAGAAGATGAAGA+TGG + chr3_2:63937241-63937260 None:intergenic 35.0%
! ATGATTGAGAAGATGGATTC+TGG - chr3_2:63937676-63937695 Msa0416880:intron 35.0%
!! GATTCTGGTAATGGAAATTC+TGG - chr3_2:63937691-63937710 Msa0416880:intron 35.0%
GTTTGGAGGATCATGAAATT+CGG - chr3_2:63937731-63937750 Msa0416880:intron 35.0%
TTTGGAGGATCATGAAATTC+GGG - chr3_2:63937732-63937751 Msa0416880:intron 35.0%
GAATAAGTTGTTAGAGACGT+TGG - chr3_2:63937759-63937778 Msa0416880:intron 35.0%
ATTGCATTGGAGGAGTAATT+GGG - chr3_2:63937803-63937822 Msa0416880:intron 35.0%
GAACCAAGGTTCTTTAATAG+TGG - chr3_2:63937972-63937991 Msa0416880:intron 35.0%
TTGCCACTATTAAAGAACCT+TGG + chr3_2:63937978-63937997 None:intergenic 35.0%
AGGTTCTTTAATAGTGGCAA+TGG - chr3_2:63937978-63937997 Msa0416880:intron 35.0%
TCTTTAATAGTGGCAATGGT+TGG - chr3_2:63937982-63938001 Msa0416880:intron 35.0%
! TCTTTTCTCTCTTCCACTAT+CGG + chr3_2:63938161-63938180 None:intergenic 35.0%
! TCCATGACATTTTCATACAG+GGG - chr3_2:63938276-63938295 Msa0416880:intron 35.0%
GTCACTCTGATATAATGAGT+CGG - chr3_2:63938307-63938326 Msa0416880:CDS 35.0%
TCACTCTGATATAATGAGTC+GGG - chr3_2:63938308-63938327 Msa0416880:CDS 35.0%
CCCAATATGAAAAAAAGGCA+TGG - chr3_2:63938342-63938361 Msa0416880:CDS 35.0%
TAAAAAGCCAGGGTCTAAAA+TGG - chr3_2:63938378-63938397 Msa0416880:CDS 35.0%
! AAAAAGCCAGGGTCTAAAAT+GGG - chr3_2:63938379-63938398 Msa0416880:CDS 35.0%
TTGTGCTGTCTTGAATGAAT+TGG - chr3_2:63938455-63938474 Msa0416880:intron 35.0%
TGTGCTGTCTTGAATGAATT+GGG - chr3_2:63938456-63938475 Msa0416880:intron 35.0%
TTCGAATGACACATAACAGT+GGG + chr3_2:63938596-63938615 None:intergenic 35.0%
ACGTTGCAGTTATCAGATTA+TGG - chr3_2:63938787-63938806 Msa0416880:CDS 35.0%
CAGTTATCAGATTATGGTTC+TGG - chr3_2:63938793-63938812 Msa0416880:CDS 35.0%
GGAACTTATTGTCCAACAAT+TGG - chr3_2:63938814-63938833 Msa0416880:CDS 35.0%
! AGTGAAAGAAGGCCAAATTT+TGG - chr3_2:63938877-63938896 Msa0416880:intron 35.0%
! GTGAAAGAAGGCCAAATTTT+GGG - chr3_2:63938878-63938897 Msa0416880:intron 35.0%
! GCTTGACCTTTCTGAAAATA+CGG - chr3_2:63938919-63938938 Msa0416880:intron 35.0%
! CATACTCCGTATTTTCAGAA+AGG + chr3_2:63938928-63938947 None:intergenic 35.0%
CTGGGTGAAATTTATCCTTT+GGG - chr3_2:63939079-63939098 Msa0416880:intron 35.0%
! AGGTCTTATAAGAGATCTTC+AGG - chr3_2:63939195-63939214 Msa0416880:intron 35.0%
!! AAGAATTCTCTAGCCTTGAA+AGG + chr3_2:63939335-63939354 None:intergenic 35.0%
ACTTGTCATTATTGCAACAG+GGG + chr3_2:63939390-63939409 None:intergenic 35.0%
GAACTTGTCATTATTGCAAC+AGG + chr3_2:63939392-63939411 None:intergenic 35.0%
!! AACTTTCCAACTTTTTGAGC+AGG - chr3_2:63939481-63939500 Msa0416880:intron 35.0%
!! ATGACAAAGGCATCTTCAAA+TGG - chr3_2:63939694-63939713 Msa0416880:CDS 35.0%
AGGAAAGAAATGGAATGAAG+TGG - chr3_2:63940198-63940217 Msa0416880:intron 35.0%
GGAAAGAAATGGAATGAAGT+GGG - chr3_2:63940199-63940218 Msa0416880:intron 35.0%
GAAAGAAATGGAATGAAGTG+GGG - chr3_2:63940200-63940219 Msa0416880:intron 35.0%
TGATATTAGGTTTCACTGTC+TGG - chr3_2:63940243-63940262 Msa0416880:intron 35.0%
TAGAATGGAACTTGGACTTA+TGG - chr3_2:63940282-63940301 Msa0416880:intron 35.0%
GAAAGTTGAAGTTGTCAAAC+TGG - chr3_2:63940324-63940343 Msa0416880:CDS 35.0%
! TTGAACCAATCGGTTCAAAA+CGG - chr3_2:63940378-63940397 Msa0416880:intron 35.0%
CAAAGATAGCAAATTGATCC+AGG + chr3_2:63940405-63940424 None:intergenic 35.0%
AAATTTCCATTTAGTCCAGC+AGG - chr3_2:63940429-63940448 Msa0416880:intron 35.0%
AATATGCTGCTCTCACAATT+AGG + chr3_2:63940470-63940489 None:intergenic 35.0%
!! AAATGTGAAGTGTTGCATAG+TGG + chr3_2:63940496-63940515 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr3_2:63940631-63940650 None:intergenic 35.0%
CATAGAGTGTAATGCAACAT+AGG + chr3_2:63940890-63940909 None:intergenic 35.0%
TACACTGAATTCGACAAGTT+TGG - chr3_2:63941147-63941166 Msa0416880:intron 35.0%
ACACTGAATTCGACAAGTTT+GGG - chr3_2:63941148-63941167 Msa0416880:intron 35.0%
! GACAAGTTTGGGATTACTAA+TGG - chr3_2:63941159-63941178 Msa0416880:intron 35.0%
! CTAATGGATCTCTTCCAAAA+AGG - chr3_2:63941175-63941194 Msa0416880:intron 35.0%
TCAATATTTCATCCATCTCG+TGG - chr3_2:63941226-63941245 Msa0416880:intron 35.0%
ATTATACGTGCCTCACTATA+AGG + chr3_2:63941366-63941385 None:intergenic 35.0%
TGAGACGGTAACTATTACTT+AGG + chr3_2:63941477-63941496 None:intergenic 35.0%
! ATTCAATCATCTTTGGAGGT+TGG + chr3_2:63941638-63941657 None:intergenic 35.0%
AGATGATTGAATTGCCTATC+TGG - chr3_2:63941646-63941665 Msa0416880:intron 35.0%
!! GTTAGTTTGTTTCATGGTGA+AGG - chr3_2:63941741-63941760 Msa0416880:CDS 35.0%
TGTGAATAGTATACCAGGAA+TGG - chr3_2:63941945-63941964 Msa0416880:intron 35.0%
CAACCACAAGCTGAAATTAA+TGG - chr3_2:63942232-63942251 Msa0416880:intron 35.0%
AACCCATTAATTTCAGCTTG+TGG + chr3_2:63942238-63942257 None:intergenic 35.0%
!! AATTAATGGGTTTCCTTTCC+TGG - chr3_2:63942246-63942265 Msa0416880:intron 35.0%
CTATCCTGTTCATTACTTAG+TGG - chr3_2:63942314-63942333 Msa0416880:intron 35.0%
AACACCACTAAGTAATGAAC+AGG + chr3_2:63942321-63942340 None:intergenic 35.0%
GTTCATTACTTAGTGGTGTT+TGG - chr3_2:63942321-63942340 Msa0416880:intron 35.0%
TACTTAGTGGTGTTTGGTAA+AGG - chr3_2:63942327-63942346 Msa0416880:intron 35.0%
AACATTTCATTCACGGGAAA+AGG + chr3_2:63942406-63942425 None:intergenic 35.0%
TTGTATATAATGAGCGGAGA+AGG - chr3_2:63942675-63942694 Msa0416880:intron 35.0%
TGTATATAATGAGCGGAGAA+GGG - chr3_2:63942676-63942695 Msa0416880:intron 35.0%
CATGATTAGTAAGTCAAACC+TGG + chr3_2:63942751-63942770 None:intergenic 35.0%
CGATTGAAGATCGTATGTAT+CGG + chr3_2:63942811-63942830 None:intergenic 35.0%
ATCAGGTGTCTGCATATAAA+TGG + chr3_2:63943138-63943157 None:intergenic 35.0%
ATTTATATGCAGACACCTGA+TGG - chr3_2:63943137-63943156 Msa0416880:CDS 35.0%
!! TCGGGAAGTTTTATATCACA+TGG + chr3_2:63943206-63943225 None:intergenic 35.0%
ATGTGATATAAAACTTCCCG+AGG - chr3_2:63943205-63943224 Msa0416880:CDS 35.0%
GATGAGAACTACGTTTATTC+AGG - chr3_2:63943469-63943488 Msa0416880:CDS 35.0%
TGAAGAAGGATAAGAAAAGG+TGG + chr3_2:63943496-63943515 None:intergenic 35.0%
GGATGAAGAAGGATAAGAAA+AGG + chr3_2:63943499-63943518 None:intergenic 35.0%
TCCTTTAATGAACATGTCAG+GGG + chr3_2:63943713-63943732 None:intergenic 35.0%
CTCCTTTAATGAACATGTCA+GGG + chr3_2:63943714-63943733 None:intergenic 35.0%
ATACGTGTTACAGCACTTTA+CGG + chr3_2:63943806-63943825 None:intergenic 35.0%
!! TCTTTGCTGTGACAGTTTTA+TGG - chr3_2:63944011-63944030 Msa0416880:CDS 35.0%
TCTATTTGAGAAGTAGAACC+TGG + chr3_2:63944100-63944119 None:intergenic 35.0%
TTCCATTGACCTGGAATAAA+AGG + chr3_2:63944180-63944199 None:intergenic 35.0%
!!! CATTTTTGGCTATTATGACC+AGG + chr3_2:63944204-63944223 None:intergenic 35.0%
! CATTGAGCCCATAACATTTT+TGG + chr3_2:63944218-63944237 None:intergenic 35.0%
AGGCAAGATCAATGTAATAC+AGG + chr3_2:63944322-63944341 None:intergenic 35.0%
!! GAGTTTCTTGTTACTTTGCT+AGG - chr3_2:63944380-63944399 Msa0416880:intron 35.0%
!! AAATGTCAAGGTGTTGAACA+AGG - chr3_2:63944423-63944442 Msa0416880:intron 35.0%
!! AATGTCAAGGTGTTGAACAA+GGG - chr3_2:63944424-63944443 Msa0416880:intron 35.0%
TGTTGAACAAGGGAATTGAT+TGG - chr3_2:63944434-63944453 Msa0416880:intron 35.0%
AAGGGAATTGATTGGAGTTA+TGG - chr3_2:63944442-63944461 Msa0416880:intron 35.0%
!! GGCAACTCTTTTTGATAACT+TGG + chr3_2:63944661-63944680 None:intergenic 35.0%
GCAAATCTGTATGGATCAAA+TGG + chr3_2:63944682-63944701 None:intergenic 35.0%
TTAAGTGTTTCGTGGCTAAA+AGG + chr3_2:63944774-63944793 None:intergenic 35.0%
GTGAGTATTATGAACTAGGA+GGG + chr3_2:63944823-63944842 None:intergenic 35.0%
AGTGAGTATTATGAACTAGG+AGG + chr3_2:63944824-63944843 None:intergenic 35.0%
TTCTTATACAGGTGACTACT+AGG + chr3_2:63944876-63944895 None:intergenic 35.0%
! CATGTATTTGAAGTTCCAGA+TGG - chr3_2:63945052-63945071 Msa0416880:CDS 35.0%
TACAAATTGAAGATCATGCC+GGG - chr3_2:63945076-63945095 Msa0416880:CDS 35.0%
! GTTGCTTTATCATGATCGTT+AGG - chr3_2:63945118-63945137 Msa0416880:CDS 35.0%
TCATAGACCACTAACTACAT+CGG - chr3_2:63945338-63945357 Msa0416880:CDS 35.0%
ATTTCTACTACCAAGATGAC+AGG - chr3_2:63945415-63945434 Msa0416880:CDS 35.0%
AGTTCAACCTTTGTGATGTT+AGG - chr3_2:63945447-63945466 Msa0416880:CDS 35.0%
AAAAACTCGAAGAGAACAGA+TGG + chr3_2:63945514-63945533 None:intergenic 35.0%
AGAGAAAACGGTGGTGATTA+TGG + chr3_2:63937135-63937154 None:intergenic 40.0%
GAGTGTGAATCTAGAAGTGA+AGG + chr3_2:63937175-63937194 None:intergenic 40.0%
! GCGTATTTCTACAGAACCAT+TGG - chr3_2:63937312-63937331 Msa0416880:intron 40.0%
!!! CGTTGATGATTCGAAGCTTT+TGG + chr3_2:63937432-63937451 None:intergenic 40.0%
AAAGCTTCGAATCATCAACG+CGG - chr3_2:63937432-63937451 Msa0416880:three_prime_UTR 40.0%
TACAGAGTGAGACGTTTCTT+CGG - chr3_2:63937457-63937476 Msa0416880:three_prime_UTR 40.0%
! TCAAGAGCATGTGTTGTGTT+CGG - chr3_2:63937576-63937595 Msa0416880:CDS 40.0%
! GAGAAGATGGATTCTGGTAA+TGG - chr3_2:63937682-63937701 Msa0416880:intron 40.0%
!! TCTGGTAATGGAAATTCTGG+TGG - chr3_2:63937694-63937713 Msa0416880:intron 40.0%
!!! GAAATTCTGGTGGTGGTTTT+GGG - chr3_2:63937704-63937723 Msa0416880:intron 40.0%
GAGAGGTTCTATGATTGCAT+TGG - chr3_2:63937790-63937809 Msa0416880:CDS 40.0%
AGGTTCTATGATTGCATTGG+AGG - chr3_2:63937793-63937812 Msa0416880:CDS 40.0%
GATTGCATTGGAGGAGTAAT+TGG - chr3_2:63937802-63937821 Msa0416880:intron 40.0%
AACCTTGGTTCCCGTATAAT+TGG + chr3_2:63937963-63937982 None:intergenic 40.0%
TGGTGCAATCCTTGATATTG+TGG - chr3_2:63938012-63938031 Msa0416880:intron 40.0%
TATGGCTTAGATTGAGGTTG+TGG - chr3_2:63938085-63938104 Msa0416880:intron 40.0%
TTACAAACCAATCCCGATAG+TGG - chr3_2:63938145-63938164 Msa0416880:intron 40.0%
! CTTTTCTCTCTTCCACTATC+GGG + chr3_2:63938160-63938179 None:intergenic 40.0%
TAAATGTGAGGGGCTGAATT+GGG + chr3_2:63938210-63938229 None:intergenic 40.0%
ATAAATGTGAGGGGCTGAAT+TGG + chr3_2:63938211-63938230 None:intergenic 40.0%
! TTTTTGTCGGGGACTAGATT+AGG + chr3_2:63938241-63938260 None:intergenic 40.0%
ACCCCTGTATGAAAATGTCA+TGG + chr3_2:63938280-63938299 None:intergenic 40.0%
CACTCTGATATAATGAGTCG+GGG - chr3_2:63938309-63938328 Msa0416880:CDS 40.0%
ATGACACATAACAGTGGGAA+TGG + chr3_2:63938591-63938610 None:intergenic 40.0%
GTTCGAATGACACATAACAG+TGG + chr3_2:63938597-63938616 None:intergenic 40.0%
AATAAGGGCAGAAGTGGTTT+AGG - chr3_2:63938718-63938737 Msa0416880:intron 40.0%
TTGTCCAACAATTGGTTGAC+CGG - chr3_2:63938822-63938841 Msa0416880:intron 40.0%
TTGACCGGAAGAATACAAAC+TGG - chr3_2:63938837-63938856 Msa0416880:intron 40.0%
GAGACCAGTTTGTATTCTTC+CGG + chr3_2:63938844-63938863 None:intergenic 40.0%
!! GGGTATCGATTCCCAAAATT+TGG + chr3_2:63938892-63938911 None:intergenic 40.0%
CCAAAGGATAAATTTCACCC+AGG + chr3_2:63939081-63939100 None:intergenic 40.0%
CCTGGGTGAAATTTATCCTT+TGG - chr3_2:63939078-63939097 Msa0416880:intron 40.0%
GGTGAAATTTATCCTTTGGG+AGG - chr3_2:63939082-63939101 Msa0416880:intron 40.0%
GATTTAGTTGATCCTAGCAC+TGG - chr3_2:63939121-63939140 Msa0416880:intron 40.0%
AACAAAGTCCTCCCACAAAA+CGG + chr3_2:63939172-63939191 None:intergenic 40.0%
!! TCTAGCCTTGAAAGGTGAAA+CGG + chr3_2:63939327-63939346 None:intergenic 40.0%
! TGGAAACTTGCTCATGACAA+AGG - chr3_2:63939681-63939700 Msa0416880:CDS 40.0%
TCAACTTTCGCAACATTGAC+CGG + chr3_2:63940313-63940332 None:intergenic 40.0%
CTAGAACAGCTTGAACCAAT+CGG - chr3_2:63940368-63940387 Msa0416880:CDS 40.0%
TTAGTTCCTGCTGGACTAAA+TGG + chr3_2:63940438-63940457 None:intergenic 40.0%
AAAGGGCAAAAAGGACAACT+CGG - chr3_2:63940539-63940558 Msa0416880:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_2:63940605-63940624 None:intergenic 40.0%
AGGTTGGAAGTTGGATAGAA+AGG + chr3_2:63940772-63940791 None:intergenic 40.0%
AGAAGGAAAAGGTTGGAAGT+TGG + chr3_2:63940781-63940800 None:intergenic 40.0%
GATTGGAAGAAGGAAAAGGT+TGG + chr3_2:63940788-63940807 None:intergenic 40.0%
! ACCTTTTCCTTCTTCCAATC+TGG - chr3_2:63940788-63940807 Msa0416880:intron 40.0%
TCCAGATTGGAAGAAGGAAA+AGG + chr3_2:63940792-63940811 None:intergenic 40.0%
! TTTTCCTTCTTCCAATCTGG+AGG - chr3_2:63940791-63940810 Msa0416880:intron 40.0%
ATATCCTCCAGATTGGAAGA+AGG + chr3_2:63940798-63940817 None:intergenic 40.0%
TGTGCCTGTATAACAGAAAC+TGG - chr3_2:63941017-63941036 Msa0416880:intron 40.0%
GTGCCTGTATAACAGAAACT+GGG - chr3_2:63941018-63941037 Msa0416880:intron 40.0%
TGCCTGTATAACAGAAACTG+GGG - chr3_2:63941019-63941038 Msa0416880:intron 40.0%
AACCCCAGTTTCTGTTATAC+AGG + chr3_2:63941024-63941043 None:intergenic 40.0%
ATGGAGAAGAAATGTCCAGA+TGG - chr3_2:63941093-63941112 Msa0416880:intron 40.0%
TCAAATCACATTCCACGAGA+TGG + chr3_2:63941241-63941260 None:intergenic 40.0%
TAGTGATGCATCTCTTGAGA+CGG + chr3_2:63941492-63941511 None:intergenic 40.0%
TGTAGTCATGAACCAGAGAT+AGG - chr3_2:63941581-63941600 Msa0416880:intron 40.0%
GTAGTCATGAACCAGAGATA+GGG - chr3_2:63941582-63941601 Msa0416880:intron 40.0%
! TCATCTTTGGAGGTTGGATT+GGG + chr3_2:63941632-63941651 None:intergenic 40.0%
! ATCATCTTTGGAGGTTGGAT+TGG + chr3_2:63941633-63941652 None:intergenic 40.0%
GGCAATTCAATCATCTTTGG+AGG + chr3_2:63941642-63941661 None:intergenic 40.0%
TGCAAACAAAAGCTCCAGAT+AGG + chr3_2:63941663-63941682 None:intergenic 40.0%
ATCAGTTTGGAAGACATCGT+AGG - chr3_2:63942001-63942020 Msa0416880:intron 40.0%
ACACCAATAACAGTCTGAGT+AGG - chr3_2:63942186-63942205 Msa0416880:intron 40.0%
ACTCCTACTCAGACTGTTAT+TGG + chr3_2:63942192-63942211 None:intergenic 40.0%
!!! TTTTAATTTGCCAGCGTCTC+TGG - chr3_2:63942460-63942479 Msa0416880:intron 40.0%
! ATATAGGTGCTATAGTGGTG+TGG - chr3_2:63942540-63942559 Msa0416880:intron 40.0%
GGACAGTACAGAGATTAAAC+TGG + chr3_2:63942842-63942861 None:intergenic 40.0%
! CTTTTAGCCTCTTTTTCCTG+AGG - chr3_2:63942881-63942900 Msa0416880:intron 40.0%
AAATAACCAGTGCAAACCTC+AGG + chr3_2:63942900-63942919 None:intergenic 40.0%
!!! GTTTGCACTGGTTATTTTCC+AGG - chr3_2:63942903-63942922 Msa0416880:intron 40.0%
! AGTTAAGTGAGCTCTAATCC+AGG + chr3_2:63942932-63942951 None:intergenic 40.0%
!! TGGTTCTAAAACACAGCAGT+AGG + chr3_2:63942975-63942994 None:intergenic 40.0%
CGGTTCTCCAACTTTAAACA+TGG + chr3_2:63942995-63943014 None:intergenic 40.0%
TATCTTGAACGTGTCAGTGA+CGG - chr3_2:63943086-63943105 Msa0416880:intron 40.0%
! ATATCCAATAGAGCACCATC+AGG + chr3_2:63943155-63943174 None:intergenic 40.0%
TGGTGTGCATATCTATACCT+CGG + chr3_2:63943225-63943244 None:intergenic 40.0%
ACCCCTGACATGTTCATTAA+AGG - chr3_2:63943709-63943728 Msa0416880:CDS 40.0%
GCTCCTTTAATGAACATGTC+AGG + chr3_2:63943715-63943734 None:intergenic 40.0%
!! TTGCTGTGACAGTTTTATGG+TGG - chr3_2:63944014-63944033 Msa0416880:CDS 40.0%
TTATGGTGGTTCCATATCGA+AGG - chr3_2:63944028-63944047 Msa0416880:CDS 40.0%
TATGGTGGTTCCATATCGAA+GGG - chr3_2:63944029-63944048 Msa0416880:CDS 40.0%
!! CTTATGGCATGGAGTTGATA+AGG - chr3_2:63944129-63944148 Msa0416880:intron 40.0%
!! GCATGGAGTTGATAAGGTAA+CGG - chr3_2:63944135-63944154 Msa0416880:intron 40.0%
!! CATGGAGTTGATAAGGTAAC+GGG - chr3_2:63944136-63944155 Msa0416880:intron 40.0%
! GTGACTTGACCTTTTATTCC+AGG - chr3_2:63944168-63944187 Msa0416880:intron 40.0%
! GACCTTTTATTCCAGGTCAA+TGG - chr3_2:63944175-63944194 Msa0416880:intron 40.0%
TCAATGAAGATTGACGAGAG+TGG - chr3_2:63944232-63944251 Msa0416880:intron 40.0%
! TTTTTCCAAAGGCTAGGATC+AGG + chr3_2:63944345-63944364 None:intergenic 40.0%
!! TCTTGTTACTTTGCTAGGTG+TGG - chr3_2:63944385-63944404 Msa0416880:intron 40.0%
GGAATTGATTGGAGTTATGG+TGG - chr3_2:63944445-63944464 Msa0416880:intron 40.0%
! GTTATGGTGGAAACGTGTAT+TGG - chr3_2:63944458-63944477 Msa0416880:intron 40.0%
CAGTATGATCTGCAATACCT+CGG + chr3_2:63944503-63944522 None:intergenic 40.0%
GTATTGCAGATCATACTGCA+TGG - chr3_2:63944505-63944524 Msa0416880:intron 40.0%
AGCTACTGATGTTGTCTTAC+AGG - chr3_2:63944543-63944562 Msa0416880:intron 40.0%
AATACATACCACCCACACAT+TGG - chr3_2:63944619-63944638 Msa0416880:intron 40.0%
GTTTCGTGGCTAAAAGGTAA+TGG + chr3_2:63944768-63944787 None:intergenic 40.0%
TATACAGGTGACTACTAGGT+CGG + chr3_2:63944872-63944891 None:intergenic 40.0%
CAGTTAGATCCGATTGAAGA+GGG - chr3_2:63945242-63945261 Msa0416880:CDS 40.0%
TCCATCATACCCTCTTCAAT+CGG + chr3_2:63945254-63945273 None:intergenic 40.0%
CACTGGGATTACAAGATAGA+AGG - chr3_2:63945287-63945306 Msa0416880:CDS 40.0%
AAGACATCCGATGTAGTTAG+TGG + chr3_2:63945348-63945367 None:intergenic 40.0%
TTCTGTTCAACCTGTCATCT+TGG + chr3_2:63945428-63945447 None:intergenic 40.0%
ATTGAGAGGAATGCAAGCAA+TGG - chr3_2:63945586-63945605 Msa0416880:CDS 40.0%
TGGCGACTTACAACAGAAAA+TGG + chr3_2:63945696-63945715 None:intergenic 40.0%
! ATTTTCTGTTGTAAGTCGCC+AGG - chr3_2:63945695-63945714 Msa0416880:CDS 40.0%
GACATTCAAACACATGAACC+TGG + chr3_2:63945716-63945735 None:intergenic 40.0%
! GGTGGTGGTGATAATTCCAA+TGG + chr3_2:63937331-63937350 None:intergenic 45.0%
! TAGTCCAGCATTTCTGGAAG+AGG + chr3_2:63937485-63937504 None:intergenic 45.0%
!! CAGAAATGCTGGACTAGCTA+GGG - chr3_2:63937489-63937508 Msa0416880:three_prime_UTR 45.0%
! GTTGAAGTGTTTGGTAGCTG+CGG - chr3_2:63937552-63937571 Msa0416880:CDS 45.0%
! TTGAAGTGTTTGGTAGCTGC+GGG - chr3_2:63937553-63937572 Msa0416880:CDS 45.0%
! CAAGAGCATGTGTTGTGTTC+GGG - chr3_2:63937577-63937596 Msa0416880:CDS 45.0%
!! GAAGAGTGCGTTTTATGCTC+TGG - chr3_2:63937648-63937667 Msa0416880:intron 45.0%
GGCGAAGATGATTGAGAAGA+TGG - chr3_2:63937669-63937688 Msa0416880:intron 45.0%
!! GGTAATGGAAATTCTGGTGG+TGG - chr3_2:63937697-63937716 Msa0416880:intron 45.0%
!!! GGAAATTCTGGTGGTGGTTT+TGG - chr3_2:63937703-63937722 Msa0416880:intron 45.0%
TGGTTCCCGTATAATTGGAG+TGG + chr3_2:63937958-63937977 None:intergenic 45.0%
CTCCAATTATACGGGAACCA+AGG - chr3_2:63937958-63937977 Msa0416880:intron 45.0%
TGGCAATGGTTGGAGTTATG+TGG - chr3_2:63937992-63938011 Msa0416880:intron 45.0%
AACCAACTGGGAATCCGAAT+TGG - chr3_2:63938120-63938139 Msa0416880:intron 45.0%
ACCAACTGGGAATCCGAATT+GGG - chr3_2:63938121-63938140 Msa0416880:intron 45.0%
ACATAACAGTGGGAATGGAC+AGG + chr3_2:63938586-63938605 None:intergenic 45.0%
! GGTTCTAATAAGGGCAGAAG+TGG - chr3_2:63938712-63938731 Msa0416880:intron 45.0%
TCTTCCGGTCAACCAATTGT+TGG + chr3_2:63938829-63938848 None:intergenic 45.0%
CACATGCACGAAGTGAAAGA+AGG - chr3_2:63938866-63938885 Msa0416880:intron 45.0%
AACCTCTATACCCCATAGAG+CGG + chr3_2:63938960-63938979 None:intergenic 45.0%
GGATAAATTTCACCCAGGTC+TGG + chr3_2:63939076-63939095 None:intergenic 45.0%
! GTTTTGTGGGAGGACTTTGT+TGG - chr3_2:63939171-63939190 Msa0416880:intron 45.0%
! TTCTGCCGTTTCACCTTTCA+AGG - chr3_2:63939319-63939338 Msa0416880:CDS 45.0%
ACAGGGAAGTGATGTGTTTG+TGG + chr3_2:63939427-63939446 None:intergenic 45.0%
TGCGAAACACTCTCTTGGTT+TGG - chr3_2:63939446-63939465 Msa0416880:intron 45.0%
!! ACACTCTCTTGGTTTGGAAG+AGG - chr3_2:63939452-63939471 Msa0416880:intron 45.0%
CAATAACGACGGACCTAACT+TGG + chr3_2:63939755-63939774 None:intergenic 45.0%
TGGAATGAAGTGGGGCAAAA+TGG - chr3_2:63940208-63940227 Msa0416880:intron 45.0%
ATGGAACTTGGACTTATGGC+TGG - chr3_2:63940286-63940305 Msa0416880:intron 45.0%
! TATGCAGGTTTAGTTCCTGC+TGG + chr3_2:63940447-63940466 None:intergenic 45.0%
GCTCTCACAATTAGGTATGC+AGG + chr3_2:63940462-63940481 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_2:63940606-63940625 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_2:63940609-63940628 None:intergenic 45.0%
GCATGCAATATCCTCCAGAT+TGG + chr3_2:63940805-63940824 None:intergenic 45.0%
AGAAATGTCCAGATGGCAAC+TGG - chr3_2:63941100-63941119 Msa0416880:intron 45.0%
GAAATGTCCAGATGGCAACT+GGG - chr3_2:63941101-63941120 Msa0416880:intron 45.0%
GTGCAAACCTCAGGAAAAAG+AGG + chr3_2:63942891-63942910 None:intergenic 45.0%
! CTTTTTCCTGAGGTTTGCAC+TGG - chr3_2:63942891-63942910 Msa0416880:intron 45.0%
!! TGGTTATTTTCCAGGATGCC+TGG - chr3_2:63942911-63942930 Msa0416880:intron 45.0%
ATCTTGAACGTGTCAGTGAC+GGG - chr3_2:63943087-63943106 Msa0416880:intron 45.0%
GGTGTGCATATCTATACCTC+GGG + chr3_2:63943224-63943243 None:intergenic 45.0%
ATCCTTCTTCATCCTGCTCT+TGG - chr3_2:63943505-63943524 Msa0416880:CDS 45.0%
GTGTTACAGCACTTTACGGA+TGG + chr3_2:63943802-63943821 None:intergenic 45.0%
TAACTCAGAGCCCTTCGATA+TGG + chr3_2:63944042-63944061 None:intergenic 45.0%
!! GGGCTCTGAGTTACAAATAG+AGG - chr3_2:63944049-63944068 Msa0416880:CDS 45.0%
! TAGAGGTTGCAGAGCTCTTT+TGG - chr3_2:63944066-63944085 Msa0416880:intron 45.0%
GGTGAATCCATACTGCATCA+TGG - chr3_2:63944253-63944272 Msa0416880:intron 45.0%
CCTTTGTCCATGATGCAGTA+TGG + chr3_2:63944263-63944282 None:intergenic 45.0%
CCATACTGCATCATGGACAA+AGG - chr3_2:63944260-63944279 Msa0416880:intron 45.0%
! GTTACTTTGCTAGGTGTGGA+AGG - chr3_2:63944389-63944408 Msa0416880:intron 45.0%
ACATGATGTGAAAAGGTCCG+AGG - chr3_2:63944483-63944502 Msa0416880:intron 45.0%
AACAGTCAGCACCAATGTGT+GGG + chr3_2:63944633-63944652 None:intergenic 45.0%
AAACAGTCAGCACCAATGTG+TGG + chr3_2:63944634-63944653 None:intergenic 45.0%
!! TGACTACTAGGTCGGTTTGA+TGG + chr3_2:63944864-63944883 None:intergenic 45.0%
AAGCAACGGTTAAGAGACCT+GGG + chr3_2:63945105-63945124 None:intergenic 45.0%
AAAGCAACGGTTAAGAGACC+TGG + chr3_2:63945106-63945125 None:intergenic 45.0%
CCTCTTCAATCGGATCTAAC+TGG + chr3_2:63945244-63945263 None:intergenic 45.0%
CCAGTTAGATCCGATTGAAG+AGG - chr3_2:63945241-63945260 Msa0416880:CDS 45.0%
! TCCGATTGAAGAGGGTATGA+TGG - chr3_2:63945250-63945269 Msa0416880:CDS 45.0%
GATGTCTTCTGCGTGAATCA+TGG - chr3_2:63945360-63945379 Msa0416880:CDS 45.0%
!!! GTTATAATTTTTAAAAAATT+TGG - chr3_2:63940665-63940684 Msa0416880:intron 5.0%
GAATTATCACCACCACCTCC+CGG - chr3_2:63937334-63937353 Msa0416880:intron 50.0%
AAATTGAATCCGGGAGGTGG+TGG + chr3_2:63937346-63937365 None:intergenic 50.0%
TTCGCGGCGGAAATTGAATC+CGG + chr3_2:63937356-63937375 None:intergenic 50.0%
AGGTGAGTCTGGTGATTTCG+CGG + chr3_2:63937372-63937391 None:intergenic 50.0%
!! TTGGTCGAGAGTATCGCATG+CGG + chr3_2:63937413-63937432 None:intergenic 50.0%
GGTTCCTCTTCCAGAAATGC+TGG - chr3_2:63937478-63937497 Msa0416880:three_prime_UTR 50.0%
CCTAGCTAGTCCAGCATTTC+TGG + chr3_2:63937491-63937510 None:intergenic 50.0%
!! CCAGAAATGCTGGACTAGCT+AGG - chr3_2:63937488-63937507 Msa0416880:three_prime_UTR 50.0%
!! CTAGGGTTTTATCGACGCTG+CGG - chr3_2:63937506-63937525 Msa0416880:exon 50.0%
GTGTTCGGGAGAAACTATGC+CGG - chr3_2:63937591-63937610 Msa0416880:CDS 50.0%
!!! TTCTGGTGGTGGTTTTGGGA+TGG - chr3_2:63937708-63937727 Msa0416880:intron 50.0%
!!! TCTGGTGGTGGTTTTGGGAT+GGG - chr3_2:63937709-63937728 Msa0416880:intron 50.0%
!!! TGGTGGTTTTGGGATGGGTT+TGG - chr3_2:63937714-63937733 Msa0416880:intron 50.0%
!!! TGGTTTTGGGATGGGTTTGG+AGG - chr3_2:63937717-63937736 Msa0416880:intron 50.0%
ACCCAATTCGGATTCCCAGT+TGG + chr3_2:63938125-63938144 None:intergenic 50.0%
CTCTCTTCCACTATCGGGAT+TGG + chr3_2:63938155-63938174 None:intergenic 50.0%
AGCCCCTCACATTTATCTCG+CGG - chr3_2:63938215-63938234 Msa0416880:intron 50.0%
AGGCCGCGAGATAAATGTGA+GGG + chr3_2:63938221-63938240 None:intergenic 50.0%
TAGGCCGCGAGATAAATGTG+AGG + chr3_2:63938222-63938241 None:intergenic 50.0%
TTGGGAATCGATACCCCTAC+TGG - chr3_2:63938896-63938915 Msa0416880:intron 50.0%
TGGGAATCGATACCCCTACT+GGG - chr3_2:63938897-63938916 Msa0416880:intron 50.0%
AGAAAGGTCAAGCCCAGTAG+GGG + chr3_2:63938912-63938931 None:intergenic 50.0%
CAGAAAGGTCAAGCCCAGTA+GGG + chr3_2:63938913-63938932 None:intergenic 50.0%
TCAGAAAGGTCAAGCCCAGT+AGG + chr3_2:63938914-63938933 None:intergenic 50.0%
ATGCATCTCAAGCCGCTCTA+TGG - chr3_2:63938945-63938964 Msa0416880:intron 50.0%
TGCATCTCAAGCCGCTCTAT+GGG - chr3_2:63938946-63938965 Msa0416880:intron 50.0%
!! TTCTAGGGTTTGCCAGACCT+GGG - chr3_2:63939061-63939080 Msa0416880:intron 50.0%
!!! CTGCAATGCTGCCGTTTTGT+GGG - chr3_2:63939158-63939177 Msa0416880:intron 50.0%
TGTGGGAGGACTTTGTTGGA+AGG - chr3_2:63939175-63939194 Msa0416880:intron 50.0%
!! CCAAGAGAGTGTTTCGCACA+GGG + chr3_2:63939444-63939463 None:intergenic 50.0%
!! ACCAAGAGAGTGTTTCGCAC+AGG + chr3_2:63939445-63939464 None:intergenic 50.0%
GAATTGGCAGCCTCTTGTTC+CGG - chr3_2:63939578-63939597 Msa0416880:intron 50.0%
CATATGACACCATGACCACC+AGG + chr3_2:63939663-63939682 None:intergenic 50.0%
!! CTGGTGGTCATGGTGTCATA+TGG - chr3_2:63939661-63939680 Msa0416880:CDS 50.0%
GCTGGCACAACATTACTGCA+AGG + chr3_2:63939853-63939872 None:intergenic 50.0%
AGGAGGGTTACATCTGTAGC+TGG + chr3_2:63939871-63939890 None:intergenic 50.0%
AGCTACAGATGTAACCCTCC+TGG - chr3_2:63939870-63939889 Msa0416880:intron 50.0%
!! GATCGGTTTGCGTCAAGGAA+AGG - chr3_2:63939903-63939922 Msa0416880:intron 50.0%
! ACTTGGACTTATGGCTGGTC+CGG - chr3_2:63940291-63940310 Msa0416880:intron 50.0%
CTTCTGTTGCACCTGAGACA+CGG + chr3_2:63941059-63941078 None:intergenic 50.0%
CCATATTCCCAGTTGCCATC+TGG + chr3_2:63941111-63941130 None:intergenic 50.0%
CCAGATGGCAACTGGGAATA+TGG - chr3_2:63941108-63941127 Msa0416880:intron 50.0%
TTACCATCTGCGGAGCTTGT+TGG - chr3_2:63941910-63941929 Msa0416880:intron 50.0%
! TAATTTGCCAGCGTCTCTGG+TGG - chr3_2:63942463-63942482 Msa0416880:intron 50.0%
! AGGTGCTATAGTGGTGTGGA+AGG - chr3_2:63942544-63942563 Msa0416880:intron 50.0%
TGGAGACAAGTCTTTACGCC+AGG - chr3_2:63942730-63942749 Msa0416880:intron 50.0%
! GACACCTGATGGTGCTCTAT+TGG - chr3_2:63943148-63943167 Msa0416880:CDS 50.0%
CAGCTTCAATCTGCGACAGA+GGG + chr3_2:63943450-63943469 None:intergenic 50.0%
TCAGCTTCAATCTGCGACAG+AGG + chr3_2:63943451-63943470 None:intergenic 50.0%
GACCAAGAGCAGGATGAAGA+AGG + chr3_2:63943510-63943529 None:intergenic 50.0%
ATCCTGCTCTTGGTCCTCTT+TGG - chr3_2:63943515-63943534 Msa0416880:intron 50.0%
TCCTGCTCTTGGTCCTCTTT+GGG - chr3_2:63943516-63943535 Msa0416880:intron 50.0%
TGTCTGGTGACTTCCCAAAG+AGG + chr3_2:63943532-63943551 None:intergenic 50.0%
! AGGTTGCAGAGCTCTTTTGG+CGG - chr3_2:63944069-63944088 Msa0416880:intron 50.0%
ATTCCAGGTCAATGGAAGCC+TGG - chr3_2:63944183-63944202 Msa0416880:intron 50.0%
TTCCAAAGGCTAGGATCAGG+AGG + chr3_2:63944342-63944361 None:intergenic 50.0%
!! GAAGAGGGTATGATGGACAG+TGG - chr3_2:63945257-63945276 Msa0416880:CDS 50.0%
!! GTATGATGGACAGTGGAAGC+TGG - chr3_2:63945264-63945283 Msa0416880:CDS 50.0%
CTGTAGAAATACGCGCGACG+TGG + chr3_2:63937306-63937325 None:intergenic 55.0%
CGGAAATTGAATCCGGGAGG+TGG + chr3_2:63937349-63937368 None:intergenic 55.0%
TCGCGGCGGAAATTGAATCC+GGG + chr3_2:63937355-63937374 None:intergenic 55.0%
TGAGTCTGGTGATTTCGCGG+CGG + chr3_2:63937369-63937388 None:intergenic 55.0%
!! GGTTTTATCGACGCTGCGGT+TGG - chr3_2:63937510-63937529 Msa0416880:exon 55.0%
ATCGACGCTGCGGTTGGATT+CGG - chr3_2:63937516-63937535 Msa0416880:exon 55.0%
GGGAGAAACTATGCCGGAGA+TGG - chr3_2:63937597-63937616 Msa0416880:CDS 55.0%
TATGCCGGAGATGGAGTCGT+CGG - chr3_2:63937606-63937625 Msa0416880:CDS 55.0%
ATCACCGACGACTCCATCTC+CGG + chr3_2:63937613-63937632 None:intergenic 55.0%
! GTCGGTGATGGCTTCTGGTT+CGG - chr3_2:63937624-63937643 Msa0416880:intron 55.0%
! AGACGTTGGCGCAAGTTGAG+AGG - chr3_2:63937773-63937792 Msa0416880:CDS 55.0%
GGCCGCGAGATAAATGTGAG+GGG + chr3_2:63938220-63938239 None:intergenic 55.0%
! TCGCGACCCATTTTAGACCC+TGG + chr3_2:63938388-63938407 None:intergenic 55.0%
GCATCTCAAGCCGCTCTATG+GGG - chr3_2:63938947-63938966 Msa0416880:intron 55.0%
AGCCGCTCTATGGGGTATAG+AGG - chr3_2:63938955-63938974 Msa0416880:intron 55.0%
CAGGTCTGGCAAACCCTAGA+AGG + chr3_2:63939062-63939081 None:intergenic 55.0%
!! CTTCTAGGGTTTGCCAGACC+TGG - chr3_2:63939060-63939079 Msa0416880:intron 55.0%
CAAAACGGCAGCATTGCAGC+AGG + chr3_2:63939157-63939176 None:intergenic 55.0%
!!! GCTGCAATGCTGCCGTTTTG+TGG - chr3_2:63939157-63939176 Msa0416880:intron 55.0%
!!! CAATGCTGCCGTTTTGTGGG+AGG - chr3_2:63939161-63939180 Msa0416880:intron 55.0%
CCCTGTGCGAAACACTCTCT+TGG - chr3_2:63939441-63939460 Msa0416880:intron 55.0%
CAGCCTCTTGTTCCGGTTGT+CGG - chr3_2:63939585-63939604 Msa0416880:intron 55.0%
! CCATCTTCTGCACCGACAAC+CGG + chr3_2:63939600-63939619 None:intergenic 55.0%
CGGTTGTCGGTGCAGAAGAT+GGG - chr3_2:63939598-63939617 Msa0416880:intron 55.0%
TGCAGAAGATGGGCAGTGGT+TGG - chr3_2:63939608-63939627 Msa0416880:intron 55.0%
! GGCTTGCTCAAGGGACTGAA+CGG + chr3_2:63939642-63939661 None:intergenic 55.0%
TTCAGTCCCTTGAGCAAGCC+TGG - chr3_2:63939642-63939661 Msa0416880:CDS 55.0%
! TGACCACCAGGCTTGCTCAA+GGG + chr3_2:63939651-63939670 None:intergenic 55.0%
! ATGACCACCAGGCTTGCTCA+AGG + chr3_2:63939652-63939671 None:intergenic 55.0%
TTGAGCAAGCCTGGTGGTCA+TGG - chr3_2:63939651-63939670 Msa0416880:CDS 55.0%
GTGCAACTGTGCGCCAAGTT+AGG - chr3_2:63939739-63939758 Msa0416880:intron 55.0%
!! TAACCCTCCTGGCCTTAGCA+GGG - chr3_2:63939881-63939900 Msa0416880:intron 55.0%
ACGCAAACCGATCCCTGCTA+AGG + chr3_2:63939896-63939915 None:intergenic 55.0%
!! CAGGGCCGTTTTGAACCGAT+TGG + chr3_2:63940386-63940405 None:intergenic 55.0%
! CAATCGGTTCAAAACGGCCC+TGG - chr3_2:63940384-63940403 Msa0416880:intron 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr3_2:63940565-63940584 Msa0416880:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr3_2:63940566-63940585 Msa0416880:intron 55.0%
CGTGTCTCAGGTGCAACAGA+AGG - chr3_2:63941057-63941076 Msa0416880:intron 55.0%
GATCCAACAAGCTCCGCAGA+TGG + chr3_2:63941916-63941935 None:intergenic 55.0%
! GAGCTCTAATCCAGGCATCC+TGG + chr3_2:63942924-63942943 None:intergenic 55.0%
TCCCAAAGAGGACCAAGAGC+AGG + chr3_2:63943520-63943539 None:intergenic 55.0%
! GCTCTTTTGGCGGAATGTCC+AGG - chr3_2:63944079-63944098 Msa0416880:intron 55.0%
TGACCAGGCTTCCATTGACC+TGG + chr3_2:63944189-63944208 None:intergenic 55.0%
! TGCCTCCTGATCCTAGCCTT+TGG - chr3_2:63944337-63944356 Msa0416880:intron 55.0%
AGTCAGCACCAATGTGTGGG+TGG + chr3_2:63944630-63944649 None:intergenic 55.0%
GTTAAGAGACCTGGGCTTCC+CGG + chr3_2:63945097-63945116 None:intergenic 55.0%
CGGCGGAAATTGAATCCGGG+AGG + chr3_2:63937352-63937371 None:intergenic 60.0%
ATCACGGAGGGAGGTGAGTC+TGG + chr3_2:63937383-63937402 None:intergenic 60.0%
TGCGGCGAGCTTATCACGGA+GGG + chr3_2:63937395-63937414 None:intergenic 60.0%
ATGCGGCGAGCTTATCACGG+AGG + chr3_2:63937396-63937415 None:intergenic 60.0%
CGCATGCGGCGAGCTTATCA+CGG + chr3_2:63937399-63937418 None:intergenic 60.0%
GGAGATGGAGTCGTCGGTGA+TGG - chr3_2:63937612-63937631 Msa0416880:CDS 60.0%
! GAGTCGTCGGTGATGGCTTC+TGG - chr3_2:63937619-63937638 Msa0416880:intron 60.0%
CTGTCTGCAGAGCCTCCCAA+AGG + chr3_2:63939097-63939116 None:intergenic 60.0%
GGCAGGCATTCACCAGTGCT+AGG + chr3_2:63939136-63939155 None:intergenic 60.0%
! GCACCGACAACCGGAACAAG+AGG + chr3_2:63939591-63939610 None:intergenic 60.0%
CCGGTTGTCGGTGCAGAAGA+TGG - chr3_2:63939597-63939616 Msa0416880:intron 60.0%
TCGGTGCAGAAGATGGGCAG+TGG - chr3_2:63939604-63939623 Msa0416880:intron 60.0%
AGTCCCTTGAGCAAGCCTGG+TGG - chr3_2:63939645-63939664 Msa0416880:CDS 60.0%
!! GTAACCCTCCTGGCCTTAGC+AGG - chr3_2:63939880-63939899 Msa0416880:intron 60.0%
GATCCCTGCTAAGGCCAGGA+GGG + chr3_2:63939887-63939906 None:intergenic 60.0%
!! CTCCTGGCCTTAGCAGGGAT+CGG - chr3_2:63939886-63939905 Msa0416880:intron 60.0%
AACCGATCCCTGCTAAGGCC+AGG + chr3_2:63939891-63939910 None:intergenic 60.0%
!! GCAGGGATCGGTTTGCGTCA+AGG - chr3_2:63939898-63939917 Msa0416880:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_2:63940593-63940612 None:intergenic 60.0%
GCATCCTGTGACCGTGTCTC+AGG - chr3_2:63941045-63941064 Msa0416880:intron 60.0%
TGCACCTGAGACACGGTCAC+AGG + chr3_2:63941052-63941071 None:intergenic 60.0%
AAGATCATGCCGGGAAGCCC+AGG - chr3_2:63945085-63945104 Msa0416880:CDS 60.0%
TGGACAGTGGAAGCTGGCAC+TGG - chr3_2:63945270-63945289 Msa0416880:CDS 60.0%
GGACAGTGGAAGCTGGCACT+GGG - chr3_2:63945271-63945290 Msa0416880:CDS 60.0%
GGCGAGCTTATCACGGAGGG+AGG + chr3_2:63937392-63937411 None:intergenic 65.0%
ACGGCAGCATTGCAGCAGGC+AGG + chr3_2:63939153-63939172 None:intergenic 65.0%
CGATCCCTGCTAAGGCCAGG+AGG + chr3_2:63939888-63939907 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr3_2:63940577-63940596 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr3_2:63940578-63940597 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr3_2:63940577-63940596 Msa0416880:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr3_2:63940578-63940597 Msa0416880:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_2:63940591-63940610 Msa0416880:intron 65.0%
CAGTCTGCCACCAGAGACGC+TGG + chr3_2:63942473-63942492 None:intergenic 65.0%
CAGCGTCTCTGGTGGCAGAC+TGG - chr3_2:63942471-63942490 Msa0416880:intron 65.0%
GCTCCCGCATACGCAGGGTC+CGG - chr3_2:63940571-63940590 Msa0416880:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr3_2:63940572-63940591 Msa0416880:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr3_2:63940576-63940595 Msa0416880:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 63937106 63945760 63937106 ID=Msa0416880;Name=Msa0416880
chr3_2 mRNA 63937106 63945760 63937106 ID=Msa0416880-mRNA-1;Parent=Msa0416880;Name=Msa0416880-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|1|0.94|1|0.94|0.88|18|395|879
chr3_2 exon 63937106 63937329 63937106 ID=Msa0416880-mRNA-1:exon:14040;Parent=Msa0416880-mRNA-1
chr3_2 exon 63937352 63937635 63937352 ID=Msa0416880-mRNA-1:exon:14039;Parent=Msa0416880-mRNA-1
chr3_2 exon 63937760 63937820 63937760 ID=Msa0416880-mRNA-1:exon:14038;Parent=Msa0416880-mRNA-1
chr3_2 exon 63938302 63938464 63938302 ID=Msa0416880-mRNA-1:exon:14037;Parent=Msa0416880-mRNA-1
chr3_2 exon 63938585 63938676 63938585 ID=Msa0416880-mRNA-1:exon:14036;Parent=Msa0416880-mRNA-1
chr3_2 exon 63938766 63938840 63938766 ID=Msa0416880-mRNA-1:exon:14035;Parent=Msa0416880-mRNA-1
chr3_2 exon 63939311 63939406 63939311 ID=Msa0416880-mRNA-1:exon:14034;Parent=Msa0416880-mRNA-1
chr3_2 exon 63939640 63939717 63939640 ID=Msa0416880-mRNA-1:exon:14033;Parent=Msa0416880-mRNA-1
chr3_2 exon 63940115 63940209 63940115 ID=Msa0416880-mRNA-1:exon:14032;Parent=Msa0416880-mRNA-1
chr3_2 exon 63940301 63940392 63940301 ID=Msa0416880-mRNA-1:exon:14031;Parent=Msa0416880-mRNA-1
chr3_2 exon 63940844 63941002 63940844 ID=Msa0416880-mRNA-1:exon:14030;Parent=Msa0416880-mRNA-1
chr3_2 exon 63941670 63941833 63941670 ID=Msa0416880-mRNA-1:exon:14029;Parent=Msa0416880-mRNA-1
chr3_2 exon 63942942 63943008 63942942 ID=Msa0416880-mRNA-1:exon:14028;Parent=Msa0416880-mRNA-1
chr3_2 exon 63943106 63943278 63943106 ID=Msa0416880-mRNA-1:exon:14027;Parent=Msa0416880-mRNA-1
chr3_2 exon 63943364 63943525 63943364 ID=Msa0416880-mRNA-1:exon:14026;Parent=Msa0416880-mRNA-1
chr3_2 exon 63943650 63943799 63943650 ID=Msa0416880-mRNA-1:exon:14025;Parent=Msa0416880-mRNA-1
chr3_2 exon 63943890 63944070 63943890 ID=Msa0416880-mRNA-1:exon:14024;Parent=Msa0416880-mRNA-1
chr3_2 exon 63945042 63945760 63945042 ID=Msa0416880-mRNA-1:exon:14023;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63945042 63945760 63945042 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63943890 63944070 63943890 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63943650 63943799 63943650 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63943364 63943525 63943364 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63943106 63943278 63943106 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63942942 63943008 63942942 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63941670 63941833 63941670 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63940844 63941002 63940844 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63940301 63940392 63940301 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63940115 63940209 63940115 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63939640 63939717 63939640 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63939311 63939406 63939311 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63938766 63938840 63938766 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63938585 63938676 63938585 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63938302 63938464 63938302 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63937760 63937820 63937760 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 CDS 63937523 63937635 63937523 ID=Msa0416880-mRNA-1:cds;Parent=Msa0416880-mRNA-1
chr3_2 three_prime_UTR 63937352 63937522 63937352 ID=Msa0416880-mRNA-1:three_prime_utr;Parent=Msa0416880-mRNA-1
chr3_2 three_prime_UTR 63937106 63937329 63937106 ID=Msa0416880-mRNA-1:three_prime_utr;Parent=Msa0416880-mRNA-1
Gene Sequence

>Msa0416880

ATGCTTCACTCCACTTCACTTCTTCACCATAATCACCACCGTTTTCTCTTTTCTTTTCGTTCTAAACCTTCACTTCTAGATTCACACTCACAATCACAACCTCTCTCTTTCTCAAAATCATTATCTCTTCTTCCATCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATCATGTTGCCACGTCGCGCGTATTTCTACAGAACCATTGGAATTATCACCACCACCTCCCGGATTCAATTTCCGCCGCGAAATCACCAGACTCACCTCCCTCCGTGATAAGCTCGCCGCATGCGATACTCTCGACCAAAAGCTTCGAATCATCAACGCGGATTACAGAGTGAGACGTTTCTTCGGTTCCTCTTCCAGAAATGCTGGACTAGCTAGGGTTTTATCGACGCTGCGGTTGGATTCGGAGAATTTGTTTTTGTTGAAGTGTTTGGTAGCTGCGGGTCAAGAGCATGTGTTGTGTTCGGGAGAAACTATGCCGGAGATGGAGTCGTCGGTGATGGCTTCTGGTTCGGTGAAGAGTGCGTTTTATGCTCTGGCGAAGATGATTGAGAAGATGGATTCTGGTAATGGAAATTCTGGTGGTGGTTTTGGGATGGGTTTGGAGGATCATGAAATTCGGGAGTTGAATAAGTTGTTAGAGACGTTGGCGCAAGTTGAGAGGTTCTATGATTGCATTGGAGGAGTAATTGGTTATCAGATTATGGTTCTGGAACTTATTGTCCAACAATTGGTTGACCGGAAGAATACAAACTGGTCTCAGCACATGCACGAAGTGAAAGAAGGCCAAATTTTGGGAATCGATACCCCTACTGGGCTTGACCTTTCTGAAAATACGGAGTATGCATCTCAAGCCGCTCTATGGGGTATAGAGGGTTTGCCAGACCTGGGTGAAATTTATCCTTTGGGAGGCTCTGCAGACAGACTTGATTTAGTTGATCCTAGCACTGGTGAATGCCTGCCTGCTGCAATGCTGCCGTTTTGTGGGAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGAAAACAATGTATCACCCCTGTTGCAATAATGACAAGTTCAGCAAAGAATAACCACAAACACATCACTTCCCTGTGCGAAACACTCTCTTGGTTTGGAAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCGGTTGTCGGTGCAGAAGATGGGCAGTGGTTGGTCACTAAACCGTTCAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCAAATGGTTTTTTTGTCAAGGAAGAAAAGGTGCAACTGTGCGCCAAGTTAGTAATGTTGTGCCAGCTACAGATGTAACCCTCCTGGCCTTAGCAGGGATCGGTTTGCGTCAAGGAAAGAAACTGGGGTTCGCATCCTGTGACCGTGTCTCAGGTGCAACAGAAGGAATTAATGTACTGATGGAGAAGAAATGTCCAGATGGCAACTGGGAATATGGCGTTTCTTGCATTGAATACACTGAATTCGACAAGTTTGGGATTACTAATGGATCTCTTCCAAAAAGTTTGCAGGCAGAGTTTCCAGCTAATACAAACATCTTATATGTTGATTTACCATCTGCGGAGCTTGTTGGATCAAGTAAGAATGTGAATAGTATACCAGGAATGGTGTTAAATACAAAAAAGACAATAAATTATGTAGATCAGTTTGGAAGACATCGTAGCGTCTCTGGTGGCAGACTGGAGTGCACAATGCAAAATATAGCAGACAATTATTTCAATTCATATTCATATAGGTGCTATAGTGGTGTGGAAGATGAGCTAGATACATTTATTGTATATAATGAGCGGAGAAGGGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCTTTACGCCAGACACCTGATGGTGCTCTATTGGATATATTAAGAAACGCGCATGATCTTCTTTCACCATGTGATATAAAACTTCCCGAGATTGAAGCTGATGAGAACTACGTTTATTCAGGACCACCTTTTCTTATCCTTCTTCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACCAGACAAAAATTTTATGGTGGTTCCATATCGAAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGCTCTTTTGGCGGAATGTCCAGGTCAATGGAAGCCTGGTCATAATAGCCAAAAATGTTATGGGCTCAATGAAGATTGACGAGAGTGGTGAATCCATACTGCATCATGGACAAAGGTGTGGAAGGTGTAAATTGCAAAATGTCAAGGTGTTGAACAAGGGAATTGATTGGAGTTATGGTGGAAACGTGTATTGGAAACATGATGTGAAAAGGTCCGAGGTATTGCAGATCATACTGCATGGAAATGCTGAATTTGAAGCTACTGATGTTGTCTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGATACAAATTGAAGATCATGCCGGGAAGCCCAGGTTTAGCAATCCAGTTAGATCCGATTGAAGAGGGTATGATGGACAGTGGAAGCTGGCACTGGGATTACAAGATAGAAGGTTCTCACATTAAGCTAGAATTAGCAGAATCATAG

Protein sequence

>Msa0416880

MLHSTSLLHHNHHRFLFSFRSKPSLLDSHSQSQPLSFSKSLSLLPSSSSSSSSSSSSSSSSSSSCCHVARISTEPLELSPPPPGFNFRREITRLTSLRDKLAACDTLDQKLRIINADYRVRRFFGSSSRNAGLARVLSTLRLDSENLFLLKCLVAAGQEHVLCSGETMPEMESSVMASGSVKSAFYALAKMIEKMDSGNGNSGGGFGMGLEDHEIRELNKLLETLAQVERFYDCIGGVIGYQIMVLELIVQQLVDRKNTNWSQHMHEVKEGQILGIDTPTGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLDLVDPSTGECLPAAMLPFCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHITSLCETLSWFGRGRSTFQLFEQPLVPVVGAEDGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFKWFFCQGRKGATVRQVSNVVPATDVTLLALAGIGLRQGKKLGFASCDRVSGATEGINVLMEKKCPDGNWEYGVSCIEYTEFDKFGITNGSLPKSLQAEFPANTNILYVDLPSAELVGSSKNVNSIPGMVLNTKKTINYVDQFGRHRSVSGGRLECTMQNIADNYFNSYSYRCYSGVEDELDTFIVYNERRRVTSSAKKKRRHGDKSLRQTPDGALLDILRNAHDLLSPCDIKLPEIEADENYVYSGPPFLILLHPALGPLWEVTRQKFYGGSISKGSELQIEVAELFWRNVQVNGSLVIIAKNVMGSMKIDESGESILHHGQRCGRCKLQNVKVLNKGIDWSYGGNVYWKHDVKRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKLKIMPGSPGLAIQLDPIEEGMMDSGSWHWDYKIEGSHIKLELAES*